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NASA NTRSDate not supplied

NASA Institutional Scientific Collection and Biospecimen Sharing Program at Ames Research Center

For decades, NASA and their international partners have flown and conducted non-human biological experiments in space to understand the effects of spaceflight and address potential biological hazards. It is imperative to understand the basic science and health risks associated with spaceflight, along with developing countermeasures, as humanity ventures back to the Moon, and then to Mars and beyond. Sending organisms into space is a costly endeavor which makes space-flown biological specimens a valuable resource. To enable maximum scientific return, samples not required by the Principal Investigators are harvested, preserved and archived in NASA’s Institutional Scientific Collection (ISC) at Ames Research Center (ARC). These specimens are collected according to well-established SOPs that maintain their quality and integrity. To enable new discoveries, the samples are then made available to the international scientific community through NASA’s Biospecimen Sharing Program (BSP). The NASA ISC currently stores over 32,000 specimens from Shuttle, International Space Station and ground-based investigations. Tissues are predominantly from mice and rats, though samples are also available from bacteria and quail. The specimens include tissues from all biological systems including musculoskeletal, neurosensory, reproductive, respiratory, circulatory, and digestive and are stored at -80°C, -20°C, +4°C, or ambient. Descriptive metadata is available for all samples. Historically, these tissues have been used for a wide range of analyses, including histology, genomics, and transcriptomics. Also available through the ISC are tissue from NASA’s Space Radiation Laboratory. To study the effects of space radiation, researchers irradiate biological specimens and unused samples are made available through the LSDA. These biospecimens and data are made available through the public Life Sciences Data Archive (LSDA) website to promote basic discovery, pre-clinical and clinical science. Visit the NASA ISC-BSP website for more information.

Space Flown Biospecimens↗

NASA NTRSDate not supplied

Materials and technologies for interstellar flights and intra-galactic spread of life

Small automated spaceships are capable to deliver seeds, frozen ova and gametes to other planetary systems. A spaceship can be equipped with a freezer containing reproductive cells, an artificial uterus, a robotic nursery and school, and a collection of instruments and equipment. The whole spaceship will be frozen during a long interstellar flight. Approaching another star, a spaceship will generate electricity from light, warm up, slow down and land on a suitable planet (if any), give birth to a human, provide care and education. After schooling, the human will vacate the spaceship and either build more space for living (using local materials) or die. A vacant spaceship will supply more people, one at a time. Hopefully, they will collectively create a sustainable colony on a remote planet. Our Milky Way galaxy has hundreds billion stars (i.e., more stars than humans on Earth). Mass production of spacecrafts for intragalactic spread of life will make each spaceship cheaper, will improve employment and purposeful production on Earth, and will spread human life beyond the Solar System. If any spaceship will miss its target stellar system, it will fly to the next one, retaining ability to bring life to another planet. Which materials and technologies are needed for the interstellar life propagation? Materials age during a long interstellar flight, which can last from 10^4 to 10^10 years. We evaluate the computational methods (such as C2NEB, available from https://lib.dr.iastate.edu/ameslab_software/1) that are suitable for addressing materials aging at low temperatures and high radiation levels during the appropriately long-time scales.

Technologies↗

NASA NTRS2020

An Algorithm for Characterization of Fiber Aggregation in Composite Microstructures

Composite structures are susceptible to localized flaws, or variability, that drive global failure. To capture this variance, a multiscale model needs to be introduced that not only accurately represents the statistical nature of the composite microstructure but is also efficient. At the microscale, fiber aggregation creates local stress concentrations, where failure is likely to occur sooner than expected. A method of rapid microstructure generation, in conjunction with cluster characterization, is examined to develop accurate reproductions of 2D composite cross-sections. Parameterization of shape and size of fiber clusters is used to characterize representative volume elements. The discrete element method is used to generate pseudo-microstructures. The clustering parameters from the pseudo- and actual microstructure arrangements (obtained from micrographs) can be compared to determine the validity of the representative volume element generated with the discrete element method. Results show a promising approach to evaluating randomness of fiber distributions and how to accurately recreate microstructures for strength analysis.

Carbon fiber↗

NASA NTRS1999

Physical Model of Immune Inspired Computing

Artificial Immune System is a rapidly growing field of information processing and computing based upon immune inspired paradigns of nonlinear dynamics. This paper introduces stochastic models which mimic the phenomenology of basic functions of immune systems such as self-nonself discrimination, self-repair, predator-prey pursuit, and reproduction.

Immune↗

NASA NTRSDate not supplied

Spaceflight Biospecimen Sharing in Support of Science Discovery and Exploration

For decades, NASA and international partners have flown non-human biological experiments in space to understand the effects of spaceflight and address potential biological hazards. Sending organisms into space is a costly endeavor which makes space-flown biological specimens a valuable resource. To enable maximum scientific return, samples not required by the Principal Investigators are harvested and collected mostly by NASA’s Space Biology Biospecimen Sharing Program. These specimens are collected according to well-established SOPs that maintain quality and integrity. The specimens are then preserved, archived, and made available to the international scientific community through NASA’s Institutional Scientific Collection (ISC) at Ames Research Center (ARC). The ISC-ARC biospecimens and descriptive metadata are findable and accessible for request through the Life Sciences Data Archive (LSDA). The NASA ISC-ARC currently stores over 32,000 specimens from Shuttle, International Space Station, and ground-based investigations (spaceflight analog experiments involving either hindlimb unloading, centrifugation, or partial weight-bearing study designs). Tissues are predominantly from mice and rats, though samples are also available from bacteria and quail. The specimens include tissues from many physiological systems including musculoskeletal, neurosensory, reproductive, respiratory, circulatory, and digestive. Tissues are stored at -80°C, -20°C, +4°C, or ambient and preserved in various fixatives. Descriptive metadata is available for all samples. Historically, these tissues have been used for a wide range of analyses, including histology, genomics, and transcriptomics. Plans are underway to expand the ISC-ARC beyond the mostly-rodent contents, to include a space-relevant microbial culture collection including bacteria, fungi, and yeast. This expansion of the ISC-ARC will now involve identifying and standardizing best practices for microbial curations. To ensure safe long-term storage of microbial isolates, a microbiology laboratory will be dedicated for identification, cell culture, and lyophilization. Awarding of tissue to public science investigators has resulted in 33 publications since 2011, with 48 requests being submitted since 2016. Of note, NASA GeneLab has been awarded ISC-ARC biospecimens in the past few years. GeneLab processes the biospecimens to generate various levels of ‘omics’ data, which are published on GeneLab’s open access online platform for bioinformatics analysis and visualization. This has helped a systems biology community grow around the processed-biospecimens’ datasets, resulting in many new publications and insights. Websites: https://www.nasa.gov/ames/research/space-biosciences/isc-bsp ; https://lsda.jsc.nasa.gov/Biospecimen

Ryan T. Scott↗

NASA NTRS2021

A New Method for Simulating Photoprocesses in Astrochemical Models

We propose a new model for treating solid-phase photoprocesses in interstellar ice analogues. In this approach, photoionization and photoexcitation are included in more detail, and the production of electronically-excited (suprathermal) species is explic- itly considered. In addition, we have included non-thermal, non-diffusive chemistry to account for the low-temperature characteristic of cold cores. As an initial test of our method, we have simulated two previous experimental studies involving the UV irradiation of pure solid O2. In contrast to previous solid-state astrochemical model calculations which have used gas-phase photoabsorption cross-sections, we have em- ployed solid-state cross-sections in our calculations. This method allows the model to be tested using well-constrained experiments rather than poorly constrained gas-phase abundances in ISM regions. Our results indicate that inclusion of non-thermal reac- tions and suprathermal species allows for reproduction of low-temperature solid-phase photoprocessing that simulate interstellar ices within cold ( 10 K) dense cores such as TMC-1.

astrochemical modeling↗

NASA NTRS2021

Western Montana Ecological Forecasting: Modeling Habitat Suitability of Mustelid Species to Guide Detection Dog Surveys for Contaminants Monitoring, via Collected Scats in River Systems of Western Montana

Environmental contaminants are becoming increasingly prevalent in riverine ecosystems. The status of contaminants in western Montana’s relatively pristine river systems is largely unknown. Monitoring for heavy metals, brominated flame-retardants (BFRs), and pharmaceuticals is important due to their negative effects on ecosystems. Exposure to these contaminants can have significant endocrine, neurological, and reproductive effects. Contaminants easily travel up the food chain and bioaccumulate in apex predators. As predators with a largely aquatic diet, American mink (Mustela vison) and North American river otter (Lontra canadensis) serve as reliable indicator species of environmental health and the status of contaminants. Analysis of scat from these species is a noninvasive method to measure contaminant levels, and detection dogs from Working Dogs for Conservation (WD4C) have been used to locate these scat samples. To aid in the search of these samples, habitat suitability models were created for mink and otter for the years 2013-2020 and projected to 2040 using the random forest algorithm in the Software for Assisted Habitat Modeling (SAHM). Predictor variable data were acquired from Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), Global Precipitation Measurement Integrated Multi-satellite Retrievals for GPM (GPM IMERG), Shuttle Radar Topography Mission (SRTM), and Soil Moisture Active Passive (SMAP). Within these models, the most important variable for mink and otter habitat was distance to river. Suitable habitat also corresponded with emergent herbaceous land cover and deeper river locations. These habitat suitability models will inform sampling site section for further contaminant analysis.

Anna Winter↗

NASA NTRS2020

Maternal provisioning gives young-of-the-year Hammerheads a head start in early life

For species that do not provide parental care after birth, excess maternal provisioning during development, beyond what is required for embryogenesis, provides offspring with resources to increase their chances of survival. Maternally derived resources are expected to be important for buffering offspring against limited food resources at birth or time needed to learn how to properly feed. Young-of-the-year (YOY) cryptic Scalloped Hammerheads (Sphyrna lewini) and Carolina Hammerheads (Sphyrna gilberti) were sampled from nurseries along the US Atlantic Coast and compared for a number of biological condition metrics across three developmental stages. Large declines in liver lipid content and hepatosomatic indices were found in neonatal sharks, using umbilical scar healing as a proxy for time since birth. Feeding commenced quickly as 96% of sharks had prey remnants in their stomachs. The combination of rapid exhaustion of maternally provided resources and high occurrence of stomachs with prey contents indicate that nursery quality, with respect to prey availability, may be important for YOY hammerhead survivorship. While externally the two species are morphologically similar, longer length-at-birth in S. lewini and higher hepatic condition in neonatal S. gilberti suggest that aspects of reproductive biology, including physiology, may differ between species. While more information is needed to distinguish life history differences between these two species, data collected from YOY may serve as a useful proxy to inform management when adult samples of cryptic species are difficult to collect.

none↗

NASA NTRS2021

Methods for Recording and Documenting Ambient Environmental Sound for use in Listening Devices

The potential for implementing Advanced Air Mobility (AAM) vehicles as a viable new transportation system into communities will likely be significantly affected by the psychoacoustic impact of these new noise sources into the existing ambient soundscape. This document addresses a need within the research community for a consistent means of documenting recordings of the ambient soundscape via a metadata framework (Rizzi, et al. 2020). Such recordings can provide a cognitive context for AAM vehicle sounds, as well as a fixed condition or independent variable against which experimental manipulations of vehicle sounds can be evaluated in listening tests. This document also provides recommendations for recording and reproduction techniques of ambient sound. A brief review is made of the use of ambient recordings in prior aircraft noise studies, and of psychoacoustic motivations for its implementation is reviewed from the fields of soundscape, auditory scene analysis, and time-varying partial specific loudness research.

urban air mobility↗

NASA NTRSDate not supplied

Bion-M2

Bion-M2, scheduled to launch in April 2023, continues the 30+ year collaboration between the Institute of Biomedical Problems of the Russian Academy of Sciences (IBMP RAS) and the National Aeronautics and Space Administration (NASA). Bion-M2 is the second biosatellite in the Bion-M series and its goal is to investigate how the space environment affects living organisms, with emphasis on physiological changes in rodents, gravitational biology using a wide variety of specimens, and radiation biology. The Bion-M2 biosatellite will complete a 30-day low earth orbit (LEO) flight to study the combined effects of microgravity and ionizing radiation (IR) on multiple organisms, where the payload may be exposed to IR at 20-30 times thedose rate seen on the International Space Station. Following return, nine U.S. collaborators selected through the NASA Space Biology Research Announcement will conduct post-flight rodent experiments using male C57BL/6 mice. The post-flight experiments will investigate the effects of the space environment on bone and skeletal muscle health, cardiac function, reproductive system function, neurovascular systems, protein composition in plasma, and thermoregulation in the mice. Currently, the Bion-M2 mission is in the development phase of theproject lifecycle. The mission objectives, constraints, requirements, and timeline have been defined in the project plan and contracts. Technology for the mission is under development and science procedures will be finalized by FY22. The aim of this presentation is to highlight the importance of the Bion-M2 mission and provide insight into the mission development process, including an overview of the project plan and the tissue sharing plan that will be utilized during the post-flight dissection procedures.

Bion-M2↗

NASA NTRSDate not supplied

Voxel Based Three-Dimensional Topology Optimization of Heat Exchanger Fins

Increasing interest in novel aircraft propulsion systems and potential for unwanted heat generation, or capture and reuse of waste heat, may require increasingly lightweight and high performing heat exchangers. Advances in manufacturing technologies have shown potential to create complex designs, but design tools need more flexibility. This study utilizes genetic algorithm-driven topology optimization to develop high performance heat exchanger fins for critical applications such as aerospace. The solid domain is generated using voxel representation where a voxel value of 1 indicates the solid domain and a voxel value of 0 refers to the fluid domain. The use of voxel representation somewhat matches the digitization of a model that is required to fabricate using additive manufacturing, and also allows for a highly unconstrained geometry. To test the topology optimization approach, a three-dimensional(3D)baseline offset strip fin geometry in steady laminar flow(Reynolds number = 215)with conjugate heat transfer(simultaneous solution of solid and fluid temperature fields)is optimized. New designs are generated using the genetic algorithm (GA) and sent to evaluation by the CFD software OpenFOAM; then the GA sorts and selects the reproduction pool for the following generation. This process is repeated for 60 generations. The study also investigates the effect off in material on the performance of the GA and the resulting designs. The results show that the optimal designs have overall performance improvement of 18% relative to the baseline. Additionally, a fin constructed of a lower conductivity material (such as an Inconel super alloy that might be necessary for waste heat recovery applications)results in lower overall performance improvement (11%)and optimal designs with higher pressure drop relative to their baseline, and relative to optimal designs produced using higher conductivity materials.

3D Optimization↗

NASA NTRS2022

Western Montana Ecological Forecasting II: Enhancing Habitat Suitability Modeling of Mustelid Species and Contaminant Monitoring in Northern Montana Using NASA Earth Observations

Environmental contaminants in aquatic ecosystems threaten both human and ecosystem health. Western Montana’s rivers possess great economic and ecological value, yet the status of contaminants in these systems can be unclear. Contaminants such as brominated flame-retardants, heavy metals, and pharmaceuticals negatively affect ecosystem health by traveling through the food chain and bioaccumulating in apex predators. Exposure to these contaminants can result in neurological, endocrine, and reproductive impairments in wildlife and humans. American mink (Neovison vison) and North American river otter (Lontra canadensis) have a predominantly aquatic diet and serve as reliable indicator species of environmental health. Working Dogs for Conservation (WD4C) uses detection dogs to locate scat samples of these species which are assessed for contaminants by the Virginia Institute of Marine Science (VIMS). With Software for Assisted Habitat Modeling (SAHM), the team generated current (2013-2020) and projected (2021-2040) habitat suitability models for mink and otter utilizing NASA Earth observations from Terra Moderate Resolution Imaging Spectroradiometer (MODIS), Global Precipitation Measurement Integrated Multi-Satellite Retrievals for GPM (GPM IMERG), Shuttle Radar Topography Mission (SRTM), and Soil Moisture Active Passive (SMAP). The habitat suitability maps’ study region encompassed Flathead National Forest and Blackfeet Indian Reservation. Additionally, the team created site accessibility and precipitation anomaly maps that display the viability of survey locations. The current habitat suitability models performed well (AUC-PR=0.88). The most important predictor variables for suitable habitat were distance to rivers, elevation, and land cover. These end products will further inform WD4C survey site selection and contaminant monitoring.

Chelsea Morton↗

NASA NTRS2021

Rodent Research in Space: A Decadal Research Campaign

Studying the physiological effects of spaceflight in rodents is imperative to our understanding of adaptation and to providing countermeasures. We posit that studies of the reproductive system, development, stem cells, and behavior/cognition are critically important and provide outstanding opportunities as these are sentinel tissues and systems for radiation exposure and overall health. To improve understanding of the environmental stressors (weightlessness, space radiation, isolation/confinement) that impact space travelers, rodent research should be continued within and extended beyond LEO.

rodent research spaceflight↗

NASA NTRSDate not supplied

Sensitivity Study of Dust-Laden Flows in the DLR GBK Facility using the DUST-US3D Framework

The current work is aimed at performing a detailed numerical sensitivity study of dust-laden flow through the DLR GBK facility using the DUST-US3D frame-work. A three-dimensional volumetric grid of the GBK facility with emphasis on a precise reproduction of the dust particle injection process and the transit of particles through the facility has been developed for this work. The sensitivity study on this grid involves varying particle injection parameters such as the diameter distribution probability function, input velocity magnitude, and input velocity direction and accounting for particle-particle collisions. The resulting impact on particle-related statistics such as the dust mass flow rate is studied, and comparisons made to experimental data.

Dusty Flows↗

NASA NTRS2020

Connecting Users and Applications with Po.daac Hosted GHRSST Data

The 80+ GHRSST public datasets represent a rich resource for sea surface temperature research and applications given their time series length, resolution, spatial coverage, varying measurement types and processing levels, and availability in the full spectrum of PO.DAAC tools and services ecosystem. The PO.DAAC has created a publicly accessible recipe suite for the user community to perform straightforward yet powerful computations on GHRSST data using python recipes, Jupyter notebooks, R, Matlab, and the NCO programming language. These recipes include numerical computations for regional and global SST trends, anomaly derivations, EOF analysis, climate signal reproduction, and ocean phenology. For example, one recipe reproduces a famous SST based warming figure from the Fourth National Climate Assessment (USA) while another focuses on quantifying the regional changes in ocean SST phenology. Most are python-based while some contain hybrid calls and leverage the NCO programming interface too. All are available on the PO.DAAC user forum (https://podaac.jpl.nasa.gov/forum/) and/or via the open source NASA GitHub repository (https://github.com/nasa/podaac_tools_and_services). Several are available in the Jupyter notebook framework including podaacypy (https://github.com/nasa/podaacpy), a recipe for GHRSST granule metadata discovery and application, and more recently a Jupyter notebook developed to support data analysis and visualization of a cloud-based Zarr formatted Level 4 MUR dataset in the AWS Open Data Registry. Throughout the summer of 2020, the PO.DAAC intends to add and migrate more of its numerical recipes to the Jupyter notebook framework and publish them on its open source GitHub repository.

Gentemann, Chelle↗

NASA NTRS2022

HYPERFIRE

The two main sub-scale, ground-based rocket aerodynamics testing techniques – hot-fire testing and cold-flow testing – pose a series of tradeoffs. Hot-fire testing is generally much more accurate, but is often burdensome, costly, and requires long lead times due to design work, infrastructure preparation, etc. Cold-flow testing is much less expensive and has a rapid turnaround time, but conventional simulants (e.g., nitrogen, steam) used in cold-flow testing yield less accurate results (i.e., results that are not sufficiently representative of test article performance). While researching methods to optimize such tradeoffs, engineers at NASA’s Stennis Space Center discovered that ethane can be tuned to approximate rocket exhaust plumes generated by several common rocket propellants. This led NASA to develop the HYdrocarbon Propellants Enabling Reproduction of Flows in Rocket Engines (HYPERFIRE), a sub-scale, non-reacting flow test system. HYPERFIRE uses heated ethane to enable physical simulation of rocket engines powered by a broad range of propellants in an inexpensive, accurate, and simple fashion.

sub-scale↗

NASA NTRS2021

What it Takes to Compute Highly Accurate Rovibrational Line Lists for Use in Astrochemistry

We review the Best Theory + Reliable High-resolution Experiment (BTRHE) strategy for obtaining highly accurate molecular rovibrational line lists with InfraRed (IR) intensities. The need for highly accurate molecular rovibrational line lists is two-fold: a) assignment of the many rovibrational lines for common stable molecules especially those that exhibit a large amplitude motion, such as NH3, or have a high density of states such as SO2; and b) characterization of the atmospheres of exoplanets which will be one of the main areas of research in astronomy in the coming decades. The first motivation arises due to the need to eliminate lines due to common molecules in an astronomical observation in order to identify lines from new molecules, while the second motivation arises due to the need to obtain accurate molecular opacities in order to characterize the atmosphere of an exoplanet. The BTRHE strategy first consists of using high quality ab initio quantum chemical methods to obtain a global potential energy surface (PES) and dipole moment surface (DMS) that contains the proper physics. The global PES is then refined using a subset of the reliable high-resolution experimental data. The refined PES then gives energy level predictions to an accuracy similar to the reproduction accuracy of the experimental data used in the refinement step in the interpolation region (i.e., within the range of the experimental data used in the refinement step). The accuracy of the energy levels will slowly degrade as they are extrapolated to spectral regions beyond the high-resolution experimental data used in the refinement step. However, because the degradation is slow, the predicted energy levels can be used to assign new high-resolution experiments, and the data from these can then be used in a subsequent refinement step. In this way, the global PES eventually can yield highly accurate energy levels for all desired spectral regions including to very high energies and high J values. We show that IR intensities computed with the BTRHE rovibrational wavefunctions and the DMS can be very accurate provided one has minimized the fitting error of the DMS and tested the completeness of the DMS. Some examples of our work on NH3, CO2, and SO2 are given to highlight the usefulness of the BTRHE strategy and to provide ideas on how to further improve its predictive power in the future. In particular, it is shown how successive refinement steps, once new high-resolution data is available, can lead to PESs that yield highly accurate transition energies to larger spectral regions. The importance of including non-adiabatic corrections to reduce the J-dependence of errors for H-containing molecules is shown with work on NH3. Another very important aspect of the BTRHE approach is the consistency across isotopologues, which allows for highly accurate line lists for any isotopologue once one is obtained for the main isotopologue (which has more high-resolution data available for refinement).

Xinchuan Huang↗

NASA NTRSDate not supplied

Residence Time and Trajectory as Constraints on Cloud-Based Habitability

Rocky, geologically active worlds with water, including Venus, are often considered potential origins for Earthlike biochemistries. They are also some of the likeliest worlds to have clouds.Yet the requirements for cloud habitability – the potential for aerobiospheres – is rarely studied. Earth's clouds carry significant numbers of active microbes (Amato et al., 2017), which affect planetary weather(as condensation and ice nuclei), climate (alteration of cloud and surface albedo), and water and air chemistry (through metabolic processing) (Delort et al., 2010).However, we have not yet observed airborne microbial reproduction in the field, and one likely reason is that microbes suspended in clouds on Earth have residence times at best equivalent to typical generation times – hours to days.

Residence↗