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At least 595 records · Page 33

ColorMap ND : A Data-Driven Approach and Tool for Mapping Multivariate Data to Color

A wide variety of color schemes have been devised for mapping scalar data to color. We address the challenge of color-mapping multivariate data. While a number of methods can map low-dimensional data to color, for example, using bilinear or barycentric interpolation for two or three variables, these methods do not scale to higher data dimensions. Likewise, schemes that take a more artistic approach through color mixing and the like also face limits when it comes to the number of variables they can encode. Our approach does not have these limitations. It is data driven in that it determines a proper and consistent color map from first embedding the data samples into a circular interactive multivariate color mapping display (ICD) and then fusing this display with a convex (CIE HCL) color space. The variables (data attributes) are arranged in terms of their similarity and mapped to the ICD’s boundary to control the embedding. Using this layout, the color of a multivariate data sample is then obtained via modified generalized barycentric coordinate interpolation of the map. In conclusion, the system we devised has facilities for contrast and feature enhancement, supports both regular and irregular grids, can deal with multi-field as well as multispectral data, and can produce heat maps, choropleth maps, and diagrams such as scatterplots.

97 MATHEMATICS AND COMPUTING↗

Abnormal Transport and Magnetic Properties Induced by Change of the Phase Volume Ratio for YBa{sub 2}Cu{sub 3}O{sub 7-δ}/La{sub 0.67}Sr{sub 0.33}MnO{sub 3} Hybrids

Two elaborately designed hybrids consisting of superconducting YBa{sub 2}Cu{sub 3}O{sub 7-δ} (YBCO) and ferromagnetic La{sub 0.67}Sr{sub 0.33}MnO{sub 3} (LSMO), namely 20 × (YBCO(m)/LSMO(100 − m)) are prepared on single crystal SrTiO{sub 3} (STO) by pulsed laser deposition (PLD) with 20 being repetition periods and m = 90 and 10, respectively, which represents YBCO pulse number in a period. The films show highly c-oriented and epitaxial quality, suggested by XRD 𝜃–2𝜃 scans and pole figures. The 20 × (YBCO90/LSMO10) sample with a large YBCO volume fraction exhibits the typical character of a metal superconductor at about 90 K, while its transition width reaches 9.1 K, which is nearly eight times of that of the pure YBCO film. Above the superconducting transition temperature, a superparamagnetic signal rather than ferromagnetic behavior is observed, which may be associated with a diluted system consisting of the ferromagnetic nanoparticles embedded in the superconducting films. For the hybrid with a small YBCO volume fraction, i.e., the 20 × (YBCO10/LSMO90) sample, its transport behavior at normal state is insulating, and it is found that the Mott variable range hopping conduction dominates in this insulating phase in the temperature range 70–310 K. Obviously distinguishable insulator to superconductor (IS) transition occurs at 52 K, but the superconducting diamagnetic signals are very weak in the magnetic measurements below the IS temperature. For this sample, the magnetization loop at 100 K is ferromagnetic, yet manifested by a reduced coercive field and residual magnetization as compared with a pure LSMO film. In fact, both hybrids represent two kinds of nanocomposites, i.e., superconducting nanoparticles in a ferromagnetic matrix and ferromagnetic nanoparticles in a superconducting matrix, which benefits to study interfacial interactions due to an increased interface to value ratio and reduced size effect.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Leaf chlorophyll content as a proxy for leaf photosynthetic capacity

Improving the accuracy of estimates of forest carbon exchange is a central priority for understanding ecosystem response to increased atmospheric CO 2 levels and improving carbon cycle modelling. However, the spatially continuous parameterization of photosynthetic capacity (Vcmax) at global scales and appropriate temporal intervals within terrestrial biosphere models (TBMs) remains unresolved. This research investigates the use of biochemical parameters for modelling leaf photosynthetic capacity within a deciduous forest. Particular attention is given to the impacts of seasonality on both leaf biophysical variables and physiological processes, and their interdependent relationships. Four deciduous tree species were sampled across three growing seasons (2013-2015), approximately every 10 days for leaf chlorophyll content (Chl Leaf ) and canopy structure. Leaf nitrogen (N Area ) was also measured during 2014. Leaf photosynthesis was measured during 2014-2015 using a Li-6400 gas-exchange system, with A-Ci curves to model Vcmax. Results showed that seasonality and variations between species resulted in weak relationships between Vcmax normalized to 25°C (Vcmax 25 ) and N Area ( R 2 = 0.62, P < 0.001), whereas Chl Leaf demonstrated a much stronger correlation with Vcmax 25 ( R 2 = 0.78, P < 0.001). The relationship between Chl Leaf and N Area was also weak ( R 2 = 0.47, P < 0.001), possibly due to the dynamic partitioning of nitrogen, between and within photosynthetic and nonphotosynthetic fractions. The spatial and temporal variability of Vcmax 25 was mapped using Landsat TM/ETM satellite data across the forest site, using physical models to derive Chl Leaf . TBMs largely treat photosynthetic parameters as either fixed constants or varying according to leaf nitrogen content. This research challenges assumptions that simple N Area - Vcmax 25 relationships can reliably be used to constrain photosynthetic capacity in TBMs, even within the same plant functional type. It is suggested that Chl Leaf provides a more accurate, direct proxy for Vcmax 25 and is also more easily retrievable from satellite data. These results have important implications for carbon modelling within deciduous ecosystems.

59 BASIC BIOLOGICAL SCIENCES↗

Three Dimensional Variable-Wavelength X-Ray Bragg Coherent Diffraction Imaging

Here, we present and demonstrate a formalism by which three-dimensional (3D) Bragg x-ray coherent diffraction imaging (BCDI) can be implemented without moving the sample by scanning the energy of the incident x-ray beam. This capability is made possible by introducing a 3D Fourier transform that accounts for x-ray wavelength variability. We also demonstrate the approach by inverting coherent Bragg diffraction patterns from a gold nanocrystal measured with an x-ray energy scan. Furthermore, variable-wavelength BCDI will expand the breadth of feasible in situ 3D strain imaging experiments towards more diverse materials environments, especially where sample manipulation is difficult.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Lead exposure to children from consumption of backyard chicken eggs

Highlights: • Backyard chicken eggs from most households providing egg samples (98%) contained detectable concentrations of lead. • IIn prediction models, backyard egg consumption increased overall blood lead levels in children • Infants < 1 year of age experience the greatest increase in predicted blood lead levels from backyard egg consumption. • Mean household egg lead concentration was strongly positively correlated with coop soil lead concentrations. Backyard chicken ownership is rapidly increasing in urban areas in the United States, largely as a way to provide eggs for household consumption. Despite elevated levels of environmental lead contamination in many US cities, the role of backyard chicken eggs as a pathway for lead exposure, particularly for children, has received limited scrutiny. To characterize lead exposure from consumption of backyard chicken eggs for children and predict related effects on blood lead level (BLL), we conducted a cross-sectional study of backyard chicken owners in the Greater Boston area (n = 51). We interviewed participants regarding egg consumption by household members and collected backyard eggs (n = 201) and coop soil samples (n = 48) for analysis. Inductively coupled plasma mass spectrometry (ICP-MS) was used to evaluate lead concentration in homogenized eggs and an X-ray fluorescence (XRF) portable device was used to assess soil lead levels in the laboratory. We used the USEPA's Integrated Exposure Uptake Biokinetic Model for Lead in Children (IEUBK) to assess the relative contribution of backyard egg consumption to aggregate BLL in children. Four scenarios were developed in the IEUBK model to address variability in egg consumption rates and egg lead contamination. Lead was detected in egg samples from 98% of the households that provided egg samples. Mean household lead concentration was 0.10 μg/g (SD: 0.18). Egg lead concentrations ranged from below the limit of detection (0.0014 μg/g) to 1.798 μg/g (<1.4–1198 ppb). Egg lead levels were strongly positively correlated with lead concentration in coop soil (r = 0.64; p < 0.001). In modeled scenarios where a child < 7 years frequently ate eggs highly contaminated with lead, BLLs are predicted to increase by 0.9–1.5 μg/dL. In three other scenarios reflecting more moderate egg lead contamination and consumption rates, BLLs were predicted to increase from 0.1 to 0.8 μg/dL. Consumption of backyard chicken eggs can contribute to lead exposure in children. Soil lead remediation prior to chicken ownership may reduce lead exposure from backyard eggs.

54 ENVIRONMENTAL SCIENCES↗

Summertime Aerosol across the North Slope of Alaska Field Campaign Report

The Summertime Aerosol across the North Slope of Alaska U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facility field campaign, a collaborative effort between the University of Michigan and Baylor University, was focused on chemically characterizing sources of summertime aerosol impacting the Utqiagvik (Barrow, NSA) and the Oliktok Point (AMF3) ARM sites. This campaign was co-funded by a grant from the National Oceanic and Atmospheric Administration (NOAA, PI: Kerri Pratt, Co-I: Rebecca Sheesley) titled “Assessment of Atmospheric Aerosols Resulting from Oil and Gas Extraction Activities near the North Slope of Alaska”. The ARM field campaign took place on the North Slope of Alaska (NSA) from August 21 to September 30, 2015 and August 12 to September 20, 2016, with filter sampling occurring both years at both the NSA Barrow and AMF3 Oliktok Point sites. Online intensive measurements occurred at Barrow in 2015 and at Oliktok Point in 2016, coordinated with the arrival of the ARM Aerosol Observing System (AOS) in August 2016 at Oliktok Point. During 2015, the University of Michigan deployed the newly constructed aerosol time-of-flight mass spectrometer (ATOFMS), as well as a microanalysis particle sampler (MPS) to collect particles for offline analysis by computer-controlled scanning electron microscopy with energy-dispersive x-ray spectroscopy (CCSEM-EDX). Unfortunately, an issue with the time-of-flight mass spectrometer on the ATOFMS limited the number of particles that produced mass spectra during the 2015 study. This issue was subsequently fixed for the 2016 deployment. During 2016, the ATOFMS was deployed to the AMF3 at the Oliktok Point field site, in addition to a micro-orifice uniform deposition impactor (MOUDI) to collect particles for offline analysis by CCSEM-EDX. Notably, these measurements, to our knowledge, represent the first real-time, single-particle chemical characterization (aerosol mixing state) measurements at Utqiagvik and Oliktok Point. Online aerosol measurements also included: PM2.5 (particulate matter <2.5 μm) black carbon mass concentrations (aethalometer; Baylor) and size-resolved (0.013-20 μm) number concentrations (scanning mobility particle sizer, SMPS, and aerodynamic particle sizer, APS; Michigan). Baylor conducted filter sampling at both the Utqiagvik and Oliktok Point locations during both intensive operational periods (IOPs). Baylor deployed a total suspended particulate matter (TSP) sampler to Oliktok Point, and continuous one-week samples were collected in 2015 for a total of seven samples; during 2016, continuous 3-7 day samples were collected, for a total of 13 filters. Baylor deployed a TSP sampler and a PM1.0 sampler at Utqiagvik, Alaska; continuous 4-7 day filter samples were collected in 2015 for a total of eight samples. To supplement this campaign, PI Sheesley had a simultaneous DOE ARM field campaign at Utqiagvik and Oliktok Point (https://www.arm.gov/research/ campaigns/amf2016bbc), the goal of which was to collected continuous one-week TSP samples at both sites from June 2016 to September 2017. These results provide better context in terms of annual trends and for year-to-year variability and a final report with data was already submitted by PI Sheesley for that project. Analysis by Baylor focuses on TSP samples because of the extremely low PM loading on the PM1.0 sampler. Michigan deployed a three-stage impactor (0.07-5 μm PM collection) at Utqiagvik and a 10-stage impactor (0.056-10 μm PM collection) at Oliktok Point, during the 2015 and 2016 campaigns, respectively.

Arctic processes, North Slope of Alaska, Barrow, O↗

Difficult-to-neutralize global HIV-1 isolates are neutralized by antibodies targeting open envelope conformations

Abstract The HIV-1 envelope (Env) is the target for neutralizing antibodies and exists on the surface of virions in open or closed conformations. Difficult-to-neutralize viruses (tier 2) express Env in a closed conformation antigenic for broadly neutralizing antibodies (bnAbs) but not for third variable region (V3) antibodies. Here we show that select V3 macaque antibodies elicited by Env vaccination can neutralize 26% of otherwise tier 2 HIV-1 isolates in standardized virus panels. The V3 antibodies only bound to Env in its open conformation. Thus, Envs on tier 2 viruses sample a state where the V3 loop is not in its closed conformation position. Envelope second variable region length, glycosylation sites and V3 amino acids were signatures of neutralization sensitivity. This study determined that open conformations of Env with V3 exposed are present on a subset of otherwise neutralization-resistant virions, therefore neutralization of tier 2 HIV-1 does not always indicate bnAb induction.

59 BASIC BIOLOGICAL SCIENCES↗

Data for: Patel et al. Carbon flux estimates are sensitive to data source: A comparison of field and lab temperature sensitivity data

This dataset contains data and code used for the paper "Carbon flux estimates are sensitive to data source: A comparison of field and lab temperature sensitivity data" [DOI COMING SOON]A large literature exists on mechanisms driving soil production of the greenhouse gases CO2 and CH4. Measurements of these gases’ fluxes are often performed using closed-chamber incubations in the laboratory or in situ, i.e., in the field. Although it is common knowledge that measurements obtained through field studies vs. laboratory incubations can diverge because of the vastly different conditions of these environments, few studies have systematically examined these patterns. It is crucial to understand the magnitude and reasons for any differences, as these data are used to parametrize and benchmark ecosystem- to global-scale models, which are then susceptible to the biases of the source data. Here, we specifically examine how greenhouse gas measurements may be influenced by whether the measurement/incubation was conducted in the field vs. laboratory, focusing on CO2 and CH4 measurements. We use Q10 of greenhouse gas flux (temperature sensitivity) for our analyses, because of the ubiquity of this metric in biological and Earth system sciences and its importance to many modeling frameworks. We predicted that laboratory measurements would be less variable, but also less representative of true field conditions. However, there was greater variability in the Q10 values calculated from lab-based measurements of CO2 fluxes, because lab experiments explore extremes rarely seen in situ, and reflect the physical and chemical disturbances occurring during sampling, transport, and incubation. Overall, respiration Q10 values were significantly greater in laboratory incubations (mean = 4.19) than field measurements (mean = 3.05), with strong influences of incubation temperature and climate region/biome. However, this was in part because field measurements typically represent total respiration (Rs), whereas lab incubations typically represent heterotrophic respiration (Rh), making direct comparisons difficult to interpret. Focusing only on Rh-derived Q10, these values showed almost identical distributions across laboratory (n = 1110) and field (n = 581) experiments, providing strong support for using the former as an experimental proxy for the latter, although we caution that geographic biases in the extant data make this conclusion tentative. Due to a smaller sample size of CH4 Q10 data, we were unable to perform a comparable robust analysis, but we expect similar interactions with soil temperature, moisture, and environmental/climatic variables. Our results here suggest the need for more concerted efforts to document and standardize these data, including sample and site metadata. This dataset contains a compressed (.zip) archive of the data and R scripts used for this manuscript. The dataset includes files in .csv format, which can be accessed and processed using MS Excel or R. This archive can also be accessed on GitHub at https://github.com/kaizadp/field_lab_q10 (DOI: 10.5281/zenodo.7106554).

54 ENVIRONMENTAL SCIENCES↗

Measurement of the top quark forward-backward production asymmetry and the anomalous chromoelectric and chromomagnetic moments in pp collisions at $ \sqrt{s} $ = 13 TeV

AbstractThe parton-level top quark (t) forward-backward asymmetry and the anomalous chromoelectric $ \left({\hat{d}}_{\mathrm{t}}\right) $ and chromomagnetic $ \left({\hat{\mu}}_{\mathrm{t}}\right) $ moments have been measured using LHC pp collisions at a center-of-mass energy of 13 TeV, collected in the CMS detector in a data sample corresponding to an integrated luminosity of 35.9 fb$^{−1}$. The linearized variable $ {A}_{\mathrm{FB}}^{(1)} $ is used to approximate the asymmetry. Candidate $ \mathrm{t}\overline{\mathrm{t}} $ events decaying to a muon or electron and jets in final states with low and high Lorentz boosts are selected and reconstructed using a fit of the kinematic distributions of the decay products to those expected for $ \mathrm{t}\overline{\mathrm{t}} $ final states. The values found for the parameters are $ {A}_{\mathrm{FB}}^{(1)}={0.048}_{-0.087}^{+0.095}{\left(\mathrm{stat}\right)}_{-0.029}^{+0.020}\left(\mathrm{syst}\right),{\hat{\mu}}_{\mathrm{t}}=-{0.024}_{-0.009}^{+0.013}{\left(\mathrm{stat}\right)}_{-0.011}^{+0.016}\left(\mathrm{syst}\right), $ and a limit is placed on the magnitude of $ \left|{\hat{d}}_{\mathrm{t}}\right| $< 0.03 at 95% confidence level.[graphic not available: see fulltext]

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Urinary microRNAs as potential biomarkers of pesticide exposure

MicroRNAs (miRNAs) are post-transcriptional regulators that silence messenger RNAs. Because miRNAs are stable at room temperature and long-lived, they have been proposed as molecular biomarkers to monitor disease and exposure status. While urinary miRNAs have been used clinically as potential diagnostic markers for kidney and bladder cancers and other diseases, their utility in non-clinical settings has yet to be fully developed. Our goal was to investigate the potential for urinary miRNAs to act as biomarkers of pesticide exposure and early biological response by identifying the miRNAs present in urine from 27 parent/child, farmworker/non-farmworker pairs (16FW/11NFW) collected during two agricultural seasons (thinning and post-harvest) and characterizing the between- and within-individual variability of these miRNA epigenetic regulators. MiRNAs were isolated from archived urine samples and identified using PCR arrays. Comparisons were made between age, households, season, and occupation. Of 384 miRNAs investigated, 297 (77%) were detectable in at least one sample. Seven miRNAs were detected in at least 50% of the samples, and one miRNA was present in 96% of the samples. Principal components and hierarchical clustering analyses indicate significant differences in miRNA profiles between farmworker and non-farmworker adults as well as between seasons. Six miRNAs were observed to be positively associated with farmworkers status during the post-harvest season. Expression of five of these miRNA trended towards a positive dose response relationship with organophosphate pesticide metabolites in farmworkers. These results suggest that miRNAs may be novel biomarkers of pesticide exposure and early biological response. - Highlights: • A novel method to identify microRNA biomarkers in urinary samples is proposed. • Six miRNAs have been identified as associated with occupational farm work and pesticide exposure. • An observed seasonal difference suggests transient characteristics of urinary miRNAs.

60 APPLIED LIFE SCIENCES↗

Extended live-tracking and quantitative characterization of wound healing and cell migration with SiR-Hoechst

Highlights: • SiR-Hoechst is a nuclear dye that enables cell tracking without affecting migration. • Single cell analysis provides multiple migration metrics during wound healing. • Cell density-based report of wound healing is less susceptible to subjective bias. • Cell directionality is an important contributor of early wound recovery. Cell migration is essential to many life processes, including immune response, tissue repair, and cancer progression. A reliable quantitative characterization of the cell migration can therefore aid in the high throughput screening of drug efficacy in wound healing and cancer treatments. In this work, we report what we believe is the first use of SiR-Hoechst for extended live tracking and automated analysis of cell migration and wound healing. We showed through rigorous statistical comparisons that this far-red label does not affect migratory behavior. We observed excellent automated tracking of random cell migration, in which the motility parameters (speed, displacement, path length, directionality ratio, persistence time, and direction autocorrelation) obtained closely match those obtained from manual tracking. We also present an analysis framework to characterize the healing of a scratch wound from the perspective of single cells. The use of SiR-Hoechst is advantageous for the crowded environments in wound healing assays because as long as cell nuclei do not overlap, continuous tracking can be maintained even if there is cell-cell contact. In this paper, we report wound recovery based on the number of cells migrating into the wound over time, normalized by the initial cell count prior to the infliction of the wound. This normalized cell count approach is impervious to operator bias during the arbitration of wound edges and is also robust against variability that arises due to differences in the cell density of different samples. Additional wound healing characteristics were also defined based on the evolution of cell speed and directionality during healing. Not unexpected, the wound healing cells exhibited much higher tendency to maintain the same migratory direction in comparison to the randomly migrating cells. The use of SiR-Hoechst thus greatly simplified the automation of single cell and whole population analysis with high spatial and temporal resolution over extended periods of time.

60 APPLIED LIFE SCIENCES↗

Investigating Thaw and Plant Productivity Constraints on Old Soil Carbon Respiration From Permafrost

Isotopic radiocarbon (Δ 14 C) signatures of ecosystem respiration (Reco) can identify old soil carbon (C) loss and serve as an early indicator of permafrost destabilization in a warming climate. Warming also stimulates plant productivity causing plant respiration to dominate Reco Δ 14 C signatures and potentially obscuring old soil C loss. Here, we investigate how a wide spatio-temporal gradient of permafrost thaw and plant productivity affects Reco Δ 14 C patterns and isotopic partitioning. Spatial gradients came from a warming experiment with doubling thaw depth and variable biomass, and a vegetation removal manipulation to eliminate plant contributions. We sampled in August and September to capture transitions from high to low plant productivity, decreased surface soil temperature, and relatively small seasonal thaw extensions. We found that surface processes dominate spatial variation in old soil C loss and a process-based partitioning approach was crucial for constraining old soil C loss. Resampling the same plots in different times of the year revealed that old soil C losses tripled with cooling surface temperature, and the largest old soil C losses were detected when the organic-to-mineral soil horizons thawed (~50–60 cm). We suggest that the measured increase in old soil respiration over the season and when the organic-to-mineral horizon thawed, may be explained by mobilization of nitrogen that stimulates microbial decomposition at depth. Our results suggest that soil C in the organic to mineral horizon may be an important source of soil C loss as the entire Arctic region warms and could lead to nonlinearities in projected permafrost climate feedbacks.

54 ENVIRONMENTAL SCIENCES↗

Global ecotypes in the ubiquitous marine clade SAR86

SAR86 is an abundant and ubiquitous heterotroph in the surface ocean that plays a central role in the function of marine ecosystems. We hypothesized that despite its ubiquity, different SAR86 subgroups may be endemic to specific ocean regions and functionally specialized for unique marine environments. However, the global biogeographical distributions of SAR86 genes, and the manner in which these distributions correlate with marine environments, have not been investigated. We quantified SAR86 gene content across globally distributed metagenomic samples and modeled these gene distributions as a function of 51 environmental variables. We identified five distinct clusters of genes within the SAR86 pangenome, each with a unique geographic distribution associated with specific environmental characteristics. Gene clusters are characterized by the strong taxonomic enrichment of distinct SAR86 genomes and partial assemblies, as well as differential enrichment of certain functional groups, suggesting differing functional and ecological roles of SAR86 ecotypes. We then leveraged our models and high-resolution, remote sensing-derived environmental data to predict the distributions of SAR86 gene clusters across the world's oceans, creating global maps of SAR86 ecotype distributions. Finally, our results reveal that SAR86 exhibits previously unknown, complex biogeography, and provide a framework for exploring geographic distributions of genetic diversity from other microbial clades.

59 BASIC BIOLOGICAL SCIENCES↗

ORBITaL-Net: A labeled training library for large-scale building feature extraction

Over the course of several years, nearly 1.5 million building outlines have been created from approximately 128,000 training tiles covering roughly 7,000 km 2 of very high-resolution multispectral overhead imagery, primarily dated between 2010 and 2020. This dataset, dubbed the Oak Ridge Building Image and TrAining Label Net (ORBITaL-Net), is designed for machine learning applications and is global in scope, with samples drawn from 72 countries across North America, South America, Africa, Europe, and Asia. ORBITaL-Net captures a great diversity in geographic setting, structural characteristics, land use (urban and rural), terrain, and imagery conditions. While the labeled building outlines are themselves valuable, the dataset’s true strength lies in the pairing of these labels with corresponding reference imagery, which is being released for open source use. Similar to SpaceNet and Replicable AI For Microplanning (ramp), this building outline dataset will allow the larger computer vision community from academia, government, and industry the opportunity to develop robust, scalable, and generalizable geospatial machine learning techniques. Unlike SpaceNet and ramp, which offer high resolution labels and imagery primarily for large urban cities, ORBITaL-Net is not focused on training samples from heavily populated areas but instead aims to capture the innate variability of conditions present in both the physical environment and imagery collections.

Geography↗

Bayesian Static Parameter Estimation for Partially Observed Diffusions via Multilevel Monte Carlo

In this article we consider static Bayesian parameter estimation for partially observed diffusions that are discretely observed. We work under the assumption that one must resort to discretizing the underlying diffusion process, for instance, using the Euler--Maruyama method. Given this assumption, we show how one can use Markov chain Monte Carlo (MCMC) and particularly particle MCMC [C. Andrieu, A. Doucet, and R. Holenstein, J. R. Stat. Soc. Ser. B Stat. Methodol., 72 (2010), 269--342] to implement a new approximation of the multilevel (ML) Monte Carlo (MC) collapsing sum identity. Our approach comprises constructing an approximate coupling of the posterior density of the joint distribution over parameter and hidden variables at two different discretization levels and then correcting by an importance sampling method. The variance of the weights are independent of the length of the observed data set. The utility of such a method is that, for a prescribed level of mean square error, the cost of this MLMC method is provably less than i.i.d. sampling from the posterior associated to the most precise discretization. However the method here comprises using only known and efficient simulation methodologies. Finally, the theoretical results are illustrated by inference of the parameters of two prototypical processes given noisy partial observations of the process: the first is an Ornstein--Uhlenbeck process and the second is a more general Langevin equation.

97 MATHEMATICS AND COMPUTING↗

Quality-Controlled Meteorological Data from the Flood Control District of Maricopa County (FCDMC) Network, Phoenix, Arizona (1987-2024)

This dataset contains 15- or 30-minute interval meteorological data from the Flood Control District of Maricopa County (FCDMC), Arizona, USA, covering eight key variables across multiple sensor stations between 1987 and 2024. Each variable is stored as a separate CSV file, containing time-series data that have undergone rigorous quality control (QC) procedures and, where appropriate, short-gap interpolation for consistency. The quality control (QC) pipeline consisted of four sequential tests: (1) a range test to ensure all values fall within physically realistic limits, (2) a step test to identify abrupt and implausible changes between consecutive records, (3) a proximity test that validates flagged values from step test using data from nearby stations and exceedance probability thresholds, and (4) a persistence test to detect and remove periods of unrealistically constant readings. These thresholds were calibrated to Arizona’s environmental conditions and sensor specifications. After QC, short gaps (≤2 hours) were linearly interpolated to ensure consistent temporal resolution, except for wind variables. Due to a major upgrade in FCDMC’s data transmission system, only ALERT-2 protocol data (2016–2024) for wind variables are included; earlier ALERT-1 data were excluded because of irregular sampling and high missing rates. This dataset supports regional climate and infrastructure resilience studies by providing standardized, high-resolution meteorological data for the greater Phoenix metropolitan area.

54 ENVIRONMENTAL SCIENCES↗

MACCS Theory Manual

This report describes the models of the MACCS computer code as presented in MACCS Version 3.10.0. The purpose of MACCS is to simulate the impact of severe accidents at nuclear power plants on the surrounding environment. MACCS has been developed by Sandia National Laboratories for the U.S. Nuclear Regulatory Commission. From a given release of radioactive material into the atmosphere, MACCS estimates the extent and magnitude of radiological contamination, offsite doses, protective actions, socioeconomic impacts and costs, and health effects. Since the weather at the time of an accident is not predictable, MACCS supports various sampling options to run a representative set of simulations to evaluate weather variability. MACCS simulates atmospheric transport with a straight-line Gaussian plume segment model. From the estimated air and ground concentrations, MACCS models dose projections through several dose exposure pathways. These exposures can be offset by protective actions during the emergency response and long-term recovery of the accident. MACCS users directly specify the evacuation and sheltering area, while other protective actions (e.g., relocation, farmland restrictions, decontamination) are based on user-specified dose or concentration limits. While protective actions help reduce dose accumulation, they also cause social and economic impacts. MACCS models the extent of displaced individuals and land contamination, and the cost of offsite property damage, economic disruptions, and various accident expenditures caused by protective actions. Finally, from the dose accumulation, MACCS estimates early and stochastic health effects according to dose-response models. The purpose of consequence analyses is to be able to understand and estimate the impact of nuclear accidents. Consequence analysis is an essential tool to inform determinations of adequate protection of the public, to understand nuclear power hazards, to measure the value of regulations, and to help us appreciate the importance of nuclear safety. As such, MACCS has a variety of regulatory uses including environmental analyses (10 CFR 51.53, 52.47), regulatory cost-benefit analyses, backfit analyses (10 CFR 50.109), consequence analysis studies such as SOARCA (NUREG-1935), Level 3 PRA studies, and risk-informing of emergency planning (10 CFR 50 App. E and 50.47). This report updates the previous MACCS theory manual (NUREG/CR-4691 Vol. 2; Chanin, Sprung, Ritchie, & Jow, 1990) and accompanies the MACCS User's Guide (SAND-2021-1588) that describes the use and input requirements of the graphical user interface of MACCS known as WinMACCS. The MACCS User's Guide is also a reference guide that describes data input file formats, describes various software components in the MACCS code suite, and provides a set of example tutorials for running WinMACCS. Also, soon to be published is a MACCS input parameter guidance report (NUREG/CR-7270) that provides technical bases for commonly used MACCS input values. This page left blank

97 MATHEMATICS AND COMPUTING↗

Overview: Precipitation characteristics and sensitivities to environmental conditions during GoAmazon2014/5 and ACRIDICON-CHUVA

This study provides an overview of precipitation processes and their sensitivities to environmental conditions in the Central Amazon Basin near Manaus during the GoAmazon2014/5 and ACRIDICON-CHUVA experiments. Here, this study takes advantage of the numerous measurement platforms and instrument systems operating during both campaigns to sample cloud structure and environmental conditions during 2014 and 2015; the rainfall variability among seasons, aerosol loading, land surface type, and topography has been carefully characterized using these data. Differences between the wet and dry seasons were examined from a variety of perspectives. The rainfall rates distribution, total amount of rainfall, and raindrop size distribution (the mass-weighted mean diameter) were quantified over both seasons. The dry season generally exhibited higher rainfall rates than the wet season and included more intense rainfall periods. However, the cumulative rainfall during the wet season was 4 times greater than that during the total dry season rainfall, as shown in the total rainfall accumulation data. The typical size and life cycle of Amazon cloud clusters (observed by satellite) and rain cells (observed by radar) were examined, as were differences in these systems between the seasons. Moreover, monthly mean thermodynamic and dynamic variables were analysed using radiosondes to elucidate the differences in rainfall characteristics during the wet and dry seasons. The sensitivity of rainfall to atmospheric aerosol loading was discussed with regard to mass-weighted mean diameter and rain rate. This topic was evaluated only during the wet season due to the insignificant statistics of rainfall events for different aerosol loading ranges and the low frequency of precipitation events during the dry season. The impacts of aerosols on cloud droplet diameter varied based on droplet size. For the wet season, we observed no dependence between land surface type and rain rate. However, during the dry season, urban areas exhibited the largest rainfall rate tail distribution, and deforested regions exhibited the lowest mean rainfall rate. Airplane measurements were taken to characterize and contrast cloud microphysical properties and processes over forested and deforested regions. Vertical motion was not correlated with cloud droplet sizes, but cloud droplet concentration correlated linearly with vertical motion. Clouds over forested areas contained larger droplets than clouds over pastures at all altitudes. Finally, the connections between topography and rain rate were evaluated, with higher rainfall rates identified at higher elevations during the dry season.

54 ENVIRONMENTAL SCIENCES↗