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DOE OSTI2018

Wavelet methods for studying the onset of strong plasma turbulence

Recent simulations have demonstrated that coherent current sheets dominate the kinetic-scale energy dissipation in strong turbulence of magnetized plasma. Wavelet basis functions are a natural tool for analyzing turbulent flows containing localized coherent structures of different spatial scales. Here, wavelets are used to study the onset and subsequent transition to fully developed turbulence from a laminar state. Originally applied to neutral fluid turbulence, an iterative wavelet technique decomposes the field into coherent and incoherent contributions. In contrast to Fourier power spectra, finite time Lyapunov exponents, and simple measures of intermittency such as non-Gaussian statistics of field increments, the wavelet technique is found to provide a quantitative measure for the onset of turbulence and to track the transition to fully developed turbulence. The wavelet method makes no assumptions about the structure of the coherent current sheets or the underlying plasma model. Temporal evolution of the coherent and incoherent wavelet fluctuations is found to be highly correlated (a Pearson correlation coefficient of >0.9) with the magnetic field energy and plasma thermal energy, respectively. The onset of turbulence is identified with the rapid growth of a background of incoherent fluctuations spreading across a range of scales and a corresponding drop in the coherent components. This is suggestive of the interpretation of the coherent and incoherent wavelet fluctuations as measures of coherent structures (e.g., current sheets) and dissipation, respectively. The ratio of the incoherent to coherent fluctuations Ric is found to be fairly uniform in the turbulent state across different plasma models and provides an empirical threshold of ~0.1 for turbulence onset. The utility of this technique is illustrated through examples. First, it is applied to the Kelvin–Helmholtz instability from different simulation models including fully kinetic, hybrid (kinetic ion/fluid electron), and Hall MHD simulations. Second, the wavelet diagnostic is applied to the development of turbulence downstream of the bowshock in a global magnetosphere simulation. Finally, the wavelet technique is also shown to be useful as a de-noising method for particle simulations.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2025

Polarization-dependent resonant inelastic x-ray scattering of β-Ga2O3: An experimental and computational study

The bulk electronic structure of β-Ga2O3 single crystals was investigated using oxygen K-edge x-ray emission and absorption spectroscopy as well as resonant inelastic soft x-ray scattering. Spectra were obtained for different orientations of the crystal planes with respect to the polarization vector of the incident x-ray beam. The spectra are analyzed with calculations based on density functional theory and using the Bethe–Salpeter equation in the ocean code to take the core–hole interaction into account. These calculations correctly capture all the main features in the experimental spectra, demonstrating the potential of the approach to predict the electronic properties of similar compounds. We find a pronounced anisotropy as a function of the excitation polarization vector and significant differences in the spectral contributions from the inequivalent oxygen atoms of β-Ga2O3.

Pyatenko, Elizaveta↗

DOE OSTI2025

Action painting under spectroscopic light: Excited-state exchange interactions behind the vibrant blue in Jackson Pollock’s Number 1A, 1948

Number 1A, 1948 by Jackson Pollock is a quintessential example of his action painting technique where ropes of color, drips of black, and pools of white coalesce into the layered dynamism that defines his style. While past work has identified the red and yellow pigments that form part of his core palette, the vibrant blue in the painting has remained unassigned. In this study resonance Raman spectroscopy is used to assign the blue in the painting as manganese blue. This assignment offers critical context for the conservation of his works. Importantly, assignment of this pigment enables spectroscopic investigation of the electronic structure origin of the pure hue of manganese blue and the chemical phenomena that produce its color. To probe these phenomena, resonance Raman data are coupled to magnetic circular dichroism spectroscopy and density functional theory calculations to assign and analyze the two electronic transitions that create the blue color. This study reveals these bands are split by excited-state exchange interactions; the gap between them contains the reflected light that gives manganese blue its appearance. This sheds light on distinct advantages of molecular inorganic pigments: their ability to leverage ligand field effects in charge transfer states to create multiple intense visible absorption features and the ability to fine-tune pigment color through host lattice electrostatics.

DFT↗

DOE OSTI2023

Galaxy Interactions in Filaments and Sheets: Effects of the Large-scale Structures Versus the Local Density

Abstract Major interactions are known to trigger star formation in galaxies and alter their color. We study the major interactions in filaments and sheets using SDSS data to understand the influence of large-scale environments on galaxy interactions. We identify the galaxies in filaments and sheets using the local dimension and also find the major pairs residing in these environments. The star formation rate (SFR) and color of the interacting galaxies as a function of pair separation are separately analyzed in filaments and sheets. The analysis is repeated for three volume limited samples covering different magnitude ranges. The major pairs residing in the filaments show a significantly higher SFR and bluer color than those residing in the sheets up to the projected pair separation of ∼50 kpc. We observe a complete reversal of this behavior for both the SFR and color of the galaxy pairs having a projected separation larger than 50 kpc. Some earlier studies report that the galaxy pairs align with the filament axis. Such alignment inside filaments indicates anisotropic accretion that may cause these differences. We do not observe these trends in the brighter galaxy samples. The pairs in filaments and sheets from the brighter galaxy samples trace relatively denser regions in these environments. The absence of these trends in the brighter samples may be explained by the dominant effect of the local density over the effects of the large-scale environment.

Astronomy & Astrophysics↗

DOE OSTI2026

Improving ICARUS track reconstruction algorithms

The ICARUS experiment is part of the Short-Baseline Neutrino program at Fermilab. Its primary objective is to explore the possible existence of sterile neutrinos in the O(1 eV) mass range and to clarify the anomalies observed in the Liquid Scintillator Neutrino Detector and MiniBooNE experiments. The ICARUS-T600 detector is a Liquid Argon Time Projection Chamber, capable of producing high-resolution 3D images and precise calorimetric measurements of ionizing particles. This technology allows for a detailed study of neutrino interactions across a broad energy range, from a few keV to several hundred GeV. The track reconstruction is achieved through a software framework that applies a series of pattern recognition algorithms, transforming raw detector signals into fully reconstructed event topologies. This process involves identifying interaction vertices, particle tracks, and electromagnetic showers within the TPC. However, in certain cases, these algorithms may mistakenly break a single particle track into several shorter segments, interpreting each as a distinct particle. Since track length is used to estimate the particle's energy, such fragmentation can result in an energy underestimation of several hundred MeV. Furthermore, when a track is split into multiple segments, the particle identification (which relies on analyzing the energy loss as a function of the residual range) may fail, potentially leading to the loss of the entire event. To mitigate this problem, we have developed a dedicated algorithm designed to identify and reconnect (“stitch”) the tracks that were erroneously divided into multiple segments.

Ricci, Alessandro Maria [Pisa U.; INFN, Pisa] (ORC↗

DOE OSTI2022

Plasmon spectroscopy for the determination of Ti 3 C 2 T x MXene few layer stacks architecture

Like many 2D materials, numerous properties of MXene multilayers, and especially the most popular one Ti 3 C 2 T x , have been shown to significantly depend on their architecture, i.e. the number of layers and interlayer distance. These structural parameters are thus key elements to be characterized for the analysis of MXene properties. Focusing on valence electron energy-loss spectroscopy (VEELS) as performed in a transmission electron microscope (TEM), and using density functional theory (DFT) simulations, we here analyze the layer dependent large changes in the VEEL spectra of Ti 3 C 2 T x multilayers as a probe of their total thickness, and emphasize the bulk plasmon energy sensitivity to interlayer distance. Together these findings allow to directly quantify the absolute number of layers in a Ti 3 C 2 T x stack up to ~10 nm thickness and give access to interlayer distance modifications with sub-angström sensitivity, evidencing VEELS as a powerful method for the characterization of MXene multilayers on the nanometer scale. We expect these results to be relevant for the study of structure/properties correlations in this class of materials, especially with the development of in situ or environmental TEM experiments.

Materials Science↗

DOE OSTI2021

Broken Luttinger theorem in the two-dimensional Fermi-Hubbard model

One of the fundamental questions about high-temperature cuprate superconductors is the size of the Fermi surface underlying the superconducting state. By analyzing the single-particle spectral function for the Fermi-Hubbard model as a function of repulsion U and chemical potential μ, we find that the Fermi surface in the normal state undergoes a transition from a large Fermi surface matching the Luttinger volume as expected in a Fermi liquid, to a Fermi surface that encloses fewer electrons that we dub the “Luttinger breaking” phase, as the Mott insulator is approached. This transition into a non-Fermi-liquid phase that violates the Luttinger count occurs at a critical density in the absence of any other broken symmetry. We obtain the Fermi-surface contour from the spectral weight A k (ω = 0) and from an analysis of the singularities of the Green's function Re G k (E = 0), calculated using determinantal quantum Monte Carlo and analytic continuation methods. We discuss our numerical results in connection with experiments on Hall measurements, scanning tunneling spectroscopy, and angle-resolved photoemission spectroscopy.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Scanning ultrafast electron microscopy reveals photovoltage dynamics at a deeply buried $p^- \mathrm{Si/SiO_2}$ interface

The understanding and control of charge carrier interactions with defects at buried insulator/semiconductor interfaces is essential for achieving optimum performance in modern electronics. In this work, we report on the use of scanning ultrafast electron microscopy (SUEM) to remotely probe the dynamics of excited carriers at a Si surface buried below a thick thermal oxide. Our measurements illustrate a previously unidentified SUEM contrast mechanism, whereby optical modulation of the space-charge field in the semiconductor modulates the electric field in the thick oxide, thus affecting its secondary electron yield. By analyzing the SUEM contrast as a function of time and laser fluence we demonstrate the diffusion mediated capture of excited carriers by interfacial traps.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2019

Direct Detection of Dimer Orbitals in Ba 5 AlIr 2 O 11

The electronic states of many Mott insulators, including iridates, are often conceptualized in terms of localized atomic states such as the famous "${J}_{\mathrm{eff}}=1/2$ state." Although orbital hybridization can strongly modify such states and dramatically change the electronic properties of materials, probing this process is highly challenging. We directly detect and quantify the formation of dimer orbitals in an iridate material ${\mathrm{Ba}}_{5}{\mathrm{AlIr}}_{2}{\mathrm{O}}_{11}$ using resonant inelastic x-ray scattering. Sharp peaks corresponding to the excitations of dimer orbitals are observed and analyzed by a combination of density functional theory calculations and theoretical simulations based on an Ir-Ir cluster model. Such partially delocalized dimer states lead to a redefinition of the angular momentum of the electrons and changes in the magnetic and electronic behaviors of the material. We use this to explain the reduction of the observed magnetic moment with respect to predictions based on atomic states. This study opens new directions to study dimerization in a large family of materials, including solids, heterostructures, molecules, and transient states.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2020

Exciton-Phonon Interaction and Relaxation Times from First Principles

Electron-phonon interactions are key to understanding the dynamics of electrons in materials and can be modeled accurately from first principles. However, when electrons and holes form Coulomb-bound states (excitons), quantifying their interactions and scattering processes with phonons remains an open challenge. Here we show a rigorous approach for computing exciton-phonon (ex-ph) interactions and the associated exciton dynamical processes from first principles. Starting from the ab initio Bethe-Salpeter equation, we derive expressions for the ex-ph matrix elements and relaxation times. Finally, we apply our method to bulk hexagonal boron nitride, for which we map the ex-ph relaxation times as a function of exciton momentum and energy, analyze the temperature and phonon-mode dependence of the ex-ph scattering processes, and accurately predict the phonon-assisted photoluminescence. The approach introduced in this work is general and provides a framework for investigating exciton dynamics in a wide range of materials.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2018

Features of ZnO Nanocrystal Size Distribution in a Polymer Matrix

X-ray diffraction patterns of a photocurable epoxy acryl-based polymer composite with addition of ZnO nanocrystals are analyzed. We recover the size distribution function of the ZnO nanocrystals and estimate the median size of the nanocrystals (∼40–50 nm) from a detailed analysis of the most intensive peak in the X-ray diffraction pattern.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2018

Convergence of Probability Densities Using Approximate Models for Forward and Inverse Problems in Uncertainty Quantification

Here, we analyze the convergence of probability density functions utilizing approximate models for both forward and inverse problems. We consider the standard forward uncertainty quantification problem where an assumed probability density on parameters is propagated through the approximate model to produce a probability density, often called a push-forward probability density, on a set of quantities of interest (QoI). The inverse problem considered in this paper seeks to update an initial probability density assumed on model input parameters such that the subsequent push-forward of this updated density through the parameter-to-QoI map matches a given probability density on the QoI. We prove that the densities obtained from solving the forward and inverse problems, using approximate models, converge to the true densities as the approximate models converge to the true models. Numerical results are presented to demonstrate convergence rates of densities for sparse grid approximations of parameter-to-QoI maps and standard spatial and temporal discretizations of PDEs and ODEs.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2021

becquerel (bq) v0.4.0

Becquerel is a Python package for analyzing nuclear spectroscopic measurements. The core functionalities are reading and writing different spectrum file types, fitting spectral features, rebinning spectrum counts to different bin edges, performing detector calibrations and interpreting measurement results. It also includes tools for visualizing radiation spectra and fits of different spectral features, as well as convenient access to tabulated nuclear data both from remote servers and local caches. It relies heavily on the standard scientific Python stack of numpy, scipy, matplotlib, pandas, and numba. It is intended to be general-purpose enough that it can be useful to anyone from an undergraduate taking a laboratory course to the advanced

Bandstra, Mark↗

DOE OSTI2022

Surfactant

Surfactant is a tool to generate an SBOM for the files in a directory/system based on information contained in various file format, including but not limited to PE, ELF, Mach-O, Java classes, .NET assemblies, and various source code files/scripts. Gathered information can be output in a variety of different SBOM formats, and functionality is provided to manipulate and analyze SBOMs (merging, manual additions, querying info, etc). Users are able to add new features via a plugin system.

Lloyd, LeviJ↗

DOE OSTI2025

becquerel (bq) v0.7.0

Bandstra, Mark [Lawrence Berkeley National Laborat↗

DOE OSTI2024

Foldy: An open-source web application for interactive protein structure analysis

Foldy is a cloud-based application that allows non-computational biologists to easily utilize advanced AI-based structural biology tools, including AlphaFold and DiffDock. With many deployment options, it can be employed by individuals, labs, universities, and companies in the cloud without requiring hardware resources, but it can also be configured to utilize locally available computers. Foldy enables scientists to predict the structure of proteins and complexes up to 6000 amino acids with AlphaFold, visualize Pfam annotations, and dock ligands with AutoDock Vina and DiffDock. In our manuscript, we detail Foldy’s interface design, deployment strategies, and optimization for various user scenarios. We demonstrate its application through case studies including rational enzyme design and analyzing proteins with domains of unknown function. Furthermore, we compare Foldy’s interface and management capabilities with other open and closed source tools in the field, illustrating its practicality in managing complex data and computation tasks. Our manuscript underlines the benefits of Foldy as a day-to-day tool for life science researchers, and shows how Foldy can make modern tools more accessible and efficient.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

Measurement techniques using the electron beam profile scanner at the Fermilab Main Injector

This work presents techniques for non-invasive transverse profile measurements of high-intensity proton beams using an Electron Beam Profile Scanner (EBPS). The EBPS utilizes low-energy electrons as a probe to analyze the transverse size of proton beams, allowing for potential analysis on a single-bunch basis. Recent upgrades to the Fermilab Main Injector have enhanced beam power on target to 1 MW, with future developments targeting 2 MW. The higher beam power has increased the demand for non-invasive diagnostics, as invasive methods can disrupt operations.The techniques presented include 1) the slow scan technique, which serves as a proof of concept for the probe beam, 2) the one-shot scan technique for measuring horizontal beam profiles, and 3) the raster scan technique for analyzing horizontal beam profiles as a function of the longitudinal distribution of the beam. The profiles obtained will be crucial for studying and understanding instabilities in high-power, high-intensity proton beams. This will contribute to optimizing the operation of high-power proton accelerators by minimizing beam loss, activation, and damage to both the diagnostics and the accelerator components.

Mwaniki, Matilda [IIT, Chicago]↗

DOE OSTI2022

Nepheline Crystallization Studies and the Structural Integrity of the Residual (SIR) - FY 2022 Study Glasses

In FY22 a set of 367 HLW glasses with compositions representative of the Waste Treatment and Immobilization Plant (WTP) processing region were aggregated and analyzed with the Structural Integrity of the Residual (SIR) model developed by the Savannah River National Laboratory (SRNL). An additional 12 glasses targeting 27 – 37 wt % alumina (in glass) and at waste loadings up to ~70 wt % were fabricated and added to the database. Collectively, this data set was analyzed with regression statistics and partitioning functions to reveal correlations between boron release and the chemical composition. FY22 results indicate that the SIR theoretical alkali-silicate precipitation term, Al 2 O 3 and B 2 O 3 concentration, and SIR computed non-bridging oxygen are significant predictors of chemical durability. A statistical model using the SIR parameters was shown to have greater overall accuracy than the nepheline discriminator model while maintaining false predictions of pour durability below 1%. In FY23, we will continue this work to focus on refining the SIR with glass compositions that challenge the SIR correlation terms, namely the theoretical crystalline precipitation and non-bridging oxygen terms.

36 MATERIALS SCIENCE↗