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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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DOE OSTI2019

Review, Evaluation, and Directions for Gene-Targeted Assembly for Ecological Analyses of Metagenomes

Shotgun metagenomics has greatly advanced our understanding of microbial communities over the last decade. Metagenomic analyses often include assembly and genome binning, computationally daunting tasks especially for big data from complex environments such as soil and sediments. In many studies, however, only a subset of genes and pathways involved in specific functions are of interest; thus, it is not necessary to attempt global assembly. In addition, methods that target genes can be computationally more efficient and produce more accurate assembly by leveraging rich databases, especially for those genes that are of broad interest such as those involved in biogeochemical cycles, biodegradation, and antibiotic resistance or used as phylogenetic markers. Here, we review six gene-targeted assemblers with unique algorithms for extracting and/or assembling targeted genes: Xander, MegaGTA, SAT-Assembler, HMM-GRASPx, GenSeed-HMM, and MEGAN. We tested these tools using two datasets with known genomes, a synthetic community of artificial reads derived from the genomes of 17 bacteria, shotgun sequence data from a mock community with 48 bacteria and 16 archaea genomes, and a large soil shotgun metagenomic dataset. We compared assemblies of a universal single copy gene (rplB) and two N cycle genes (nifH and nirK). We measured their computational efficiency, sensitivity, specificity, and chimera rate and found Xander and MegaGTA, which both use a probabilistic graph structure to model the genes, have the best overall performance with all three datasets, although MEGAN, a reference matching assembler, had better sensitivity with synthetic and mock community members chosen from its reference collection. Also, Xander and MegaGTA are the only tools that include post-assembly scripts tuned for common molecular ecology and diversity analyses. Additionally, we provide a mathematical model for estimating the probability of assembling targeted genes in a metagenome for estimating required sequencing depth.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2020

Utilizing Temperature and Brine Inflow Measurements to Constrain Reservoir Parameters During a Salt Heater Test

Brine availability in salt has multiple implications for the safety and design of a nuclear waste storage facility. Brine availability includes both the distribution and transport of brine through a damaged zone around boreholes or drifts excavated into the salt. Coupled thermal, hydrological, mechanical, and chemical processes taking place within heated bedded salt are complex; as part of DECOVALEX 2023 Task E this study takes a parsimonious modeling approach utilizing analytical and numerical one-dimensional simulations to match field measurements of temperature and brine inflow around a heater. The one-dimensional modeling results presented arrive at best-fit thermal conductivity of intact salt, and the permeability and porosity of damaged salt of 5.74 W/m∙K, 10 –17 m 2 , and ≈ 0.02, respectively.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

NASA NTRS1977

Strain gage calibration of a complex wing

Modern complex structural arrangements have complicated the task of measuring flight loads with calibrated strain gages. This paper examines the use of a relatively simple structural model to characterize the load responses of strain gages located on various spars of a delta wing. Strains measured during a laboratory load calibration of a wing structure are compared with calculations obtained from a simplified NASA structural analysis (NASTRAN) model. Calculated and measured influence coefficient plots that show the shear, bending, and torsion characteristics of typical strain-gage bridges are presented. Typical influence coefficient plots are given for several load equations to illustrate the derivation of the equations from the component strain-gage bridges. A relatively simple structural model was found to be effective in predicting the general nature of strain distributions and influence coefficient plots. The analytical processes are shown to be useful in obtaining a good load calibration. The analytical processes cannot, however, be used in lieu of an actual load calibration of an aircraft wing.

Jenkins, J. M.↗

NASA NTRS1984

Space simulation in the next 20 years

This is a brief overview of logically expected advancements in the area of space simulation over the next twenty years. Current NASA Space Shuttle simulations will be upgraded to support more complex payload and on-orbit tasks. This includes the ability to integrate various remote ground facilities with a real time space mission simulator and an expanded use of efficient part-task simulations. Software compatibilities between simulators will increase and each simulator will have a more combined training and engineering role. Software development processors will be increasingly internetted to an integrated data processing system.

Knorre, M. J.↗

NASA NTRS1983

Data flow methods for dynamic system simulation - A CSSL-IV microcomputer network interface

A major problem in employing networks of microcomputers for the real-time simulation of complex systems is to allocate computational tasks to the various microcomputers in such a way that idle time and time lost in interprocess communication is minimized. The research reported in this paper is directed to the development of a software interface between a higher-level simulation language and a network of microcomputers. A CSSL-IV source program is translated to a data flow graph. This graph is then analyzed automatically so as to allocate computing tasks to the various processors.

Makoui, A.↗

NASA NTRS1986

Free vibration and dynamic response analysis of spinning structures

The proposed effort involved development of numerical procedures for efficient solution of free vibration problems of spinning structures. An eigenproblem solution procedure, based on a Lanczos method employing complex arithmetic, was successfully developed. This task involved formulation of the numerical procedure, FORTRAN coding of the algorithm, checking and debugging of software, and implementation of the routine in the STARS program. A graphics package for the E/S PS 300 as well as for the Tektronix terminals was successfully generated and consists of the following special capabilities: (1) a dynamic response plot for the stresses and displacements as functions of time; and (2) a menu driven command module enabling input of data on an interactive basis. Finally, the STARS analysis capability was further improved by implementing the dynamic response analysis package that provides information on nodal deformations and element stresses as a function of time. A number of test cases were run utilizing the currently developed algorithm implemented in the STARS program and such results indicate that the newly generated solution technique is significantly more efficient than other existing similar procedures.

Source record↗

NASA NTRS1987

A Lanczos eigenvalue method on a parallel computer

Eigenvalue analyses of complex structures is a computationally intensive task which can benefit significantly from new and impending parallel computers. This study reports on a parallel computer implementation of the Lanczos method for free vibration analysis. The approach used here subdivides the major Lanczos calculation tasks into subtasks and introduces parallelism down to the subtask levels such as matrix decomposition and forward/backward substitution. The method was implemented on a commercial parallel computer and results were obtained for a long flexible space structure. While parallel computing efficiency for the Lanczos method was good for a moderate number of processors for the test problem, the greatest reduction in time was realized for the decomposition of the stiffness matrix, a calculation which took 70 percent of the time in the sequential program and which took 25 percent of the time on eight processors. For a sample calculation of the twenty lowest frequencies of a 486 degree of freedom problem, the total sequential computing time was reduced by almost a factor of ten using 16 processors.

Bostic, Susan W.↗

NASA NTRS1987

A Lanczos eigenvalue method on a parallel computer

Eigenvalue analyses of complex structures is a computationally intensive task which can benefit significantly from new and impending parallel computers. This study reports on a parallel computer implementation of the Lanczos method for free vibration analysis. The approach used here subdivides the major Lanczos calculation tasks into subtasks and introduces parallelism down to the subtask levels such as matrix decomposition and forward/backward substitution. The method was implemented on a commercial parallel computer and results were obtained for a long flexible space structure. While parallel computing efficiency is problem and computer dependent, the efficiency for the Lanczos method was good for a moderate number of processors for the test problem. The greatest reduction in time was realized for the decomposition of the stiffness matrix, a calculation which took 70 percent of the time in the sequential program and which took 25 percent of the time on eight processors. For a sample calculation of the twenty lowest frequencies of a 486 degree of freedom problem, the total sequential computing time was reduced by almost a factor of ten using 16 processors.

Bostic, Susan W.↗

NASA NTRS1990

Usefulness of heart measures in flight simulation

The results of three studies performed at the NASA Langley Research Center are presented to indicate the areas in which heart measures are useful for detecting differences in the workload state of subjects. Tasks that involve the arousal of the sympathetic nervous system, such as landing approaches, were excellent candidates for the use of average heart-rate and/or the increase in heart-rate during a task. The latter of these two measures was the better parameter because it removed the effects of diurnal variations in heart-rate and some of the intersubject variability. Tasks which differ in the amount of mental resources required are excellent candidates for heart-rate variability measures. Heart-rate variability measures based upon power spectral density techniques were responsive to the changing task demands of landing approach tasks, approach guidance options, and 2 versus 20 second interstimulus-intervals of a monitoring task. Heart-rate variability measures were especially sensitive to time-on-task when the task was characterized by minimal novelty, complexity, and uncertainty (i.e., heart-rate variability increases as a function of the subjects boredom).

Harris, Randall L., Sr.↗

NASA NTRS1994

Teams and teamwork at NASA Langley Research Center

The recent reorganization and shift to managing total quality at the NASA Langley Research Center (LaRC) has placed an increasing emphasis on teams and teamwork in accomplishing day-to-day work activities and long-term projects. The purpose of this research was to review the nature of teams and teamwork at LaRC. Models of team performance and teamwork guided the gathering of information. Current and former team members served as participants; their collective experience reflected membership in over 200 teams at LaRC. The participants responded to a survey of open-ended questions which assessed various aspects of teams and teamwork. The participants also met in a workshop to clarify and elaborate on their responses. The work accomplished by the teams ranged from high-level managerial decision making (e.g., developing plans for LaRC reorganization) to creating scientific proposals (e.g., describing spaceflight projects to be designed, sold, and built). Teams typically had nine members who remained together for six months. Member turnover was around 20 percent; this turnover was attributed to heavy loads of other work assignments and little formal recognition and reward for team membership. Team members usually shared a common and valued goal, but there was not a clear standard (except delivery of a document) for knowing when the goal was achieved. However, members viewed their teams as successful. A major factor in team success was the setting of explicit a priori rules for communication. Task interdependencies between members were not complex (e.g., sharing of meeting notes and ideas about issues), except between members of scientific teams (i.e., reliance on the expertise of others). Thus, coordination of activities usually involved scheduling and attendance of team meetings. The team leader was designated by the team's sponsor. This leader usually shared power and responsibilities with other members, such that team members established their own operating procedures for decision making. Sponsors followed a hands-off policy during team operations, but they approved and reviewed team products. Most teams, particularly high-level decision-making teams, had little or no authority to carry out their decisions. Team members had few interpersonal conflicts. They monitored each other respectfully about meeting deadlines. Feedback and backup behaviors were seen as desirable aspects of teamwork, wanted by the members, and done appropriately.

Dickinson, Terry L.↗

NASA NTRS2000

Computer Modeling of Real-Time Dynamic Lighting

Space Station tasks involve procedures that are very complex and highly dependent on the availability of visual information. In many situations, cameras are used as tools to help overcome the visual and physical restrictions associated with space flight. However, these cameras are effected by the dynamic lighting conditions of space. Training for these is conditions is necessary. The current project builds on the findings of an earlier NRA funded project, which revealed improved performance by humans when trained with computer graphics and lighting effects such as shadows and glare.

Maida, James C.↗

NASA NTRS2004

Development of Level 3 (gridded) products for the Atmospheric Infrared Sounder (AIRS)

The Atmospheric Infrared Sounder (AIRS) sounding system is a suite of infrared and microwave instruments flown as part of NASA's Earth Observing System (EOS) onboard the Aqua platform. The AIRS dataset provides a daily, global view of Earth processes at a finer vertical resolution than ever before. However, analysis of the AIRS data is a daunting task given the sheer volume and complexity of the data. The volume of data produced by the EOS project is unprecedented; the AIRS project alone will produce many terabytes of data over the lifetime of the mission. This paper describes development of AIRS Level 3 data products that will help to alleviate problems of access and usability.

data reduction↗

NASA NTRS2007

Sensitive Quantitative Assessment of Balance Disorders

Computerized dynamic posturography (CDP) has become a standard technique for objectively quantifying balance control performance, diagnosing the nature of functional impairments underlying balance disorders, and monitoring clinical treatment outcomes. We have long used CDP protocols to assess recovery of sensory-motor function in astronauts following space flight. The most reliable indicators of post-flight crew performance are the sensory organization tests (SOTs), particularly SOTs 5 and 6, which are sensitive to changes in availability and/or utilization of vestibular cues. We have noted, however, that some astronauts exhibiting obvious signs of balance impairment after flight are able to score within clinical norms on these tests, perhaps as a result of adopting competitive strategies or by their natural skills at substituting alternate sensory information sources. This insensitivity of the CDP protocol could underestimate of the degree of impairment and, perhaps, lead to premature release of those crewmembers to normal duties. To improve the sensitivity of the CDP protocol we have introduced static and dynamic head tilt SOT trials into our protocol. The pattern of postflight recovery quantified by the enhanced CDP protocol appears to more aptly track the re-integration of sensory-motor function, with recovery time increasing as the complexity of sensory-motor/biomechanical task increases. The new CDP protocol therefore seems more suitable for monitoring post-flight sensory-motor recovery and for indicating to crewmembers and flight surgeons fitness for return to duty and/or activities of daily living. There may be classes of patients (e.g., athletes, pilots) having motivation and/or performance characteristics similar to astronauts whose sensory-motor treatment outcomes would also be more accurately monitored using the enhanced CDP protocol. Furthermore, the enhanced protocol may be useful in early detection of age-related balance disorders.

Paloski, Willilam H.↗

NASA NTRS2010

Utilization of ISS to Develop and Test Operational Concepts and Hardware for Low-Gravity Terrestrial EVA

NASA has considerable experience in two areas of Extravehicular Activities (EVA). The first can be defined as microgravity, orbital EVAs. This consists of everything done in low Earth orbit (LEO), from the early, proof of concept EVAs conducted during the Gemini program of the 1960s, to the complex International Space Station (ISS) assembly tasks of the first decade of the 21st century. The second area of expertise is comprised of those EVAs conducted on the lunar surface, under a gravitational force one-sixth that of Earth. This EVA expertise encapsulates two extremes - microgravity and Earthlike gravitation - but is insufficient as humans expand their exploration purview, most notably with respect to spacewalks conducted on very low-gravity bodies, such as near- Earth objects (NEO) and the moons of Mars. The operational and technical challenges of this category of EVA have yet to be significantly examined, and as such, only a small number of operational concepts have been proposed thus far. To ensure mission success, however, EVA techniques must be developed and vetted to allow the selection of operational concepts that can be utilized across an assortment of destinations whose physical characteristics vary. This paper examines the utilization of ISS-based EVAs to test operational concepts and hardware in preparation for a low-gravity terrestrial EVA. While the ISS cannot mimic some of the fundamental challenges of a low-gravity terrestrial EVA - such as rotation rate and surface composition - it may be the most effective test bed available.

Gast, Matthew A.↗

NASA NTRS2010

A Toolset for Supporting Iterative Human Automation: Interaction in Design

The addition of automation has greatly extended humans' capability to accomplish tasks, including those that are difficult, complex and safety critical. The majority of Human - Automation Interact~on (HAl) results in more efficient and safe operations, ho,,:,ever ~ertain un~~pected a~tomatlon behaviors or "automation surprises" can be frustrating and, In certain safety critical operations (e.g. transport~tion, manufacturing control, medicine), may result in injuries or. the loss of life.. (Mellor, 1994; Leveson, 1995; FAA, 1995; BASI, 1998; Sheridan, 2002). This pap~r describes ~he development of a design tool that enables on the rapid development and evaluation. of automat~on prototypes. The ultimate goal of the work is to provide a design platform upon which automation surprise vulnerability analyses can be integrated.

Feary, Michael S.↗

NASA NTRS2010

Augmented Adaptive Control of a Wind Turbine in the Presence of Structural Modes

Wind turbines operate in highly turbulent environments resulting in aerodynamic loads that can easily excite turbine structural modes, potentially causing component fatigue and failure. Two key technology drivers for turbine manufacturers are increasing turbine up time and reducing maintenance costs. Since the trend in wind turbine design is towards larger, more flexible turbines with lower frequency structural modes, manufacturers will want to develop methods to operate in the presence of these modes. Accurate models of the dynamic characteristics of new wind turbines are often not available due to the complexity and expense of the modeling task, making wind turbines ideally suited to adaptive control. In this paper, we develop theory for adaptive control with rejection of disturbances in the presence of modes that inhibit the controller. We use this method to design an adaptive collective pitch controller for a high-fidelity simulation of a utility-scale, variable-speed wind turbine operating in Region 3. The objective of the adaptive pitch controller is to regulate generator speed, accommodate wind gusts, and reduce the interference of certain structural modes in feedback. The control objective is accomplished by collectively pitching the turbine blades. The adaptive pitch controller for Region 3 is compared in simulations with a baseline classical Proportional Integrator (PI) collective pitch controller.

Frost, Susan A.↗

NASA NTRS2010

Integrating Beneficiation into Regolith Conveyance Systems

Regolith conveyance includes hauler/dumpers, hoppers, augers, pneumatic transport subsystems, and other elements. The features of the conveyance and the time the material stream spend in conveyance may be used synergistically to perform beneficiation, pre-processing (such as heating), and other tasks, thus reducing the mass and complexity of the overall ISRU system. Since the cost of spaceflight is largely driven by the cost of launching mass out of Earth's gravity well, the conveyance system should be leveraged in this way to the maximum extent.

Metzger, Philip T.↗

NASA NTRS2006

Representation of Serendipitous Scientific Data

A computer program defines and implements an innovative kind of data structure than can be used for representing information derived from serendipitous discoveries made via collection of scientific data on long exploratory spacecraft missions. Data structures capable of collecting any kind of data can easily be implemented in advance, but the task of designing a fixed and efficient data structure suitable for processing raw data into useful information and taking advantage of serendipitous scientific discovery is becoming increasingly difficult as missions go deeper into space. The present software eases the task by enabling definition of arbitrarily complex data structures that can adapt at run time as raw data are transformed into other types of information. This software runs on a variety of computers, and can be distributed in either source code or binary code form. It must be run in conjunction with any one of a number of Lisp compilers that are available commercially or as shareware. It has no specific memory requirements and depends upon the other software with which it is used. This program is implemented as a library that is called by, and becomes folded into, the other software with which it is used.

James, Mark↗