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At least 73 records · Page 4

Streamflow measurements from four sites on the Tuolumne River in Yosemite National Park from Water Years 2002 to 2021

Regions with remote and complex terrain experience spatially varying streamflow patterns, but are often poorly sampled due to difficult access. This data package includes streamflow measurements collected using low-visibility and low-impact installations at four sites on the Tuolumne River in Yosemite National Park, for water years 2002 to 2021. The resulting data set offers a unique opportunity to explore hydrologic processes in complex terrain.This data package contains half-hourly recordings of unvented pressure, vented pressure, and water temperature are measured and used to estimate discharge and stage height. Discharge flags provide insight into data anomalies. This dataset is formatted in accordance with ESS-Dive's Hydrologic Monitoring and File Level Metadata Formats. It contains the following files:1) Folder containing four csv files of time series streamflow measurements (unvented pressure, vented pressure, estimated discharge, water temperature, stage height, and discharge flag) from four locations on the Tuolumne River2) Data dictionary (dd.csv) containing units, definitions, human readable column names, and data type for all column headers throughout the dataset3) File-level metadata (FLMD.csv) containing metadata for files contained in the dataset4) Installation methods (InstallationMethods.csv) containing metadata on sensor installation

54 ENVIRONMENTAL SCIENCES↗

Soil Temperature Sensor Data, May - December 2024, Five sites in Knoxville, Tennessee

This dataset contains surface soil temperature measurements from five urban parks in Knoxville: Cumberland Estates Park (CE), Socially Equal Energy Efficient Development (SD), West View Park (WV), Victor Ashe Park (VA), and West Hills Park (WH). The dataset comprises 29 Excel (.xlsx) and Comma-Separated Values (.csv) files documenting soil temperature recorded by six HOBO Pendant MX Water Temperature Data Loggers at each site, except for CE, which has five sensors. Each logger was installed at a depth of 10 inches and positioned approximately 3 to 6 feet from the weather station at each site. To open both csv and xlsx files, users can utilize spreadsheet applications such as Microsoft Excel, Google Sheets, LibreOffice Calc, and Apple Numbers. This dataset is part of a broader study examining the effects of soil moisture and plant evapotranspiration on ambient temperature and relative humidity across multiple urban parks in Knoxville, Tennessee.

EARTH SCIENCE > LAND SURFACE > SOILS↗

Point-spread Function Deconvolution of the IFU Data and Restoration of Galaxy Stellar Kinematics

We present a performance test of the point-spread function (PSF) deconvolution algorithm applied to astronomical integral field unit (IFU) spectroscopy data for restoration of galaxy kinematics. We deconvolve the IFU data by applying the Lucy–Richardson algorithm to the 2D image slice at each wavelength. We demonstrate that the algorithm can effectively recover the true stellar kinematics of the galaxy, by using mock IFU data with a diverse combination of surface brightness profile, signal-to-noise ratio, line-of-sight geometry, and line-of-sight velocity distribution (LOSVD). In addition, we show that the proxy of the spin parameter ${\lambda }_{{R}_{e}}$ can be accurately measured from the deconvolved IFU data. We apply the deconvolution algorithm to the actual SDSS-IV MaNGA IFU survey data. The 2D LOSVD, geometry, and ${\lambda }_{{R}_{e}}$ measured from the deconvolved MaNGA IFU data exhibit noticeable differences compared to the ones measured from the original IFU data. The method can be applied to any other regular-grid IFU data to extract the PSF-deconvolved spatial information.

79 ASTRONOMY AND ASTROPHYSICS↗

Taxogenomic Analysis of a Novel Yeast Species, Lachancea rosae Sp. Nov. F.A., Isolated From the Wild Rose Rosa californica

A novel Saccharomycotina yeast strain, yHQL494, was isolated from the rose hip of the wild rose Rosa californica from Castle Crags State Park, California, USA. Phylogenetic analyses of both whole genome data and the sequences from the D1/D2 region of the large ribosomal subunit (LSU) rRNA gene placed strain yHQL494 within the genus Lachancea and grouped it into a clade with Lachancea lanzarotensis and Lachancea meyersii. Taxogenomic analyses were conducted on publicly available genome sequences to gain a deeper insight into the carbon and nitrogen gene-trait associations across the Lachancea clade. The results of these analyses were found to be consistent across Lachancea species. Growth assays and microscopic analyses were conducted to determine the physiological characteristics of strain yHQL494, including the presence of hyphae or pseudohyphae, ascospore formation, fermentation abilities, and assimilation of carbon and nitrogen compounds. Based on the phenotypic and genomic characteristics of the strain yHQL494 T (=NRRL Y-64858 T , =CBS 18,574 T ), we propose a new species, Lachancea rosae sp. nov. f.a.

Bajgain, Yakendra [Villanova Univ., PA (United Sta↗

Current data are consistent with flat spatial hypersurfaces in the Λ CDM cosmological model but favor more lensing than the model predicts

Here, we study the performance of three pairs of tilted, and a pair of untilited, ΛCDM cosmological models, with three of these four pairs allowing for non-flat spatial hypersurfaces, against cosmic microwave background (CMB) temperature and polarization power spectrum data (P18), measurements of the Planck 2018 lensing potential power spectrum (lensing), and a large compilation of non-CMB data (non-CMB). For the eight models, we measure cosmological parameters and study whether or not pairs of the data sets (as well as subsets of them) are mutually consistent in these models. Half of these models allow the lensing consistency parameter A L , which re-scales the gravitational potential power spectrum, to be an additional free parameter to be determined from data, while the other three have A L = 1 which is the theoretically expected value. The pair of untilted non-flat ΛCDM models are incompatible with P18 data. The tilted spatially-flat models assume the usual primordial spatial inhomogeneity power spectrum that is a power law in wave number. The tilted non-flat models assume either the primordial power spectrum used in the Planck group anal yses [Planck P(q)], that has recently been numerically shown to be a good approximation to what is quantum-mechanically generated from a particular choice of closed inflation model initial conditions, or a recently computed power spectrum [new P(q)] that quantum-mechanically follows from a different set of non-flat inflation model initial conditions. In the tilted non-flat models with A L = 1 we find differences between P18 data and non-CMB data cosmological parameter constraints, which are large enough to rule out the Planck P(q) model at 3σ but not the new P(q) model. No significant differences are found when cosmological parameter constraints obtained with two different data sets are compared within the standard tilted flat ΛCDM model. While both P18 data and non-CMB data separately favor a closed geometry, with spatial curvature density parameter Ω k < 0, when P18+non-CMB data are jointly analyzed the evidence in favor of non-flat hypersurfaces subsides. Differences between P18 data and non-CMB data cosmological constraints subside when A L is allowed to vary. From the most restrictive P18+lensing+non-CMB data combination we get almost model-independent constraints on the cosmological parameters and find that the A L > 1 option is preferred over the Ω k < 0 one, with the A L parameter, for all models, being larger than unity by ~ 2.5σ. According to the deviance information criterion, in the P18+lensing+non-CMB analysis, the varying A L option is on the verge of being strongly favored over the A L = 1 one, which could indicate a problem for the standard tilted flat ΛCDM model. These data are consistent with flat spatial hypersurfaces but more and better data could improve the constraints on Ω k and might alter this conclusion. Error bars on some cosmological parameters are significantly reduced when non-CMB data are used jointly with P18+lensing data. For example, in the tilted flat ΛCDM model for P18+lensing+non-CMB data the Hubble constant H 0 = 68.09 ± 0.38 km s -1 Mpc -1 , which is consistent with that from a median statistics analysis of a large compilation of H 0 measurements as well as with a number of local measurements of the cosmological expansion rate. This H 0 error bar is 31% smaller than that from P18+lensing data alone.

79 ASTRONOMY AND ASTROPHYSICS↗

Light Energy Transduction in Green Sulfur Bacteria

Green sulfur bacteria (GSB) are exquisitely adapted for growth at extraordinarily low light intensities. They are important primary producers of biomass in many anoxic environments, and they contribute significantly to the biogeochemical cycling of carbon, nitrogen, and sulfur on Earth. Green bacteria more generally share the property of using chlorosomes for light-harvesting, and these unusual organelles have many unique features. These include the presence of a monolayer lipid-protein envelope, self-assembling bacteriochlorophylls (BChl) in which pigment-pigment interactions predominate, and the presence of redox components ([2Fe-2S] ferredoxins and quinones) that play a role in regulating excitation energy transfer to the type-1 homodimeric reaction centers. The reaction centers of GSB are related to Photosystem I of cyanobacteria and higher plants but also exhibit several unique structural and functional features. The long-term objectives of this research program are to understand the structure, functions, and biogenesis of the chlorosomes, reaction centers, and electron transport chains that carry out the photochemical transduction of light energy into chemical energy in the model green sulfur bacterium, Chlorobaculum (formerly Chlorobium) tepidum. Over a period of 26 years, we characterized chlorosomes in detail. We identified the proteins in the chlorosome envelopes of diverse organisms, identified the nearest neighbors of those proteins, and characterized the chlorosomes of mutant strains lacking one to five of these proteins. After the genome sequence of Cba. tepidum became available, we identified all genes encoding enzymes for BChl a , BChl c/d/e/ƒ , and Chl a biosynthesis Cba. tepidum . We additionally identified all genes encoding enzymes for carotenoid biosynthesis. By constructing a bchQRU mutant strain that produces [Et, Me]-BChl d , together with collaborators who are specialists in solid-state NMR and cryo-electron microscopy, we solved the structure of the BChls in chlorosomes. Using similar methods and chlorosomes containing [Et, Me]-BChl c , we then showed that alternative structures were possible using the same syn-anti BChl dimer. The structures were refined by introducing spectroscopic data from single-chlorosome measurements. Over the course of this project, we sequenced the genomes of approximately twenty GSB strains, which provided important information for comparative analyses. Through analyses of metagenomic data from Mushroom and Octopus Springs in Yellowstone National Park, we identified a novel chlorophototroph belonging to the phylum Acidobacteriota. We successfully isolated an axenic culture of this organism. We characterized the photosynthetic apparatus of this bacterium, named Chloracidobacterium thermophilum, in significant detail, in particular its type-1, homodimeric reaction centers. Surprisingly, these reaction centers contain three types of Chls, BChl a , Chl a , and Zn-BChl a' . We showed that a dimer of Zn-BChl a' is the primary donor and Chl a the primary acceptor of electrons in this reaction center by using advanced spectroscopic techniques. We isolated eight additional strains of Chloracidobacterium spp. from Mushroom Spring and Rupite hot springs in Bulgaria. Comparative genomes showed that these represent three species, Cab. thermophilum , Cab. aggregatum , and Cab. validum . By applying comparative genomics, genetic, biochemical biophysical and physiological approaches to study green bacteria, we produced a wealth of new information about the remarkable light-harvesting and energy transduction capabilities of these poorly characterized microorganisms.

59 BASIC BIOLOGICAL SCIENCES↗

Verification and Validation Tests of the Gamma Library of the ARC Software Package (Rev.1)

As part of the verification and validation (V&V) efforts of the Argonne Reactor Code (ARC) software system to support the Versatile Test Reactor (VTR) project of the U.S. Department of Energy (DOE), work has been performed to verify and validate the gamma (or photon) library of the multigroup cross section generation code MC 2 -3 of the ARC system, which is the essential part of the coupled neutron and gamma heating calculations to determine the heat generation rate or power distribution in the core. This V&V study was carried out in three steps: 1) review of the procedures and utility programs for generating the MC 2 -3 gamma library, 2) verification tests of cross sections and KERMA factors by comparing the total heat generation rate of coupled neutron and gamma calculation with that obtained with reaction Q values under the assumption of local gamma energy deposition and by comparing the prompt heat generation rate with that calculated with the MCNP6.2 code, and 3) validation tests of cross sections and KERMA factors by analyzing the ZPPR-15D gamma dose data measured with thermoluminescent dosimeters (TLD).

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Recognizability of Demographically Altered Computerized Facial Approximations in an Automated Facial Recognition Context for Potential Application in Unidentified Persons Data Repositories

This study examined the recognizability of demographically altered facial approximations for potential utility in unidentified persons tracking systems. Five computer-generated approximations were generated for each of 26 African male participants using the following demographic parameters: (i) African male (true demographics), (ii) African female, (iii) Caucasian male, (iv) Asian male, and (v) Hispanic male. Overall, 62% of the true demographic facial approximations for the 26 African male participants examined were matched to a corresponding life photo within the top 50 images of a candidate list generated from an automated blind search of an optimally standardized gallery of 6159 photographs. When the African male participants were processed as African females, the identification rate was 50%. In contrast, less congruent identification rates were observed when the African male participants were processed as Caucasian (42%), Asian (35%), and Hispanic (27%) males. The observed results suggest that approximations generated using the opposite sex may be operationally informative if sex is unknown. The performance of approximations generated using alternative ancestry assignments, however, was less congruent with the performance of the true demographic approximation (African male) and may not yield as operationally constructive data as sex-altered approximations.

59 BASIC BIOLOGICAL SCIENCES↗

Latent Stochastic Differential Equations for Modeling Quasar Variability and Inferring Black Hole Properties

Quasars are bright and unobscured active galactic nuclei (AGN) thought to be powered by the accretion of matter around supermassive black holes at the centers of galaxies. The temporal variability of a quasar’s brightness contains valuable information about its physical properties. The UV/optical variability is thought to be a stochastic process, often represented as a damped random walk described by a stochastic differential equation (SDE). Upcoming wide-field telescopes such as the Rubin Observatory Legacy Survey of Space and Time (LSST) are expected to observe tens of millions of AGN in multiple filters over a ten year period, so there is a need for efficient and automated modeling techniques that can handle the large volume of data. Latent SDEs are machine learning models well suited for modeling quasar variability, as they can explicitly capture the underlying stochastic dynamics. In this work, we adapt latent SDEs to jointly reconstruct multivariate quasar light curves and infer their physical properties such as the black hole mass, inclination angle, and temperature slope. Our model is trained on realistic simulations of LSST ten year quasar light curves, and we demonstrate its ability to reconstruct quasar light curves even in the presence of long seasonal gaps and irregular sampling across different bands, outperforming a multioutput Gaussian process regression baseline. Our method has the potential to provide a deeper understanding of the physical properties of quasars and is applicable to a wide range of other multivariate time series with missing data and irregular sampling.

79 ASTRONOMY AND ASTROPHYSICS↗

The GammaTPC Gamma-Ray Telescope Concept

We present GammaTPC, a transformative 0.1-10 MeV $\gamma$-ray instrument concept featuring a tracker using a liquid argon time projection chamber (LAr TPC) technology with the novel GAMPix high spatial resolution and ultra low power charge readout. These enable an economical instrument with unprecedented effective area and sensitivity. We discuss the design and technology in some detail, including how a LAr TPC can be staged in space. Finally, we present a first study of the sensitivity of the instrument in the Compton regime using a new framework for analyzing Compton telescope data.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

An Experimental Investigation of Students? Learning Effects When Using a Simplified Nuclear Simulator

This study focuses on investigating students' learning effects and performance trends over a certain period using the Rancor Microworld Simulator. Specifically, it aims to determine the training required to collect HRA data from non-experts (i.e., students) using Rancor Microworld and the differences in human performance measures between students and professional operators. A longitudinal experiment is conducted with sixteen undergraduate students, using four Rancor Microworld scenarios in each of the four experiment trials. The study considers four human performance measurements workload, situation awareness, time, and error. Finally, the trend of students' performance is compared with operator data collected from the previous experiment. Overall, this research complements previous studies by providing insights into how much training is required to collect HRA data from non-experts and the differences in human performance measures between students and professional operators.

99 GENERAL AND MISCELLANEOUS↗

Density estimation via measure transport: Outlook for applications in the biological sciences

Abstract One among several advantages of measure transport methods is that they allow or a unified framework for processing and analysis of data distributed according to a wide class of probability measures. Within this context, we present results from computational studies aimed at assessing the potential of measure transport techniques, specifically, the use of triangular transport maps, as part of a workflow intended to support research in the biological sciences. Scenarios characterized by the availability of limited amount of sample data, which are common in domains such as radiation biology, are of particular interest. We find that when estimating a distribution density function given limited amount of sample data, adaptive transport maps are advantageous. In particular, statistics gathered from computing series of adaptive transport maps, trained on a series of randomly chosen subsets of the set of available data samples, leads to uncovering information hidden in the data. As a result, in the radiation biology application considered here, this approach provides a tool for generating hypotheses about gene relationships and their dynamics under radiation exposure.

gene expression data↗

pop-cosmos : redshifts and physical properties of KiDS-1000 galaxies

ABSTRACT Principled Bayesian inference of galaxy properties has not previously been performed for wide-area weak-lensing surveys with millions of sources. We address this gap by applying the pop-cosmos generative model to perform spectral energy distribution (SED) fitting for 4 million KiDS (Kilo-Degree Survey)-1000 galaxies. Calibrated on deep COSMOS2020 photometric data, pop-cosmos specifies a physically motivated prior over the galaxy population up to $z \simeq 6$ in stellar population synthesis (SPS) parameter space. Using the Speculator SPS emulator with GPU (graphics processing unit)-accelerated Markov Chain Monte Carlo sampling, we perform full posterior inference at 8.2 GPU seconds per galaxy, obtaining joint constraints on galaxy redshifts and physical properties. We validate photometric redshifts against $\sim \!185\,\!000$ KiDS galaxies cross-matched to Dark Energy Spectroscopic Instrument Data Release 1 spectroscopic samples, achieving low bias ($2\times 10^{-3}$), scatter ($\sigma _{\mathrm{MAD}}=0.03$), and outlier fraction (3.2 per cent) for the Bright Galaxy Survey, with comparable performance (bias $3\times 10^{-2}$, $\sigma _{\mathrm{MAD}}=0.05$, 1.0 per cent outliers) for luminous red galaxies (LRGs). Within the LRG sample, we identify massive, dusty, star-forming contaminants at $z \simeq 0.4$ satisfying standard colour selections for quenched populations. We infer trends in stellar mass, star formation, metallicity, and dust across five tomographic redshift bins consistent with established scaling relations. Using specific star formation rate constraints, we identify $\sim$7 per cent of KiDS-1000 galaxies as quenched, versus 37 per cent implied by conservative colour cuts. This enables the construction of weak-lensing samples defined by physical properties while mitigating intrinsic alignment systematics and preserving statistical power. Our analysis validates pop-cosmos out of sample, establishing it as a scalable approach for galaxy evolution and cosmological analyses with photometric surveys.

Halder, Anik [Institute of Astronomy and Kavli Ins↗