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NASA NTRS2020

A Global End-Member Approach to Derive aCDOM(440) from Near-Surface Optical Measurements

This study establishes an optical inversion scheme for deriving the absorption coefficient of colored (or chromophoric, depending on the literature) dissolved organic material (CDOM) at the 440 nm wavelength, which can be applied to global water masses with near-equal efficacy. The approach uses a ratio of diffuse attenuation coefficient spectral end members, i.e., a short and long wavelength pair. The global perspective is established by sampling "extremely" clear water plus a generalized extent in turbidity and optical properties that each span three decades of dynamic range. A unique data set was collected in oceanic, coastal, and inland waters (as shallow as 0.6 m) from the North Pacific Ocean, the Arctic Ocean, Hawaii, Japan, Puerto Rico, and the east and west coasts of the United States. The data were partitioned using subjective categorizations to define a validation quality subset of conservative water masses, i.e., the inflow and outflow of properties constrain the range in the gradient of a constituent, plus 15 subcategories of water masses that were not evolving conservatively. The dependence on subcategories was confirmed with an objective methodology based on cluster analysis techniques. The latter defined five distinct classes with validation quality data present in all classes, but which also decreased in percent composition as a function of increasing class number and optical complexity. Four different algorithms based on different validation quality end members were validated with accuracies of 1.–6.2 %, wherein pairs with the largest spectral span were most accurate. Although algorithm accuracy decreased with the inclusion of more subcategories containing non-conservative water masses, changes to the algorithm fit were small when a preponderance of subcategories were included. The high accuracy for all end-member algorithms was the result of data acquisition and data processing improvements, e.g., increased vertical sampling resolution to less than 1mm and a boundary constraint to mitigate wave focusing effects, respectively. An independent evaluation with a historical database confirmed the consistency of the algorithmic approach and its application to quality assurance, e.g., to flag data outside expected ranges, identify suspect spectra, and objectively determine the in-water extrapolation interval by converging agreement for all applicable end-member algorithms. The legacy data exhibit degraded performance (as 44 % uncertainty) due to a lack of high-quality near-surface observations, especially for clear waters wherein wave-focusing effects are problematic. The novel optical approach allows the in situ estimation of an in-water constituent in keeping with the accuracy obtained in the laboratory.

Stanford B Hooker↗

NASA NTRS2020

Neural Network Reflectance Prediction Model for Both Open Ocean and Coastal Waters

Remote sensing of global ocean color is a valuable tool for understanding the ecology and biogeochemistry of the worlds oceans, and provides critical input to our knowledge of the global carbon cycle and the impacts of climate change. Ocean polarized reflectance contains information about the constituents of the upper ocean euphotic zone, such as colored dissolved organic matter (CDOM), sediments, phytoplankton, and pollutants. In order to retrieve the information on these constituents, remote sensing algorithms typically rely on radiative transfer models to interpret water color or remote-sensing reflectance; however, this can be resource-prohibitive for operational use due to the extensive CPU time involved in radiative transfer solutions. In this work, we report a fast model based on machine learning techniques, called Neural Network Reflectance Prediction Model (NNRPM), which can be used to predict ocean bidirectional polarized reflectance given inherent optical properties of ocean waters. This supervised model is trained using a large volume of data derived from radiative transfer simulations for coupled atmosphere and ocean systems using the successive order of scattering technique (SOS-CAOS). The performance of the model is validated against another large independent test dataset generated from SOS-CAOS. The model is able to predict both polarized and unpolarized reflectances with an absolute error (AE) less than 0.004 for 99% of test cases. We have also shown that the degree of linear polarization (DoLP) for unpolarized incident light can be predicted with an AE less than 0.002 for 99% of test cases. In general, the simulation time of SOS-CAOS depends on optical depth, and required accuracy. When comparing the average speeds of the NNRPM against the SOS-CAOS model for the same parameters, we see that the NNRPM is able to predict the Ocean BRDF 6000 times faster than SOS-CAOS. Both ultraviolet and visible wavelengths are included in the model to help differentiate between dissolved organic material and chlorophyll in the study of the open ocean and the coastal zone. The incorporation of this model into the retrieval algorithm will make the retrieval process more efficient, and thus applicable for operational use with global satellite observations.

radiative transfer↗

NASA NTRS2021

Coastal California Water Resources: Assessing Estuarine Ecosystems in California for Improved Wetland Monitoring and Management

Estuaries are vital ecosystems that serve important ecological functions. The Marine Life Protection Act aims to protect these ecosystems by establishing a network of marine protected areas (MPAs), in part by requiring regulatory agencies to monitor estuary extent and health. However, California has 23 estuarine MPAs (EMPAs) and approximately 440,000 total acres of estuarine habitat and, therefore, ground-based data collection can be time and resource intensive. This project used remotely sensed data to examine the health of California EMPAs in an effort to supplement ground-based field measurements. Specifically using Landsat 8 Operational Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), this project assessed mouth state, inundation extent, turbidity, Chlorophyll-a, and colored dissolved organic matter (CDOM) for estuaries observable with these sensors. The Normalized Water Difference Index (NDWI) from Sentinel-2 MSI was capable of capturing estuary mouth state and inundation extent. Meanwhile, Landsat 8 OLI and Sentinel-2 MSI indicated a capacity to capture differences in water quality metrics coinciding with changes to estuary mouth state using algorithms applied in Google Earth Engine (GEE). The GEE California Estuary Assessment (CEA) tools will allow project partners to better monitor and understand estuarine dynamics and health.

Karina Alvarez↗

NASA NTRS2021

One- and Two-Band Sensors and Algorithms to Derive aCDOM(440) from Global Above- and In-Water Optical Observations

The colored (or chromophoric, depending on the literature) dissolved organic matter (CDOM) spectral absorption coefficient, aCDOM(λ), is a variable of global interest that has broad application in the study of biogeochemical processes. Within the funding for scientific research, there is an overarching trend towards increasing the scale of observations both temporally and spatially, while simultaneously reducing the cost per sample, driving a systemic shift towards autonomous sensors and observations. Legacy aCDOM(λ) measurement techniques can be cost-prohibitive and do not lend themselves toward autonomous systems. Spectrally rich datasets carefully collected with advanced optical systems in diverse locations that span a global range of water bodies, in conjunction with appropriate quality assurance and processing, allow for the analysis of methods and algorithms to estimate aCDOM(440) from spectrally constrained one- and two-band subsets of the data. The resulting algorithms were evaluated with respect to established fit-for-purpose criteria as well as quality assured archival data. Existing and proposed optical sensors capable of exploiting the algorithms and intended for autonomous platforms are identified and discussed. One-band in-water algorithms and two-band above-water algorithms showed the most promise for practical use (accuracy of 3.0% and 6.5%, respectively), with the latter demonstrated for an airborne dataset.

ocean color↗

NASA NTRS2021

Jobos Bay Water Resources: Using Earth Observations to Analyze Shoreline Changes and Understand the Effects of Sea Level Rise in Southern Puerto Rico

Jobos Bay is located on the southern coast of Puerto Rico, which is known for intense hurricane seasons and increased seasonal storm surge. Scientists at Jobos Bay National Estuarine Research Reserve (JBNERR) are concerned that sea level rise will exacerbate coastal damage from these weather events. Using NASA Earth observations, our team analyzed coastal change, land use land cover change (LULC), mangrove forest extent, and water quality of Jobos Bay. Using Google Earth Engine, we evaluated coastal change and mangrove forest habitat within the study region by classifying NASA Earth observation imagery. We created historic LULC composite images to observe how land use changes over time and improve understanding of urbanization in the watershed. Leveraging previous water quality studies, our team compared water quality datasets generated by the Optical Reef and Coastal Area Assessment (ORCAA) tool to in situ sensors provided by JBNERR partners to understand the overall quality of water in the study area with respect to turbidity, chlorophyll-a, sea surface temperature, and colored dissolved organic matter (CDOM) concentrations. We discovered that 17% of the reserve has shifted from land to water since 1997 and lost 4.85 square kilometers of mangrove habitat over the past decade. Results from this study will inform the scientists of JBNERR and community members of the regional impacts of sea level rise. Being the first comprehensive study done in the estuary in nearly a decade, this serves as a baseline for future conservation efforts and research in the estuary.

Olivia Spencer↗

NASA NTRS2022

Verification and Validation of Hybridspectral Radiometry Obtained from an Unmanned Surface Vessel (USV) in the Open and Coastal Oceans

The hardware and software capabilities of the compact-profiling hybrid instrumentation for radiometry and ecology (C-PHIRE) instruments on an unmanned surface vessel (USV) are evaluated. Both the radiometers and USV are commercial-off-the-shelf (COTS) products, with the latter being only minimally modified to deploy the C-PHIRE instruments. The hybridspectral C-PHIRE instruments consist of an array of 18 multispectral microradiometers with 10 nm wavebands spanning 320–875 nm plus a hyperspectral compact grating spectrometer (CGS) with 2048 pixels spanning 190–1000 nm. The C-PHIRE data were acquired and processed using two architecturally linked software packages, thereby allowing lessons learned in one to be applied to the other. Using standard data products and unbiased statistics, the C-PHIRE data were validated with those from the well-established compact-optical profiling system (C-OPS) and verified with the marine optical buoy (MOBY). Agreement between algorithm variables used to estimate colored dissolved organic matter (CDOM) absorption and chlorophyll a concentration were also validated. Developing and operating novel technologies, such as the C-PHIRE series of instruments, deployed on a USV increase the frequency and coverage of optical observations, which are required to fully support the present and next-generation validation exercises in radiometric remote sensing of aquatic ecosystems.

Hybridspectral↗

NASA NTRS2022

The Transformation and Export of Organic Carbon Across an Arctic River-Delta-Ocean Continuum

The Arctic Ocean is surrounded by land that feeds highly seasonal rivers with water enriched in high concentrations of dissolved and particulate organic carbon (DOC and POC). Explicit estimates of the flux of organic carbon across the land-ocean interface are difficult to quantify and many interdependent processes makes source attribution difficult. A high-resolution 3-D biogeochemical model was built for the lower Yukon River and coastal ocean to estimate biogeochemical cycling across the land-ocean continuum. The model solves for complex reactions related to organic carbon transformation, including mechanistic photodegradation and multi-reactivity microbial processing, DOC to POC flocculation, and phytoplankton dynamics. The baseline DOC and POC flux out of the delta from April to September 2019, was 977 and 536 Gg C (~80% of the annual total), but only 50% of the DOC and 25% of the POC exited the plume across the 10 m isobath. Microbial breakdown of DOC accounted for a net loss of 168 Gg C (17% of delta export) within the plume and photodegradation accounted for a net loss of 46.6 Gg C DOC (5% of delta export) in 2019. Flocculation decreased the total organic carbon flux by only 6.4 Gg C (~1%), while POC sinking accounted for 63.3 Gg C (10%) settling in the plume. The loss of chromophoric dissolved organic matter (CDOM) due to photodegradation increased the light available for phytoplankton growth throughout the coastal ocean, demonstrating the secondary effects that organic carbon reactions can have on biological processes and the net coastal carbon flux.

Land-Ocean Continuum↗