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At least 73 records · Page 4

Rare species do not disproportionately contribute to phylogenetic diversity in a subalpine plant community

Abstract Premise Within plant communities, few species are abundant, and most are locally rare. Worldwide, 36% of plant species are exceedingly rare and often face high extinction risk. However, the community phylogenetic impact of the loss of rare plants is largely unknown in many systems. We address this gap by investigating how rare species contribute to phylogenetic diversity, considering multiple metrics of rarity and multiple elevations in a subalpine plant community. Methods We collected abundance data at three sites near the Rocky Mountain Biological Laboratory (Colorado, USA). We calculated each species' range size from public occurrence data. We calculated phylogenetic signal for abundance and range size, compared community phylogenetic metrics weighted by range size and abundance to unweighted metrics, and quantified the change in phylogenetic diversity when removing single species and groups of species ranked by rarity. Results We found phylogenetic signal for abundance, but not range size. There was no difference between rarity‐weighted and ‐unweighted phylogenetic diversity metrics. Finally, phylogenetic diversity did not decline more when we removed single rare species or groups of rare species than when we removed single common species and groups of common species. Conclusions We found that rare species, whether at low abundance or with a small range, do not disproportionately contribute to phylogenetic diversity in our subalpine plant community. These results were consistent across elevations. Instead, rare species might provide phylogenetic redundancy with common species. Deeper understanding of functional differentiation is needed to understand contributions of rare species to this system.

Plant Sciences↗

Two-loop electroweak corrections to the Top-Quark Contribution to ϵ K

The parameter ϵ K measures CP violation in the neutral kaon system. It is a sensitive probe of new physics and plays a prominent role in the global fit of the Cabibbo-Kobabyashi-Maskawa matrix. The perturbative theory uncertainty is currently dominated by the top-quark contribution. Here, we present the calculation of the full two-loop electroweak corrections to the top-quark contribution to ϵ K , including the resummation of QED-QCD logarithms. We discuss different renormalization prescriptions for the electroweak input parameters. In the traditional normalization of the weak Hamiltonian with two powers of the Fermi constant G F , the top-quark contribution is shifted by –1%.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

A survey of nuclear quadrupole deformation in order to estimate the nuclear MQM and its relative contribution to the atomic EDM: Searching for the best candidate to focus on an atomic EDM measurement: A nuclear physics perspective

Abstract Measurement of a non-zero permanent electric dipole moment (EDM) in fundamental particles, such as in an electron or a neutron, or in nuclei or atoms, can help us gain a handle on the sources of Charge-Parity (CP) violation, both in the Standard Model (SM) and beyond. The nuclear magnetic quadrupole moment (MQM), the central topic of this work, is also CP, P, and T violating. Nucleons and nuclei have a non-zero MQM from sources within the SM, but the nuclear MQM is dramatically enhanced if the nuclei are structurally quadrupole deformed. Multiple sources contribute to an atomic EDM namely: (i) nuclear EDM through its Schiff moment, which is enhanced by nuclear octupole deformation, (ii) CP violating interactions between the electrons and the nuclei, and (iii) the nuclear MQM that contributes to the atomic EDM in atoms with an unpaired valence electron. Our survey of nuclear quadrupole deformation identified 48 isotopes as ideal systems in which to search for a CP violating EDM via their enhanced nuclear MQM. Of these candidates, $$^{223,225}$$ 223 , 225 Fr, $$^{223}$$ 223 Ra, $$^{223,225,227}$$ 223 , 225 , 227 Ac, $$^{229}$$ 229 Th, and $$^{229}$$ 229 Pa also have maximally enhanced nuclear Schiff moment contribution due to their octupole deformation. Laser cooling of the isotopes of Fr and Ra, among a few others, has already been demonstrated, making $$^{223,225}$$ 223 , 225 Fr and $$^{223}$$ 223 Ra some of the best systems in which to measure an EDM.

MohanMurthy, Prajwal↗

Estimating the Contribution of the Nickel to Protium Loading of Full-Length Getters

The full-length getter (FLG) is a critical component of the tritium producing burnable absorber rod (TPBAR), designed to capture tritium produced within the lithium aluminate pellets. However, due to the chemical similarity between protium (¹H) and tritium (³H), the FLG readily absorbs protium, reducing its capacity to absorb tritium and increasing the risk of tritium permeation into the reactor coolant. This study evaluates protium produced from neutron irradiation of nickel plating on the FLG through 5?Ni(n,p) reactions, quantifies its contribution to the total protium observed, and informs models of tritium and hydrogen transport within TPBARs. During irradiation, neutron capture by 58Ni results in the formation of 5?Ni, which undergoes neutron bombardment to produce 4He via 5?Ni(n,a) reactions and protium via 5?Ni(n,p) reactions. The measured helium content post-irradiation provides insight into the neutron capture processes within the getter. The 4He measured within the getter may be useful in determining hydrogen produced by the nickel plating on FLG because 59Ni also produces protium in a 59Ni(n, p) reaction. The contribution of 1H from the nickel in FLG contributed less than 1% of the measured H2 gas in PIE, ranging from 0.005% to 0.614%. These findings refine current knowledge of the protium-tritium interplay in TPBARs and support the development of improved transport models for tritium and hydrogen, ultimately aiding in the optimization of TPBAR design and reactor operations.

Arbova, Dana L.↗

A Review of Coccidioides Research, Outstanding Questions in the Field, and Contributions by Women Scientists

Abstract Purpose of Review Coccidioidomycosis is an infectious disease that gained clinical significance in the early 20th century. Many of the foundational contributions to coccidioidomycosis research, including the discovery of the fungal disease agent, Coccidioides spp., were made by women. We review recent progress in Coccidioides research and big questions remaining in the field, while highlighting some of the contributions from women. Recent Findings New molecular-based techniques provide a promising method for detecting Coccidioides, which can help determine the dominate reservoir host and ideal environmental conditions for growth. Genetic and genomic analyses have allowed an understanding of population structure, species level diversity, and evolutionary histories. We present a current, comprehensive genome list, where women contributed many of these entries. Several efforts to develop a coccidioidomycosis vaccine are underway. Summary Women continue to pioneer research on Coccidioides, including the relationships between the fungi and the environment, genetics, and clinical observations. Significant questions remain in the field of Coccidioides, including the main host reservoir, the relationships between genotypic and phenotypic variation, and the underlying cause for chronic clinical coccidioidomycosis cases.

59 BASIC BIOLOGICAL SCIENCES↗

Grain boundary segregation beyond the dilute limit: Separating the two contributions of site spectrality and solute interactions

Solute segregation at grain boundaries (GBs) is known to have a profound impact on material properties, and as such is becoming routinely used as an element in alloy design. Beyond the dilute limit, the extent of solute GB segregation is known to be concentration dependent. Using hybrid Monte Carlo/Molecular Statics simulations of Mg segregation in Al, in this work we decouple the two contributions to this composition dependence: (i) spectrality of atomic environments at the boundary and (ii) solute-solute interactions. Although only contribution (ii) is typically considered in the literature, we argue that both contributions are equally important to understand concentration dependence and correctly quantify GB solute segregation in a binary alloy. Finally, a thermodynamic segregation isotherm is outlined that accounts for both the spectrality of grain boundary sites and solute-solute interactions. Unlike classical isotherms like those of McLean or Fowler-Guggenheim, which can be successfully fitted to GB segregation data only over a limited range of composition and temperature, our proposed model is shown to be accurate across the composition-temperature space.

36 MATERIALS SCIENCE↗

Contributions of anoxic microsites to soil carbon protection across soil textures

Anoxic microsites, zones of oxygen depletion in otherwise oxic soils, may slow soil C turnover. However, the abundance of anoxic microsites and their contribution to soil C protection is yet undefined. In this study, we determine the contribution of anoxic microsites to soil C protection in soils of three distinct textures (clay loam, loam, sandy loam) across a range of soil moistures. We examined the influence of soil oxygen supply by increasing oxygen content in the incubation atmosphere (oxygen enrichment) and through disaggregation. We attributed increases in CO 2 efflux to the aeration of anoxic microsites. The contribution of anoxic microsites to soil C protection increased with decreasing clay content. Clay loam CO 2 efflux was relatively unaffected by aeration. Moderately moist, loam soils had CO 2 effluxes that did not increase with oxygen enrichment but increased by 375% upon disaggregation. Sandy loam soil CO 2 efflux increased by 50–75% with oxygen enrichment and 250% with disaggregation. Geochemical and microbial data reveal that anoxic microsite abundance also increased with decreasing clay content. The proportion of acid extractable Fe present as Fe(II) increased with decreasing clay content, and methanogens were more abundant in loam and sandy loam soils. Our results suggest that oxygen demand, rather than supply, can regulate anoxic microsite formation and that anoxic protection of soil C can be diminished through physical disruption of soil structure. Our findings further illustrate that anoxic microsites should be included in conceptual models of soil C protection to avoid soil C loss and improve predictions of soil C response to disturbance.

58 GEOSCIENCES↗

Call attention to using DRT and EIS to quantify the contributions of solid oxide cell components to the total impedance

The contributions of anode and cathode processes to solid oxide fuel cell (SOFC) impedance were studied using electrochemical impedance spectroscopy (EIS) and distribution of relaxation time (DRT). Specifically, the role of gas composition at both anode and cathode was explored in a systematic study aimed at deconvoluting, identifying and quantifying the contributions of different anode and cathode processes. Further, five distinct relaxation time distributions were observed in the DRT spectra; although the peaks were ascribed to diffusion and charge transfer processes at the electrodes, it was found that both electrodes contributed to various peaks at the same time. Moreover, it was found that two distinctive operating conditions could return equivalent DRT spectra. While DRT analysis allows to obtain useful information regarding cell performance, extra consideration is needed when assessing and quantifying anodic and cathodic resistances within the SOFC.

08 HYDROGEN↗

The diffractive contribution to deep inelastic lepton-proton scattering: Implications for QCD momentum sum rules and parton distributions

The cross section for deep inelastic lepton-proton scattering (DIS) ℓp→ℓ'p'X includes a diffractive deep inelastic (DDIS) contribution ℓp→ℓ'p'X, in which the proton remains intact with a large longitudinal momentum fraction x F greater than 0.9 and small transverse momentum. The DDIS events, which can be identified with Pomeron exchange in the t-channel, account for approximately 10% of all of the DIS events. Thus, when one measures DIS, one automatically includes the leading-twist Bjorken-scaling DDIS events as a contribution to the DIS cross section, whether or not the final-state proton p' is detected. In such events, the missing momentum fraction x p ' ~0.9 carried by the final-state proton p' in the DDIS events could be misidentified with the light-front momentum fraction carried by sea quarks or gluons in the protons' Fock structure. As we shall show in this article, the underlying QCD Pomeron-exchange amplitude which produces the DDIS events does not obey the operator product expansion nor satisfy momentum sum rules. Thus we conclude that the quark and gluon distributions measured in DIS experiments will be misidentified, unless the measurements explicitly exclude the DDIS events and that a correct determination of the parton distribution functions (PDFs) derived from the DIS data requires the explicit subtraction of the DDIS contribution from the full DIS cross section.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Vibrational Spin-Orbit Coupling Contributions to Excited State Decay of Ligand-to-Ligand Charge Transfer States

Controlling excited state relaxation processes is important in a variety of photochemical and photophysical processes, including the generation of ground and excited state spin polarization for quantum information science applications. Here, we address how specific static distortions – based on vibrational spin-orbit active modes at C2v symmetry determined by group theory – in a series of low-symmetry ligand-to-ligand charge transfer complexes enable direct spin-orbit coupling contributions to T1 → S0 excited state decay. These results are used to address spin-vibronic coupling contributions to T1 → S0 decay in a high-symmetry (tBu2bpy)Pt(S,S) (tBu2bpy = 4,4’-di-tert-butyl-2,2’-bipyridine and S,S = benzene-1,2-dithiolate) ligand-to-ligand charge transfer complex with effective C2v symmetry, where T1 relaxation is both spin- and orbitally forbidden due to the direct spin-orbit coupling matrix element being zero by symmetry. Low-frequency vibrations that involve a pyridine-pyridine twisting motion within the bpy ligand generate large ∂/∂Qi values that will contribute significantly to T1 → S0 relaxation. The work advances ligand design strategies for the generation of tailored T1 → S0 relaxation rates, which can be utilized to optimize the generation of electron spin polarization in radical-elaborated ligand-to-ligand charge transfer complexes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Quantifying the Contributions of Aerosol- and Snow-Produced ClNO 2 through Observations and 1D Modeling

Nitryl chloride (ClNO 2 ) is a radical reservoir that forms and accumulates in the nocturnal atmospheric boundary layer influenced by combustion emissions and chloride (e.g., sea salt and road salt). Upon sunrise, ClNO 2 rapidly photolyzes to generate highly reactive chlorine radicals (Cl • ) that affect the air quality by generating secondary air pollutants. Recent studies have shown road salt aerosols and saline snowpack to be sources of ClNO 2 in the wintertime urban environment; however, the quantitative contributions of each chloride source are not known. In this study, we examine the vertically resolved contributions of aerosol particles and saline snowpack as sources of ClNO 2 by using an observationally constrained snow–atmosphere coupled one-dimensional model applied to wintertime Kalamazoo, Michigan, U.S. Model simulations show that ClNO 2 emitted from urban snowpack can be vertically transported throughout the entire atmospheric boundary layer and can be a significant source of ClNO 2 , contributing up to ~60% of the ClNO 2 budget near the surface. Here, modeled snowpack ClNO 2 emission rates were 6 (±7) times higher than the observationally derived emission rates, suggesting that not all snow chloride is available for reaction. ClNO 2 production from both aerosol particles and snow emissions are required to best simulate the observed surface-level ClNO 2 . Using the traditional bulk parameterization for ClNO 2 produced from particles significantly overestimated ClNO 2 due to the assumption of having equivalent dinitrogen pentoxide (N 2 O 5 ) uptake and chloride availability for the entire particle population. In comparison, the chemically resolved surface area-based parameterization slightly underestimated the observations and had uncertainties deriving from ClNO 2 production from residential wood burning particles.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Contribution of Speciated Monoterpenes to Secondary Aerosol in the Eastern North Atlantic

Extension of laboratory results suggests that monoterpenes, a subset of marine biogenic volatile organic compounds, might play a competitive role in secondary aerosol formation in the remote marine atmosphere, where the oxidation of dimethyl sulfide has traditionally been thought to dominate. However, the current assessment of the role of monoterpenes in secondary aerosol formation in the remote marine atmosphere is limited by the scarcity of speciated monoterpene measurements and the complete absence of collocated measurements of particle chemical composition and monoterpene speciation. Here, in this paper, we present measurements of gas-phase volatile organic compounds, with particular focus on speciated monoterpenes, and commensurate measurements of aerosol chemical composition in the Eastern North Atlantic. The average monoterpene concentration in periods of marine air was 14 ± 10 ppt, and the dominant isomer was β-pinene (46 ± 10%), with other contributions from α-pinene, limonene, and β-ocimene. The total monoterpene concentration in marine air was greater than that of isoprene by a factor of 3.9 on average, in contrast to prior research and potentially due to the large β-pinene contribution. Monoterpenes were significantly smaller in concentration than dimethyl sulfide, which was also highlighted by the substantial contribution of sulfate to non-refractory submicron aerosol. The mean and interquartile range of the sulfate to organic aerosol mass ratio in clean marine air were 2.7 (0.7–3.4). Finally, a simple box model analysis showed that the BVOC precursors, dimethyl sulfide, methanethiol, monoterpenes, and isoprene, could sustain the measured sulfate to organic aerosol ratio in clean marine air.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Relative Contributions of Atmospheric, Oceanic, and Coupled Processes to North Pacific and North Atlantic Variability

Patterns of sea surface temperature (SST) variability over the northern oceans arise from a combination of atmospheric, oceanic, and coupled processes. In this work, we use a novel methodology and a suite of observations to quantify the processes contributing to the dominant patterns of interannual SST variability over these regions. We decompose the upper ocean heat content tendency associated with such dominant patterns into contributions from different heat fluxes: (a) atmospherically driven, (b) surface feedbacks, and (c) oceanic. We find that in the subtropics, cloud radiative flux, turbulent heat flux, and residual oceanic processes each contributes substantially to North Pacific SST variability, whereas turbulent heat flux primarily induces North Atlantic SST variability. Cloud radiative fluxes therefore provide a major source of interannual SST variability in the North Pacific but not in the North Atlantic. In midlatitudes, SST fluctuations over the northern oceans are driven by the combination of turbulent and oceanic heat fluxes.

54 ENVIRONMENTAL SCIENCES↗

Contribution of Atmospheric Rivers to Antarctic Precipitation

Abstract Atmospheric rivers (ARs) are efficient mechanisms for transporting atmospheric moisture from low latitudes to the Antarctic Ice Sheet (AIS). While AR events occur infrequently, they can lead to extreme precipitation and surface melt events on the AIS. Here we estimate the contribution of ARs to total Antarctic precipitation, by combining precipitation from atmospheric reanalyses and a polar‐specific AR detection algorithm. We show that ARs contribute substantially to Antarctic precipitation, especially in East Antarctica at elevations below 3,000 m. ARs contribute substantially to year‐to‐year variability in Antarctic precipitation. Our results highlight that ARs are an important component for understanding present and future Antarctic mass balance trends and variability.

54 ENVIRONMENTAL SCIENCES↗

The Contribution of Subtropical Moisture Within an Atmospheric River on Moisture Flux, Cloud Structure, and Precipitation Over the Salmon River Mountains of Idaho Using Moisture Tracers

The impact of an atmospheric river (AR) on the flux of subtropical moisture across Idaho's Salmon River Mountains and precipitation over the mountains is evaluated using the Weather, Research, and Forecasting model with water vapor tracers (WRF-WVT). The AR impacted Idaho between 17 and 19 January 2017 during the Seeded and Natural Orographic Wintertime Clouds: The Idaho Experiment (SNOWIE) campaign. WRF-WVT is configured to isolate the subtropical moisture contribution to the AR, the moisture flux, and precipitation. Subtropical water vapor advected by the AR into Idaho is tagged and tracked in three-dimensional space throughout the run. This allows the contribution of the subtropical moisture to the vertical distribution of water vapor and the precipitation to be directly calculated. The simulated cloud structure is compared with airborne radar data collected during two SNOWIE intensive operation periods. This study found that more than 70% of the moisture flux and more than 80% of the precipitation across the Idaho Mountains during SNOWIE IOP 4 could be attributed to subtropical moisture within the AR. Nearly all of the moisture flux in the upper cloud and 50% of the moisture in the lower cloud was attributable to the subtropical moisture. The subtropical moisture contribution within the AR to precipitation ranged from 35% in northern Idaho to more than 90% in southern Idaho. Across the entire period of impact of the AR, more than 60% of precipitation in Idaho was attributable to the subtropical moisture within the AR, with this percentage increasing toward the south across the state.

54 ENVIRONMENTAL SCIENCES↗

Biodiversity and Stoichiometric Plasticity Increase Pico‐Phytoplankton Contributions to Marine Net Primary Productivity and the Biological Pump

Earth System Models generally predict increasing upper ocean stratification from 21st century warming, which will cause a decrease in the vertical nutrient flux forcing declines in marine net primary productivity (NPP) and carbon export. Recent advances in quantifying marine ecosystem carbon to nutrient stoichiometry have identified large latitudinal and biome variability, with low-latitude oligotrophic systems harboring pico-sized phytoplankton exhibiting large phosphorus to carbon cellular plasticity. The climate forced changes in nutrient flux stoichiometry and phytoplankton community composition are thus likely to alter the ocean's biogeochemical response and feedback with the carbon-climate system. We have added three pico-phytoplankton functional types within the Biogeochemical Elemental Cycling component of the Community Earth System Model while incorporating variable cellular phosphorus to carbon stoichiometry for all represented phytoplankton types. The model simulates Prochlorococcus and Synechococcus populations that dominate the productivity and sinking carbon export of the tropical and subtropical ocean, and pico-eukaryote populations that contribute significantly to productivity and export within the subtropical to mid-latitude transition zone, with the western subtropical regions of each basin supporting the most P-poor stoichiometries. Subtropical gyre recirculation regions along the poleward flanks of surface western boundary currents are identified as regional hotspots of enhanced carbon export exhibiting C-rich/P-poor stoichiometry, preferentially inhabited by pico-eukaryotes and diatoms. Collectively, pico-phytoplankton contribute ∼58% of global NPP and ∼46% of global particulate organic carbon export below 100 m through direct and ecosystem processing pathways. Biodiversity and cellular nutrient plasticity in marine pico-phytoplankton combine to increase their contributions to ocean productivity and the biological carbon pump.

Environmental Sciences & Ecology↗

Mixing of the Connecticut River Plume During Ambient Flood Tides: Spatial Heterogeneity and Contributions of Bottom–Generated and Interfacial Mixing

The Connecticut River plume is influenced by energetic ambient tides in the Long Island Sound receiving waters. The objectives of this modeling study are (a) characterizing the spatial heterogeneity of turbulent buoyancy fluxes, (b) partitioning turbulent buoyancy fluxes into bottom-generated and interfacial shear contributions, and (c) quantifying contributions to plume-integrated mixing within the tidal plume. The plume formed during ambient flood tides under low river discharge, spring tides, and no winds is analyzed. Turbulent buoyancy fluxes (B) and depth-integrated B through the plume (Bd) are characterized by pronounced spatial heterogeneity. Strong mixing (Bd ~ 10 –5 -10 –4 m 3 /s 3 ) occurs near the mouth, in the nearfield plume turning region, over shoals, and nearshore shallow areas. Low to moderate mixing (Bd ~ 10 –8 -10 –6 m 3 /s 3 ) occupies half the plume. Buoyancy fluxes are first partitioned based on the depth of the shear stress minimum between plume-generated and bottom-generated shear maxima. Four other tested partitioning methods are based on open channel flow and stratified shear flow parameterizations. Interfacial and bottom-generated shear contribute to different areas of intense and moderate mixing. All methods indicate a significant plume mixing role for bottom-generated mixing, but interfacial mixing is a bigger contributor. Plume-integrated total and interfacial mixing peak at max ambient flood and the timing of peak bottom-generated mixing varies among partitioning methods. Two-thirds of the mixing occurs in concentrated intense mixing areas. A parameter space with the ambient tidal Froude number and plume thickness to depth ratio as axes indicates many tidally modulated plumes are moderately to dominantly influenced by bottom-generated tidal mixing.

54 ENVIRONMENTAL SCIENCES↗

Contributions From Cloud Morphological Changes to the Interannual Shortwave Cloud Feedback Based on MODIS and ISCCP Satellite Observations

The surface temperature-mediated change in cloud properties, referred to as the cloud feedback, continues to dominate the uncertainty in climate projections. A larger number of contemporary global climate models (GCMs) project a higher degree of warming than the previous generation of GCMs. This greater projected warming has been attributed to a less negative cloud feedback in the Southern Ocean. Here, we apply a novel “double decomposition method” that employs the “cloud radiative kernel” and “cloud regime” concepts, to two data sets of satellite observations to decompose the interannual cloud feedback into contributions arising from changes within and shifts between cloud morphologies. Our results show that contributions from the latter to the cloud feedback are large for certain regimes. We then focus on interpreting how both changes within and between cloud morphologies impact the shortwave cloud optical depth feedback over the Southern Ocean in light of additional observations. Results from the former cloud morphological changes reveal the importance of the wind response to warming increases low- and mid-level cloud optical thickness in the same region. Results from the latter cloud morphological changes reveal that a general shift from thick storm-track clouds to thinner oceanic low-level clouds contributes to a positive feedback over the Southern Ocean that is offset by shifts from thinner broken clouds to thicker mid- and low-level clouds. Our novel analysis can be applied to evaluate GCMs and potentially diagnose shortcomings pertaining to their physical parameterizations of particular cloud morphologies.

58 GEOSCIENCES↗