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At least 631 records · Page 35

An RNA Aptamer Capable of Forming a Hydrogel by Self-Assembly

Hydrogels are supramolecular assemblies with both solute transport properties like liquids and mechanical properties like elastomers. To date, every type of biomolecules except ribonucleic acid (RNA), is capable of forming a hydrogel. Here, we report an RNA that forms a hydrogel by self-assembly. This RNA is originally identified by systematic evolution of ligands by exponential enrichment (SELEX) to enhance the activity of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptors as a potential RNA drug for the treatment of cognitive disorders. The RNA hydrogel exhibits an elastic modulus plateau on the order of 102 Pa and shows dynamic RNA chain interactions with relaxation behaviors similar to living wormlike micellar solutions. Small-angle X-ray scattering and cryogenic electron microscopy characterization support the RNA network structures. Here, by sequence mutation and rheological measurements, we reveal two key sequence motifs in the RNA responsible for intermolecular recognition and the formation of a polymer network by self-assembly.

59 BASIC BIOLOGICAL SCIENCES↗

Probing air-water interfaces of dibutyl phosphoric acid (HDBP) aqueous solutions using vibrational sum frequency generation (vSFG) spectroscopy

Liquid-liquid extraction is a separation technique implemented in a wide variety of areas, achieving particular success in both the nuclear and biomedical fields. In this work, vibrational sum frequency generation spectroscopy (VSFG) and surface tension measurements were used to investigate the adsorption of dibutyl phosphate (DBP) at air-aqueous interfaces to simulate liquid-liquid systems relevant to the Plutonium Uranium Redox Extraction (PUREX) Process. The objective of this work is to establish qualitative relationships between changes in the bulk aqueous phase concentrations of DBP and its concentration and structure at air-liquid interface as probed with VSFG. Nitric acid concentration and solution ionic strength were varied to examine their effect on the interfacial DBP.. Introduction of DBP into neat water resulted in reduction of the VSFG spectral intensity in the dangling O-H region (3680 – 3800 cm -1 ) but large increase in the H-bonded O-H stretch frequency region (3000 – 3500 cm-1) and the appearance of the CH 3 symmetric stretch and CH 3 Fermi resonance peaks at ~ 2880 and 2945 cm -1 , respectively, indicating DBP at the air-water interface. The intensity of the C-H strecth peaks increased as DBP concentration increased from 0.24 to 32 mM, accompanied by a decreasing surface tension values. At fixed DBP concentration, the addition of either or both of HNO 3 and NaNO 3 to an ionic strength of 1 M or 3 M led to significant reduction of the O-H VSFG peaks and enhancement of the C-H peaks. The origins of these experimental observations are attributed to both the increased HDBP molecules partitioning and adsorption to the interface and the protonation of the interfacial DBP- molecules.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effect of surface viscosity, anchoring energy, and cell gap on the response time of nematic liquid crystals

An analytical expression for the relaxation time of a nematic liquid crystal is obtained for the first time by considering the influence of surface viscosity, anchoring energy strength and cell gap, validated numerically by using the so-called relaxation method. This general equation for the molecular response time (τ{sub 0}) was derived for a vertical aligned cell and by solving an eigenvalue equation coming from the usual balance of torque equation in the Derzhanskii and Petrov formulation, recovering the usual equations in the appropriate limit. The results show that τ∼d{sup b}, where b=2 is observed only for strongly anchored cells, while for moderate to weak anchored cells, the exponent lies between 1 and 2, depending on both, surface viscosity and anchoring strength. We found that the surface viscosity is important when calculating the response time, specially for thin cells, critical for liquid crystal devices. The surface viscosity’s effect on the optical response time with pretilt is also explored. Our results bring new insights about the role of surface viscosity and its effects in applied physics. - Highlights: • The relaxation of nematic liquid crystals is calculated by taking the surface viscosity into account. • An analytical expression for the relaxation time depending on surface viscosity, anchoring strength and cell gap is obtained. • The results are numerically verified. • Surface viscosity is crucial for thin and weak anchored cells. • The effect on optical time and pretilt angle is also studied.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Experimental demonstration of hydraulic jump control in liquid metal channel flow using Lorentz force

Here in this paper, hydraulic jump control using electromagnetic force in a liquid metal flow is presented. The control methods used give insight into the hydraulic jump behavior in the presence of magnetic fields and electrical currents. Flowing liquid metals is a proposed solution to heat flux challenges posed in fusion reactors, specifically the tokamak. Unfortunately, thin, fast-flowing liquid metal divertor concepts for fusion reactors are susceptible to hydraulic jumps that drastically reduce the liquid metal flow speed, leading to potential problems such as excessive evaporation, unsteady power removal, and possible plasma disruption. Highly electrically conductive flows within the magnetic fields do not exhibit traditional hydraulic jump behavior. There is very little research investigating the use of externally injected electrical currents and magnetic fields to control liquid metal hydraulic jumps. By using externally injected electrical currents and a magnetic field, a Lorentz force (also referred to as j × B force) may be generated to control the liquid metal jump behavior. In this work, a free-surface liquid metal—GaInSn eutectic or “galinstan”$-$flow through an electrically insulating rectangular duct was investigated. It was shown that applying a Lorentz force has a repeatable and predictable impact on the hydraulic jump, which can be used for liquid metal control within next-generation fusion reactors.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Experimental demonstration of hydraulic jump control in liquid metal channel flow using Lorentz force

In this paper, hydraulic jump control using electromagnetic force in a liquid metal flow is presented. The control methods used give insight into the hydraulic jump behavior in the presence of magnetic fields and electrical currents. Flowing liquid metals is a proposed solution to heat flux challenges posed in fusion reactors, specifically the tokamak. Unfortunately, thin, fast-flowing liquid metal divertor concepts for fusion reactors are susceptible to hydraulic jumps that drastically reduce the liquid metal flow speed, leading to potential problems such as excessive evaporation, unsteady power removal, and possible plasma disruption. Highly electrically conductive flows within the magnetic fields do not exhibit traditional hydraulic jump behavior. There is very little research investigating the use of externally injected electrical currents and magnetic fields to control liquid metal hydraulic jumps. By using externally injected electrical currents and a magnetic field, a Lorentz force (also referred to as j × B force) may be generated to control the liquid metal jump behavior. In this work, a free-surface liquid metal—GaInSn eutectic or “galinstan”—flow through an electrically insulating rectangular duct was investigated. It was shown that applying a Lorentz force has a repeatable and predictable impact on the hydraulic jump, which can be used for liquid metal control within next-generation fusion reactors.

MHD↗

Physics and Chemistry of Te and HgTe-based Ternary Melts

Historically, the theoretical treatment of the liquid phases has always been more difficult and complicated than that for solid and gas phases. A liquid has no lattice structure as crystalline solids and the atoms/molecules in the liquid can migrate through it relatively rapidly. On the other hand, it is also interacting with many other atoms/molecules so that the simplifications of the kinetic theory of gases cannot be employed. For more complicated liquids, such as the liquids of high ionicity and those containing hydrogen bonds and electric dipoles, the understanding is far from complete. At the same time, accurate information on the physics and chemistry of semiconductor melts is needed for the quantitative descriptions of the process of crystal growth from melt. The pre-crystallization phenomena in the liquid phase are critical because the properties of the grown crystals depend on the state and structure of the melt as well as the thermal history of the melt during solidification process. However, the data on the liquid phase, such as thermophysical properties of semiconductor melts are scarce, especially for the HgTe-based II-VI ternary compound semiconductors because of their high vapor pressure and extreme toxicity. Analysis of the thermophysical properties of the melt can provide information about structural transitions of the melt during the solidification process. From a broader point of view, the structure of liquids is much more complicated than the crystalline solids, especially the relaxation behavior through different thermal histories. The theory of hetero-phase fluctuations of liquids is applicable to any many-body systems including condensed-matter physics, field theory, physics of nuclear-matter, cosmology, biology and even sociology. This book summarizes the physics and chemistry from the experimental measurements and theoretical analyses of phase diagram, thermodynamic properties, density, thermal conductivity, viscosity, and electrical conductivity on the binary, pseudo-binary and ternary melts of the most advanced IR-detector material systems of HgCdTe and HgZnTe as well as the analyses of these results. The main objectives of this study are: (1) to provide the phase diagrams and thermodynamic properties of Hg-Cd-Te and Hg-Zn-Te systems through quantitatively fitting the experimental data by assuming an associated solution model for the liquid phase, (2) to experimentally measure the thermophysical properties of the Hg-Cd-Te and Hg-Zn-Te melts, including density, viscosity, electrical conductivity and thermal conductivity as functions of temperature and composition and (3) to enhance the fundamental knowledge of hetero-phase fluctuations and relaxation phenomena in the melts and extend our understanding of the solidification process in order to interpret the experimental results of crystal growth so as to improve the melt growth processes of the compound semiconductor. The physics and chemistry of Te and HgTe-based ternary melts were explored through the studies of the structural transformation during melting, the supercooling during solidification, the relaxation phenomena after rapid cooling of the melts and the metal-semiconductor transition in the melts through the analyses of electrical conductivity and Lorenz number. An in-depth study on the thermophysical properties and their time-dependent structural dynamic processes taking place in the vicinity of the solid-liquid phase transition of the narrow homogeneity range HgTe-based ternary semiconductors as well as the analysis of the homogenization process in the melt will also be presented.

Thermophysical properties↗

Liquefaction dynamics of n-octadecane in cylindrical coordinates

The study presents one method of mathematically modeling the effects of gravity-induced free convection upon the melting phenomena of a finite paraffin slab. The theoretical model is based on the numerical computer solution of the solid phase and liquid phase energy equations, coupled with an imposed ideal-viscous flow approximation. An implicit alternating-direction technique is used as the finite-difference approximation for the basic energy equations in the numerical solution. The theoretical predictions are compared to experimental data from an annular test cell, in which n-octadecane, C18H38, was used as the test material. The results show that the model is a good first approximation to the solution of solid-liquid phase change involving gravity-induced free convection.

Bain, R. L.↗

A novel coupling of noise reduction algorithms for particle flow simulations

Proper orthogonal decomposition (POD) and its extension based on time-windows have been shown to greatly improve the effectiveness of recovering smooth ensemble solutions from noisy particle data. However, to successfully de-noise any molecular system, a large number of measurements still need to be provided. In order to achieve a better efficiency in processing time-dependent fields, we have combined POD with a well-established signal processing technique, wavelet-based thresholding. In this novel hybrid procedure, the wavelet filtering is applied within the POD domain and referred to as WAVinPOD. The algorithm exhibits promising results when applied to both synthetically generated signals and particle data. In this work, the simulations compare the performance of our new approach with standard POD or wavelet analysis in extracting smooth profiles from noisy velocity and density fields. Numerical examples include molecular dynamics and dissipative particle dynamics simulations of unsteady force- and shear-driven liquid flows, as well as phase separation phenomenon. Simulation results confirm that WAVinPOD preserves the dimensionality reduction obtained using POD, while improving its filtering properties through the sparse representation of data in wavelet basis. This paper shows that WAVinPOD outperforms the other estimators for both synthetically generated signals and particle-based measurements, achieving a higher signal-to-noise ratio from a smaller number of samples. The new filtering methodology offers significant computational savings, particularly for multi-scale applications seeking to couple continuum informations with atomistic models. It is the first time that a rigorous analysis has compared de-noising techniques for particle-based fluid simulations.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Improving the Regeneration of CO₂-Binding Organic Liquids with a Polarity Change

This paper describes an unusual solvent regeneration method unique to CO₂BOLs and other switchable ionic liquids; utilizing changes in polarity to shift the free energy of the system. The degree of CO₂ loading in CO₂BOLs is known to control the polarity of the solvent; conversely, polarity could be exploited as a means to control CO₂ loading. In this process, a chemically inert non-polar “antisolvent” is added to aid in de-complexing CO₂ from a CO₂-rich CO₂BOL. The addition of this polarity assist reduces temperatures required for regeneration of CO₂BOLs by as much as 76 °C. The lower regeneration temperatures realized with this polarity change allow for reduced solvent attrition and thermal degradation. Furthermore, the polarity assist shows considerable promise for reducing regeneration energy of CO₂BOL solvents, and separation of the CO₂BOL from the antisolvent is as simple as cooling the mixture below the upper critical solution temperature. Vapour-liquid equilibrium and liquid-liquid equilibrium measurements of a candidate CO₂BOL with CO₂ with and without an antisolvent were completed. From this data, we present the evidence and impacts of a polarity change on a CO₂BOL. Thermodynamic models and analysis of the system were constructed using ASPEN Plus, and forecasts preliminary process configurations and feasibility are also presented. Lastly, projections of solvent performance for removing CO₂ from a sub-critical coal fired power plant (total net power and parasitic load) are presented with and without this polarity assist and compared to DOE’s Case 10 MEA baseline.

Mathias, Paul M.↗

Structure and dynamics of aqueous solutions from PBE-based first-principles molecular dynamics simulations

Establishing an accurate and predictive computational framework for the description of complex aqueous solutions is an ongoing challenge for density functional theory based first-principles molecular dynamics (FPMD) simulations. In this context, important advances have been made in recent years, including the development of sophisticated exchange-correlation functionals. On the other hand, simulations based on simple generalized gradient approximation (GGA) functionals remain an active field, particularly in the study of complex aqueous solutions due to a good balance between the accuracy, computational expense, and the applicability to a wide range of systems. In such simulations we often perform them at elevated temperatures to artificially “correct” for GGA inaccuracies in the description of liquid water; however, a detailed understanding of how the choice of temperature affects the structure and dynamics of other components, such as solvated ions, is largely unknown. In order to address this question, we carried out a series of FPMD simulations at temperatures ranging from 300 to 460 K for liquid water and three representative aqueous solutions containing solvated Na + , K + , and Cl - ions. We show that simulations at 390–400 K with the Perdew-Burke-Ernzerhof (PBE) exchange-correlation functional yield water structure and dynamics in good agreement with experiments at ambient conditions. Simultaneously, this computational setup provides ion solvation structures and ion effects on water dynamics consistent with experiments. These results suggest that an elevated temperature around 390–400 K with the PBE functional can be used for the description of structural and dynamical properties of liquid water and complex solutions with solvated ions at ambient conditions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Conditioning of Boron-Containing Low and Intermediate Level Liquid Radioactive Waste - 12041

Improved cementation of low and intermediate level radioactive waste (ILW and LLW) aided by vortex electromagnetic treatment as well as silica addition was investigated. Positive effects including accelerated curing of boron-containing cement waste forms, improve end product quality, decreased product volume and reduced secondary LRW volume from equipment decontamination were established. These results established the possibility of boron-containing LRW cementation without the use of neutralizing alkaline additives that greatly increase the volume of the final product intended for long-term storage (burial). Physical (electromagnetic) treatment in a vortex mixer can change the state of LRW versus chemical treatment. By treating the liquid phase of cement solution only, instead of the whole solution, and using fine powder and nano-particles of ferric oxides instead of separable ferromagnetic cores for the activating agents the positive effect are obtained. VET for 1 to 3 minutes yields boron-containing LRW cemented products of satisfactory quality. Silica addition at 10 % by weight will accelerate curing and solidification and to decrease radionuclide leaching rates from boron-containing cement products. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

In situ x-ray photoelectron spectroscopy for electrochemical reactions in ordinary solvents

In situ electrochemical X-ray photoelectron spectroscopy (XPS) apparatus, which allows XPS at solid/liquid interfaces under potential control, was constructed utilizing a microcell with an ultra-thin Si membrane, which separates vacuum and a solution. Hard X-rays from a synchrotron source penetrate into the Si membrane surface exposed to the solution. Electrons emitted at the Si/solution interface can pass through the membrane and be analyzed by an analyzer placed in vacuum. Its operation was demonstrated for potential-induced Si oxide growth in water. Effect of potential and time on the thickness of Si and Si oxide layers was quantitatively determined at sub-nanometer resolution.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Extracted Water Induces Concentration Fluctuations in Model Ternary Liquid–Liquid Extraction System

Organic phase aggregation and phase splitting are two important (and connected) phenomena in liquid–liquid extraction of metal ions. Previously, we demonstrated how structure in binary mixtures of extractant and diluent originates from concentration fluctuations associated with the so-called “third-phase formation” liquid–liquid phase instability. For more complex systems, we sought to understand how extracted aqueous components affect these concentration fluctuations. Here, in this study, we use small-angle X-ray scattering and molecular dynamics simulations to investigate organic phase structural changes upon contact with water in a model ternary system of water/alkane/extractant. Critical exponents were determined from scattering with temperature variation and were consistent with mean field values. Then, by controlling the water content in the organic phase through direct dissolution of fixed quantities at constant temperature, we relate the observed increase in the fluctuation length scale to changes to the spinodal temperature of the third-phase formation phase boundary. We find a roughly linear relationship between water concentration and the spinodal temperature and a similar slope in that relationship for different linear alkane diluents. This suggests that the mechanism by which water extraction impacts the organic phase structure is to enhance concentration fluctuations through the introduction of additional polar extractant-water complexes, which increases the spinodal temperature and thereby decreases the reduced temperature, i.e., the distance to the instability. This explanation for how solutes induce aggregation in liquid–liquid extraction organic phases may extend to more complex systems, explaining the large increases in correlation lengths reported under high acid and metal loading.

Bonnett, Brittany L. [Argonne National Laboratory ↗

Impact of Water Extraction on Malonamide Aggregation: A Molecular Dynamics and Graph Theoretic Approach

Solution structure in liquid-liquid extraction affects the efficacy of separation; however, even for simplified organic phases, structural characterization and attribution of aggregation to intermolecular interactions are fundamental challenges. We investigate water uptake into organic phases for two malonamides commonly applied to actinide and lanthanide separations. Extracted water induces reorganization of the amphiphilic extractant molecules, although we find this rearrangement is not strongly manifested in small-angle X-ray scattering making it challenging to probe without methods such as atomistic simulation. Using a graph theoretic approach to define hydrogen bonded water/malonamide aggregates from molecular dynamics simulations, we find evidence of a characteristic aggregate size by water number that results from geometric accommodation of the surrounding malonamide molecules. Furthermore, this implies a degree of size selectivity inherent to these water-in-oil aggregates. Conversely, we find no evidence of a characteristic size of the aggregates with respect to their malonamide number. By defining a separate graphical representation of self-association of the amphiphilic malonamides, we quantify how water affects the local and nonlocal topology of the malonamide network, providing a basis for characterization of the structure and impact of polar solutes in increasingly complex organic phases.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Nanoscale insights into the structure of solution-processed graphene by x-ray scattering

Abstract Chemical exfoliation is an attractive approach for the synthesis of graphene due to its low cost and simplicity. However, challenges still remain in the characterization of solution-processed graphene, in particular with atomic resolution. Through this work we demonstrate the x-ray pair distribution function as a novel approach to study solution-processed graphene or other 2D materials with atomic resolution, directly in solution, produced by liquid-phase and electrochemical exfoliations. The results show the disappearance of long-range atomic correlations, in both cases, confirming the production of single and few-layer graphene. In addition, a considerable ring distortion has been observed as compared to graphite, irrespective of the solvent used: the normal surface angle to the sheet of the powder sample should be less than 6°, compatible with ripples formation observed in suspended graphene. We attribute this effect to the interaction of solvent molecules with the graphene nanosheets.

36 MATERIALS SCIENCE↗

Polymer coating of glass microballoons levitated in a focused acoustic field

Inertial confinement fusion (ICF) glass microballoons (GMBs) levitated in a focusing radiator acoustic device can be coated with liquid materials by deploying the liquid into the levitation field with a stepped-horn atomizer. The GMB can be forced to the center of the coating liquid with a strong acoustically generated centering force. Water solutions of organic polymers, UV-curable liquid organic monomers, and paraffin waxes have been used to prepare solid coatings on the surface of GMBs using this technique.

Young, A. T.↗

Characterization of the Hamamatsu VUV4 MPPCs for nEXO

In this paper we report on the characterization of the Hamamatsu VUV4 (S/N: S13370-6152) Vacuum Ultra-Violet (VUV) sensitive Silicon Photo-Multipliers (SiPMs) as part of the development of a solution for the detection of liquid xenon scintillation light for the nEXO experiment. Various SiPM features, such as: dark noise, gain, correlated avalanches, direct crosstalk and Photon Detection Efficiency (PDE) were measured in a dedicated setup at TRIUMF. SiPMs were characterized in the range 163 K = T = 233 K. At an over voltage of 3.1 ± 0.2 V and at T = 163 K we report a number of Correlated Avalanches (CAs) per pulse in the 1µs interval following the trigger pulse of 0.161±0.005. At the same settings the Dark-Noise (DN) rate is 0.137 ± 0.002 Hz/mm2. Both the number of CAs and the DN rate are within nEXO specifications. The PDE of the Hamamatsu VUV4 was measured for two different devices at T = 233 K for a mean wavelength of 189 ± 7 nm. At 3.6 ± 0.2 V and 3.5 ± 0.2 V of over voltage we report a PDE of 13.4 ± 2.6 % and 11 ± 2%, corresponding to a saturation PDE of 14.8 ± 2.8 % and 12.2±2.3%, respectively. Both values are well below the 24 % saturation PDE advertised by Hamamatsu. More generally, the second device tested at 3.5 ± 0.2 V of over voltage is below the nEXO PDE requirement. The first one instead yields a PDE that is marginally close to meeting the nEXO specifications. This suggests that with modest improvements the Hamamatsu VUV4 MPPCs could be considered as an alternative to the FBKLF SiPMs for the final design of the nEXO detector.

Gallina, G↗