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DOE OSTI2024

A Science Gateway for the Repeatable Analysis of Machine Learning Predicted Gravity Anomalies

In recent years, deep learning has become an increasingly popular alternative for modeling in geoscience applications due to its scalability and efficiency. However, the interpretability, compute, data volume, and hyperparameter tuning requirements of deep learning models make development and monitoring difficult. Furthermore, model explainability and communicating results obtained by these models to users or domain experts is a challenge, as domain experts in geoscience also need to have a deep understanding of how those models function in order to support their scientific works. Here, we describe a science gateway and machine learning pipeline for predicting gravity anomalies from geophysical data. The gateway, built on open-source technologies, provides a holistic view of the pipeline through interactive visualizations aimed at enabling efficient exploratory data analysis. The repeatability, reproducibility, and monitoring capabilities of this overall system allow us to iterate and analyze at scale. Using this pipeline and gateway, we can repeatedly produce accurate high-resolution gravity anomaly datasets. By describing the underlying technologies, implementation, and results, here we provide a foundation for the broader adoption of science gateways into cross-cutting geoscience and machine learning research projects as a means to improve the scientific discovery and collaboration in the geophysics and computational sciences community.

58 GEOSCIENCES↗

NASA NTRS2014

Proto-Examples of Data Access and Visualization Components of a Potential Cloud-Based GEOSS-AI System

Once a research or application problem has been identified, one logical next step is to search for available relevant data products. Thus, an early component of a potential GEOSS-AI system, in the continuum between observations and end point research, applications, and decision making, would be one that enables transparent data discovery and access by users. Such a component might be effected via the systems data agents. Presumably, some kind of data cataloging has already been implemented, e.g., in the GEOSS Common Infrastructure (GCI). Both the agents and cataloging could also leverage existing resources external to the system. The system would have some means to accept and integrate user-contributed agents. The need or desirability for some data format internal to the system should be evaluated. Another early component would be one that facilitates browsing visualization of the data, as well as some basic analyses.Three ongoing projects at the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) provide possible proto-examples of potential data access and visualization components of a cloud-based GEOSS-AI system. 1. Reorganizing data archived as time-step arrays to point-time series (data rods), as well as leveraging the NASA Simple Subset Wizard (SSW), to significantly increase the number of data products available, at multiple NASA data centers, for production as on-the-fly (virtual) data rods. SSWs data discovery is based on OpenSearch. Both pre-generated and virtual data rods are accessible via Web services. 2. Developing Web Feature Services to publish the metadata, and expose the locations, of pre-generated and virtual data rods in the GEOSS Portal and enable direct access of the data via Web services. SSW is also leveraged to increase the availability of both NASA and non-NASA data.3.Federating NASA Giovanni (Geospatial Interactive Online Visualization and Analysis Interface), for multi-sensor data exploration, that would allow each cooperating data center, currently the NASA Distributed Active Archive Centers (DAACs), to configure its own Giovanni deployment, while also allowing all the deployments to incorporate each others data. A federated Giovanni comprises Giovanni Virtual Machines, which can be run on local servers or in the cloud.

access↗

DOE OSTI2019

Parallel streaming between heterogeneous HPC resources for real-time analysis

Performing analysis or generating visualizations concurrently with high performance simulations can yield great benefits compared to post-processing data. Writing and reading large volumes of data can be reduced or eliminated, thereby producing an I/O cost savings. One such method for concurrent simulation and analysis is in transit - streaming data from the resource running the simulation to a separate resource running the analysis. In transit analysis can be beneficial since computational resources may not have certain resources needed for visualization and analysis (e.g. GPUs) and to reduce the impact of performing analysis tasks to the run time of the simulation. When sending and receiving data in transit, data redistribution mechanisms are needed in order to support heterogeneous data layouts that may be required by the simulation and analysis applications. The work described in this paper compares two mechanisms for on-the-fly data redistribution when streaming data in parallel between two distributed memory applications. Finally, our results show that it is often more advantageous to stream data in the same layout as the sender and redistribute data amongst processes on the receiving end than to stream data in the final layout needed by the receiver.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS2011

Online Time Series Analysis of Land Products over Asia Monsoon Region via Giovanni

Time series analysis is critical to the study of land cover/land use changes and climate. Time series studies at local-to-regional scales require higher spatial resolution, such as 1km or less, data. MODIS land products of 250m to 1km resolution enable such studies. However, such MODIS land data files are distributed in 10ox10o tiles, due to large data volumes. Conducting a time series study requires downloading all tiles that include the study area for the time period of interest, and mosaicking the tiles spatially. This can be an extremely time-consuming process. In support of the Monsoon Asia Integrated Regional Study (MAIRS) program, NASA GES DISC (Goddard Earth Sciences Data and Information Services Center) has processed MODIS land products at 1 km resolution over the Asia monsoon region (0o-60oN, 60o-150oE) with a common data structure and format. The processed data have been integrated into the Giovanni system (Goddard Interactive Online Visualization ANd aNalysis Infrastructure) that enables users to explore, analyze, and download data over an area and time period of interest easily. Currently, the following regional MODIS land products are available in Giovanni: 8-day 1km land surface temperature and active fire, monthly 1km vegetation index, and yearly 0.05o, 500m land cover types. More data will be added in the near future. By combining atmospheric and oceanic data products in the Giovanni system, it is possible to do further analyses of environmental and climate changes associated with the land, ocean, and atmosphere. This presentation demonstrates exploring land products in the Giovanni system with sample case scenarios.

Shen, Suhung↗

NASA NTRS1995

The CCD/Transit Instrument (CTI) data-analysis system

The automated software system for archiving, analyzing, and interrogating data from the CCD/Transit Instrument (CTI) is described. The CTI collects up to 450 Mbytes of image-data each clear night in the form of a narrow strip of sky observed in two colors. The large data-volumes and the scientific aims of the project make it imperative that the data are analyzed within the 24-hour period following the observations. To this end a fully automatic and self evaluating software system has been developed. The data are collected from the telescope in real-time and then transported to Tucson for analysis. Verification is performed by visual inspection of random subsets of the data and obvious cosmic rays are detected and removed before permanent archival is made to the optical disc. The analysis phase is performed by a pair of linked algorithms, one operating on the absolute pixel-values and the other on the spatial derivative of the data. In this way both isolated and merged images are reliably detected in a single pass. In order to isolate the latter algorithm from the effects of noise spikes a 3x3 Hanning filter is applied to the raw data before the analysis is run. The algorithms reduce the input pixel-data to a database of measured parameters for each image which has been found. A contrast filter is applied in order to assign a detection-probability to each image and then x-y calibration and intensity calibration are performed using known reference stars in the strip. These are added to as necessary by secondary standards boot-strapped from the CTI data itself. The final stages involve merging the new data into the CTI Master-list and History-list and the automatic comparison of each new detection with a set of pre-defined templates in parameter-space to find interesting objects such as supernovae, quasars and variable stars. Each stage of the processing from verification to interesting image selection is performed under a data-logging system which both controls the pipe-lining of data through the system and records key performance monitor parameters which are built into the software. Furthermore, the data from each stage are stored in databases to facilitate evaluation, and all stages offer the facility to enter keyword-indexed free-format text into the data-logging system. In this way a large measure of certification is built into the system to provide the necessary confidence in the end results.

Cawson, M. G. M.↗

DOE OSTI2025

Reimagining Disassembly Interfaces With Visualization: Combining Instruction Tracing and Control Flow With DisViz

In applications where efficiency is critical, developers may examine their compiled binaries, seeking to understand how the compiler transformed their source code and what performance implications that transformation may have. This analysis is challenging due to the vast number of disassembled binary instructions and the many-to-many mappings between them and the source code. These problems are exacerbated as source code size increases, giving the compiler more freedom to map and disperse binary instructions across the disassembly space. Interfaces for disassembly typically display instructions as an unstructured listing or sacrifice the order of execution. Here, we design a new visual interface for disassembly code that combines execution order with control flow structure, enabling analysts to both trace through code and identify familiar aspects of the computation. Central to our approach is a novel layout of instructions grouped into basic blocks that displays a looping structure in an intuitive way. We add to this disassembly representation a unique block-based mini-map that leverages our layout and shows context across thousands of disassembly instructions. Finally, we embed our disassembly visualization in a web-based tool, DisViz, which adds dynamic linking with source code across the entire application. DizViz was developed in collaboration with program analysis experts following design study methodology and was validated through evaluation sessions with ten participants from four institutions. Participants successfully completed the evaluation tasks, hypothesized about compiler optimizations, and noted the utility of our new disassembly view. Our evaluation suggests that our new integrated view helps application developers in understanding and navigating disassembly code.

Computer science↗

NASA NTRS1993

Geologic mapping using integrated AIRSAR, AVIRIS, and TIMS data

The multi-sensor aircraft campaign called the 'Geologic Remote Sensing Field Experiment' (GRSFE), conducted during 1989 in the southwestern United States, collected multiple airborne remote sensing data sets and associated field and laboratory measurements. The GRSFE airborne data sets used in this study include the airborne Synthetic Aperture Radar (AIRSAR), the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), and the Thermal Infrared Multispectral Scanner (TIMS). Each sensor's unique characteristics were used for this study in a combined analysis scheme for geologic mapping. AIRSAR was used to map structures and landforms, AVIRIS was used to map mineralogy, and TIMS was used to map lithology. Visual data integration using IHS transforms and combined numerical analysis using derived geophysical and geologic parameters with 'multispectral' techniques resulted in improved geologic mapping over that possible using each data set individually.

Kruse, Fred A.↗

DOE OSTI2021

Scalable Comparative Visualization of Ensembles of Call Graphs

Optimizing the performance of large-scale parallel codes is critical for efficient utilization of computing resources. Code developers often explore various execution parameters, such as hardware configurations, system software choices, and application parameters, and are interested in detecting and understanding bottlenecks in different executions. They often collect hierarchical performance profiles represented as call graphs, which combine performance metrics with their execution contexts. The crucial task of exploring multiple call graphs together is tedious and challenging because of the many structural differences in the execution contexts and significant variability in the collected performance metrics (e.g., execution runtime). In this paper, we present Ensemble CallFlow to support the exploration of ensembles of call graphs using new types of visualizations, analysis, graph operations, and features. We introduce ensemble-Sankey , a new visual design that combines the strengths of resource-flow (Sankey) and box-plot visualization techniques. Whereas the resource-flow visualization can easily and intuitively describe the graphical nature of the call graph, the box plots overlaid on the nodes of Sankey convey the performance variability within the ensemble. Our interactive visual interface provides linked views to help explore ensembles of call graphs, e.g., by facilitating the analysis of structural differences, and identifying similar or distinct call graphs. Finally, we demonstrate the effectiveness and usefulness of our design through case studies on large-scale parallel codes.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS2019

New Era, New Opportunity, Is GES DISC Ready for Big Data Challenge?

The new era of Big Data has opened doors for many new opportunities, as well as new challenges, for both Earth science research/application and data communities. As one of the twelve NASA data centers - Goddard Earth Sciences Data and Information Services Center (GES DISC), one of our great challenges has been how to help research/application community efficiently (quickly and properly) accessing, visualizing and analyzing the massive and diverse data in natural hazard research, management, or even prediction. GES DISC has archived over 2000 TB data on premises and distributed over 23,000 TB of data since 2010. Our data has been widely used in every phase of natural hazard management and research, i.e. long term risk assessment and reduction, forecasting and predicting, monitoring and detection, early warning, damage assessment and response. The big data challenge is not just about data storage, but also about data discoverability and accessibility, and even more, about data migration/mirroring in the cloud. This paper is going to demonstrate GES DISC’s efforts and approaches of evolving our overall Web services and powerful Giovanni (Geospatial Interactive Online Visualization ANd aNalysis Infrastructure) tool into further improving data discoverability and accessibility. Prototype works will also be presented.

Li, A.↗

DOE OSTI2018

WebGIobe - A cloud-based geospatial analysis framework for interacting with climate data

While climate models have evolved over time to produce high fidelity and high resolution climate forecasts, visualization and analysis of the output of the model simulations has been limited, typically constrained to single dimensional charts for visualization and basic aggregate statistics for analytics. Same is true for the large troves of observational data available from meteorological stations all over the world. For richer understanding of climate and the impact of climate change, one needs computational tools that allow researchers, policymakers, and general public, to interact with the climate data. In this paper, we describe, webGlobe, a browser based GIS framework for interacting with climate data, and other datasets available in similar format. webGlobe is a unique resource that allows unprecedented access to climate data through a browser. The framework also allows for deploying machine learning based analytical applications on the climate data without putting computational burden on the client. Instead, webGlobe uses a client-server framework, where the server, deployed on a cloud infrastructure, allows for dynamic allocation of resources for running compute-intensive applications. The capabilities of the framework will be discussed in context of a use case: identifying extreme events from real and simulated climate data using a Gaussian process based change detection algorithm.

Sharma, Arun↗

DOE OSTI2022

Heterogeneous Visualization: A Call for Empirically Driven Technology Advancement and Adoption; Preprint

Our ability to generate data from simulations and experimental platforms is generally outpacing our ability to analyze those data efficiently and effectively. There are a growing number and variety of possible visualization display modalities, from commodity head-mounted displays to large-scale immersive environments, from desktop and touch displays to high-resolution display walls. Many of these visualization technologies and visual environments are rapidly evolving and could revolutionize analysis for certain classes of complex scientific and engineering data. However, the choice of what technology or combination of technologies to use has historically been largely ad hoc and lacks a carefully validated understanding of how to best utilize different visualization technologies to advance the science. To maximize the impact of our data and analyses, it is imperative that we use the most effective visualization environments for the analysis task at hand.

heterogeneous visualization↗

NASA NTRS2011

Estimating Contrail Climate Effects from Satellite Data

An automated contrail detection algorithm (CDA) is developed to exploit six of the infrared channels on the 1-km MODerate-resolution Imaging Spectroradiometer (MODIS) on the Terra and Aqua satellites. The CDA is refined and balanced using visual error analysis. It is applied to MODIS data taken by Terra and Aqua over the United States during 2006 and 2008. The results are consistent with flight track data, but differ markedly from earlier analyses. Contrail coverage is a factor of 4 less than other retrievals and the retrieved contrail optical depths and radiative forcing are smaller by approx.30%. The discrepancies appear to be due to the inability to detect wider, older contrails that comprise a significant amount of the contrail coverage. An example of applying the algorithm to MODIS data over the entire Northern Hemisphere is also presented. Overestimates of contrail coverage are apparent in some tropical regions. Methods for improving the algorithm are discussed and are to be implemented before analyzing large amounts of Northern Hemisphere data. The results should be valuable for guiding and validating climate models seeking to account for aviation effects on climate.

Minnis, Patrick↗

NASA NTRS1989

Using Patran and Supertab as pre- and postprocessors to COSMIC/NASTRAN

Patran and Supertab are interactive computer graphics pre- and postprocessors that can be used to generate NASTRAN bulk data decks and to visualize results from a NASTRAN analysis. Both of the programs are in use at the Numerical Structural Mechanics Branch of the David Taylor Research Center (DTRC). Various aspects of Patran and Supertab are discussed including: geometry modeling, finite element mesh generation, bulk data deck creation, results translation and visualization, and the user interface. Some advantages and disadvantages of both programs will be pointed out.

Lipman, Robert R.↗

DOE OSTI2017

Scaling up to address data science challenges

Statistics and Data Science provide a variety of perspectives and technical approaches for exploring and understanding Big Data. Partnerships between scientists from different fields such as statistics, machine learning, computer science, and applied mathematics can lead to innovative approaches for addressing problems involving increasingly large amounts of data in a rigorous and effective manner that takes advantage of advances in computing. Here, this article will explore various challenges in Data Science and will highlight statistical approaches that can facilitate analysis of large-scale data including sampling and data reduction methods, techniques for effective analysis and visualization of large-scale simulations, and algorithms and procedures for efficient processing.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

Alternatives to Contour Visualizations for Power Systems Data

Electrical grids are geographical and topological structures whose voltage states are challenging to represent accurately and efficiently for visual analysis. The current common practice is to use colored contour maps, yet these can misrepresent the data. We examine the suitability of four alternative visualization methods for depicting voltage data in a geographically dense distribution system - Voronoi polygons, H3 tessellations, S2 tessellations, and a network-weighted contour map. We find that Voronoi tessellations and network-weighted contour maps more accurately represent the statistical distribution of the data than regular contour maps.

MATHEMATICS AND COMPUTING,POWER TRANSMISSION AND D↗

DOE OSTI2023

Alternatives to Contour Visualizations for Power Systems Data

Electrical grids are geographical and topological structures whose voltage states are challenging to represent accurately and efficiently for visual analysis. The current common practice is to use colored contour maps, yet these can misrepresent the data. We examine the suitability of four alternative visualization methods for depicting voltage data in a geographically dense distribution system-Voronoi polygons, H3 tessellations, S2 tessellations, and a network-weighted contour map. We find that Voronoi tessellations and network-weighted contour maps more accurately represent the statistical distribution of the data than regular contour maps.

MATHEMATICS AND COMPUTING↗

NASA NTRS2007

Boundary Layer Development on a Turbine Blade in a Linear Cascade

Several different boundary-layer development patterns for flow over the suction surface of a turbine airfoil in a linear cascade were studied and documented using a sliding surface hot-film sensor. The state of the boundary layer, whether laminar, transitional or turbulent, was determined at numerous locations along the airfoil suction surface from leading to trailing edge. Boundary-layer transition from laminar to turbulent flow through laminar separation and turbulent reattachment, or through a combination of bypass transition and strong and weak separation and turbulent reattachment, or through solely bypass transition without separation, was observed and benchmark data were recorded. Surface flow visualization and numerical boundary-layer analysis results are consistent with the hot-film data. Flow and geometry information necessary for nmerical code operation is available.

Halstead, Dave↗

DOE OSTI2023

Exploring Classification of Topological Priors With Machine Learning for Feature Extraction

In many scientific endeavors, increasingly abstract representations of data allow for new interpretive methodologies and conceptualization of phenomena. For example, moving from raw imaged pixels to segmented and reconstructed objects allows researchers new insights and means to direct their studies toward relevant areas. Thus, the development of new and improved methods for segmentation remains an active area of research. With advances in machine learning and neural networks, scientists have been focused on employing deep neural networks such as U-Net to obtain pixel-level segmentations, namely, defining associations between pixels and corresponding/referent objects and gathering those objects afterward. Topological analysis, such as the use of the Morse-Smale complex to encode regions of uniform gradient flow behavior, offers an alternative approach: first, create geometric priors, and then apply machine learning to classify. This approach is empirically motivated since phenomena of interest often appear as subsets of topological priors in many applications. Using topological elements not only reduces the learning space but also introduces the ability to use learnable geometries and connectivity to aid the classification of the segmentation target. Here, in this article, we describe an approach to creating learnable topological elements, explore the application of ML techniques to classification tasks in a number of areas, and demonstrate this approach as a viable alternative to pixel-level classification, with similar accuracy, improved execution time, and requiring marginal training data.

97 MATHEMATICS AND COMPUTING↗