Search NASA⌕ Search

SEARCH · Search NASA

Results for “biological processing”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 685 records · Page 38

Evaluation of the maximum cross-correlation method of estimating sea surface velocities from sequential satellite images

The maximum cross correlation (MCC) method of Leese et al. (1971) for estimating sea surface velocities from sequences of satellite images is evaluated by comparing the MCC fields obtained from sequences of AVHRR and CZCS with in situ data and velocity fields calculated with a high-resolution quasi-geostrophic model. The rms differences and vector correlations between the velocity field produced by the MCC method and the model's field are presented. It is shown that much of the difference between the MCC fields and either the in situ data or the model velocity fields can be accounted for by considering physical and biological processes not included in the MCC method. The conditions under which the method is likely to be most successful are discussed.

Tokmakian, Robin↗

Biogeochemical modeling at mass extinction boundaries

The causes of major mass extinctions is a subject of considerable interest to those concerned with the history and evolution of life on earth. The primary objectives of the proposed plan of research are: (1) to develop quantitative time-dependent biogeochemical cycle models, coupled with an ocean atmosphere in order to improve the understanding of global scale physical, chemical, and biological processes that control the distribution of elements important for life at times of mass extinctions; and (2) to develop a comprehensive data base of the best available geochemical, isotopic, and other relevant geologic data from sections across mass extinction boundaries. These data will be used to constrain and test the biogeochemical model. These modeling experiments should prove useful in: (1) determining the possible cause(s) of the environmental changes seen at bio-event boundaries; (2) identifying and quantifying little-known feedbacks among the oceans, atmosphere, and biosphere; and (3) providing additional insights into the possible responses of the earth system to perturbations of various timescales. One of the best known mass extinction events marks the Cretaceous/Tertiary (K/T) boundary (66 Myr ago). Data from the K/T boundary are used here to constrain a newly developed time-dependent biogeochemical cycle model that is designed to study transient behavior of the earth system. Model results predict significant fluctuations in ocean alkalinity, atmospheric CO2, and global temperatures caused by extinction of calcareous plankton and reduction in the sedimentation rates of pelagic carbonates and organic carbon. Oxygen-isotome and other paleoclimatic data from K/T time provide some evidence that such climatic fluctuations may have occurred, but stabilizing feedbacks may have acted to reduce the ocean alkalinity and carbon dioxide fluctuations.

Rampino, M. R.↗

Laser Remote Sensing of Pollution on Water Surfaces

One of the most important problems of modern environmental science is the detection and identification of various impurities in the ocean. Sources of impurities in sea water are diverse. The most common of them are accidental transport, agricultural, and oil industry spills. Once the ecological balance is disturbed, biological processes in sea water become affected, resulting in changes in chlorophyll concentrations, water turbidity, and temperature. During the last few years, we have created new types of lidars and arranged nearly ten aircraft and shipboard expeditions. Some aircraft expeditions dealt with terrestrial investigations. Others were devoted to oceanological research, the results of which are discussed here. Emphasis is on the detection of phytoplankton chlorophyll and hydrocarbon in sea water.

Bunkin, A. F.↗

Toward an understanding of global change

In the international scientific community, the International Council of Scientific Unions has organized the International Geosphere Biosphere Program (IGBP) to address the problems of global change. The objective of the IGBP is to describe and understand the interactive physical, chemical, and biological processes that regulate the total earth system, the unique environment that it provides for life, the changes that are occurring in this system, and the manner in which they are influenced by human activities. The IGBP is currently in its preparatory phase, during which the program's goals and research components are slowly evolving and coming into focus. In this report, a limited number of high-priority research initiatives are recommended for early implementation as part of the U.S. contribution to the preparatory phase of the IGBP. The recommendations are based on the committee's analysis of the most critical gaps, not being addressed by existing programs, in the scientific knowledge needed to understand the changes that are occurring in the earth system on time scales of decades to centuries. These initiatives will build upon the capabilities of the U.S. program in global change.

Source record↗

OSSA Space Station Freedom science utilization plans

Long duration exposure to an essentially zero-gravity environment is a phenomenon exclusive to the Space Station Freedom that cannot be duplicated on Earth. The Freedom Station will offer periods of time on orbit extending to weeks and months rather than hours or days, allowing for in-depth space based research and analysis to a degree never before achieved. OSSA remains committed to exploiting the unique capabilities provided by the Space Station as well as other space-based facilities to study the nature of physical, chemical, and biological processes in a low-gravity environment and to apply these studies to advance science and applications in such fields as biomedical research, plant and animal physiology, exobiology, biotechnology, materials science, fluid physics, and combustion science. The OSSA focus is on progressive science investigations, many requiring hands-on scientist involvement using sophisticated experiment hardware. OSSA science utilization planning for the Freedom Station is firmly established. For this presentation, this planning is discussed in three general areas: OSSA goals and overall approach, the current and on-going program, and plans for space station utilization. In the first area, OSSA addresses its overall approach to space science research, its commitment to transition to Space Station Freedom, and its top-level strategy for the utilization of Freedom. The current and on-going program is next discussed, focusing on the various Spacelab series of missions which are providing the stepping-stones to Space Station Freedom. Selected science results from SLS-1 and USML-1 are cited which underline the value of properly outfitted laboratories in space in which crew-intensive experiment interactions are possible. The presentation is concluded with a discussion of top-level goals and strategies for utilizing the Freedom Station by OSSA's Life Sciences Division and its Microgravity Science and Applications Division.

Cressy, Philip J.↗

Human life support during interplanetary travel and domicile. VI - Generic modular flow schematic for hybrid physical/chemical-biological life support systems

An extension is proposed for the NASA Space Exploration Initiative's Generic Modular Flow Schematics for physical/chemical life support systems which involves the addition of biological processes. The new system architecture includes plant, microbial, and animal habitat, as well as the human habitat subsystem. Major Feedstock Production and Food Preparation and Packaging components have also been incorporated. Inedible plant, aquaculture, microbial, and animal solids are processed for recycling.

Ganapathi, Gani B.↗

Aquatic Plant/microbial Filters for Treating Septic Tank Effluent

The use of natural biological processes for treating many types of wastewater have been developed by NASA at the John C. Stennis Space Center, NSTL, Mississippi, during the past 15 years. The simplest form of this technology involves the use of aquatic plant/marsh filters for treatment of septic tank effluent. Septic tank effluent from single home units can be treated to advanced secondary levels and beyond by using a 37.2 sq m (400 sq ft) surface area washed gravel filter. This filter is generally 0.3 m (1 ft) deep with a surface cover of approximately 0.15 m (6 in.) of gravel. The plants in this filter are usually aesthetic or ornamental such as calla lily (Zantedeschia aethiopica), canna lily (Canna flaccida), elephant ear (Colocasia esculenta), and water iris (Iris pseudacorus).

Wolverton, B. C.↗

Carbon and nitrogen biogeochemistry in the ocean: A study using stable isotope natural abundance

Determining the biogeochemical pathways traveled by carbon and nitrogen in the ocean is fundamental to the understanding of how the ocean participates in the cycling of these elements within the biosphere. Because biological production, metabolism, and respiration can significantly alter the natural abundance of C-13 and N-15, these abundances can provide important information about the nature of these biological processes and their variability in the marine environment. The research initially seeks to characterize the spatial and temporal patterns of stable isotope abundances in organic matter, and to relate these abundances to C and N biogeochemical processes within selected areas of the northeastern Pacific Ocean.

Rau, G. H.↗

SeaWiFS technical report series. Volume 17: Ocean color in the 21st century. A strategy for a 20-year time series

Beginning with the upcoming launch of the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), there should be almost continuous measurements of ocean color for nearly 20 years if all of the presently planned national and international missions are implemented. This data set will present a unique opportunity to understand the coupling of physical and biological processes in the world ocean. The presence of multiple ocean color sensors will allow the eventual development of an ocean color observing system that is both cost effective and scientifically based. This report discusses the issues involved and makes recommendations intended to ensure the maximum scientific return from this unique set of planned ocean color missions. An executive summary is included with this document which briefly discusses the primary issues and suggested actions to be considered.

Abbott, Mark R.↗

DataHub sponsored analysis

The primary productivity of phytoplankton in the ocean is largely responsible for the assimilation of carbon into the oceanic environment, and thus in part the removal of carbon from the atmosphere. Because the ocean is thought to be a primary sink for atmospheric carbon, the basin wide and global distribution of oceanic primary productivity is of central importance in the global budget of carbon. To understand the global productivity of the oceans, the interactions between the physical and biological structures must be known. To address the broader context of the primary productivity of the sea, the physical and biological processes and their variability, including changes in water mass, incident irradiance, nutrients, and consequent formation of blooms of different species of marine phytoplankton and bacteria must be studied. In this investigation, we will use time series of the pigment distributions, taken from the Coastal Zone Color Scanner (CZCS), and of the sea-surface temperature, taken from the NOAA Advanced Very High Resolution Radiometer (AVHRR). These time series will be examined to determine the spatial and temporal statistics of productivity, including the interannual variations that occur in productivity caused by variations in the physical environment. For this task we have chosen to use monthly composite global maps created from the satellite imagery.

Tran, An Van↗

Color banding on Georges Bank as viewed by coastal zone color scanner

Observations of Georges Bank by coastal zone color scanner (CZCS) show bandlike patterns that appear to be related to the large sand dunes and ridges which dominate the bottom topography there. Ship measurements of temperature and chlorophyll on Georges Bank in July 1979 also reflect the influence of the underwater dune fields. The cause of the banding in the CZCS data is unknown but is speculated to be the creation of alternating zones of divergence and convergence by tidal currents as the water flows over the underwater dune-trough configuration. The banding observed by CZCS appears to be seasonal, following the sequence of primary production in the Gulf of Maine, and is believed to be important to biological processes as a site of new production and/or as an effective transport mechanism. Any future models that attempt to interrelate tidal mixing and primary production must consider bottom topography and secondary flows.

Yentsch, C. S.↗

Approaches to resource recovery in controlled ecological life support systems

Recovery of resources from waste streams in a space habitat is essential to minimize the resupply burden and achieve self sufficiency. The ultimate goal of a Controlled Ecological Life Support System (CELSS) is to achieve the greatest practical level of mass recycle and provide self sufficiency and safety for humans. Several mission scenarios leading to the ultimate application could employ CELSS component technologies or subsystems with initial emphasis on recycle of the largest mass components of the waste stream. Candidate physical/chemical and biological processes for resource recovery from liquid and solid waste streams are discussed and the current fundamental recovery potentials are estimated.

Bubenheim, D. L.↗

Effects of Caudal Elevation on Testicular Function in Rats: Separation of Effects on Spermatogenesis and Steroidogenesis

A variety of biologic processes are perturbed when exposed to microgravity (space flight) for more than 7 days, including testicular function. Suspension of rats in a special harness (caudal elevation) to induce thoracic pooling of blood fluids and remove the support function of the hind limbs is used to mimic, on earth, the effects of microgravity encountered during space flight. Typically, this induces cryptorchidism in male rats. Three experiments were conducted to differentiate the effects of caudal elevation (30 deg angle) and anatomic location of testes on spermatogenesis and steroidogenesis. Rats were subjected to caudal elevation for 7 days using either a tail harness or a whole-body harness. Testes of rats fell into the abdominal cavity when a tail harness was used, but ligation of the iguinal canal prevented this repositioning. For rats with abdominal testes, testicular weight was reduced (P less than 0.05) and histology of testes was abnormal; the number of spermatids per gram parenchyma was lower (P less than 0.05) in tail-suspended rats compared with control rats.

Deaver, D. R.↗

A Simulation of Biological Prosesses in the Equatorial Pacific Warm Pool at 165 deg E

A nine-year simulation (1984-1992) of biological processes in the equatorial Pacific Warm Pool is presented. A modified version of the 4-component (phytoplankton, zooplankton, nitrate and ammonium) ecosystem model by McClain et al. (1996) is used. Modifications include use of a spectral model for computation of PAR and inclusion of fecal pellet remineralization and ammonium nitrification. The physical parameters (horizontal and vertical velocities and temperature) required by the ecosystem model were derived from an improved version of the Gent and Cane (1990) ocean general circulation model (Murtugudde and Busalacchi, 1997). Surface downwelling spectral irradiance was estimated using the clear-sky models of Frouin et al. (1989) and Gregg and Carder (1990) and cloud cover information from the International Satellite Cloud Climatology Project (ISCCP). The simulations indicate considerable variability on interannual time scales in all four ecosystem components. In particular, surface chlorophyll concentrations varied by an order of magnitude with maximum values exceeding 0.30 mg/cu m in 1988, 1989, and 1990, and pronounced minimums during 1987 and 1992. The deep chlorophyll maximum ranged between 75 and 125 meters with values occasionally exceeding 0.40 mg/cu m. With the exception of the last half of 1988, surface nitrate was always near depletion. Ammonium exhibited a subsurface maximum just below the DCM with concentrations as high as 0.5 mg-atN/cu m . Total integrated annual primary production varied between 40 and 250 gC/sq m/yr with an annual average of 140 gC/sq m/yr. Finally, the model is used to estimate the mean irradiance at the base of the mixed layer, i.e., the penetration irradiance, which was 18 Watts/sq m over the nine year period. The average mixed layer depth was 42 m.

McClain, Charles R.↗

Methane Production and Transport within the Marsh Biome of Biosphere 2

In recent decades, the concentration of methane in the earth's atmosphere increased 1-2% annually. It's rate of increases, combined with methane's effectiveness as a greenhouse gas, has led to an intensive research effort to determine the sources and sinks of the gas in the environment. Biosphere 2 offers a unique opportunity to contribute to the effort because it lacks a major photochemical sink present in the Earth's atmosphere. Researchers can therefore concentrate on biological processes involved in methane cycles. Wetlands are a large source of atmospheric methane, due to anoxic conditions in the sediments and the abundance of organic materials. In order to determine if these conditions in Biosphere 2 also promote methane production, this study looked for the fluxes of methane and methods of transport of the gas from from the water and sediments to the atmosphere in the Marsh Biome. Fluxes of methane from the sediments and waters were measured using static chambers, peepers, and leaf bags. Fluxes and vertical profiles of methane in the sediments show that substantial amounts of methane are being produced in the marsh and are being transported into the Biosphere 2 environment.

Molnar, Jennifer↗

Carbon-Isotopic Dynamics of Streams, Taylor Valley, Antarctica: Biological Effects

We have investigated the role of biological processes in the C-isotopic dynamics of the aquatic ecosystems in Taylor Valley, Antarctica. This cold desert ecosystem is characterized by the complete lack of vascular plants, and the presence of algal mats in ephemeral streams and perennially ice covered lakes. Streams having abundant algal mats and mosses have very low sigma CO2 concentrations, as well as the most depleted delta C-13 values (-4%). Previous work has shown that algal mats in these streams have delta C-13 values averaging -7.01%. These values are similar to those observed in the algal mats in shallow areas of the lakes in Taylor Valley, where CO2 is thought to be colimiting to growth. These low Sigma CO2 concentrations, and delta C(13) signatures heavier than the algal mats, suggest that CO2 may be colimiting in the streams, as well. Streams with little algal growth, especially the longer ones in Fryxell Basin, have higher Sigma CO2 concentrations and much more enriched isotopic signatures (as high as +8%). In these streams, the dissolution of isotopically enriched, cryogenic CaCO3 is probably the major source of dissolved carbonate. The delta C(13) geochemistry of Antarctic streams is radically different from the geochemistry of more temperate streams, as it is not affected by terrestrially produced, isotopically depleted Sigma CO2. These results have important implications for the understanding of "biogenic" carbonate that might have been produced from aquatic ecosystems in the past on Mars.

Neumann, K.↗

Structure of Pseudoknot PK26 Shows 3D Domain Swapping in an RNA

3D domain swapping provides a facile pathway for the evolution of oligomeric proteins and allosteric mechanisms and a means for using monomer-oligomer equilibria to regulate biological activity. The term "3D domain swapping" describes the exchange of identical domains between two protein monomers to create an oligomer. 3D domain swapping has, so far, only been recognized in proteins. In this study, the structure of the pseudoknot PK26 is reported and it is a clear example of 3D domain swapping in RNA. PK26 was chosen for study because RNA pseudoknots are required structures in several biological processes and they arise frequently in in vitro selection experiments directed against protein targets. PK26 specifically inhibits HIV-1 reverse transcriptase with nanomolar affinity. We have now determined the 3.1 A resolution crystal structure of PK26 and find that it forms a 3D domain swapped dimer. PK26 shows extensive base pairing between and within strands. Formation of the dimer requires the linker region between the pseudoknot folds to adopt a unique conformation that allows a base within a helical stem to skip one base in the stacking register. Rearrangement of the linker would permit a monomeric pseudoknot to form. This structure shows how RNA can use 3D domain swapping to build large scale oligomers like the putative hexamer in the packaging RNA of bacteriophage Phi29.

Lietzke, Susan E↗

Stable Isotope Laser Spectrometer for Exploration of Mars

On Earth, measurements of the ratios of stable carbon isotopes have providet much information about geological and biological processes. For example, fractionation of carbon occur in biotic processes and the retention of a distinctive 2-4% contrast in C-13/C-12 between organic carbon and carbonates in rocks as old as 3.8 billion years constitutes some of the firmest evidence for the antiquity of life on the Earth. We have developed a prototype tunable diode laser spectrometer which demonstrates the feasibility of making accurate in situ isotopic ratio measurements on Mars. This miniaturized instrument, with an optical path length of 10 cm should be capable of making accurate C-13/C-12 and N-15/N-14 measurements. Gas samples for measurement are to be produced by pyrolysis using soil samples as small as 50 mg. Measurements of C-13/C-12, O-18/O-16 and N-15/N-14 have been made to a precision of better than 0.1%, and various other isotopes are feasible. This laser technique, which relies on the extremely narrow emission linewidth of tunable diode lasers (less than 0.001/ cm),has favorable features in comparison to mass spectrometry, the standard method of accurate isotopic ratio measurement. The miniature instrument could be ready to deploy c 2003 or other Mars lander missions.

Sauke, Todd B.↗