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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Tracing and Forecasting Metabolic Indices of Cancer Patients Using Patient-Specific Deep Learning Models

We develop a patient-specific dynamical system model from the time series data of the cancer patient’s metabolic panel taken during the period of cancer treatment and recovery. The model consists of a pair of stacked long short-term memory (LSTM) recurrent neural networks and a fully connected neural network in each unit. It is intended to be used by physicians to trace back and look forward at the patient’s metabolic indices, to identify potential adverse events, and to make short-term predictions. When the model is used in making short-term predictions, the relative error in every index is less than 10% in the L ∞ norm and less than 6.3% in the L 1 norm in the validation process. Once a master model is built, the patient-specific model can be calibrated through transfer learning. As an example, we obtain patient-specific models for four more cancer patients through transfer learning, which all exhibit reduced training time and a comparable level of accuracy. This study demonstrates that this modeling approach is reliable and can deliver clinically acceptable physiological models for tracking and forecasting patients’ metabolic indices.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Distribution Substation Planning Toolkit (dsp-toolkit) v1.0

The Distribution Substation Planning Toolkit (DSP Toolkit) is a software suite designed to streamline the planning and optimization of distribution substations. This toolkit offers a comprehensive set of tools and APIs for data curation, short-term electric load forecasting, and weather-sensitive load adjustment, making it an essential resource for utility companies, engineers, and researchers. Features • Data Preprocessing and Curation: Efficiently manage and preprocess large datasets to ensure high-quality input for analysis. • Short-Term Load Forecasting: Utilize data-driven models to predict short-term electric loads accurately. • Weather-Sensitive Modeling: Automatically adjust load forecasts based on weather data to predict future peak demands more precisely. Uses The DSP Toolkit is ideal for planning and optimizing distribution substations, providing a user-friendly interface and comprehensive documentation. It is suitable for both novice and experienced users, facilitating efficient and accurate planning processes. Advantages • Efficiency: Automates complex planning tasks, reducing manual effort and minimizing errors. • Scalability: Handles large datasets and complex models, making it suitable for large-scale projects. • Community and Support: Open-source with active community contributions, ensuring continuous improvement and support. • Extensibility: Easily extendable with custom modules and plugins, allowing users to tailor the toolkit to their specific needs. The DSP Toolkit stands out by offering a robust, flexible, and user-friendly solution for distribution substation planning. Public Abstract

Li, Han [Lawrence Berkeley National Laboratory (LB↗
DOE OSTI2025

Short-Term Forecasting of Thermostatic and Residential Loads Using Long Short-Term Memory Recurrent Neural Networks

Internet of Things (IoT) devices in smart grids enable intelligent energy management for grid managers and personalized energy services for consumers. Investigating a smart grid with IoT devices requires a simulation framework with IoT devices modeling. However, there lack comprehensive study on the modeling of IoT devices in smart grids. This paper investigates the IoT device modeling of a thermostatic load and implements the recurrent neural networks model for short-term load forecasting in this IoT-based thermostatic load. The recurrent neural network structure is leveraged to build a load forecasting model on temporal correlation. The temporal recurrent neural network layers including long short-term memory cells are employed to learn the data from both the simulation platform and New South Wales residential datasets. The simulation results are provided for demonstration.

electric load forecasting↗
DOE OSTI2023

Tracking Aerosol Convection Interactions Experiment (TRACER) Field Campaign Report

Convective clouds serve a critical role in the Earth’s energy and water cycles through their transport of heat, moisture, momentum, and chemical species through the troposphere driving the global circulation (e.g., Hartmann et al. 1984, Del Genio et al. 2012, Su et al. 2014). On more local scales, convective clouds impact the atmospheric heating profile through diabatic heating effects, removal of water from the atmospheric column through precipitation, and conditioning of the local environment impacting further development of clouds (e.g., Sullivan and Voigt 2021). These critical roles underscore the importance of realistic representation of convective processes across scales of models from large-eddy simulation (LES), to convection-permitting models (CPM; e.g., Kendon et al. 2020, Marinescu et al. 2021), to numerical weather prediction (NWP) models used for operational weather forecasting, to Earth system models used to predict climate sensitivity (Sanderson et al. 2011, Sherwood et al. 2014, Tomassini et al. 2014, Zhao et al. 2016, Cronin et al. 2017). A key component of improving model representation of convective clouds is better quantification and parameterization of updraft microphysics and dynamics, including their interactions with the surrounding environment and storm organization (Bony et al. 2015, Hagos and Houze 2016, Donner et al. 2016, Morrison et al. 2020). Aerosol is an important environmental factor that could affect convective clouds and precipitation since cloud droplet and ice formation processes are initiated by it. Andrae et al. (2004) hypothesized that aerosols associated with increased biomass burning particles acting as cloud condensation nuclei (CCN) result in smaller and more monodisperse cloud droplets leading to suppression of warm rain formation, ultimately leading to more cloud water being lofted above the freezing level based on observations in the Amazon region. The subsequent increase in latent heat release increases the buoyancy of rising convective parcels invigorating the deep convection. This work was followed by a description of the theoretical basis for this “cold-phase invigoration” by Rosenfeld et al. (2008), who argued that it could have a significant effect for deep convective clouds with warm cloud-bases. Several modeling studies (e.g., Khain et al. 2005, 2009, van den Heever et al. 2006, Fan et al. 2007, 2009, 2012, Lee et al. 2008, Storer et al. 2010, Lebo et al. 2012, Storer and van den Heever 2013, Chen et al. 2020, Dagan et al. 2022) have investigated these aerosol-convection interactions and the environmental factors that influence their relative importance and magnitude. More recently, several studies have indicated that “warm-phase invigoration”, the enhancement of convection through condensational heating, also appears to play a role in enhancing both shallow cumuli (Seiki and Nakajima 2014, Saleeby et al 2015) and deeper tropical convection (Lebo and Seinfeld 2011, Khain et al. 2012, Sheffield et al 2015, Fan et al. 2018, Igel and van den Heever 2021), as well as Houston thunderstorms (Fan et al. 2007, 2020). However, still other studies have provided additional evidence of systematic biases in simulated convective outflow ice size distribution properties, which are consistent with a lack of poorly understood secondary ice production within convective updrafts (e.g., Fridlind et al. 2017). To help address these critical gaps in our understanding of cloud processes, aerosol processes and aerosol-cloud interactions, the Tracking Aerosol Convection Interactions Experiment was designed building upon efforts by the Aerosol, Cloud, Precipitation and Climate (ACPC) Initiative (http://acpcintiative.org/), a joint effort of the International Geosphere-Biosphere Programme (IGBP) and the World Climate Research Program (WCRP) that focused on resolving uncertainties in the interactions between aerosol and clouds towards better understanding the role that these interactions play in the climate system. The TRACER campaign was motivated by recommendations from a number of pilot studies undertaken by ACPC (van den Heever et al. 2017, Fridlind et al. 2019, Hu et al. 2019, Fan et al. 2020, Marinescu et al. 2021, Hernandez-Deckers et al. 2022) that pointed towards the southeastern Texas region as a locale where aerosol-convection interactions could be studied owing to the copious occurrence of isolated convection during the summer months accompanied by diverse and significant sources of aerosols from both anthropogenic and natural sources. The TRACER campaign began on 01 October 2021 and extended through 30 September 2022 with an intensive operational period (IOP) during June-September 2022. Three main sites (Table 1) were managed by the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) user facility.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Assessing Impacts of Waves on Hub-Height Winds off the U.S. West Coast Using Lidar Buoys and Coupled Modeling Approaches

Given the importance of offshore wind energy development to the U.S. clean energy targets, it is vital to be able to characterize the wind resource in that environment accurately. Toward that end, two Bureau of Ocean Energy Management buoys equipped with Doppler lidar are being maintained by Pacific Northwest National Laboratory on behalf of the Department of Energy and deployed to regions of potential offshore wind development. In addition to standard meteorological and oceanographic measurements, the buoys document the wind profile between about 40 m and 250 m above the sea surface through Doppler lidar retrievals. After a multiyear deployment of two buoys along the U.S. East Coast, the buoys were redeployed to the U.S. West coast from 2020 – 2022 to locations near the Humboldt and Morro Bay lease areas. The buoys provide nearly continuous, multiyear datasets that can be used to evaluate predictions of hub-height (~100 m) wind speed for standard atmospheric models in the region. In the absence of measurements at the study site, offshore wind developers rely on model-based data to assess site conditions. Potential sources of model error in this environment include under-resolution or misrepresentation of coastal topographically forced flows, marine boundary layer dynamics and the evolution of their associated cloud and turbulence fields, the role of upwelling and other currents on surface heat fluxes into the boundary layer, and the impact of wave fields on surface momentum fluxes and thus the wind speed profile. In particular, most predictive models of wind speed do not predict wave fields at all, relying on parameterizations to represent their effects. In thus study, we focus on evaluating the role of wind / wave interactions on modeled hub-height wind speed and error by using the Coupled Ocean–Atmosphere–Wave–Sediment–Transport Modeling System to capture two-way interactions between an atmospheric model (Weather Research and Forecasting (WRF)) and a wave model (WAVEWATCHIII (WW3)) and compare to both stand-alone WRF and one-way coupled WRF / WW3 configurations. Our approach is similar to that used in Gaudet et al. (2022) to evaluate wind / wave coupling over the U.S. East Coast, but applied to the very different environment of the U.S. West Coast. We show examples for two cases, a cold-season frontal case and a warm-season low-level jet case. We find that wind / wave coupling makes little impact on model error for these cases at the location of the lidar buoys, for which other misrepresentations of model physics seems to be responsible for model-observation discrepancies. However, domain-wide evaluations, which also make use of the National Buoy Data Center network, show that a two-way coupling approach is less prone to systematic errors in the hub-height wind field than the one-way coupled approach. WRF resolution of kilometer-scale or less is needed to properly capture the sharp wind speed gradients that can be found along the coastline, and WW3 simulations driven by the downscaled WRF produce better bulk and spectral wave fields when compared to observations. Implications of the results for wind resource characterization are then discussed.

17 WIND ENERGY↗
DOE OSTI2023

Grey-box and ANN-based building models for multistep-ahead prediction of indoor temperature to implement model predictive control

Model-based predictive control (MPC) strategies for heating, ventilation, and air-conditioning (HVAC) systems present an opportunity to lower building energy consumption and operational costs. Such approaches rely on the development of a model to precisely forecast building thermal dynamics, such as room air temperature or heating/cooling rate, and make control-related decisions. The control-oriented modeling of building energy systems should be accurate in predicting indoor conditions and present low computational complexity. These features are the key challenge of implementing advanced control methods such as MPC. Extant studies on building modeling for MPC have focused on step-ahead forecasting techniques to forecast building thermal dynamics, while multistep-ahead forecasting is essential. Moreover, machine learning model suitable in case of the domain-based engineering expertise are also not available. To this aim, we perform a comparative analysis of the grey-box model based on a resistance-capacitance (RC) thermal network and a machine learning model composed of an artificial neural network (ANN) for multistep-ahead prediction of building thermal dynamics using current and historical data. Actual experimental data obtained from the Flexible Research Platform (FRP) in Oak Ridge National Laboratory (US) are used for estimation and validation purposes. The average root mean squared error (RMSE) of the grey-box and ANN models are 0.89 °C and 1.02°C, respectively. Finally, the results indicate that the grey-box model outperforms the ANN model in the considered validation periods in terms of accuracy and prediction stability.

42 ENGINEERING↗
DOE OSTI2022

Deep Learning Provides Substantial Improvements to County‐Level Fire Weather Forecasting Over the Western United States

Abstract The recent wildfires in the western United States during 2018 and 2020 caused record‐breaking fire damage and casualties. Despite remarkable advances in fire modeling and weather forecasting, it remains challenging to anticipate catastrophic wildfire events and associated damage. One key missing component is a fire weather prediction system with sufficiently long lead time capable of providing useful regional details. Here, we develop a hybrid prediction model of wildfire danger called CFS with super resolution (CFS‐SR) as a proof of concept to fill that void. The CFS‐SR model is constructed by integrating the Climate Forecast System version 2 with a deep learning (DL) technique from Single Image Super Resolution, a method widely used in enhancing image resolution. We show that for the 2018–2019 fire season, the CFS‐SR model significantly improves accuracy in forecasting fire weather at lead times of up to 7 days with an enhanced spatial resolution up to 4 km. This level of high resolution provides county‐level fire weather forecast, making it more practical for allocating resources to mitigate wildfire danger. Our study demonstrates that a proper combination of ensemble climate predictions with DL techniques can boost predictability at finer spatial scales, increasing the utility of fire weather forecasts for practical applications.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Recursive Blind Forecasting of Photovoltaic Generation and Consumer Load for Microgrids

Existing forecasting frameworks that predict time-series photovoltaic (PV) generation and consumer load for micro-grids' operation and control assume near-continuous availability of real-time predictors from the field. The incoming data are used to periodically re-train the models and update forecast snapshots over a moving horizon window. However, such frameworks are not resilient to disruptions in data availability caused by losses in communications between the field sensors and data loggers. This paper bridges the shortcoming by leveraging a previously proposed forecasting framework that is resilient to abrupt changes in data quality caused by communication losses. Assuming no availability of real-time field system data, which is typical in extreme weather events such as hurricanes, the framework uses lightweight recursive time-series models to independently forecast solar irradiance, ambient temperature, PV power, and consumer load for three horizon windows: 24 hours, 12 hours, and 1 hour. Four types of ensemble-based regression trees-simple gradient boosted trees (GBR), GBR with an adaptive component (A-GBR), random forests (RF), and extra trees (ExTR)-are leveraged and their performances are compared against a simple historical weekly mean. Numerical results show that A-GBR performs better on average by 32% for 24-hour horizon and 39% for 12-hour horizon, whereas ExTR outdoes the other models on average by 10% for 1-hour horizon.

Sundararajan, Aditya↗
DOE OSTI2021

Improving the prediction of DNI with physics-based representation of all-sky circumsolar radiation

Direct normal irradiance (DNI) is often interpreted differently in ground measurements and forecasts using numerical weather prediction (NWP) models, leading to substantial bias in DNI forecasting especially under cloudy-sky conditions. To mitigate the bias, we use the Fast All-sky Radiation Model for Solar applications with DNI (FARMS-DNI) to conduct physics-based simulations of solar radiation in the circumsolar region. The DNI is quantified using the sum of the radiation along the sun direction and the scattered radiation within the circumsolar region. FARMS-DNI is coupled with the Weather Research and Forecasting model with solar extensions (WRF-Solar) to predict day-ahead DNI in 9-km pixels over an extended domain covering the contiguous United States. The DNI forecasts for the entire year of 2018 are validated using surface-based observations at the Atmospheric Radiation Measurement (ARM) and Surface Radiation Budget Network (SURFRAD) sites and a satellite-based solar radiation product developed by the procedure of the National Solar Radiation Data Base (NSRDB). The results show that the WRF-Solar coupled with the conventional Beer-Bouguer-Lambert law underestimes the overall DNI forecasts by 30%-60%, which is a joint effect of the uncertainties in computing the circumsolar radiation and forecasting cloud properties. This bias is significantly reduced by using FARMS-DNI.

14 SOLAR ENERGY↗
DOE OSTI2023

Machine Learning–Adjusted WRF Forecasts to Support Wind Energy Needs in Black Start Operations

Abstract The push for increased capacity of renewable sources of electricity has led to the growth of wind-power generation, with a need for accurate forecasts of winds at hub height. Forecasts for these levels were uncommon until recently, and that, combined with the nocturnal collapse of the well-mixed boundary layer and daytime growth of the boundary layer through the levels important for energy generation, has contributed to errors in numerical modeling of wind generation resources. The present study explores several machine learning algorithms to both forecast and correct standard WRF Model forecasts of winds and temperature at hub height within wind turbine plants over several different time periods that are critical for the anticipation of potential blackouts and aiding in black start operations on the power grid. It was found that mean square error for day-2 wind forecasts from the WRF Model can be improved by over 90% with the use of a multioutput neural network, and that 60-min forecasts of WRF error, which can then be used to adjust forecasts, can be made with an LSTM with great accuracy. Nowcasting of temperature and wind speed over a 10-min period using an LSTM produced very low error and especially skillful forecasts of maximum and minimum values over the turbine plant area.

17 WIND ENERGY↗
DOE OSTI2025

Geospatial Diffusion for Land Cover Imperviousness Change Forecasting

Land-use and land-cover (LULC) has a significant effect on several Earth system processes. For example, impervious surfaces reduce infiltration and speed water flow, impacting regional hydrology and flood risk. While Earth System models have improved forecasting hydrologic and atmospheric processes at higher resolutions, the ability to forecast LULC change has lagged behind. In this paper, we propose a new paradigm exploiting Generative AI (GenAI) for land cover change forecasting by framing it as a data synthesis problem conditioned on historical and auxiliary data-sources. To demonstrate the feasibility of our methodology, we perform experiments where a diffusion model is trained for decadal forecasting of imperviousness change across the entire United States. We find that our model yields MAE lower than a no-change baseline for resolutions ≥ 0.7 X 0.7km2 on average, demonstrating its ability to capture and project accurate spatiotemporal patterns. Finally, we discuss future research to incorporate Earth's physical properties and enabling scenario simulations via driver variables.

Varshney, Debvrat [ORNL] (ORCID:0000000188981736)↗
DOE OSTI2025

Effects of Atmosphere and Ocean Horizontal Model Resolution on Tropical Cyclone and Upper-Ocean Response Forecasts in Four Major Hurricanes

A coupled atmosphere–ocean model is necessary for tropical cyclone (TC) prediction to accurately characterize ocean feedback on atmospheric processes within the TC environment. Here, the ECMWF coupled global model is run at horizontal resolutions from 9 to 1.4 km in the atmosphere, as well as 25 and 8 km in the ocean, to identify how resolution impacts forecast accuracy of four observed major TCs in the Atlantic: Irma, Florence, Teddy, and Ida. Most of the resolutions used here are unprecedented for global models. GOES-16 and synthetic aperture radar (SAR) satellite images and best track data are used for atmospheric validation. Salinity and temperature observations from Air-Launched Autonomous Micro-Observer (ALAMO) floats are used to validate modeled upper-ocean response, including mixed layer deepening, sea surface cooling, and near-inertial waves in the wakes of TCs. Increasing atmospheric resolution leads to more realistic TC structure and stronger winds, significantly improving TC intensity forecasts and modestly improving track errors. Ocean resolution impacts the upper-ocean response but does not influence atmospheric forecasts for the fast-moving TCs considered here. Stronger mixing, sea surface cooling, and near-inertial oscillations are found for both higher atmosphere and ocean resolutions, provided the initial upper-ocean state is the same for the two ocean resolutions. Whether this agrees better with the ALAMO observations also depends on the realism of the initial upper-ocean state in the model, emphasizing the importance of ocean initialization for the accurate upper-ocean response. Overall, the model at all resolutions correctly predicts stronger mixing, surface cooling, and near-inertial oscillation amplitudes to the right of a TC center, as observed by ALAMO floats.

Atmosphere-ocean interaction↗
DOE OSTI2021

How Snow Aggregate Ellipsoid Shape and Orientation Variability Affects Fall Speed and Self-Aggregation Rates

Snow aggregate shapes and orientations have long been known to exhibit substantial variability. Despite this observed variability, most weather and climate prediction models use fixed power-law functions that deterministically map particle size to mass and fall speed. As such, integrated quantities like precipitation and self-aggregation rates currently ignore nonlinear effects resulting from variation in shape and orientation for aggregates of the same size. This study therefore develops an analytic framework that couples an empirically based bivariate distribution of ellipsoid shapes to classical hydrodynamic theory so as to capture an appropriate dispersion of masses, projected areas, and fall speeds for an assumed size distribution. For a fixed aggregate size, shape variations produce approximately ±0.13 m s -1 standard deviation of fall speed which increases the mass flux fall speed dispersion by more than 100% over traditional microphysics models. This increased fall speed dispersion results predominantly from shape-induced mass dispersion whereas orientation and drag dispersion play a lesser role. Shape variations can increase mass- and reflectivity-weighted fall speeds by up to 60% of traditional models whereas self-aggregation rates can increase by a factor of 100 for very small slope parameters. This implies that aggregate shape variations effectively forestall the theorized onset of fall speed distribution narrowing and subsequent quenching of the aggregation process. As a result, it is likely that secondary ice formation is necessary to prevent an ever decreasing slope parameter. The mathematical theory presented in this study is used to develop simple correction factors for snow forecast and climate models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Moving beyond the Aerosol Climatology of WRF-Solar: A Case Study over the North China Plain

Numerical weather prediction (NWP), when accessible, is a crucial input to short-term solar power forecasting. WRF-Solar, the first NWP model specifically designed for solar energy applications, has shown promising predictive capability. Nevertheless, few attempts have been made to investigate its performance under high aerosol loading, which attenuates incoming radiation significantly. The North China Plain is a polluted region due to industrialization, which constitutes a proper testbed for such investigation. Here, in this paper, aerosol direct radiative effect (DRE) on three surface shortwave radiation components (i.e., global, beam, and diffuse) during five heavy pollution episodes is studied within the WRF-Solar framework. Results show that WRF-Solar overestimates instantaneous beam radiation up to 795.3 W m -2 when the aerosol DRE is not considered. Although such overestimation can be partially offset by an underestimation of the diffuse radiation of about 194.5 W m -2 , the overestimation of the global radiation still reaches 160.2 W m -2 . This undesirable bias can be reduced when WRF-Solar is powered by Copernicus Atmosphere Monitoring Service (CAMS) aerosol forecasts, which then translates to accuracy improvements in photovoltaic (PV) power forecasts. This work also compares the forecast performance of the CAMS-powered WRF-Solar with that of the European Centre for Medium-Range Weather Forecasts model. Under high aerosol loading conditions, the irradiance forecast accuracy generated by WRF-Solar increased by 53.2% and the PV power forecast accuracy increased by 6.8%.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Variational data augmentation for a learning-based granular predictive model of power outages

As the trend in climate change continues, extreme weather events are expected to occur with increasing frequency and severity and pose a significant threat to the electric power infrastructure. Regardless of the efforts a utility puts towards hardening the grid, storm-induced damage to the utility assets such as cables and distributed energy resources (DERs) that are particularly vulnerable to such events is unavoidable. Access to a highly granular, in space and time, outage forecasting tool with long lead times (i.e., days ahead) will enhance the efficiency of service restoration efforts. Here, in this study, we propose to develop and implement a multi-model framework as an operational tool based on a granular and multi-day outage forecasting model using operational numerical weather prediction model forecasts and detailed component outage information. An innovative two-layered recurrent neural network, i.e., a long-short-term-memory (LSTM)-based variational autoencoder (VAE) framework and a sliding window are used to address the uneven distribution of different types of weather events and make better use of the time-series data. Case studies are performed to demonstrate the performance of the new framework.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Should Sea-Ice Modeling Tools Designed for Climate Research Be Used for Short-Term Forecasting?

In theory, the same sea-ice models could be used for both research and operations, but in practice, differences in scientific and software requirements and computational and human resources complicate the matter. Although sea-ice modeling tools developed for climate studies and other research applications produce output of interest to operational forecast users, such as ice motion, convergence, and internal ice pressure, the relevant spatial and temporal scales may not be sufficiently resolved. For instance, sea-ice research codes are typically run with horizontal resolution of more than 3 km, while mariners need information on scales less than 300 m. Certain sea-ice processes and coupled feedbacks that are critical to simulating the Earth system may not be relevant on these scales; and therefore, the most important model upgrades for improving sea-ice predictions might be made in the atmosphere and ocean components of coupled models or in their coupling mechanisms, rather than in the sea-ice model itself. This paper discusses some of the challenges in applying sea-ice modeling tools developed for research purposes for operational forecasting on short time scales, and highlights promising new directions in sea-ice modeling.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

CovTransformer: A transformer model for SARS-CoV-2 lineage frequency forecasting

With hundreds of SARS-CoV-2 lineages circulating in the global population, there is an ongoing need for predicting and forecasting lineage frequencies and thus identifying rapidly expanding lineages. Accurate prediction would allow for more focused experimental efforts to understand pathogenicity of future dominating lineages and characterize the extent of their immune escape. Here, we first show that the inherent noise and biases in lineage frequency data make a commonly-used regression-based approach unreliable. To address this weakness, we constructed a machine learning model for SARS-CoV-2 lineage frequency forecasting, called CovTransformer, based on the transformer architecture. We designed our model to navigate challenges such as a limited amount of data with high levels of noise and bias. We first trained and tested the model using data from the UK and the USA, and then tested the generalization ability of the model to many other countries and US states. Remarkably, the trained model makes accurate predictions two months into the future with high levels of accuracy both globally (in 31 countries with high levels of sequencing effort) and at the US-state level. Our model performed substantially better than a widely used forecasting tool, the multinomial regression model implemented in Nextstrain, demonstrating its utility in SARS-CoV-2 monitoring. Assuming a newly emerged lineage is identified and assigned, our test using retrospective data shows that our model is able to identify the dominating lineages 7 weeks in advance on average before they became dominant. Overall, our work demonstrates that transformer models represent a promising approach for SARS-CoV-2 forecasting and pandemic monitoring.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

Evaluating the Accuracy of Machine Learning Forecasts

To improve the accuracy of forecasting in machine learning, we must investigate multiple machine learning models and see how accurately they can predict values after training. We used seven machine learning models to try and get more accurate predictions. The models that were used were ARIMA, SES, MLP, CART, LightGBM, and XGBoost. We used a processed dataset from a Terminal at LAX that had the number of people traveling through terminal X every hour in March from 2015-2019. We trained our models with the dates March 6 - March 19 to predict the value for March 20th and the hours 6:00 am to 6:00 pm since those are the most popular traveling hours. By using the different models, we had varying results of accuracy when estimating the amount of people traveling through terminal X on March 20th. We know that machine learning models are helpful for forecasting and by seeing how accurately these models can predict, we can see how forecasting can be helpful for other issues. Using these methods, airports can use forecasting to predict the amount of people coming in and out and can use these predictions to prepare their resource management, operational efficiency, and overall passenger experience.

97 MATHEMATICS AND COMPUTING↗