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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 667 records · Page 37
All sourcesNASA NTRSDOE OSTI
DOE OSTI2018

GSTS-Uzawa method for a class of complex singular saddle point problems

In this paper, we propose GSTS–Uzawa method for solving a class of complex singular saddle point problems based on generalized skew-Hermitian triangular splitting (GSTS) iteration method and classical Uzawa method. We research on its semi-convergence properties and the eigenvalues distributions of its preconditioned matrix. The resulting GSTS–Uzawa preconditioner is used to precondition Krylov subspace methods such as the restarted generalized minimal residual (GMRES) method for solving the equivalent formulation of the complex singular saddle point problems. The theoretical results and effectiveness of the GSTS–Uzawa method are supported by a numerical example.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Numerical approach based on fractional-order Lagrange polynomials for solving a class of fractional differential equations

In this study, we propose a new set of fractional functions based on the Lagrange polynomials to solve a class of fractional differential equations. Fractional differential equations are the best tools for modelling natural phenomenon that are elaborated by fractional calculus. Therefore, we need an accurate and efficient technique for solving them. The main purpose of this article is to generalize new functions based on Lagrange polynomials to the fractional calculus. At first, we present a new representation of Lagrange polynomials and in continue, we propose a new set of fractional-order functions which are called fractional-order Lagrange polynomials (FLPs). Besides, a general formulation for operational matrices of fractional integration and derivative of FLPs on arbitrary nodal points are extracted. These matrices are obtained using Laplace transform. The initial value problems is reduced to the system of algebraic equations using the operational matrix of fractional integration and collocation method. Also, we find the upper bound of error vector for the fractional integration operational matrix and we indicate convergence of approximations of FLPs. Illustrative examples are included to demonstrate the validity and applicability of the proposed technique.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Reachable set bounding for a class of bidirectional associative memory NNSs with Markov jump switching parameters

This paper studies the problem how to estimate the reachable set for a class of delayed bidirectional associative memory neural network systems (NNSs), which have Markov switching parameters and unit-energy or unit-peak bounded disturbance inputs. The feature of the Markov jump bidirectional associative memory NNSs shows in the following twofold: the time delay is time varying; the transition rates is time varying. Moreover, the time-varying transition rates is piecewise constant. Using the Lyapunov functional method, delay-partitioning and linear matrix inequalities techniques, the estimate problem of the reachable set depending on time delay is solved. The effectiveness of the given results is illustrated by the proposed numerical examples.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

A class of efficient difference method for time fractional reaction–diffusion equation

The fractional reaction–diffusion equation has profound physical background and theoretical connotation, and its numerical methods are of great scientific significance and practical value. In this paper, a class of explicit–implicit (E–I) difference method and implicit–explicit (I–E) difference method are proposed for one-dimensional time fractional reaction–diffusion equation. The methods are constructed by combining classical explicit scheme and classical implicit scheme. The existence, uniqueness and convergence of solutions are given for E–I and I–E schemes. Theoretical analysis and numerical experiments show that the E–I and I–E schemes are unconditionally stable, with second-order spatial accuracy and 2−α order temporal accuracy. Compared with the classical implicit difference method with the similar accuracy, the computation time of the presented methods is improved by nearly 41%. It is shown that the E–I difference method and I–E difference method are effective for solving the time fractional reaction–diffusion equation.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

A numerical approach for solving a class of variable-order fractional functional integral equations

This paper proposes new discretization techniques to estimate variable-order fractional integral operators based on the piecewise integro quadratic spline interpolation. The proposed methods are modified to solve a class of variable-order fractional functional integral equations. Moreover, we investigate the performance of the proposed methods by solving the variable-order fractional pantograph and Emden–Fowler functional integral equations.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2013

Dynamics of zero-energy nonspreading non-Gaussian wave packets for a class of central potentials

Zero-energy wave packets, coherent states, are constructed in such a way that they retain their shape during the time evolution for a large class of central potentials. The packets are not of the Gaussian type with −r{sup 2} dependence but, instead, their shape is determined by −r{sup 1/(μ+1/2)} with −1/2<μ<1/2. A very close quantum–classical correspondence is also shown, i.e., the well localized states travel along suitable classical trajectories. -- Highlights: •Central potentials are considered. •Nonspreading, non-Gaussian wave packets are constructed. •Time evolution of the zero-energy packets is studied. •Quantum–classical correspondence is discussed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2015

A new class of asymptotically non-chaotic vacuum singularities

The BKL conjecture, stated in the 1960s and early 1970s by Belinski, Khalatnikov and Lifschitz, proposes a detailed description of the generic asymptotic dynamics of spacetimes as they approach a spacelike singularity. It predicts complicated chaotic behaviour in the generic case, but simpler non-chaotic one in cases with symmetry assumptions or certain kinds of matter fields. Here we construct a new class of four-dimensional vacuum spacetimes containing spacelike singularities which show non-chaotic behaviour. In contrast with previous constructions, no symmetry assumptions are made. Rather, the metric is decomposed in Iwasawa variables and conditions on the asymptotic evolution of some of them are imposed. The constructed solutions contain five free functions of all space coordinates, two of which are constrained by inequalities. We investigate continuous and discrete isometries and compare the solutions to previous constructions. Finally, we give the asymptotic behaviour of the metric components and curvature.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2018

Faddeev–Jackiw quantization of topological invariants: Euler and Pontryagin classes

Highlights: •We report the symplectic analysis for Euler and Pontryagin invariants. •We report the Faddeev–Jackiw constraints. •A symplectic tensor is constructed. •The generalized Faddeev–Jackiw brackets are found. •The quantum Faddeev–Jackiw constraints are solved. -- Abstract: The symplectic analysis for the four dimensional Pontryagin and Euler invariants is performed within the Faddeev–Jackiw context. The Faddeev–Jackiw constraints and the generalized Faddeev–Jackiw brackets are reported; we show that in spite of the Pontryagin and Euler classes give rise the same equations of motion, its respective symplectic structures are different to each other. In addition, a quantum state that solves the Faddeev–Jackiw constraints is found, and we show that the quantum states for these invariants are different to each other. Finally, we present some remarks and conclusions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2011

Suppression of TLR4-mediated inflammatory response by macrophage class A scavenger receptor (CD204)

Highlights: {yields} We focused on the interaction between SR-A and TLR4 signaling in this study. {yields} SR-A deletion promoted NF{kappa}B activation in macrophages in septic model mouse. {yields} SR-A suppresses both MyD88-dependent and -independent TLR4 signaling in vitro. {yields} SR-A clears LPS binding to TLR4 which resulting in the suppression of TLR4 signals. -- Abstract: The class A scavenger receptor (SR-A, CD204), one of the principal receptors expressed on macrophages, has been found to regulate inflammatory response and attenuate septic endotoxemia. However, the detailed mechanism of this process has not yet been well characterized. To clarify the regulative mechanisms of lipopolysaccharide (LPS)-induced macrophage activation by SR-A, we evaluated the activation of Toll-like receptor 4 (TLR4)-mediated signaling molecules in SR-A-deficient (SR-A{sup -/-}) macrophages. In a septic shock model, the blood levels of tumor necrosis factor (TNF)-{alpha}, interleukin (IL)-6 and interferon (IFN)-{beta} were significantly increased in SR-A{sup -/-} mice compared to wild-type mice, and elevated nuclear factor kappa B (NF{kappa}B) activation was detected in SR-A{sup -/-} macrophages. SR-A deletion increased the production of pro-inflammatory cytokines, and the phosphorylation of mitogen-activated protein kinase (MAPK) and NF{kappa}B in vitro. SR-A deletion also promoted the nuclear translocation of NF{kappa}B and IFN regulatory factor (IRF)-3. In addition, a competitive binding assay with acetylated low-density lipoprotein, an SR-A-specific ligand, and anti-SR-A antibody induced significant activation of TLR4-mediated signaling molecules in wild-type macrophages but not in SR-A{sup -/-} macrophages. These results suggest that SR-A suppresses the macrophage activation by inhibiting the binding of LPS to TLR4 in a competitive manner and it plays a pivotal role in the regulation of the LPS-induced inflammatory response.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

Infantile hemangioma-derived stem cells and endothelial cells are inhibited by class 3 semaphorins

Class 3 semaphorins were discovered as a family of axon guidance molecules, but are now known to be involved in diverse biologic processes. In this study, we investigated the anti-angiogenic potential of SEMA3E and SEMA3F (SEMA3E&F) in infantile hemangioma (IH). IH is a common vascular tumor that involves both vasculogenesis and angiogenesis. Our lab has identified and isolated hemangioma stem cells (HemSC), glucose transporter 1 positive (GLUT1{sup +}) endothelial cells (designated as GLUT1{sup sel} cells) based on anti-GLUT1 magnetic beads selection and GLUT1-negative endothelial cells (named HemEC). We have shown that these types of cells play important roles in hemangiogenesis. We report here that SEMA3E inhibited HemEC migration and proliferation while SEMA3F was able to suppress the migration and proliferation in all three types of cells. Confocal microscopy showed that stress fibers in HemEC were reduced by SEMA3E&F and that stress fibers in HemSC were decreased by SEMA3F, which led to cytoskeletal collapse and loss of cell motility in both cell types. Additionally, SEMA3E&F were able to inhibit vascular endothelial growth factor (VEGF)-induced sprouts in all three types of cells. Further, SEMA3E&F reduced the level of p-VEGFR2 and its downstream p-ERK in HemEC. These results demonstrate that SEMA3E&F inhibit IH cell proliferation and suppress the angiogenic activities of migration and sprout formation. SEMA3E&F may have therapeutic potential to treat or prevent growth of highly proliferative IH. - Highlights: • SEMA3E&F reduce actin stress fibers and induce cytoskeletal collapse in HemEC. • SEMA3E&F inhibit angiogenic activities of HemEC. • SEMA3E&F can interrupt the VEGF-A-VEGFR2-ERK signaling pathway in HemEC. • Plexin D1 and NRP2 are induced during HemSC/GLUT1{sup sel}-to-EC differentiation.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

Role of protein kinase A and class II phosphatidylinositol 3-kinase C2β in the downregulation of KCa3.1 channel synthesis and membrane surface expression by lyso-globotriaosylceramide

The intermediate conductance calcium-activated potassium channel (KCa3.1) mediates proliferation of many cell types including fibroblasts, and is a molecular target for intervention in various cell proliferative diseases. Our previous study showed that reduction of KCa3.1 channel expression by lyso-globotriaosylceramide (lyso-Gb3) inhibits differentiation into myofibroblasts and collagen synthesis, which might lead to development of ascending thoracic aortic aneurysm secondary to Fabry disease. However, how lyso-Gb3 downregulates KCa3.1 channel expression is unknown. Therefore, we aimed to investigate the underlying mechanisms of lyso-Gb3-mediated KCa3.1 channel downregulation, focusing on the cAMP signaling pathway. We found that lyso-Gb3 increased the intracellular cAMP concentration by upregulation of adenylyl cyclase 6 and inhibited ERK 1/2 phosphorylation through the protein kinase A (PKA) pathway, leading to the inhibition of KCa3.1 channel synthesis, not the exchange protein directly activated by cAMP (Epac) pathway. Moreover, lyso-Gb3 suppressed expression of class II phosphatidylinositol 3-kinase C2β (PI3KC2β) by PKA activation, which reduces the production of phosphatidylinositol 3-phosphate [PI(3)P], and the reduced membrane surface expression of KCa3.1 channel was recovered by increasing the intracellular levels of PI(3)P. Consequently, our findings that lyso-Gb3 inhibited both KCa3.1 channel synthesis and surface expression by increasing intracellular cAMP, and controlled surface expression through changes in PI3KC2β-mediated PI(3)P production, suggest that modulation of PKA and PI3KC2β activity to control of KCa3.1 channel expression can be an alternative important target to attenuate ascending thoracic aortic aneurysms in Fabry disease. - Highlights: • Lyso-Gb3 causes elevation of intracellular cAMP. • Lyso-Gb3 inhibits the ERK 1/2 phosphorylation through PKA, thereby reducing KCa3.1 channel synthesis. • Lyso-Gb3 reduces PI3KC2β-mediated intracellular PI(3)P production. • Lyso-Gb3 reduces both surface and total expression of the KCa3.1 channel. • Increasing intracellular levels of PI(3)P only recovers the reduced surface expression.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

AT13148, a first-in-class multi-AGC kinase inhibitor, potently inhibits gastric cancer cells both in vitro and in vivo

The AGC kinase family is important cell proliferation and survival. Dysregulation of this family contributes to gastric cancer progression. Here, we evaluated the potential activity of AT13148, a first-in-class multi-AGC kinase inhibitor, against gastric cancer cells. Our results showed that AT13148 exerted potent cytotoxic and anti-proliferative activities against a panel human gastric cancer cell lines (HGC-27, AGS, SNU-601, N87 and MKN-28), possibly via inducing cancer cell apoptotic death. Apoptosis inhibition by the Caspase blockers dramatically attenuated AT13148-caused cytotoxicity against gastric cancer cells. Intriguingly, same AT13148 treatment was not cytotoxic/pro-apoptotic to the non-cancerous human gastric epithelial GEC-1 cells. At the signaling level, AT13148 treatment in gastric cancer cells dramatically suppressed activation of multiple AGC kinases, including Akt (at p-Thr-308), p70S6 kinase (p70S6K), glycogen synthase kinase 3β (GSK-3β) and p90 ribosomal S6 kinase (RSK). Our in vivo studies demonstrated that daily oral gavage of AT13148 at well-tolerated doses significantly inhibited HGC27 xenograft tumor growth in nude mice. AGC activity was also dramatically decreased in AT13148-administrated HGC27 tumors. Therefore, targeting AGC kinases by AT13148 demonstrates superior anti-gastric cancer activity both in vitro and in vivo. The preclinical results of this study support the progression of this molecule into future evaluation as a valuable anti-gastric cancer candidate. - Highlights: • AT13148 is cytotoxic and anti-proliferative to human gastric cancer cells. • AT13148 induces gastric cancer cell apoptotic death, inhibited by Caspase inhibitors. • AT13148 inactivates multiple AGC kinases in human gastric cancer cells. • AT13148 oral administration suppresses HGC27 xenograft growth in nude mice. • AT13148 oral administration inhibits multiple AGC kinases in HGC27 xenograft tumors.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

Identification of pyrrolo[3,2-c]pyridin-4-amine compounds as a new class of entry inhibitors against influenza viruses in vitro

Various influenza virus entry inhibitors are being developed as therapeutic antiviral agents in ongoing preparation for emerging influenza viruses, particularly those that may possess drug resistance to the current FDA-approved neuraminidase inhibitors. In this study, small molecules having the pyrrolopyridinamine (PPA), aminothiadiazole (ATD), dihydrofuropyridine carboxamide (HPC), or imidazopyridinamine (IPA) moiety were selected from a target-focused chemical library for their inhibitory activity against influenza A virus by high-throughput screening using the PR8GFP assay. Activity was evaluated by measuring changes the proportion of GFP-expressing cells as a reflection of influenza virus infection. Among them, PPA showed broad-spectrum activity against multiple influenza A viruses and influenza B virus. PPA was found to block the early stages of influenza virus infection using a time-of-addition assay. Using additional phenotypic assays that dissect the virus entry process, it appears that the antiviral activity of PPA against influenza virus can be attributed to interference of the post-fusion process: namely, virus uncoating and nuclear import of viral nucleoprotein complexes. Based on these results, PPA is an attractive chemical moiety that can be used to develop new antiviral drug candidates against influenza viruses. - Highlights: • Four chemical classes are identified from target-focused chemical library by HTS. • PPA inhibits the infection of various influenza A viruses and influenza B virus. • PPA is identified to inhibit the early stages of influenza virus infection. • PPA compound disrupts virus uncoating and nuclear import of viral ribonucleoprotein.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Scavenger receptor class B type 1 regulates neuroblastoma cell proliferation, migration and invasion

Neuroblastoma (NB) is an extra cranial pediatric embryonal tumor most prevalent in children less than 1 year of age. NB accounts for 7% of all pediatric cancers but accounts for 15% of all childhood cancer deaths. Scavenger receptor class B type 1 (SR-B1), a mediator of cellular cholesterol uptake, is overexpressed in and have been linked to the aggressiveness of many cancers. Nevertheless, no studies have so far investigated the relationship between SR-B1 and NB. Elucidation of receptors that promote NB may pave the way for discovery of new therapeutic targets. Here we show that inhibition of SR-B1 reduced cell survival, migration and invasion, and cholesterol content in NB cell lines. Additionally analysis of SR-B1 levels in NB patient biopsies using the R2: Genomics Analysis and Visualization Platform showed that high SR-B1 expression correlated with decreased overall and event-free survival.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Targeted cancer cell ablation in mice by an α-particle-emitting astatine-211-labeled antibody against major histocompatibility complex class I chain-related protein A and B

Highlights: • MICA/B is expressed in several human cancer cells. • We generated an α-particle-emitting {sup 211}At-labelled antibody targeting MICA/B. • {sup 211}At-labelled antibody specifically killed human cancer cells expressing MICA/B. • {sup 211}At-labelled antibody targeting MICA/B showed anti-tumor activity in vivo. Major histocompatibility complex class I chain-related protein A and B (MICA/B) are ligands of the immune receptor, natural-killer group 2 member D. MICA/B expression is often found in several types of cancer but is restricted in normal tissues. Here, we show that an α-particle emitting astatine-211 ({sup 211}At)-labeled antibody targeting MICA/B ({sup 211}At-anti MICA/B Ab) efficiently ablates cancer cells in vitro and in vivo. We generated {sup 211}At-anti MICA/B Ab, an anti-MICA/B antibody conjugated with a highly cytotoxic α-particle emitting radionuclide {sup 211}At. {sup 211}At-anti MICA/B Ab binds to human osteosarcoma SaOS2 and U2OS cells that exhibit high levels of MICA/B expression and efficiently kills those cells in vitro. Biodistribution analysis using xenograft mouse models of HCT116 p53{sup −/−} positive for MICA/B expression, showed increased {sup 211}At in the xenografts for up to 22 h after injection as time proceeded. A single dose of {sup 211}At-anti MICA/B Ab (1 MBq) showed significant reduction in the tumor growth rate of HCT116 p53{sup −/−} xenografts compared to {sup 211}At-labeled mouse IgG (1 MBq) at 21 days after injection. No body weight loss and erythrocytopenia was evident in mice that received {sup 211}At-anti MICA/B. Leukocytopenia and thrombocytopenia were observed within a week after {sup 211}At-anti MICA/B injection, but counts of red blood cells and platelets were recovered to control levels at about 3–4 weeks after injection. Taken together, these data strongly demonstrate that targeted α-particle therapy using {sup 211}At-anti-MICA/B Ab emitting highly cytotoxic α-particles is a potential new therapeutic option for several types of cancer.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2012

The novel benzopyran class of selective cyclooxygenase-2 inhibitors. Part 2: The second clinical candidate having a shorter and favorable human half-life

In this Letter, we provide the structure-activity relationships, optimization of design, testing criteria, and human half-life data for a series of selective COX-2 inhibitors. During the course of our structure-based drug design efforts, we discovered two distinct binding modes within the COX-2 active site for differently substituted members of this class. The challenge of a undesirably long human half-life for the first clinical candidate 1t{sub 1/2} = 360 h was addressed by multiple strategies, leading to the discovery of 29b-(S) (SC-75416) with t{sub 1/2} = 34 h.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2016

Efforts towards the optimization of a bi-aryl class of potent IRAK4 inhibitors

IRAK4 has been identified as potential therapeutic target for inflammatory and autoimmune diseases. Herein we report the identification and initial SAR studies of a new class of pyrazole containing IRAK4 inhibitors designed to expand chemical diversity and improve off target activity of a previously identified series. These compounds maintain potent IRAK4 activity and desirable ligand efficiency. Rat clearance and a variety of off target activities were also examined, resulting in encouraging data with tractable SAR.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2017

Identification and characterization of a class of MALAT1 -like genomic loci

The MALAT1 (Metastasis-Associated Lung Adenocarcinoma Transcript 1) gene encodes a noncoding RNA that is processed into a long nuclear retained transcript ( MALAT1 ) and a small cytoplasmic tRNA-like transcript (mascRNA). Using an RNA sequence- and structure-based covariance model, we identified more than 130 genomic loci in vertebrate genomes containing the MALAT1 3' end triple-helix structure and its immediate downstream tRNA-like structure, including 44 in the green lizard Anolis carolinensis . Structural and computational analyses revealed a co-occurrence of components of the 3' end module. MALAT1 -like genes in Anolis carolinensis are highly expressed in adult testis, thus we named them testis-abundant long noncoding RNAs (tancRNAs). MALAT1 -like loci also produce multiple small RNA species, including PIWI-interacting RNAs (piRNAs), from the antisense strand. The 3' ends of tancRNAs serve as potential targets for the PIWI-piRNA complex. Furthermore, we have identified an evolutionarily conserved class of long noncoding RNAs (lncRNAs) with similar structural constraints, post-transcriptional processing, and subcellular localization and a distinct function in spermatocytes.

59 BASIC BIOLOGICAL SCIENCES↗