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The HDF-EOS 2 and HDF-EOS 5 Compatibility Library contains C-language functions that provide uniform access to HDF-EOS 2 and HDF-EOS 5 files through one set of application programming interface (API) calls. ("HDFEOS 2" and "HDF-EOS 5" are defined in the immediately preceding article.) Without this library, differences between the APIs of HDF-EOS 2 and HDF-EOS 5 would necessitate writing of different programs to cover HDF-EOS 2 and HDF-EOS 5. The API associated with this library is denoted "he25." For nearly every HDF-EOS 5 API call, there is a corresponding he25 API call. If a file in question is in the HDF-EOS 5 format, the code reverts to the corresponding HDF-EOS 5 call; if the file is in the HDF-EOS 2 format, the code translates the arguments to HDF-EOS 2 equivalents (if necessary), calls the HDFEOS 2 call, and retranslates the results back to HDF-EOS 5 (if necessary).
This paper describes the AIRS Science Team Version 5 retrieval algorithm in terms of its three most significant improvements over the methodology used in the AIRS Science Team Version 4 retrieval algorithm. Improved physics in Version 5 allows for use of AIRS clear column radiances in the entire 4.3 micron CO2 absorption band in the retrieval of temperature profiles T(p) during both day and night. Tropospheric sounding 15 micron CO2 observations are now used primarily in the generation of clear column radiances .R(sub i) for all channels. This new approach allows for the generation of more accurate values of .R(sub i) and T(p) under most cloud conditions. Secondly, Version 5 contains a new methodology to provide accurate case-by-case error estimates for retrieved geophysical parameters and for channel-by-channel clear column radiances. Thresholds of these error estimates are used in a new approach for Quality Control. Finally, Version 5 also contains for the first time an approach to provide AIRS soundings in partially cloudy conditions that does not require use of any microwave data. This new AIRS Only sounding methodology, referred to as AIRS Version 5 AO, was developed as a backup to AIRS Version 5 should the AMSU-A instrument fail. Results are shown comparing the relative performance of the AIRS Version 4, Version 5, and Version 5 AO for the single day, January 25, 2003. The Goddard DISC is now generating and distributing products derived using the AIRS Science Team Version 5 retrieval algorithm. This paper also described the Quality Control flags contained in the DISC AIRS/AMSU retrieval products and their intended use for scientific research purposes.
To evaluate the impact of suppressing inositol 1,4,5-trisphosphate (InsP(3)) in plants, tobacco (Nicotiana tabacum) cells were transformed with the human type I inositol polyphosphate 5-phosphatase (InsP 5-ptase), an enzyme which specifically hydrolyzes InsP(3). The transgenic cell lines showed a 12- to 25-fold increase in InsP 5-ptase activity in vitro and a 60% to 80% reduction in basal InsP(3) compared with wild-type cells. Stimulation with Mas-7, a synthetic analog of the wasp venom peptide mastoparan, resulted in an approximately 2-fold increase in InsP(3) in both wild-type and transgenic cells. However, even with stimulation, InsP(3) levels in the transgenic cells did not reach wild-type basal values, suggesting that InsP(3) signaling is compromised. Analysis of whole-cell lipids indicated that phosphatidylinositol 4,5-bisphosphate (PtdInsP(2)), the lipid precursor of InsP(3), was greatly reduced in the transgenic cells. In vitro assays of enzymes involved in PtdInsP(2) metabolism showed that the activity of the PtdInsP(2)-hydrolyzing enzyme phospholipase C was not significantly altered in the transgenic cells. In contrast, the activity of the plasma membrane PtdInsP 5 kinase was increased by approximately 3-fold in the transgenic cells. In vivo labeling studies revealed a greater incorporation of (32)P into PtdInsP(2) in the transgenic cells compared with the wild type, indicating that the rate of PtdInsP(2) synthesis was increased. These studies show that the constitutive expression of the human type I InsP 5-ptase in tobacco cells leads to an up-regulation of the phosphoinositide pathway and highlight the importance of PtdInsP(2) synthesis as a regulatory step in this system.
The aim of this study was to determine whether 5-hydroxytryptamine (5-HT)(3) receptors on cardiopulmonary afferents mediating the Bezold-Jarisch reflex (BJR) desensitize upon repeated exposure to selective agonists. BJR-mediated falls in heart rate, diastolic arterial blood pressure and cardiac output elicited by the 5-HT(3)-receptor agonists, phenylbiguanide (100 microg/kg, i.v.) or 2-methyl-5-HT (100 microg/kg, i.v.), progressively diminished upon repeated injection in conscious rats. The BJR responses elicited by 5-HT (40 microg/kg, i.v.) were markedly reduced in rats which had received the above injections of phenylbiguanide or 2-methyl-5-HT whereas the BJR responses elicited by L-S-nitrosocysteine (10 micromol/kg, i.v.) were similar before and after the injections of the 5-HT(3) receptor agonists. These findings suggest that tachyphylaxis to 5-HT(3) receptor agonists may be due to the desensitization of 5-HT(3) receptors on cardiopulmonary afferents rather than the impairment of the central or peripheral processing of the BJR.
Methyladenine and adenine N-phosphoryl derivatives of adenosine 5'-monophosphate (5'-AMP) and uridine 5'-monophosphate (5'-UMP) are synthesized, and their structures are elucidated. The oligomerization reactions of the adenine derivatives of 5'-phosphoramidates of adenosine on montmorillonite are investigated. 1-Methyladenine and 3-methyladenine derivatives on montmorillonite yielded oligoadenylates as long as undecamer, and the 2-methyladenine and adenine derivatives on montmorillonite yielded oligomers up to hexamers and pentamers, respectively. The 1-methyladenine derivative yielded linear, cyclic, and A5'ppA-derived oligonucleotides with a regioselectivity for the 3',5'-phosphodiester linkages averaging 84%. The effect of pKa and amine structure of phosphate-activating groups on the montmorillonite-catalyzed oligomerization of the 5'-phosphoramidate of adenosine are discussed. The binding and reaction of methyladenine and adenine N-phosphoryl derivatives of adenosine are described.
The rate constants for the condensation reaction of the 5'-phosphorimidazolide of adenosine (ImpA) to form dinucleotides and oligonucleotides have been measured in the presence of Na(+)-volclay (a Na(+)-montmorillonite) in pH 8 aqueous solution at 25 degrees C. The rates of the reaction of ImpA with an excess of adenosine 5'-monophosphoramidate (NH2pA), P1,P2-diadenosine 5',5'-pyrophosphate (A5'ppA), or adenosine 5'-monophosphate (5'-AMP or pA) in the presence of the montmorillonite to form NH2pA3'pA, A5'ppA3'pA, and pA3'pA, respectively, were measured. Only 3',5'-linked products were observed. The magnitude of the rate constants decrease in the order NH2pA3'pA > A5'-ppA3'pA > pA3'pA. The binding of ImpA to montmorillonite was measured, and the adsorption isotherm was determined. The binding of ImpA to montmorillonite and the formation of higher oligonucleotides is not observed in the absence of salts. Mg2+ enhances binding and oligonucleotide formation more than Ca2+ and Na+. The rate constants for the oligonucleotide formation were determined from the reaction products formed from 10 to 40 mM ImpA in the presence of Na(+)-montmorillonite using the computer program SIMFIT. The magnitudes of the rate constants for the formation of oligonucleotides increased in the order 2-mer < 3-mer < 4-mer ... 7-mer. The rate constants for dinucleotide and trinucleotide formation are more than 1000 times larger than those measured in the absence of montmorillonite. The rate constants for the formation of dinucleotide, trinucleotide, and tetranucleotide are 41,2.6, and 3.7 times larger than those for the formation of oligo(G)s with a poly(C) template. The hydrolysis of ImpA was accelerated 35 times in the presence of the montmorillonite. The catalytic ability of montmorillonite to form dinucleotides and oligonucleotides is quantitatively evaluated and possible pathways for oligo(A) formation are proposed.
Information related to land surface phenology is important for a variety of applications. For example, phenology is widely used as a diagnostic of ecosystem response to global change. In addition, phenology influences seasonal scale fluxes of water, energy, and carbon between the land surface and atmosphere. Increasingly, the importance of phenology for studies of habitat and biodiversity is also being recognized. While many data sets related to plant phenology have been collected at specific sites or in networks focused on individual plants or plant species, remote sensing provides the only way to observe and monitor phenology over large scales and at regular intervals. The MODIS Global Land Cover Dynamics Product was developed to support investigations that require regional to global scale information related to spatiotemporal dynamics in land surface phenology. Here we describe the Collection 5 version of this product, which represents a substantial refinement relative to the Collection 4 product. This new version provides information related to land surface phenology at higher spatial resolution than Collection 4 (500-m vs. 1-km), and is based on 8-day instead of 16-day input data. The paper presents a brief overview of the algorithm, followed by an assessment of the product. To this end, we present (1) a comparison of results from Collection 5 versus Collection 4 for selected MODIS tiles that span a range of climate and ecological conditions, (2) a characterization of interannual variation in Collections 4 and 5 data for North America from 2001 to 2006, and (3) a comparison of Collection 5 results against ground observations for two forest sites in the northeastern United States. Results show that the Collection 5 product is qualitatively similar to Collection 4. However, Collection 5 has fewer missing values outside of regions with persistent cloud cover and atmospheric aerosols. Interannual variability in Collection 5 is consistent with expected ranges of variance suggesting that the algorithm is reliable and robust, except in the tropics where some systematic differences are observed. Finally, comparisons with ground data suggest that the algorithm is performing well, but that end of season metrics associated with vegetation senescence and dormancy have higher uncertainties than start of season metrics.
The internodal maize pulvinus responds to gravistimulation with differential cell elongation on the lower side. As the site of both graviperception and response, the pulvinus is an ideal system to study how organisms sense changes in orientation. We observed a transient 5-fold increase in inositol 1,4,5-trisphosphate (IP3) within 10 s of gravistimulation in the lower half of the pulvinus, indicating that the positional change was sensed immediately. Over the first 30 min, rapid IP3 fluctuations were observed between the upper and lower halves. Maize plants require a presentation time of between 2 and 4 h before the cells on the lower side of the pulvinus are committed to elongation. After 2 h of gravistimulation, the lower half consistently had higher IP3, and IP3 levels on the lower side continued to increase up to approximately 5-fold over basal levels before visible growth. As bending became visible after 8-10 h, IP3 levels returned to basal values. Additionally, phosphatidylinositol 4-phosphate 5-kinase activity in the lower pulvinus half increased transiently within 10 min of gravistimulation, suggesting that the increased IP3 production was accompanied by an up-regulation of phosphatidylinositol 4, 5-bisphosphate biosynthesis. Neither IP3 levels nor phosphatidylinositol 4-phosphate 5-kinase activity changed in pulvini halves from vertical control plants. Our data indicate the involvement of IP3 and inositol phospholipids in both short- and long-term responses to gravistimulation. As a diffusible second messenger, IP3 provides a mechanism to transmit and amplify the signal from the perceiving to the responding cells in the pulvinus, coordinating a synchronized growth response.
The purpose of the present study was to examine the effect of altering the concentration of 5-hydroxytryptamine (5-HT) on beta-endorphin (beta-Ep) content in the hypothalamus, thalamus, and periaqueductal gray (PAG)-rostral pons regions of the rat brain. The selective 5-HT reuptake inhibitor, fluoxetine (10 mg/kg), significantly lowered beta-Ep content in the hypothalamus and the PAG. Parachlorophenylalanine, which inhibits 5-HT synthesis, significantly elevated beta-Ep in all brain parts studied. Intracisternal injections of the neurotoxin 5-prime, 7-prime-dihydroxytryptamine with desmethylimipramine pretreatment significantly increased beta-Ep content in the hypothalamus and the PAG. In adrenalectomized rats, fluoxetine significantly decreased beta-Ep levels in the hypothalamus and increased the levels in the PAG. The results indicate that 5-HT may modulate the levels of brain beta-Ep.
The effect of 5-hydroxytryptamine (5-HT) alteration on brain dopamine (DA), norepinephrine (NE), beta-endorphin (beta-E), and immunoreactive insulin was studied in Sprague-Dawley diabetic and control rats. Diabetes was induced using alloxan (45 mg/kg), 15 days prior to sacrificing. Both control and diabetic animals were treated with either p-chlorophenylalanine (PCPA, 300 mg/kg) three days prior to sacrificing or fluoxetine (10 mg/kg) twice daily for three days. PCPA treatment significantly decreased brain content of 5-HT and 5-hydroxyindolel acetic acid, while it caused significant increase and decrease in brain beta-E and insulin levels, respectively, in both normal and diabetic rat. Meanwhile, the administration of fluoxetine resulted in significant increase in brain content of 5-HT, DA, NE and insulin but significant decline of beta-E in diabetic and saline control rats. The results of this experiment indicate that 5-HT may be regulating both beta-E and insulin regardless of the availability of pancreatic insulin.
In this case of the 5:2 commensurability with the motion of Jupiter, an asteroid can reach the orbits of Mars, Earth, and Venus when eccentricity e is greater than 0.41, 0.65, and 0.74, respectively. For individual fictitious asteroids, Ipatov and Yoshikawa obtained a growth in e from 0.15 to 074-0.76. Rates of changes in orbital orientations are different for Mars, Earth, Venus, and the asteroid. Therefore, for corresponding values of e, the asteroid could encounter these planets and leave the gap at those encounters. In order to investigate this hypothesis of the 5:2 Kirkwood gap formation, Ipatov studied the regions of initial data for which the eccentricities of asteroids located near the 5:2 commensurability exceeded 0.41 during evolution. The orbit evolution for 500 fictitious asteroids was investigated by numerical integration of the complete (unaveraged) equations of motion for the three-body problem (Sun-Jupiter-asteroid). The equations of motion were integrated in the time intervals T is greater than or equal to 5(10)(exp 3)t(sub J) (t(sub J) is the heliocentric orbital period of Jupiter) in the planar model, T is greater than or equal to 10(exp 4)t(sub J) at initial inclination 5 deg is less than or equal to i(sub 0) is less than or equal to 20 deg and T = 10(exp 5)t(sub J) at i(sub 0) = 40 deg. The larger interval T was taken at i(sub 0) = 40 deg because in this case for the majority of runs maximum values of e and i were reached in the time delta(t) is greater than 2(10)(exp 4)t(sub J).
We have analyzed the X-ray spectral and fast timing behavior of the Z-source GX 5-1 using X-ray color-color diagrams (CDs), hardness-intensity diagrams (HIDs) and power spectra. We used all EXOSAT ME data on GX 5-1, a total of seven observations during 1983-1985. We detect, for the first time in GX 5-1, secular motion of the well-known 'Z' pattern through the CDs and HIDs. This behavior resembles Cyg X-2, but in GX 5-1 has a smaller amplitude. We find that the power spectra do not change when the 'Z' moves, and are only dependent on the position inside the 'Z'. We also report, for the first time in GX 5-1, indications of flaring-branch (FB) like behavior, both during one of our EXOSAT observations, and during observations done with Ginga. As the secular changes of the position of the 'Z' pattern in the CD and HID are relatively small we investigated in detail the systematic changes in the EXOSAT ME detectors using the only bright and steady X-ray 'standard star', the Crab Nebula. Finally, we determined an intrinsic CD of GX 5-1 (i.e. a soft photon flux-ratio versus hard photon flux-ratio diagram) in a model independent way, by applying a first order correction for the detector efficiency. It is shown, using data of the Crab Nebula, that this method works reasonably well for the determination of intrinsic colors.
We present the UDF05 project, a HST Large Program of deep ACS (F606W, F775W, F850LP, and NICMOS (Fll0W, Fl60W) imaging of three fields, two of which coincide with the NICP1-4 NICMOS parallel observations of the Hubble Ultra Deep Field (HUDF). In this first paper we use the ACS data for the NICP12 field, as well as the original HUDF ACS data, to measure the UV Luminosity Function (LF) of z approximately 5 Lyman Break Galaxies (LBGs) down to very faint levels. Specifically, based on a V - i, i - z selection criterion, we identify a sample of 101 and 133 candidate z approximately 5 galaxies down to z(sub 850) = 28.5 and 29.25 magnitudes in the NICP12 field and in the HUDF, respectively. Using an extensive set of Monte Carlo simulations we derive corrections for observational biases and selection effects, and construct the rest-frame 1400 Angstroms LBG LF over the range M(sub 1400) = [-22.2, -17.1], i.e. down to approximately 0.04 L(sub *) at z = 5. We show that: (i) Different assumptions for the SED distribution of the LBG population, dust properties and intergalactic absorption result in a 25% variation in the number density of LBGs at z = 5 (ii) Under consistent assumptions for dust properties and intergalactic absorption, the HUDF is about 30% under-dense in z = 5 LBGs relative to the NICP12 field, a variation which is well explained by cosmic variance; (iii) The faint-end slope of the LF is independent of the specific assumptions for the input physical parameters, and has a value of alpha approximately -1.6, similar to the faint-end slope of the LF that has been measured for LBGs at z = 3 and z = 6. Our study therefore supports no variation in the faint-end of the LBG LF over the whole redshift range z = 3 to z = 6. The comparison with theoretical predictions suggests that (a,) the majority of the stars in the z = 5 LBG population are produced with a Top-Heavy IMF in merger-driven starbursts, and that (b) possibly, either the fraction of stellar mass produced in starburst, or the fraction of high mass stars in the bursts is increased towards the bright end of the LF.
The Aquarius end-of-mission (Version 5) salinity data set was released in December 2017. This article gives a comprehensive overview of the main steps of the Level 2 salinity retrieval algorithm. In particular, we will discuss the corrections for wind induced surface roughness, atmospheric oxygen absorption, reflected galactic radiation and side-lobe intrusion from land surfaces. Most of these corrections have undergone major updates from previous versions, which has helped mitigating temporal and zonal biases. Our article also discusses the ocean target calibration for Aquarius Version 5. We show how formal error estimates for the Aquarius retrievals can be obtained by perturbing the input to the algorithm. The performance of the Aquarius Version 5 salinity retrievals is evaluated against salinity measurements from the ARGO network and the HYCOM model. When stratified as function of sea surface temperature or sea surface wind speed, the difference between Aquarius Version 5 and ARGO is within +/-0.1 psu. The estimated global RMS uncertainty for monthly 100 km averages is 0.128 psu for the Aquarius Version 5 retrievals. Finally, we show how the Aquarius Version 5 salinity retrieval algorithm is adapted to retrieve salinity from the Soil-Moisture Active Passion (SMAP) mission.
The Aquarius end-of-mission (Version 5) salinity data set was released in December 2017. This article gives a comprehensive overview of the main steps of the Level 2 salinity retrieval algorithm. In particular, we will discuss the corrections for wind induced surface roughness, atmospheric oxygen absorption, reflected galactic radiation and side-lobe intrusion from land surfaces. Most of these corrections have undergone major updates from previous versions, which has helped mitigating temporal and zonal biases. Our article also discusses the ocean target calibration for Aquarius Version 5. We show how formal error estimates for the Aquarius retrievals can be obtained by perturbing the input to the algorithm. The performance of the Aquarius Version 5 salinity retrievals is evaluated against salinity measurements from the ARGO network and the HYCOM model. When stratified as function of sea surface temperature or sea surface wind speed, the difference between Aquarius Version 5 and ARGO is within +-0.1 psu. The estimated global RMS uncertainty for monthly 100 km averages is 0.128 psu for the Aquarius Version 5 retrievals. Finally, we show how the Aquarius Version 5 salinity retrieval algorithm is adapted to retrieve salinity from the Soil-Moisture Active Passion (SMAP) mission.
L1551 IRS 5 has been observed at 15 GHz, 5 GHz, and 1.5 GHz with the VLA, and the findings are discussed. At 15 GHz, the central core is well resolved into two pointlike sources surrounded by weaker extended emission. The northern, brighter source is coincident with the peak at 5 GHz. The jet seen at 5 GHz is barely detected at 15 GHz. There is clearcut evidence for a much flatter spectral index in the extended (jet) structure than in either of the two point sources. The observed length-to-width ratio in the jet is greater than ten. It is suggested that L1551 IRS 5 is a binary system whose orbital plane coincides with the CS molecular toroid. A model of the jet is summarized in which the jet contains small clumps which dominate the 15 GHz emission.
The interaction of 5-prime-AMP with montmorillonite saturated with various ratios of two metals found ubiquitously on the surface of earth, that is, iron and calcium, is investigated. Adsorption and desorption of the nucleotide were studied in the pH range of 2-12 at three levels of addition: 0.080, 0.268 and 0.803 mmole 5-prime-AMP per gram of clay. Two desorption stages were employed - H2O wash and NaOH extraction (pH = 12.0). 5-prime-AMP was preferentially adsorbed on the Fe-containing clays relative to the Ca clay. The nucleotide was fully recovered by the two desorption stages, mostly by the NaOH extraction. The evidence at hand indicates that 5-prime-AMP reaction with clay is affected by electrostatic interactions involving both attraction and repulsion forces. Some specific adsorption, possibly the result of covalent bonding and complex formation with the adsorbed ion, cannot be ruled out for iron but does not appear to operate for calcium. Changes in pH cause varying degrees of attaction and repulsion of 5-prime-AMP and may have been operating on the primitive earth, leading to sequences of adsorption and release of this biomolecule.