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At least 667 records · Page 37

Litter Production and Foliar Nutrient Resorption in Pioneer and Non-Pioneer Species in a Selective Logging Experiment in the Central Amazon, BIONTE, ZF-2, Manaus, 2022-23

This dataset was collected near the city of Manaus, Brazil, at the Experimental Station of Tropical Forestry (EEST, aka “ZF2”), inside the BIONTE (BIOmass and NuTrient Experiment). The experiment included three levels of increasing selective logging intensity, along with control, with 1-hectare permanent plots (12 total) located at the center of 4-hectare treatment plots. The vegetation has a high floristic diversity, the soils of the region are poor in nutrients, and the topography is characterized by plateaus (where BIONTE is located), and also valley bottoms and slopes. Three treatments of differing logging intensities were applied in the BIONTE experiment (T1, T2 and T3). The study was conducted in Treatment 3 (Block I – permanent plot), which represents the most intensive logging treatment, with 69% of the basal area (m²∙ha⁻¹) removed in 1988. The present dataset spans the period from May 1, 2022, to May 1, 2023. The data package includes leaf_nutrient_data, litterfall_total_data, leaf_litterfall_species_specific_data, and species_info, all provided in .csv format. These formats allow users to process and analyze the data in various software applications and programming languages, such as Python and R. This dataset was collected to advance knowledge on nutrient cycling in Amazonian forests, specifically distinguishing between species with two distinct functional traits: fast-growing and slow-growing. It also aims to improve Earth System Models, such as the E3SM Functionally Assembled Terrestrial Ecosystem Simulator (FATES). Additionally, it was used in a paper currently in preparation (Carvalho et al., in prep.), which aims to quantify seasonal litter production and foliar nutrient resorption in pioneer (fast-growing) and non-pioneer (slow-growing) tree species in the central Amazon. Specifically, it seeks to answer two key questions: 1) Is there a difference in leaf litter production, leaf nutrient flux and leaf nutrient concentration between pioneers and non-pioneers species? Is there a difference in the efficiency of foliar nutrient resorption between pioneers and non-pioneers species?

54 ENVIRONMENTAL SCIENCES↗

Metagenome-assembled genomes measured at 3 depths during snowmelt period in East River, CO (March, May, and June, September 2017)

Snowmelt is a critical biogeochemical period that accounts for large nitrogen (N) export events from high-elevation watersheds. Soil microbial populations bloom and immobilize N during snowmelt, yet the population size crashes in spring, which releases a pulse of soil N. We sought to discover the N sources fueling this microbial bloom and determine the fate of N following microbial die-off. Here, focusing on the snowmelt period within a headwater catchment of the Upper Colorado River Basin (East River, CO), we deployed strain-resolved metagenomics to identify the metabolic pathways and processes that mobilize soil N during and after snowmelt. Soil metagenome samples were taken from 6 snowpits from 3 depths (0-5cm, 5-15cm, >15cm) at 4 time points during snowmelt period (March 2017, May 2017, and June 2017, September 2017) generating 48 metagenomes. We reconstructed 474 metagenome-assembled genomes (MAGs) across all metagenomes.All 48 metagenomes were sequenced at JGI and raw data can be found under JGI (Joint Genome Institute) GOLD Study Gs0135149. Metagenome assemblies from IMG under the same study were used for genome binning. This dataset (1) a zip file of 474 MAGs (as fasta files, Gs0135149_bins_tar.gz), (2) sample metadata file with sample IGSNs (International Generic Sample Numbers) (samples.csv), (3) bounding box coordinates for the sampled locations (Gs0135149.kml), (4) metagenome metadata file listing IMG/M (Integrated Microbial Genomes/Metagenomes) metagenome accessions linking samples to metagenomes (metagenomes.csv), (5) location metadata file (locations.csv), (6) file-level metadata file (flmd.csv) and (7) data dictionary (dd.csv) file.This work was supported by the Watershed Function Science Focus Area at Lawrence Berkeley National Laboratory funded by the US Department of Energy, Office of Science, Biological and Environmental Research under Contract No. DE-AC02-05CH11231.

54 ENVIRONMENTAL SCIENCES↗

Data for Kim et al., "Variations in the optical and molecular composition of dissolved organic matter exported from coastal wetlands"

Knowledge about sources and composition of marsh-derived dissolved organic matter (DOM) is critical for understanding the role of marshes in coastal biogeochemical cycling and the fate of marsh-derived DOM in the ocean. To investigate tidal variability in composition of marsh-derived DOM, Kim et al. examined the optical and molecular characteristics of hourly surface water samples at three tidal creeks in the Chesapeake Bay. Groundwater samples along the terrestrial landscape gradient as well as estuarine water from the adjacent estuary at each site were also collected to help resolve sources of surface water DOM. Samples were collected in summer 2024 at three sites – SWH: Sweet Hall Marsh, GCW: Kirkpatrick Marsh, and GWI: Goodwin Islands – which are part of synoptic sites in the Chesapeake Bay region of the COMPASS-FME (Coastal Observations, Mechanisms, and Predictions Across Systems and Scales - Field, Measurements, and Experiments) project. Surface water samples were collected hourly over a 48-hour period at each site. Groundwater and estuarine water samples were collected once. This dataset includes- Surface water depth and salinity- Dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) concentrations- Optical indices and relative composition of parallel factor analysis (PARAFAC) components- High resolution mass spectrometry data.

54 ENVIRONMENTAL SCIENCES↗

Reactive Transport Modeling of Anthropogenic Carbon Mineralization in Stacked Columbia River Basalt Reservoirs

Numerical simulation of CO2 storage in basalts and related reactive lithologies requires modeling complex, coupled hydrologic and chemical processes, including multi-phase flow and transport, partitioning of CO2 into the aqueous phase, and chemical interactions with aqueous fluids and rock minerals. We conducted reactive transport simulations of the Wallula pilot-scale CO2 injection into the flow tops of the Grande Ronde Basalt using our PNNL STOMP-CO2 simulator with the ECKEChem reactive module. Our mineralization simulation of the ~1,000 tons of injected CO2 into the interflow zones was based on the hydrologic transport model we previously developed. For this work, the simulations considered geochemical reactions involving the basalt components, precipitates, formation brine, and injected CO2. In our benchmark case, carbonate minerals precipitated, resulting in ~20% of the CO2 being mineralized in 10 years. Increasing the reaction rate of a single primary mineral phase (clinopyroxene) by an order of magnitude resulted in a carbon mineralization reaction extent of ~90% over the same time interval. Based on these initial sensitivity analysis results, it is clear that a thorough understanding of primary mineral dissolution rates is required for accurately predicting long-term fate and transport of injected CO2 into basalt formations. Our reactive transport numerical simulations will be key components of commercial-scale CO2 storage operation permitting, de-risking, and optimization in mafic and ultramafic reservoirs.

Cao, Ruoshi↗

Red–green–blue Boolean image analysis of particulate debris laced with luminescent tracers

Abstract Particulate mass estimation from 3-pixel images is desirable in many fields. Red–green–blue (RGB) analysis and Boolean logic were shown to estimate the mass of luminescent tracers in microscopic images. With a controlled background intensity, an estimation error of 1.8 to 3.5% was achieved; in uncontrolled backgrounds, an error of about 18% was achieved. RGB analysis is a valuable tool for spatial location of particulates. This work shows it is possible to estimate the particulate mass in an image and gives RGB an extension into mass quantification that has far-reaching impacts in fields involving the fate and transport of particulate matter. Graphical abstract

36 MATERIALS SCIENCE↗

Characterization of Pliocene and Miocene Formations in the Wilmington Graben, Offshore Los Angeles, for Large-Scale Geologic Storage of CO2

The project Characterization of Pliocene and Miocene Formations in the Wilmington Graben, Offshore Los Angeles, for Large-Scale Geologic Storage of CO2 is one of 9 site characterization projects that were implemented as part of ARRA (American Recovery and Reinvestment Act). Data from this project was used to improve resolution of data in NATCARB in the area of study. Data related to this study has already been incorporated in NATCARB Atlas. The Los Angeles Basin presents an opportunity for large-scale geologic CO2 storage. Due to its large population and historical and geologic setting as one of the most prolific oil and gas producing basins in the United States, the region is home to more than 12 major power plants and oil refineries that produce more than 5 million metric tons of fossil fuel-related CO2 emissions each year. GeoMechanics Technologies worked to characterize the Pliocene and Miocene sediments in the Wilmington Graben, offshore of Los Angeles, California, for high-volume CO2 storage. The Graben is located offshore of the Los Angeles and Long Beach Harbor area, making it accessible yet geologically isolated from the nearby Wilmington oilfield and onshore areas. These sediments span more than 5,000 feet of vertical interval with an estimated storage resource of more than 100 million metric tons of CO2. The project team analyzed and interpreted existing geologic data within the region, including detailed exploration well log data and 2-D and 3-D seismic data. New seismic lines were acquired to fill in current data gap areas and two new characterization wells were drilled and logged. This information was integrated with existing geologic interpretations for adjacent onshore areas to help characterize optimal areas for CO2 storage and seals to safely store CO2. Integrated 3-D geologic and geomechanical models for the Wilmington Graben were developed to simulate the fate and transport of injected CO2 in the subsurface and to assess risks. This project contributed to the understanding of injectivity, containment mechanisms, rate of dissolution and mineralization, and storage capacity of the Wilmington Graben and associated analogous basins. This effort also provided greater insight into the potential for offshore geologic formations to safely and permanently store CO2.

.las↗

Cdkn1a transcript variant 2 is a marker of aging and cellular senescence

Cellular senescence is a cell fate response characterized by a permanent cell cycle arrest driven primarily the by cell cycle inhibitor and tumor suppressor proteins p16 Ink4a and p21 Cip1/Waf1 . In mice, the p21 Cip1/Waf1 encoding locus, Cdkn1a , is known to generate two transcripts that produce identical proteins, but one of these transcript variants is poorly characterized. We show that the Cdkn1a transcript variant 2, but not the better-studied variant 1, is selectively elevated during natural aging across multiple mouse tissues. Importantly, mouse cells induced to senescence in culture by genotoxic stress (ionizing radiation or doxorubicin) upregulated both transcripts, but with different temporal dynamics: variant 1 responded nearly immediately to genotoxic stress, whereas variant 2 increased much more slowly as cells acquired senescent characteristics. Upon treating mice systemically with doxorubicin, which induces widespread cellular senescence in vivo , variant 2 increased to a larger extent than variant 1. Variant 2 levels were also more sensitive to the senolytic drug ABT-263 in naturally aged mice. Thus, variant 2 is a novel and more sensitive marker than variant 1 or total p21 Cip1/Waf1 protein for assessing the senescent cell burden and clearance in mice.

60 APPLIED LIFE SCIENCES↗

Perturbative and nonperturbative studies of CFTs with MN global symmetry

Fixed points in three dimensions described by conformal field theories with \ensuremath{M N}_{m,n} = O(m)^n\rtimes S_n M N m , n = O ( m ) n ⋊ S n global symmetry have extensive applications in critical phenomena. Associated experimental data for m=n=2 m = n = 2 suggest the existence of two non-trivial fixed points, while the \varepsilon ε expansion predicts only one, resulting in a puzzling state of affairs. A recent numerical conformal bootstrap study has found two kinks for small values of the parameters m m and n n , with critical exponents in good agreement with experimental determinations in the m=n=2 m = n = 2 case. In this paper we investigate the fate of the corresponding fixed points as we vary the parameters m m and n n . We find that one family of kinks approaches a perturbative limit as m m increases, and using large spin perturbation theory we construct a large m m expansion that fits well with the numerical data. This new expansion, akin to the large N N expansion of critical O(N) O ( N ) models, is compatible with the fixed point found in the \varepsilon ε expansion. For the other family of kinks, we find that it persists only for n=2 n = 2 , where for large m m it approaches a non-perturbative limit with \Delta_\phi\approx 0.75 Δ ϕ ≈ 0.75 . We investigate the spectrum in the case \ensuremath{M N}_{100,2} M N 100 , 2 and find consistency with expectations from the lightcone bootstrap.

74 ATOMIC AND MOLECULAR PHYSICS↗

Toxicology and Biodegradability of Tier Three Gasoline Blendstocks: Literature Review of Available Data

This study provides framework for decision makers to more fully evaluate the toxicology and biodegradability of the tier three gasoline blendstocks developed under Co-Optima. These Co-Optima blendstocks were compared to gasoline surrogate compounds, providing guidance for future consideration as the project progresses. Due to the complexity of the subject area, all compounds were considered only in their pure form, not as complex mixtures with gasoline, which was outside the scope of this study. The metrics applied to the blendstocks were environmental transport and fate, environmental and human health toxicity, and environmental regulatory framework. The blendstocks (cyclopentanone; diisobutylene; 2-methylfuran; 2,5-dimethylfuran; isobutanol; ethanol; and isopropanol) presented limited human toxicity based on the information available. All the blendstocks migrated primarily into air or water, with little mobility between these compartments. Coupled with aerobic and/or anaerobic biodegradability, long term environmental persistence is unlikely, with the only exception being diisobutylene, which was not biodegradable. Additional work should focus on the environmental impact of these blendstocks in complex mixtures, such as gasoline, which will represent more real world scenarios.

09 BIOMASS FUELS↗

Synthesis and Characterization of Novel Actinide Compounds (LDRD External Report Summary)

It is important to gain new understanding of actinides in order to understand the fate of these elements in the environment and the factors that contribute to actinide-lanthanide extraction selectivity. Detailed structural, magnetic, and electronic studies of novel actinide compounds can provide useful information on bonding behavior to guide the development of novel separation and environmental remediation strategies. Development of new actinide compounds remains a relatively open area to study due to the numerous challenges faced when performing chemical synthesis with radioactive materials. In this LDRD, we sought to synthesize and characterize single crystals of novel polyoxometalates that selectively encapsulate plutonium and uranium. We were successful in preparation of [U III Pd II 12 (AsPh) 8 O 32 ] 5⁻ ; the first actinide-based polyoxopalladate.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

Integrated Oxygen Production and CO 2 Separation through Chemical Looping Combustion with Oxygen Uncoupling (Final Report)

The project "Integrated Oxygen Production and CO 2 Separation through Chemical Looping Combustion with Oxygen Uncoupling" focused on advancing fluidized bed chemical looping combustion technology to semi-pilot scale. An important aspect of technology scale-up is production of well-performing oxygen carrier materials economically and at a scale sufficient for industrial-scale systems. Under this program, a new technique for oxygen carrier production was developed and a prototype system capable of producing up to 150 lb per batch of oxygen carrier was constructed. Chemical looping combustion testing was performed in a large process development unit designed for operation at more than 200 kW using coal as fuel. Complementary evaluation of carbon conversion pathways was conducted and quantitative analysis of the fate of carbon in a CLOU-based chemical looping system was performed. As an aid for design, optimization, troubleshooting and scale-up, robust CFD models for fluidized bed chemical looping combustion systems were developed.

01 COAL, LIGNITE, AND PEAT↗

Iodine Distribution During Evaporation of Hanford Waste Treatment Plant Direct Feed Low Activity Waste Effluent Management Facility Simulant

The Hanford Waste Treatment and Immobilization Plant (WTP) Low Activity Waste (LAW) vitrification facility will generate an aqueous condensate recycle stream from the off-gas system. The baseline plan for disposition of this stream during full WTP operations is to send it to the WTP Pretreatment Facility, where it will be blended with LAW, concentrated by evaporation, and recycled to the LAW vitrification facility. However, during the Direct Feed LAW (DFLAW) scenario, planned disposition of this stream involves concentrating the condensate in a new evaporator at the Effluent Management Facility (EMF) and returning it to the LAW melter. The LAW melter condensate stream will contain components, e.g. halides and sulfates, that are volatile at melter temperatures, have limited solubility in glass waste forms, and present a material corrosion concern. Further, some minor constituents in the melter condensate, such as volatile organic compounds and iodine, have been found to be at least partially volatile in the EMF. The condensate from the EMF will be sent to the Hanford Effluent Treatment Facility (ETF). The presence of some recalcitrant organics and iodine, as 129I, are expected to be problematic in the ETF. In order to better predict and prepare for the distribution of organics and 129I in the flowsheet, it is key to understand their chemistry and experimentally determine their behavior during evaporation. To do this, modeling and testing were performed to examine the speciation of iodine under relevant conditions, as well as determine partitioning of iodine and the organics in the EMF evaporator. This overall program examines the potential treatment and immobilization of the LAW melter condensate stream to enable alternative disposal. The objective of this task was to (1) perform modeling to determine the speciation and fate of iodine species, (2) prepare a simulant of the LAW Melter Off-gas Condensate expected during DFLAW operations, (3) spike in the key volatile organics and non-radioactive iodine, and (4) demonstrate evaporation in order to predict the final composition of the effluents from the EMF evaporator to aid in planning for their disposition. The results of the modeling of iodine speciation indicate that the iodine is expected to remain in the evaporator pot as iodide and possibly iodate ion if the pH is raised to 11.5-12, which is the planned condition for the EMF. Experimental testing confirmed that the iodide remained in the evaporator concentrate and was below detection limits in all condensate and knock-out pot samples, indicating it was not volatile. The organic nitrile compounds that were added to the simulant were absent from the evaporator feed solution, either lost through evaporation, or more likely, decomposition. The acetone and methylene chloride were below the target values in the feed and condensate samples, and were presumably lost to evaporation or decomposition.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Multifactor Experiment and Model Integration to Determine the Regional Vulnerability of Permafrost Carbon to Climate Change. Final report

The major research goal of this project was to understand and quantify the fate of carbon stored in permafrost ecosystems using a combination of field and laboratory experiments to measure and model isotope ratios and carbon fluxes in a tundra ecosystem exposed to experimental warming. Field measurements centered on a two-factor experimental warming to increase air and soil temperatures alone, and in combination, at a tundra field site in Alaska. A second manipulation of water table was embedded within the warming treatment such that both major environmental factors (temperature, moisture) controlling ecosystem carbon dynamics were experimentally altered. The experiment was interfaced with modeling activities using both data assimilation and forward modeling approaches. Models were used to make forecasts of ecosystem carbon dynamics beyond the time frame and environmental space of the experiment itself. These results were linked with ongoing synthesis and model intercomparison activities through the Permafrost Carbon Network, which led to additional synthesis publications as a result of collaboration and data sharing from this project. As key outcomes, this project has produced new papers published in the peer-reviewed literature, archived datasets used for model-data intercomparisons, trained graduate students and postdoctoral researchers, and has raised awareness about the vulnerability of permafrost carbon to a wider audience.

54 ENVIRONMENTAL SCIENCES↗

Status of SRNL Radiological Field Lysimeter Experiment (RadFLEx) – Year 7

The Radiological Field Lysimeter Experiment (RadFLEx) began in 2012 and is a collaboration between the Savannah River National Laboratory (SRNL) and Clemson University. The purpose of this facility is to study the long-term (2 to 20 years) fate and transport of radionuclides in the Savannah River Site (SRS) vadose zone under natural field and meteorological conditions. The unique facility houses 48 5-L cores filled with sediments amended with various radionuclide sources. The results from these studies have been applied to the development of geochemical models used to assess the risk posed by subsurface nuclear waste disposal, environmental remediation, and waste form development. This report describes the refurbishment of the exterior of the RadFLEx facility and the synthesis and deployment of six plutonium(Pu) sources, four neptunium (Np) sources and one radium (Ra) source. It is anticipated that these newly installed lysimeter cores will be studied for up to 10 years.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Deep Underground Neutrino Experiment (DUNE), Far Detector Technical Design Report, Volume II: DUNE Physics

The preponderance of matter over antimatter in the early universe, the dynamics of the supernovae that produced the heavy elements necessary for life, and whether protons eventually decay -- these mysteries at the forefront of particle physics and astrophysics are key to understanding the early evolution of our universe, its current state, and its eventual fate. DUNE is an international world-class experiment dedicated to addressing these questions as it searches for leptonic charge-parity symmetry violation, stands ready to capture supernova neutrino bursts, and seeks to observe nucleon decay as a signature of a grand unified theory underlying the standard model. The DUNE far detector technical design report (TDR) describes the DUNE physics program and the technical designs of the single- and dual-phase DUNE liquid argon TPC far detector modules. Volume II of this TDR, DUNE Physics, describes the array of identified scientific opportunities and key goals. Crucially, we also report our best current understanding of the capability of DUNE to realize these goals, along with the detailed arguments and investigations on which this understanding is based. This TDR volume documents the scientific basis underlying the conception and design of the LBNF/DUNE experimental configurations. As a result, the description of DUNE's experimental capabilities constitutes the bulk of the document. Key linkages between requirements for successful execution of the physics program and primary specifications of the experimental configurations are drawn and summarized. This document also serves a wider purpose as a statement on the scientific potential of DUNE as a central component within a global program of frontier theoretical and experimental particle physics research. Thus, the presentation also aims to serve as a resource for the particle physics community at large.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Development of Saturated Zone Three-Dimensional Initial Condition Plumes for the Composite Analysis and Cumulative Impacts Evaluation Modeling

The purpose of this environmental calculation file (ECF) is to document and present the methodology, input data, and results of extending two-dimensional (2-D) plume depictions documented in DOE/RL- 2017-66, Hanford Site Groundwater Monitoring for 2017, into three dimensions (3-D) for select contaminants of interest (COIs) in the 200-BP-5, 200-UP-1, 200-ZP-1, and 200-PO-1 Groundwater Operable Units at the Hanford Site. Plumes with sufficient available vertical profile data were interpolated in 3-D using the Leapfrog Geo®1 geologic modeling platform, which includes an interpolation engine for analyzing and visualizing 3-D data. Results of these interpolations are intended for use in developing inputs for transport modeling to support forecasts of Central Plateau contaminant plume fate and transport.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Model Package Report: Plateau to River Groundwater Model Version 8.3

This model package report documents the groundwater flow component of the Plateau to River Groundwater Model (P2R Model), which is a groundwater flow and contaminant fate and transport (F&T) simulation model used to support remedial activities conducted by CH2M HILL Plateau Remediation Company at the Hanford Site in Washington State. The objective of this report is to describe the modeling objectives, conceptualization, model implementation, calibration, sensitivity, uncertainty, configuration control, limitations, and future model enhancements of the groundwater flow component of the P2R Model.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Biogeochemical reactions and release of iron-bound organic carbon during the redox processes. Final report

Accurate simulation and prediction for reactions of soil organic carbon (OC) under different biogeochemical conditions remain a grand challenge. This project aims to investigate the transformation and degradation of OC under anaerobic and aerobic conditions as well as anaerobic-aerobic transitions, as well as its coupling with reactions for iron (Fe) oxide minerals. We determined that OC can serve as electron shuttle (including pyrogenic OC) and donor for accelerating the reduction of Fe oxide. The presence of OC can inhibit the transformation of poor crystalline Fe oxide (ferrihydrite) to other more crystalline forms. Reduction of Fe oxide can lead to the mobilization of OC, depending on the ratio of OC/Fe. More condensed aromatic OC can be selectively associated with Fe oxide and also resistant to the reduction release, enhancing their stability during the anaerobic reactions. Under aerobic condition, the association with Fe oxide can inhibit the degradation of OC and also its priming effects on the degradation of indigenous soil OC. During an anaerobic-aerobic transition, OC mineralization was inhibited substantially compared to controls incubated only aerobically. Our field measurement in the Arctic region revealed the importance of deep soil temperature in regulating the generation of CO 2 and CH 4 . These results highlighted the importance of redox reactions in controlling the fate and stability of soil OC. For future studies, investigations are required to fill in the knowledge gap regarding the structure and chemical nature of important organic ligands for Fe, accurate quantification of Fe-bound OC in soils, the long-term effects of anaerobic-aerobic transitions on the OC mineralization as well as response of microbial communities to redox transitions.

54 ENVIRONMENTAL SCIENCES↗