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At least 631 records · Page 35

The use of Eupatorium Odoratum as bio-monitor for radionuclides determination in Manjung, Perak

The accumulation of radionuclides in plants can be used as bio-monitoring in the environment. This technique is a cost-effective as the plants used to uptake deposited radionuclides from soil, commonly as soil-to-plant transfer factor (TF), which is widely used for calculating radiological risk. Radionuclides deposited in the soil carry by the air as particles or gases lead to the accumulation in soil. Eupatorium odoratum, known as pokok kapal terbang in Malaysia was chosen as sample for their abundances and properties to measure surface soil contamination. The plants were collected in three different directions (North, North-East and South-East) from Manjung district. The plants were collected in same size and then separated in to three parts (roots, stems and leaves) to determine the transfer factor from soil to each part. The concentrations of thorium (Th) and uranium (U) were analyzed using Energy Disperse X-Ray Fluorescence (EDXRF) and found in the range of 1.20-3.50 mg/kg and 1.20-3.90 mg/kg in roots, 1.40-3.90 mg/kg and 1.50-5.90 mg/kg in stems and 1.50-2.50 mg/kg and 2.00-6.00 mg/kg in leaves, respectively. Transfer factor (TF) was calculated through concentrations as reported in this article and show that the plants have transferred and accumulated radionuclides in significant values. From radionuclides concentrations in topsoil, the radiological risk was calculated and the present result show that external hazard index (H{sub ex}) is below than unity indicate low radiological risk at that area.

54 ENVIRONMENTAL SCIENCES↗

Tuning Interfacial Thermal Conductance of Graphene Embedded in Soft Materials by Vacancy Defects

Nanocomposites based on graphene dispersed in matrices of soft materials are promising thermal management materials. Their effective thermal conductivity depends on both the thermal conductivity of graphene and the conductance of the thermal transport across graphene-matrix interfaces. Here we report on molecular dynamics simulations of the thermal transport across the interfaces between defected graphene and soft materials in two different modes: in the across mode, heat enters graphene from one side of its basal plane and leaves through the other side; in the non-across mode, heat enters or leaves a graphene simultaneously from both sides of its basal plane. We show that, as the density of vacancy defects in graphene increases from 0 to 8%, the conductance of the interfacial thermal transport in the across mode increases from 160.4 16 to 207.8 11 MW/m2K, while that in the non-across mode increases from 7.2 0.1 to 17.8 0.6 MW/m2K. The molecular mechanisms for these variations of thermal conductance are clarified by using the phonon density of states and structural characteristics of defected graphenes. On the basis of these results and effective medium theory, we show that it is possible to enhance the effective thermal conductivity of thermal nanocomposites by tuning the density of vacancy defects in graphene despite the fact that graphene s thermal conductivity always decreases as vacancy defects are introduced.

36 MATERIALS SCIENCE↗

The laser micro-machining system for diamond anvil cell experiments and general precision machining applications at the High Pressure Collaborative Access Team

We report we have designed and constructed a new system for micro-machining parts and sample assemblies used for diamond anvil cells and general user operations at the High Pressure Collaborative Access Team, sector 16 of the Advanced Photon Source. The new micro-machining system uses a pulsed laser of 400 ps pulse duration, ablating various materials without thermal melting, thus leaving a clean edge. With optics designed for a tight focus, the system can machine holes any size larger than 3 μm in diameter. Unlike a standard electrical discharge machining drill, the new laser system allows micro-machining of non-conductive materials such as: amorphous boron and silicon carbide gaskets, diamond, oxides, and other materials including organic materials such as polyimide films (i.e., Kapton). An important feature of the new system is the use of gas-tight or gas-flow environmental chambers which allow the laser micro-machining to be done in a controlled (e.g., inert gas) atmosphere to prevent oxidation and other chemical reactions in air sensitive materials. The gas-tight workpiece enclosure is also useful for machining materials with known health risks (e.g., beryllium). Specialized control software with a graphical interface enables micro-machining of custom 2D and 3D shapes. The laser-machining system was designed in a Class 1 laser enclosure, i.e., it includes laser safety interlocks and computer controls and allows for routine operation. Though initially designed mainly for machining of the diamond anvil cell gaskets, the laser-machining system has since found many other micro-machining applications, several of which are presented here.

47 OTHER INSTRUMENTATION↗

First results of radiation-driven, layered deuterium-tritium implosions with a 3-shock adiabat-shaped drive at the National Ignition Facility

Radiation-driven, layered deuterium-tritium plastic capsule implosions were carried out using a new, 3-shock “adiabat-shaped” drive on the National Ignition Facility. The purpose of adiabat shaping is to use a stronger first shock, reducing hydrodynamic instability growth in the ablator. The shock can decay before reaching the deuterium-tritium fuel leaving it on a low adiabat and allowing higher fuel compression. The fuel areal density was improved by ~25% with this new drive compared to similar “high-foot” implosions, while neutron yield was improved by more than 4 times, compared to “low-foot” implosions driven at the same compression and implosion velocity.

42 ENGINEERING↗

Regulation of ion homeostasis by aminolevulinic acid in salt-stressed wheat seedlings

Salinity is regarded as a worldwide agricultural threat, as it seriously limits plant development and productivity. Salt stress reduces water uptake in plants by disrupting the osmotic balance of soil solution. In addition, it creates a damaged metabolic process by causing ion imbalance in cells. In this study, we aim to examine the negative effects of 5-aminolevulinic acid (ALA) (20 mg/l) on the ion balance in wheat seedling leaves exposed to salt stress (150 mM). Sodium is known to be highly toxic for plant cells at high concentrations, and is significantly increased by salt stress. However, it can be reduced by combined application of ALA and salt, compared to salt application alone. On the other hand, while the K{sup +}/Na{sup +} ratio was reduced by salt stress, ALA application changed this ratio in favor of K{sup +}. Manganese, iron, and copper were also able to reduce stress. However, ALA pre-treatment resulted in mineral level increments. Conversely, the stress-induced rise in magnesium, potassium, calcium, phosphorus, zinc, and molybdenum were further improved by ALA application. These data clearly show that ALA has an important regulatory effect of ion balance in wheat leaves.

60 APPLIED LIFE SCIENCES↗

Kinetic interpretation of resonance phenomena in low pressure capacitively coupled radio frequency plasmas

Low pressure capacitive radio frequency (RF) plasmas are often described by equivalent circuit models based on fluid approaches that predict the self-excitation of resonances, e.g., high frequency oscillations of the total current in asymmetric discharges, but do not provide a kinetic interpretation of these effects. In fact, they leave important questions open: How is current continuity ensured in the presence of energetic electron beams generated by the expanding sheaths that lead to a local enhancement of the conduction current propagating through the bulk? How do the beam electrons interact with cold bulk electrons? What is the kinetic origin of resonance phenomena? Based on kinetic simulations, we find that the energetic beam electrons interact with cold bulk electrons (modulated on a timescale of the inverse local electron plasma frequency) via a time dependent electric field outside the sheaths. This electric field is caused by the electron beam itself, which leaves behind a positive space charge, that attracts cold bulk electrons towards the expanding sheath. The resulting displacement current ensures current continuity by locally compensating the enhancement of the conduction current. The backflow of cold electrons and their interaction with the nonlinear plasma sheath cause the generation of multiple electron beams during one phase of sheath expansion and contribute to a strongly non-sinusoidal RF current. These kinetic mechanisms are the basis for a fundamental understanding of the electron power absorption dynamics and resonance phenomena in such plasmas, which are found to occur in discharges of different symmetries including perfectly symmetric plasmas.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Comparative study of GeO{sub 2}/Ge and SiO{sub 2}/Si structures on anomalous charging of oxide films upon water adsorption revealed by ambient-pressure X-ray photoelectron spectroscopy

The energy difference between the oxide and bulk peaks in X-ray photoelectron spectroscopy (XPS) spectra was investigated for both GeO{sub 2}/Ge and SiO{sub 2}/Si structures with thickness-controlled water films. This was achieved by obtaining XPS spectra at various values of relative humidity (RH) of up to ∼15%. The increase in the energy shift is more significant for thermal GeO{sub 2} on Ge than for thermal SiO{sub 2} on Si above ∼10{sup −4}% RH, which is due to the larger amount of water molecules that infiltrate into the GeO{sub 2} film to form hydroxyls. Analyzing the origins of this energy shift, we propose that the positive charging of a partially hydroxylated GeO{sub 2} film, which is unrelated to X-ray irradiation, causes the larger energy shift for GeO{sub 2}/Ge than for SiO{sub 2}/Si. A possible microscopic mechanism of this intrinsic positive charging is the emission of electrons from adsorbed water species in the suboxide layer of the GeO{sub 2} film to the Ge bulk, leaving immobile cations or positively charged states in the oxide. This may be related to the reported negative shift of flat band voltages in metal-oxide-semiconductor diodes with an air-exposed GeO{sub 2} layer.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Confinement of electrons in the focus of the dipole wave

Based on the numerical modelling of the electron dynamics in the focal region of a dipole wave, we have found the confinement time of electrons in the region of the strongest electric field in a wide (up to 200 PW) power range. By comparing confinement times of particles and the spatial structures of their escape, we have determined the regimes of ponderomotive escape and radiation-dominated escape corresponding to normal and anomalous radiative trapping, as well as the threshold powers of these regimes. It is shown that in the regimes of ponderomotive escape, the confinement time decreases with increasing power and stabilises at the level of one third of the wave period with the particles leaving the focal region predominantly across the electric field. In the radiation-dominated regime, the confinement time, on the contrary, increases with increasing power, the rate of transverse particles’ escape decreases, and the particles leave the focal region in the form of compact beams. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Photoperiodic Regulation of the Seasonal Pattern of Photosynthetic Capacity and the Implications for Carbon Cycling

Although temperature is an important driver of seasonal changes in photosynthetic physiology, photoperiod also regulates leaf activity. Climate change will extend growing seasons if temperature cues predominate, but photoperiod-controlled species will show limited responsiveness to warming. We show that photoperiod explains more seasonal variation in photosynthetic activity across 23 tree species than temperature. Although leaves remain green, photosynthetic capacity peaks just after summer solstice and declines with decreasing photoperiod, before air temperatures peak. In support of these findings, saplings grown at constant temperature but exposed to an extended photoperiod maintained high photosynthetic capacity, but photosynthetic activity declined in saplings experiencing a naturally shortening photoperiod; leaves remained equally green in both treatments. Incorporating a photoperiodic correction of photosynthetic physiology into a global-scale terrestrial carbon-cycle model significantly improves predictions of seasonal atmospheric CO{sub 2} cycling, demonstrating the benefit of such a function in coupled climate system models. Accounting for photoperiod-induced seasonality in photosynthetic parameters reduces modeled global gross primary production 2.5% ({approx}4 PgC y{sup -1}), resulting in a >3% ({approx}2 PgC y{sup -1}) decrease of net primary production. Such a correction is also needed in models estimating current carbon uptake based on remotely sensed greenness. Photoperiod-associated declines in photosynthetic capacity could limit autumn carbon gain in forests, even if warming delays leaf senescence.

54 ENVIRONMENTAL SCIENCES↗

Plant salt stress status is transmitted systemically via propagating calcium waves

The existence and relevance of rapid long distance signaling in plants is evident to any observer of the nastic movements of the Venus flytrap (Dionaea muscipula) or the sensitive plant (Mimosa pudica). However, all plants require the transmission of sensory information from the site of perception to other tissues to adjust their physiological states according to their environment. It is becoming increasingly apparent that rapid long-distance signals exist throughout the plant kingdom and may be responsible for initiating a multitude of physiological responses: electrical “action potentials” have been shown to convey wounding and saltstress information from leaf-to-leaf (1, 2); a “hydraulic signal” transmitted by the direction of water movement within the xylem can mediate long-distance signaling of water stress experienced by the roots to the leaves in Arabidopsis (3); and reactive oxygen species (ROS) have been shown to propagate across a plant and carry stimulus-specific information to a variety of stresses (4). In PNAS, Choi et al. (5) use elegant approaches and present advances demonstrating that calcium can function as a long-distance signaling messenger, propagating in waves from roots and carrying salt-stress signals to induce expression of salt tolerance genes in leaves.

59 BASIC BIOLOGICAL SCIENCES↗

Two-metal versus one-metal mechanisms of lysine adenylylation by ATP-dependent and NAD + -dependent polynucleotide ligases

Polynucleotide ligases comprise a ubiquitous superfamily of nucleic acid repair enzymes that join 3'-OH and 5'-PO 4 DNA or RNA ends. Ligases react with ATP or NAD + and a divalent cation cofactor to form a covalent enzyme-(lysine-Nζ)–adenylate intermediate. Here, we report crystal structures of the founding members of the ATP-dependent RNA ligase family (T4 RNA ligase 1; Rnl1) and the NAD + -dependent DNA ligase family ( Escherichia coli LigA), captured as their respective Michaelis complexes, which illuminate distinctive catalytic mechanisms of the lysine adenylylation reaction. The 2.2-Å Rnl1•ATP•(Mg 2+ ) 2 structure highlights a two-metal mechanism, whereby: a ligase-bound “catalytic” Mg 2+ (H 2 O) 5 coordination complex lowers the p K a of the lysine nucleophile and stabilizes the transition state of the ATP α phosphate; a second octahedral Mg 2+ coordination complex bridges the β and γ phosphates; and protein elements unique to Rnl1 engage the γ phosphate and associated metal complex and orient the pyrophosphate leaving group for in-line catalysis. By contrast, the 1.55-Å LigA•NAD + •Mg 2+ structure reveals a one-metal mechanism in which a ligase-bound Mg 2+ (H 2 O) 5 complex lowers the lysine p K a and engages the NAD + α phosphate, but the β phosphate and the nicotinamide nucleoside of the nicotinamide mononucleotide (NMN) leaving group are oriented solely via atomic interactions with protein elements that are unique to the LigA clade. We conclude, the two-metal versus one-metal dichotomy demarcates a branchpoint in ligase evolution and favors LigA as an antibacterial drug target.

59 BASIC BIOLOGICAL SCIENCES↗

Nanoscale view of assisted ion transport across the liquid–liquid interface

During solvent extraction, amphiphilic extractants assist the transport of metal ions across the liquid–liquid interface between an aqueous ionic solution and an organic solvent. Investigations of the role of the interface in ion transport challenge our ability to probe fast molecular processes at liquid–liquid interfaces on nanometer-length scales. Recent development of a thermal switch for solvent extraction has addressed this challenge, which has led to the characterization by X-ray surface scattering of interfacial intermediate states in the extraction process. Here, we review and extend these earlier results. We find that trivalent rare earth ions, Y(III) and Er(III), combine with bis(hexadecyl) phosphoric acid (DHDP) extractants to form inverted bilayer structures at the interface; these appear to be condensed phases of small ion–extractant complexes. The stability of this unconventional interfacial structure is verified by molecular dynamics simulations. The ion–extractant complexes at the interface are an intermediate state in the extraction process, characterizing the moment at which ions have been transported across the aqueous–organic interface, but have not yet been dispersed in the organic phase. In contrast, divalent Sr(II) forms an ion–extractant complex with DHDP that leaves it exposed to the water phase; this result implies that a second process that transports Sr(II) across the interface has yet to be observed. Calculations demonstrate that the budding of reverse micelles formed from interfacial Sr(II) ion–extractant complexes could transport Sr(II) across the interface. Our results suggest a connection between the observed interfacial structures and the extraction mechanism, which ultimately affects the extraction selectivity and kinetics.

Liang, Zhu↗

Regulators of early maize leaf development inferred from transcriptomes of laser capture microdissection (LCM)-isolated embryonic leaf cells

The superior photosynthetic efficiency of C 4 leaves over C 3 leaves is owing to their unique Kranz anatomy, in which the vein is surrounded by one layer of bundle sheath (BS) cells and one layer of mesophyll (M) cells. Kranz anatomy development starts from three contiguous ground meristem (GM) cells, but its regulators and underlying molecular mechanism are largely unknown. To identify the regulators, we obtained the transcriptomes of 11 maize embryonic leaf cell types from five stages of pre-Kranz cells starting from median GM cells and six stages of pre-M cells starting from undifferentiated cells. Principal component and clustering analyses of transcriptomic data revealed rapid pre-Kranz cell differentiation in the first two stages but slow differentiation in the last three stages, suggesting early Kranz cell fate determination. In contrast, pre-M cells exhibit a more prolonged transcriptional differentiation process. Differential gene expression and coexpression analyses identified gene coexpression modules, one of which included 3 auxin transporter and 18 transcription factor (TF) genes, including known regulators of Kranz anatomy and/or vascular development. In situ hybridization of 11 TF genes validated their expression in early Kranz development. We determined the binding motifs of 15 TFs, predicted TF target gene relationships among the 18 TF and 3 auxin transporter genes, and validated 67 predictions by electrophoresis mobility shift assay. From these data, we constructed a gene regulatory network for Kranz development. Our study sheds light on the regulation of early maize leaf development and provides candidate leaf development regulators for future study.

59 BASIC BIOLOGICAL SCIENCES↗

Foliar elemental distribution in Blepharidium guatemalense assessed by synchrotron X-ray fluorescence spectroscopy and colorimetric optical microscopy

The hyperaccumulation phenomenon holds significant potential for Ni agromining in ultramafic areas; however, data on tropical hyperaccumulator species, particularly regarding metal distribution and tolerance mechanisms, remain scarce. Here, this study characterized the foliar elemental distribution of Blepharidium guatemalense, analyzed its metal localization at both tissue and cellular levels, and quantified its Ni accumulation when grown in Brazilian ultramafic soil. Plants were grown in pots for 90 days, and Ni concentrations in the aerial biomass and bio-ore were determined. Synchrotron-based micro-X-ray fluorescence (S-µXRF) was used to assess metal distribution in tissues, supplemented by microscopic examination with dimethylglyoxime (DMG) to visualize Ni accumulation in specific cell types. B. guatemalense reached 19,000 mg kg −1 Ni in leaves. Processing leaf biomass produced ash containing 24 wt% Ni, indicating promising metal-recovery potential for the species. S-µXRF revealed that Ni was predominantly localized in the central and secondary veins of the leaves, suggesting efficient vascular transport. Microscopic analysis using the colorimetric reagent DMG further showed that Ni accumulation occurs near the epidermis and phloem, suggesting that B. guatemalense employs specific physiological mechanisms for Ni translocation, potentially supporting both defense and growth functions. These results establish B. guatemalense as a promising candidate for large-scale Ni agromining in tropical regions.

36 MATERIALS SCIENCE↗

Excitation of the orbital inclination of Iapetus during planetary encounters

Saturn's moon, Iapetus, has an orbit in a transition region where the Laplace surface is bending from the equator to the orbital plane of Saturn. The orbital inclination of Iapetus to the local Laplace plane is ≅ 8°, which is unexpected because the inclination should be ≅ 0 if Iapetus formed from a circumplanetary disk on the Laplace surface. It thus appears that some process has pumped up Iapetus's inclination while leaving its eccentricity near zero (e ≅ 0.03 at present). Here, we examined the possibility that Iapetus's inclination was excited during the early solar system instability when encounters between Saturn and ice giants occurred. We found that the dynamical effects of planetary encounters on Iapetus's orbit sensitively depend on the distance of the few closest encounters. In 4 out of 10 instability cases studied here, the orbital perturbations were too large to be plausible. In one case, Iapetus's orbit was practically unaffected. In the remaining five cases, the perturbations of Iapetus's inclination were adequate to explain its present value. In three of these cases, however, Iapetus's eccentricity was excited to >0.1-0.25, and it is not clear whether it could have been damped to its present value (≅ 0.03) by a subsequent process (e.g., tides and dynamical friction from captured irregular satellites do not seem to be strong enough). Our results therefore imply that only 2 out of 10 instability cases (∼20%) can excite Iapetus's inclination to its current value (∼30% of trials lead to >5°) while leaving its orbital eccentricity low.

79 ASTRONOMY AND ASTROPHYSICS↗

ULTRA-FAINT DWARF GALAXIES AS A TEST OF EARLY ENRICHMENT AND METALLICITY-DEPENDENT STAR FORMATION

The close relation of star formation with molecular gas indicated by observations and assumed in recent models implies that the efficiency with which galaxies convert their gas into stars depends on gas metallicity. This is because abundance of molecular hydrogen is sensitive to abundance of dust, which catalyzes formation of H{sub 2} and helps to shield it from dissociating radiation. In this study, we point out that in the absence of significant pre-enrichment by Population III stars forming out of zero metallicity gas, such H{sub 2}-based star formation is expected to leave an imprint in the form of bi-modality in the metallicity distribution among dwarf galaxies and in the metallicity distribution of stars within individual galaxies. The bi-modality arises because when gas metallicity (and dust abundance) is low, formation of molecular gas is inefficient, the gas consumption timescale is long, and star formation and metal enrichment proceed slowly. When metallicity reaches a critical threshold value star formation and enrichment accelerate, which leads to rapid increase in both stellar mass and metallicity of galaxies. We demonstrate this process both using a simple analytical model and full cosmological simulations. In contrast, the observed metallicity distributions of dwarf galaxies or stars within them are not bi-modal. We argue that this discrepancy points to substantial early stochastic pre-enrichment by Population III stars to levels Z {approx} 10{sup -2} Z{sub Sun} in dense, star-forming regions of early galaxies.

79 ASTRONOMY AND ASTROPHYSICS↗

THEORY OF SOLAR MERIDIONAL CIRCULATION AT HIGH LATITUDES

We build a hydrodynamic model for computing and understanding the Sun's large-scale high-latitude flows, including Coriolis forces, turbulent diffusion of momentum, and gyroscopic pumping. Side boundaries of the spherical 'polar cap', our computational domain, are located at latitudes {>=} 60 Degree-Sign . Implementing observed low-latitude flows as side boundary conditions, we solve the flow equations for a Cartesian analog of the polar cap. The key parameter that determines whether there are nodes in the high-latitude meridional flow is {epsilon} = 2{Omega}n{pi}H{sup 2}/{nu}, where {Omega} is the interior rotation rate, n is the radial wavenumber of the meridional flow, H is the depth of the convection zone, and {nu} is the turbulent viscosity. The smaller the {epsilon} (larger turbulent viscosity), the fewer the number of nodes in high latitudes. For all latitudes within the polar cap, we find three nodes for {nu} = 10{sup 12} cm{sup 2} s{sup -1}, two for 10{sup 13}, and one or none for 10{sup 15} or higher. For {nu} near 10{sup 14} our model exhibits 'node merging': as the meridional flow speed is increased, two nodes cancel each other, leaving no nodes. On the other hand, for fixed flow speed at the boundary, as {nu} is increased the poleward-most node migrates to the pole and disappears, ultimately for high enough {nu} leaving no nodes. These results suggest that primary poleward surface meridional flow can extend from 60 Degree-Sign to the pole either by node merging or by node migration and disappearance.

79 ASTRONOMY AND ASTROPHYSICS↗

MODELING THE LINE-OF-SIGHT INTEGRATED EMISSION IN THE CORONA: IMPLICATIONS FOR CORONAL HEATING

One of the outstanding problems in all of space science is uncovering how the solar corona is heated to temperatures greater than 1 MK. Though studied for decades, one of the major difficulties in solving this problem has been unraveling the line-of-sight (LOS) effects in the observations. The corona is optically thin, so a single pixel measures counts from an indeterminate number (perhaps tens of thousands) of independently heated flux tubes, all along that pixel's LOS. In this paper we model the emission in individual pixels imaging the active region corona in the extreme ultraviolet. If LOS effects are not properly taken into account, erroneous conclusions regarding both coronal heating and coronal dynamics may be reached. We model the corona as an LOS integration of many thousands of completely independently heated flux tubes. We demonstrate that despite the superposition of randomly heated flux tubes, nanoflares leave distinct signatures in light curves observed with multi-wavelength and high time cadence data, such as those data taken with the Atmospheric Imaging Assembly on board the Solar Dynamics Observatory. These signatures are readily detected with the time-lag analysis technique of Viall and Klimchuk in 2012. Steady coronal heating leaves a different and equally distinct signature that is also revealed by the technique.

79 ASTRONOMY AND ASTROPHYSICS↗