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At least 613 records · Page 34

High Efficiency Light Harvesting by Carotenoids in the LH2 Complex from Photosynthetic Bacteria: Unique Adaptation to Growth under Low-Light Conditions

Rhodopin, rhodopinal, and their glucoside derivatives are carotenoids that accumulate in different amounts in the photosynthetic bacterium, Rhodoblastus (Rbl.) acidophilus strain 7050, depending on the intensity of the light under which the organism is grown. The different growth conditions also have a profound effect on the spectra of the bacteriochlorophyll (BChl) pigments that assemble in the major LH2 light-harvesting pigment–protein complex. Under high-light conditions the well-characterized B800-850 LH2 complex is formed and accumulates rhodopin and rhodopin glucoside as the primary carotenoids. Under low-light conditions, a variant LH2, denoted B800-820, is formed, and rhodopinal and rhodopinal glucoside are the most abundant carotenoids. The present investigation compares and contrasts the spectral properties and dynamics of the excited states of rhodopin and rhodopinal in solution. In addition, the systematic differences in pigment composition and structure of the chromophores in the LH2 complexes provide an opportunity to explore the effect of these factors on the rate and efficiency of carotenoid-to-BChl energy transfer. It is found that the enzymatic conversion of rhodopin to rhodopinal by Rbl. acidophilus 7050 grown under low-light conditions results in nearly 100% carotenoid-to-BChl energy transfer efficiency in the LH2 complex. This comparative analysis provides insight into how photosynthetic systems are able to adapt and survive under challenging environmental conditions.

14 SOLAR ENERGY↗

Geochemical Exports to River From the Intrameander Hyporheic Zone Under Transient Hydrologic Conditions: East River Mountainous Watershed, Colorado

To understand how redox processes influence carbon, nitrogen, and iron cycling within the intrameander hyporheic zone, we developed a biotic and abiotic reaction network and incorporated it into the reactive transport simulator PFLOTRAN. Additionally, two-dimensional reactive flow and transport simulations were performed (1) to evaluate how transient hydrological conditions control the lateral redox zonation within an intrameander region of the East River in Colorado and (2) to quantify the impact of a single meander on subsurface exports of carbon and other geochemical species to the river. The meander's overall contribution to the river was quantified by integrating geochemical outfluxes along the outside of the meander bend. The model was able to capture the field-observed trends of dissolved oxygen, nitrate, iron, pH, and total inorganic carbon along a 2-D transect. Consistent with field observations, simulated dissolved oxygen and nitrate decreased along the intrameander flow paths while iron (Fe 2+ ) concentration increased. The simulation results further demonstrated that the reductive potential of the lateral redox zonation was controlled by groundwater velocities resulting from river stage fluctuations, with low-water conditions promoting reducing conditions. The sensitivity analysis results showed that permeability had a more significant impact on biogeochemical zonation compared to the reaction pathways under transient hydrologic conditions. Lastly, the simulation results further indicated that the meander acted as a sink for organic and inorganic carbon as well as iron during the extended baseflow and high-water conditions; however, these geochemical species were released into the river during the falling limb of the hydrograph.

58 GEOSCIENCES↗

Assessing Shifts in Regional Hydroclimatic Conditions of U.S. River Basins in Response to Climate Change over the 21st Century

Characterization of shifts in regional hydroclimatic conditions helps reduce negative consequences on agriculture, environment, economy, society, and ecosystem. This study assesses shifts in regional hydroclimatic conditions across the conterminous United States in response to climate change over the 21 st Century. The hydrological responses of five downscaled climate models from the Multivariate Adaptive Constructed Analogs (MACA) dataset ranging from the driest to wettest and least warm to hottest were simulated using the Variable Infiltration Capacity (VIC) model. Shifts in regional hydroclimatic conditions at 8-digit hydrologic unit scale (HUC8) were evaluated by the magnitude and direction of movements in the Budyko space. HUC8 river basins were then clustered into seven unique hydroclimatic behavior groups using the K-means method. A tree classification method was proposed to illustrate the relationships between hydroclimatic behavior groups and regional characteristics. The results indicate that hydroclimatic responses may vary from a river basin to another, but basins in the same neighborhood follow a similar movement in the Budyko space. The systematic hydroclimatic behavior of river basins is highly associated with their regional landform, climate, and ecosystem characteristics. Most HUC8s with Mountain, Plateau and Basin landform types will likely experience less arid conditions. However, most HUC8s with Plain landform type behave differently according to the regional ecosystem and climate. This study provides a potential roadmap of shifts in regional hydroclimatic conditions of U.S. river basins, which can be used to improve regional preparedness and ability of various sectors to mitigate or adapt to the impacts of future hydroclimate change.

54 ENVIRONMENTAL SCIENCES↗

The Influence of Land‐Surface Conditions on the 2020–2021 Western US Drought

Abstract In summer 2021, 90% of the western United States (WUS) experienced drought, with over half of the region facing extreme or exceptional conditions, leading to water scarcity, crop loss, ecological degradation, and significant socio‐economic consequences. Beyond the established influence of oceanic forcing and internal atmospheric variability, this study highlights the importance of land‐surface conditions in the development of the 2020–2021 WUS drought, using observational data analysis and novel numerical simulations. Our results demonstrate that the soil moisture state preceding a meteorological drought, due to its intrinsic memory, is a critical factor in the development of soil droughts. Specifically, wet soil conditions can delay the transition from meteorological to soil droughts by several months or even nullify the effects of La Niña‐driven meteorological droughts, while drier conditions can exacerbate these impacts, leading to more severe soil droughts. For the same reason, soil droughts can persist well beyond the end of meteorological droughts. Our numerical experiments suggest a relatively weak soil moisture‐precipitation coupling during this drought period, corroborating the primary contributions of the ocean and atmosphere to this meteorological drought. Additionally, drought‐induced vegetation losses can mitigate soil droughts by reducing evapotranspiration and slowing the depletion of soil moisture. This study highlights the importance of soil moisture and vegetation conditions in seasonal‐to‐interannual drought predictions. Findings from this study have implications for regions like the WUS, which are experiencing anthropogenically‐driven soil aridification and vegetation greening, suggesting that future soil droughts in these areas may develop more rapidly, become more severe, and persist longer.

Jiang, Yelin [Lamont‐Doherty Earth Observatory Col↗

Dynamic strength of iron under pressure-temperature conditions of Earth’s inner core

Iron (Fe) is a primary constituent of terrestrial planetary cores, yet its rheological properties under extreme conditions remain uncertain. Here we present direct measurements of Fe strength at 310-430 GPa pressures and 3700-5800 K temperatures, obtained using Rayleigh-Taylor (RT) instability experiments at the National Ignition Facility. Single-crystal α-Fe samples with [001] and [111] orientations are shock-ramp compressed past the α-ε transition along paths approaching Earth’s inner core conditions. We find that ε-Fe derived from [001] α-Fe is consistently stronger (11-20 GPa) than that from [111] α-Fe (8-18 GPa), contrary to the trend at ambient conditions. Large-scale molecular dynamics simulations reproduce this atypical strength anisotropy and attribute it to microstructural evolution during the phase transition and subsequent ε-phase plasticity. Ripple growth analysis further constrains viscosities of 100-170 Pa·s under the driven conditions. Our results provide experimental benchmarks for Fe rheology at inner-core conditions, with implications for seismic anisotropy and the geodynamo.

Condensed-matter physics↗

New insights on the complex dynamics of two-phase flow in porous media under intermediate-wet conditions

Multiphase flow in porous media is important in a number of environmental and industrial applications such as soil remediation, CO 2 sequestration, and enhanced oil recovery. Wetting properties control flow of immiscible fluids in porous media and fluids distribution in the pore space. In contrast to the strong and weak wet conditions, pore-scale physics of immiscible displacement under intermediatewet conditions is less understood. This study reports the results of a series of two-dimensional highresolution direct numerical simulations with the aim of understanding the pore-scale dynamics of twophase immiscible fluid flow under intermediate-wet conditions. Our results show that for intermediatewet porous media, pore geometry has a strong influence on interface dynamics, leading to co-existence of concave and convex interfaces. Intermediate wettability leads to various interfacial movements which are not identified under imbibition or drainage conditions. These pore-scale events significantly influence macro-scale flow behaviour causing the counter-intuitive decline in recovery of the defending fluid from weak imbibition to intermediate-wet conditions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Photosynthetic modulation during the diurnal cycle in a unicellular diazotrophic cyanobacterium grown under nitrogen-replete and nitrogen-fixing conditions

Abstract Cyanobacteria are the only oxygenic photosynthetic organisms that can fix nitrogen. In diazotrophic cyanobacteria, the regulation of photosynthesis during the diurnal cycle is hypothesized to be linked with nitrogen fixation and involve the D1 protein isoform PsbA4. The amount of bioavailable nitrogen has a major impact on productivity in aqueous environments. In contrast to low- or nitrogen-fixing (−N) conditions, little data on photosynthetic regulation under nitrogen-replete (+ N) conditions are available. We compared the regulation of photosynthesis under −N and + N conditions during the diurnal cycle in wild type and a psbA4 deletion strain of the unicellular diazotrophic cyanobacterium Cyanothece sp. ATCC 51142. We observed common changes to light harvesting and photosynthetic electron transport during the dark in + N and −N conditions and found that these modifications occur in both diazotrophic and non-diazotrophic cyanobacteria. Nitrogen availability increased PSII titer when cells transitioned from dark to light and promoted growth. Under −N conditions, deletion of PsbA4 modified charge recombination in dark and regulation of PSII titer during dark to light transition. We conclude that darkness impacts the acceptor-side modifications to PSII and photosynthetic electron transport in cyanobacteria independently of the nitrogen-fixing status and the presence of PsbA4.

59 BASIC BIOLOGICAL SCIENCES↗

Generalized shock conditions and the contact discontinuity in the Hall-magnetohydrodynamics model

It is shown that shocks and contact discontinuities in the Hall-magnetohydrodynamics (HMHD) model must satisfy solvability conditions that replace some of the familiar Rankine-Hugoniot jump conditions when the latter do not apply due to singular behavior of fluxes of conserved quantities. Some of these conditions depend on the larger topology of the plasma and magnetic field and are not merely 'local.' The contact discontinuity which separates two adjoining plasma regions or plasma and vacuum regions is the simplest case where the new jump conditions are applicable and is discussed for a toroidal plasma with sheared magnetic field such as the tokamak, but with no initial mass flow. It is proven that a static discontinuous tokamak-like equilibrium is linearly stable in the HMHD model if it is linearly stable within the ideal magnetohydrodynamics model, provided that the electron pressure depends only on the density, and some other restrictions on the ratio of pressure to density gradients also apply. When the electron pressure does depend on two thermodynamic variables, a sufficient condition for Hall-MHD plasma stability is derived as well.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Jump conditions in transonic equilibria

In the present paper, the numerical calculation of transonic equilibria, first introduced with the FLOW code in Guazzotto et al.[Phys. Plasmas 11, 604 (2004)], is critically reviewed. In particular, the necessity and effect of imposing explicit jump conditions at the transonic discontinuity are investigated. It is found that 'standard' (low-{beta}, large aspect ratio) transonic equilibria satisfy the correct jump condition with very good approximation even if the jump condition is not explicitly imposed. On the other hand, it is also found that high-{beta}, low aspect ratio equilibria require the correct jump condition to be explicitly imposed. Various numerical approaches are described to modify FLOW to include the jump condition. It is proved that the new methods converge to the correct solution even in extreme cases of very large {beta}, while they agree with the results obtained with the old implementation of FLOW in lower-{beta} equilibria.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

General coalescence conditions for the exact wave functions: Higher-order relations for two-particle systems

We derived the necessary conditions that the non-relativistic time-independent exact wave functions for two-particle systems must satisfy at a coalescence (or cusp) point. Some of such necessary conditions are already known to be Kato's cusp condition (CC) and Rassolov and Chipman's CC. In the present study, we extended and generalized those conditions, calling them generalized coalescence conditions (GCCs). Kato's CC and Rassolov and Chipman's CC were shown to be specific cases included in the GCCs. The GCCs can be applied not only to Coulombic systems but also to any systems where the interaction between two particles is represented in a power series of the inter-particle distance. We confirmed the correctness of our derivation of these GCCs by applying the free complement wave functions of a hydrogen atom in ground and excited states, a harmonic oscillator, and a system with an interacting potential of V=r.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Experimental study of elliptical jet from sub to supercritical conditions

The jet mixing at supercritical conditions involves fluid dynamics as well as thermodynamic phenomena. All the jet mixing studies at critical conditions to the present date have focused only on axisymmetric jets. When the liquid jet is injected into supercritical environment, the thermodynamic transition could be well understood by considering one of the important fluid properties such as surface tension since it decides the existence of distinct boundary between the liquid and gaseous phase. It is well known that an elliptical liquid jet undergoes axis-switching phenomena under atmospheric conditions due to the presence of surface tension. The experimental investigations were carried out with low speed elliptical jet under supercritical condition. Investigation of the binary component system with fluoroketone jet and N{sub 2} gas as environment shows that the surface tension force dominates for a large downstream distance, indicating delayed thermodynamic transition. The increase in pressure to critical state at supercritical temperature is found to expedite the thermodynamic transition. The ligament like structures has been observed rather than droplets for supercritical pressures. However, for the single component system with fluoroketone jet and fluoroketone environment shows that the jet disintegrates into droplets as it is subjected to the chamber conditions even for the subcritical pressures and no axis switching phenomenon is observed. For a single component system, as the pressure is increased to critical state, the liquid jet exhibits gas-gas like mixing behavior and that too without exhibiting axis-switching behavior.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Relating different quantum generalizations of the conditional Rényi entropy

Recently a new quantum generalization of the Rényi divergence and the corresponding conditional Rényi entropies was proposed. Here, we report on a surprising relation between conditional Rényi entropies based on this new generalization and conditional Rényi entropies based on the quantum relative Rényi entropy that was used in previous literature. Our result generalizes the well-known duality relation H(A|B) + H(A|C) = 0 of the conditional von Neumann entropy for tripartite pure states to Rényi entropies of two different kinds. As a direct application, we prove a collection of inequalities that relate different conditional Rényi entropies and derive a new entropic uncertainty relation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Characterization of detonation soot produced during steady and overdriven conditions for three high explosive formulations

The detonation of high explosives (HE) produces a dense fluid of molecular gases and solid carbon. The solid detonation carbon contains various carbon allotropes such as detonation nanodiamonds, onion-like carbon, graphite and amorphous carbon, with the formation of the different forms dependent upon pressure, temperature and the environmental conditions of the detonation. We have collected solid carbon residues from controlled detonations of three HE formulations (Composition B-3, PBX 9501, and PBX 9502). Soot was collected from experiments designed to produce both steady and overdriven conditions, and from detonations in both an ambient (air) atmosphere and in an inert Ar atmosphere. Differences in solid carbon residues were quantified using X-ray photoelectron spectroscopy and carbon isotope measurements. Environmental conditions, HE formulation, and peak pressures influenced the amount of and isotopic composition of the carbon in the soot. Detonations in an Ar atmosphere produced greater amounts of carbon soot with lower δ 13 C values than those in ambient air. Therefore, solid carbon residues continued to evolve after detonation due to excess oxygen in the ambient air detonations. As well, higher peak pressures in overdriven conditions produced less carbon soot with, in general, higher δ 13 C values. Consequently, while overdriven conditions only produced peak pressures for a limited duration, it was enough to influence the composition of the solid carbon residues.

36 MATERIALS SCIENCE↗

Physical discovery in representation learning via conditioning on prior knowledge

Recent advances in electron, scanning probe, optical, and chemical imaging and spectroscopy yield bespoke data sets containing the information of structure and functionality of complex systems. In many cases, the resulting data sets are underpinned by low-dimensional simple representations encoding the factors of variability within the data. The representation learning methods seek to discover these factors of variability, ideally further connecting them with relevant physical mechanisms. However, generally, the task of identifying the latent variables corresponding to actual physical mechanisms is extremely complex. Here, we present an empirical study of an approach based on conditioning the data on the known (continuous) physical parameters and systematically compare it with the previously introduced approach based on the invariant variational autoencoders. The conditional variational autoencoder (cVAE) approach does not rely on the existence of the invariant transforms and hence allows for much greater flexibility and applicability. Interestingly, cVAE allows for limited extrapolation outside of the original domain of the conditional variable. However, this extrapolation is limited compared to the cases when true physical mechanisms are known, and the physical factor of variability can be disentangled in full. We further show that introducing the known conditioning results in the simplification of the latent distribution if the conditioning vector is correlated with the factor of variability in the data, thus allowing us to separate relevant physical factors. We initially demonstrate this approach using 1D and 2D examples on a synthetic data set and then extend it to the analysis of experimental data on ferroelectric domain dynamics visualized via piezoresponse force microscopy.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

CFD Simulations of Molten Salts Within Plasma-Facing Components with Twisted Tape Inserts Under One-Sided–Heated Conditions

For liquid immersion blankets (LIBs), the heat removal within different plasma-facing components (PFCs) requires substantial heat removal capabilities that could benefit from the usage of heat transfer enhancements. Of consideration are twisted tape insert heat transfer enhancements that are ribbon-like metal pieces inserted within cooling channels that increase fluid mixing, resulting in higher heat transfer and pressure drop. Unlike traditional applications, PFCs such as divertor coolant tubes experience a significantly higher heat flux on one side versus the other or entirely one-sided heating. These conditions are not well studied for molten salts where the higher Prandtl numbers characteristic of the fluids are significantly higher than water, gases, and liquid metals. As an effort to study this knowledge gap, large eddy simulations were done with Prandtl numbers representative of FLiBe at proposed operating conditions. In this study, the effects of applying a surface heat flux to one side of a tube versus the entire tube with a twisted tape insert were investigated for the heat transfer coefficient and effects on the temperature profile. The findings of the study suggest that for Prandtl number fluids above unity, the Nusselt number was largely unaffected by the change in boundary condition. Both boundary conditions showed good agreement with the Manglik and Bergles Nusselt number correlation for tight-fitting twisted tapes. Finally, the outcomes of this study will be useful for future design studies of LIBs to provide fundamental guidance implementing twisted tape inserts and their performance in one-sided–heated conditions.

molten salts↗

RECONSTRUCTING THE HISTORY OF ENERGY CONDITION VIOLATION FROM OBSERVATIONAL DATA

We study the likelihood of energy condition violations in the history of the universe. Our method is based on a set of functions that characterize energy condition violation. Friedmann-Lemaitre-Robertson-Walker cosmological models are built around these 'indication functions'. By computing the Fisher matrix of model parameters using Type Ia supernova and Hubble parameter data, we extract the principal modes of these functions' redshift evolution. These modes allow us to obtain general reconstructions of energy condition violation history independent of the dark energy model. We find that the data suggest a history of strong energy condition violation, but the null and dominant energy conditions are likely to be fulfilled. Implications for dark energy models are discussed.

79 ASTRONOMY AND ASTROPHYSICS↗

Transients from initial conditions based on Lagrangian perturbation theory in N-body simulations II: the effect of the transverse mode

We study the initial conditions for cosmological N-body simulations for precision cosmology. In general, Zel'dovich approximation has been applied for the initial conditions of N-body simulations for a long time. These initial conditions provide incorrect higher-order growth. These error caused by setting up the initial conditions by perturbation theory is called transients. We investigated the impact of transient on non-Gaussianity of density field by performing cosmological N-body simulations with initial conditions based on first-, second-, and third-order Lagrangian perturbation theory in previous paper. In this paper, we evaluates the effect of the transverse mode in the third-order Lagrangian perturbation theory for several statistical quantities such as power spectrum and non-Gaussianty. Then we clarified that the effect of the transverse mode in the third-order Lagrangian perturbation theory is quite small.

79 ASTRONOMY AND ASTROPHYSICS↗

Tensor to scalar ratio and large scale power suppression from pre-slow roll initial conditions

We study the corrections to the power spectra of curvature and tensor perturbations and the tensor-to-scalar ratio r in single field slow roll inflation with standard kinetic term due to initial conditions imprinted by a ''fast-roll'' stage prior to slow roll. For a wide range of initial inflaton kinetic energy, this stage lasts only a few e-folds and merges smoothly with slow-roll thereby leading to non-Bunch-Davies initial conditions for modes that exit the Hubble radius during slow roll. We describe a program that yields the dynamics in the fast-roll stage while matching to the slow roll stage in a manner that is independent of the inflationary potentials. Corrections to the power spectra are encoded in a ''transfer function'' for initial conditions T{sub α}(k), P{sub α}(k) = P{sup BD}{sub α}(k)T{sub α}(k), implying a modification of the ''consistency condition'' for the tensor to scalar ratio at a pivot scale k{sub 0}: r(k{sub 0}) = −8n{sub T}(k{sub 0}) [T{sub T}(k{sub 0})/T{sub R}(k{sub 0})]. We obtain T{sub α}(k) to leading order in a Born approximation valid for modes of observational relevance today. A fit yields T{sub α}(k) = 1+A{sub α}k{sup −p}cos [2πωk/H{sub sr}+φ{sub α}], with 1.5∼<p∼<2, ω ≅ 1 and H{sub sr} the Hubble scale during slow roll inflation, where curvature and tensor perturbations feature the same p,ω for a wide range of initial conditions. These corrections lead to both a suppression of the quadrupole and oscillatory features in both P{sub R}(k) and r(k{sub 0}) with a period of the order of the Hubble scale during slow roll inflation. The results are quite general and independent of the specific inflationary potentials, depending solely on the ratio of kinetic to potential energy κ and the slow roll parameters ε{sub V}, η{sub V} to leading order in slow roll. For a wide range of κ and the values of ε{sub V}; η{sub V} corresponding to the upper bounds from Planck, we find that the low quadrupole is consistent with the results from Planck, and the oscillations in r(k{sub 0}) as a function of k{sub 0} could be observable if the modes corresponding to the quadrupole and the pivot scale crossed the Hubble radius very few (2–3) e-folds after the onset of slow roll. We comment on possible impact on the recent BICEP2 results.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗