Water – Polysaccharide Interactions in the Primary Cell Wall of Arabidopsis thaliana from Polarization Transfer Solid-State NMR
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biofuels (including algae and biomass), bio-inspir↗
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Conversion of CO2 on a highly active and stable Cu/FeOx/CeO2 catalyst: tuning catalytic performance by oxide-oxide interactions
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99 GENERAL AND MISCELLANEOUS↗
Hypersonic Fluid-Structure Interactions on a Slender Cone.
Abstract not provided.
Casper, Katya Marie↗
Neutrino self-interactions: A white paper
Neutrinos are the Standard Model (SM) particles which we understand the least, often due to how weakly they interact with the other SM particles. Beyond this, very little is known about interactions among the neutrinos, i.e., their self-interactions. The SM predicts neutrino self-interactions at a level beyond any current experimental capabilities, leaving open the possibility for beyond-the-SM interactions across many energy scales. In this white paper, we review the current knowledge of neutrino self-interactions from a vast array of probes, from cosmology, to astrophysics, to the laboratory. Furthermore, we also discuss theoretical motivations for such self-interactions, including neutrino masses and possible connections to dark matter. Looking forward, we discuss the capabilities of searches in the next generation and beyond, highlighting the possibility of future discovery of this beyond-the-SM physics.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
On specular reflectivity measurements in high and low-contrast relativistic laser-plasma interactions
Using both experiment and 2D3V particle-in-cell (PIC) simulations, we describe the use of specular reflectivity measurements to study relativistic (Iλ{sup 2 }> 10{sup 18 }W/cm{sup 2}⋅μm{sup 2}) laser-plasma interactions for both high and low-contrast 527 nm laser pulses on initially solid density aluminum targets. In the context of hot-electron generation, studies typically rely on diagnostics which, more-often-than-not, represent indirect processes driven by fast electrons transiting through solid density materials. Specular reflectivity measurements, however, can provide a direct measure of the interaction that is highly sensitive to how the EM fields and plasma profiles, critical input parameters for modeling of hot-electron generation, evolve near the interaction region. While the fields of interest occur near the relativistic critical electron density, experimental reflectivity measurements are obtained centimeters away from the interaction region, well after diffraction has fully manifested itself. Using a combination of PIC simulations with experimentally inspired conditions and an analytic, non-paraxial, pulse propagation algorithm, we calculate reflected pulse properties, both near and far from the interaction region, and compare with specular reflectivity measurements. The experiment results and PIC simulations demonstrate that specular reflectivity measurements are an extremely sensitive qualitative, and partially quantitative, indicator of initial laser/target conditions, ionization effects, and other details of intense laser-matter interactions. The techniques described can provide strong constraints on many systems of importance in ultra-intense laser interactions with matter.
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
The Role of Radiative Interactions in Tropical Cyclone Development under Realistic Boundary Conditions
Abstract The impact of radiative interactions on tropical cyclone (TC) climatology is investigated using a global, TC-permitting general circulation model (GCM) with realistic boundary conditions. In this model, synoptic-scale radiative interactions are suppressed by overwriting the model-generated atmospheric radiative cooling rates with their monthly varying climatological values. When radiative interactions are suppressed, the global TC frequency is significantly reduced, indicating that radiative interactions are a critical component of TC development even in the presence of spatially varying boundary conditions. The reduced TC activity is primarily due to a decrease in the frequency of pre-TC synoptic disturbances (“seeds”), whereas the likelihood that the seeds undergo cyclogenesis is less affected. When radiative interactions are suppressed, TC genesis shifts toward coastal regions, whereas TC lysis locations stay almost unchanged; together the distance between genesis and lysis is shortened, reducing TC duration. In a warmer climate, the magnitude of TC reduction from suppressing radiative interactions is diminished due to the larger contribution from latent heat release with increased sea surface temperatures. These results highlight the importance of radiative interactions in modulating the frequency and duration of TCs.
Meteorology & Atmospheric Sciences↗
Reevaluation of spin-dependent WIMP-proton interactions as an explanation of the DAMA data
We reexamine the interpretation of the annual modulation signal observed by the DAMA experiment as due to WIMPs with a spin-dependent coupling mostly to protons. We consider both axial-vector and pseudo-scalar couplings, and elastic as well as endothermic and exothermic inelastic scattering. We conclude that the DAMA signal is in strong tension with null results of other direct detection experiments, particularly PICASSO and KIMS.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
Roles of Intramolecular and Intermolecular Interactions in Functional Regulation of the Hsp70 J-protein Co-Chaperone Sis1
Unlike other Hsp70 molecular chaperones, those of the eukaryotic cytosol have four residues, EEVD, at heir C-termini. EEVD(Hsp70) binds adaptor proteins of the Hsp90 chaperone system and mitochondrial membrane preprotein receptors, thereby facilitating processing of Hsp70-bound clients through protein folding and translocation pathways. Among J-protein co-chaperones functioning in these pathways, Sis1 is unique, as it also binds the EEVD(Hsp70) motif. However, little is known about the role of the Sis1:EEVD(Hsp70) interaction. We found that deletion of EEVD(Hsp70) abolished the ability of Sis1, but not the ubiquitous J-protein Ydj1, to partner with Hsp70 in in vitro protein refolding. Sis1 co-chaperone activity with Hsp70ΔEEVD was restored upon substitution of a glutamic acid of the J-domain. Structural analysis revealed that this key glutamic acid, which is not present in Ydj1, forms a salt bridge with an arginine of the immediately adjacent glycine-rich region. Thus, restoration of Sis1 in vitro activity suggests that intramolecular interactions between the J-domain and glycine-rich region control co-chaperone activity, which is optimal only when Sis1 interacts with the EEVD(Hsp70) motif. However, we found that disruption of the Sis1:EEVD(Hsp70) interaction enhances the ability of Sis1 to substitute for Ydj1 in vivo. Our results are consistent with the idea that interaction of Sis1 with EEVD(Hsp70) minimizes transfer of Sis1-bound clients to Hsp70s that are primed for client transfer to folding and translocation pathways by their preassociation with EEVD binding adaptor proteins. These interactions may be one means by which cells triage Ydj1- and Sis1-bound clients to productive and quality control pathways, respectively.
Yu, Hyun Young↗
Reactivity descriptors in acid catalysis: acid strength, proton affinity and host–guest interactions
Brønsted acids mediate chemical transformations via proton transfer to bound species and interactions between the conjugate anion and bound cationic intermediates and transition states that are also stabilized by van der Waals forces within voids of molecular dimensions in inorganic hosts. This Feature Article describes the relevant descriptors of reactivity in terms of the properties of acids and molecules that determine their ability to donate and accept protons and to reorganize their respective charges to optimize their interactions at bound states. The deprotonation energy (DPE) of the acids and the protonation energy (Eprot) of the gaseous analogs of bound intermediates and transition states reflect their respective properties as species present at non-interacting distances. These properties accurately describe the reactivity of acids of a given type, such as polyoxometalates (POM) with a given type of addenda atom but different central atoms and heterosilicates, for different families of reactions. They do not fully capture, however, differences among acid types (e.g., Mo and W POM, heterosilicates, mineral acids) for diverse types of chemical transformations (e.g., elimination, isomerization, dimerization, condensation). The incompleteness of such descriptors reflects their inability to describe how protonated molecular species and conjugate anions restructure their respective charges when present as a binding pair at interacting distances. Such interaction energies represent electrostatic forces that depend on charge distributions in the cations and anions and the ability to reorganize the distributions to maximize the interactions. In the case of deprotonation, the electrostatic and charge reorganization components of DPE for various acids solely reflect the ability of the conjugate anion to accept and distribute the negative charge, a characteristic unique of each type of solid acid and specifically of the composition of its extended conjugate anion framework. The energy required to accept and rearrange the positive charge in bound intermediates and transition states reflects, in turn, their respective ability to recover the ionic and covalent components of DPE, the energy required to detach proton from conjugate anions. The DPE components and the recovery fractions together lead to a modified DPE, which captures only the part of DPE that remains unrecovered by the ion-pair interactions at bound intermediates and transition states, as the unifying descriptor for broad families of acids and reactions. The electrostatic and charge reorganization energies involved in these general descriptors are placed in historical context by assessing their connections to the heuristics of hard–soft acid–base displacements. Further development of these concepts requires benchmarking and extension of electrostatic and reorganization components of energies for a more diverse set of reaction types and acid families and advancement of methods for more efficient calculations of electrostatic interactions. Reactivity descriptors must also account for dispersive interactions between host cavities and guest molecules, requiring a framework analogous to the one described here for ion-pair interactions; these dispersive interactions depend on the fit between their shapes and sizes as well as their ‘‘structural stiffness’’ that determines the ability to modify the shapes of molecules and voids to minimize free energy. Entropy considerations and estimates of their dependence on properties of catalysts and molecules are also required for accurately determining Gibbs free energies that ultimately determine reaction rates.
Deshlahra, Prashant↗
Liquid-crystal mediated nanoparticle interactions and gel formation
Colloidal particles embedded within nematic liquid crystals exhibit strong anisotropic interactions arising from preferential orientation of nematogens near the particle surface. Such interactions are conducive to forming branched, gel-like aggregates. Anchoring effects also induce interactions between colloids dispersed in the isotropic liquid phase, through the interactions of the pre-nematic wetting layers. Here we utilize computer simulation using coarse-grained mesogens to perform a molecular-level calculation of the potential of mean force between two embedded nanoparticles as a function of anchoring for a set of solvent conditions straddling the isotropic–nematic transition. We observe that strong, nontrivial interactions can be induced between particles dispersed in mesogenic solvent, and explore how such interactions might be utilized to induce a gel state in the isotropic and nematic phases.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
Multi-time Schrödinger equations cannot contain interaction potentials
Multi-time wave functions are wave functions that have a time variable for every particle, such as ϕ(t{sub 1},x{sub 1},...,t{sub N},x{sub N}). They arise as a relativistic analog of the wave functions of quantum mechanics but can be applied also in quantum field theory. The evolution of a wave function with N time variables is governed by N Schrödinger equations, one for each time variable. These Schrödinger equations can be inconsistent with each other, i.e., they can fail to possess a joint solution for every initial condition; in fact, the N Hamiltonians need to satisfy a certain commutator condition in order to be consistent. While this condition is automatically satisfied for non-interacting particles, it is a challenge to set up consistent multi-time equations with interaction. We prove for a wide class of multi-time Schrödinger equations that the presence of interaction potentials (given by multiplication operators) leads to inconsistency. We conclude that interaction has to be implemented instead by creation and annihilation of particles, which, in fact, can be done consistently [S. Petrat and R. Tumulka, “Multi-time wave functions for quantum field theory,” Ann. Physics (to be published)]. We also prove the following result: When a cut-off length δ > 0 is introduced (in the sense that the multi-time wave function is defined only on a certain set of spacelike configurations, thereby breaking Lorentz invariance), then the multi-time Schrödinger equations with interaction potentials of range δ are consistent; however, in the desired limit δ → 0 of removing the cut-off, the resulting multi-time equations are interaction-free, which supports the conclusion expressed in the title.
71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
Interaction-induced transition in the quantum chaotic dynamics of a disordered metal
We demonstrate that a weakly disordered metal with short-range interactions exhibits a transition in the quantum chaotic dynamics when changing the temperature or the interaction strength. For weak interactions, the system displays exponential growth of the out-of-time-ordered correlator (OTOC) of the current operator. The Lyapunov exponent of this growth is temperature-independent in the limit of vanishing interaction. With increasing the temperature or the interaction strength, the system undergoes a transition to a non-chaotic behaviour, for which the exponential growth of the OTOC is absent. We conjecture that the transition manifests itself in the quasiparticle energy-level statistics and also discuss ways of its explicit observation in cold-atom setups.
71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
Supermassive Black Holes from Ultra Strongly Self Interacting Dark Matter
We consider the cosmological consequences if a small fraction (ƒ≲0.1) of the dark matter is ultra-strongly self-interacting, with an elastic self-interaction cross section per unit mass σ$\gg$1 cm 2 g -1 . This possibility evades all current constraints that assume that the self-interacting component makes up the majority of the dark matter. Nevertheless, even a small fraction of ultra-strongly self-interacting dark matter (uSIDM) can have observable consequences on astrophysical scales. In particular, the uSIDM subcomponent can undergo gravothermal collapse and form seed black holes in the center of a halo. These seed black holes, which form within several hundred halo interaction times, contain a few percent of the total uSIDM mass in the halo. For reasonable values of σƒ, these black holes can form at high enough redshifts to grow to ~10 9 M ⊙ quasars by z≳6, alleviating tension within the standard Λ cold dark matter cosmology. The ubiquitous formation of central black holes in halos could also create cores in dwarf galaxies by ejecting matter during binary black hole mergers, potentially resolving the “too big to fail” problem.
79 ASTRONOMY AND ASTROPHYSICS↗
Cosmic microwave background constraints on secret interactions among sterile neutrinos
Secret contact interactions among eV sterile neutrinos, mediated by a massive gauge boson X (with M X ≪ M W ), and characterized by a gauge coupling gX, have been proposed as a mean to reconcile cosmological observations and short-baseline laboratory anomalies. We constrain this scenario using the latest Planck data on Cosmic Microwave Background anisotropies, and measurements of baryon acoustic oscillations (BAO). We consistently include the effect of secret interactions on cosmological perturbations, namely the increased density and pressure fluctuations in the neutrino fluid, and still find a severe tension between the secret interaction framework and cosmology. In fact, taking into account neutrino scattering via secret interactions, we derive our own mass bound on sterile neutrinos and find (at 95 % CL) m s < 0.82 eV or m s < 0.29 eV from Planck alone or in combination with BAO, respectively. These limits confirm the discrepancy with the laboratory anomalies. Moreover, we constrain, in the limit of contact interaction, the effective strength G X to be < 2.8 (2.0) × 10 10 G F from Planck (Planck+BAO). This result, together with the mass bound, strongly disfavours the region with M X ~ 0.1 MeV and relatively large coupling g X ~ 10 -1 , previously indicated as a possible solution to the small scale dark matter problem.
79 ASTRONOMY AND ASTROPHYSICS↗
Predicting the Electric Field Effect on the Lateral Interactions Between Adsorbates: O/Fe(100) from First Principles
A density functional theory parameterized lattice gas cluster expansion of oxygen on an Fe(100) surface is developed in the presence and absence of an applied positive and negative external electric field, characterizing the heterogeneity in oxygen's surface distribution and the effect of an external electric field on the lateral interactions between the adsorbates. We show that the presence of a negative electric field tends to weaken both attractive and repulsive interactions while the positive electric field tends to strengthen these interactions, altering surface distributions and ground state configurations. Since lateral interactions have been shown to play a critical role in defining catalytic behavior, the application of an applied electric field has the potential to be a useful tool in adjusting critical chemical properties of Fe-based hydrodeoxygenation catalysts, by decreasing the repulsive interactions between the adspecies in the presence of a negative field and thereby mitigating the formation of an oxide.
Bray, Jacob E.↗
Identification of brain-specific angiogenesis inhibitor 2 as an interaction partner of glutaminase interacting protein
Highlights: {yields} Brain-specific angiogenesis inhibitor 2 (BAI2) is a new partner protein for GIP. {yields} BAI2 interaction with GIP was revealed by yeast two-hybrid assay. {yields} Binding of BAI2 to GIP was characterized by NMR, CD and fluorescence. {yields} BAI2 and GIP binding was mediated through the C-terminus of BAI2. -- Abstract: The vast majority of physiological processes in living cells are mediated by protein-protein interactions often specified by particular protein sequence motifs. PDZ domains, composed of 80-100 amino acid residues, are an important class of interaction motif. Among the PDZ-containing proteins, glutaminase interacting protein (GIP), also known as Tax Interacting Protein TIP-1, is unique in being composed almost exclusively of a single PDZ domain. GIP has important roles in cellular signaling, protein scaffolding and modulation of tumor growth and interacts with a number of physiological partner proteins, including Glutaminase L, {beta}-Catenin, FAS, HTLV-1 Tax, HPV16 E6, Rhotekin and Kir 2.3. To identify the network of proteins that interact with GIP, a human fetal brain cDNA library was screened using a yeast two-hybrid assay with GIP as bait. We identified brain-specific angiogenesis inhibitor 2 (BAI2), a member of the adhesion-G protein-coupled receptors (GPCRs), as a new partner of GIP. BAI2 is expressed primarily in neurons, further expanding GIP cellular functions. The interaction between GIP and the carboxy-terminus of BAI2 was characterized using fluorescence, circular dichroism (CD) and nuclear magnetic resonance (NMR) spectroscopy assays. These biophysical analyses support the interaction identified in the yeast two-hybrid assay. This is the first study reporting BAI2 as an interaction partner of GIP.
60 APPLIED LIFE SCIENCES↗
Investigation of Ion-Solvent Interactions in Nonaqueous Electrolytes Using in Situ Liquid SIMS
Ion-solvent interactions in non-aqueous electrolytes are of fundamental interest and practical importance, yet debates regarding ion preferential solvation and coordination numbers persist. In this work, in situ liquid SIMS was used to examine ion-solvent interactions in three representative electrolytes, i.e., lithium hexafluorophosphate (LiPF6) at 1.0 M in ethylene carbonate (EC)-dimethyl carbonate (DMC), and lithium bis(fluorosulfonyl)imide (LiFSI) at both low (1.0 M) and high (4.0 M) concentrations in 1,2-dimethoxyethane (DME). In the positive ion mode, solid molecular evidence strongly supports the preferential solvation of Li+ by EC. Besides, from the negative spectra, we also found that PF6- forms association with EC, which has been neglected by previous studies due to the relatively weak interaction. While in both LiFSI in DME electrolytes, no evidence shows that FSI- is associated with DME. Furthermore, strong salt ion cluster signals were observed in the 1.0 M LiPF6 in EC-DMC electrolyte, suggesting that a significant amount of Li+ ions stay in vicinity of anions. In sharp comparison, weak ion cluster signals were detected in dilute LiFSI in DME electrolyte, suggesting most ions are well separated, in agreement with our molecular dynamics (MD) simulation results. These findings indicate that with virtues of little bias on detecting positive and negative ions and the capability of directly analyzing concentrated electrolytes, in situ liquid SIMS is a powerful tool that can provide key evidence for improved understanding on the ion-solvent interactions in non-aqueous electrolytes. Therefore, we anticipate wide applications of in situ liquid SIMS on investigations of various ion-solvent interactions in the near future.
Zhang, Yanyan↗
Ab Initio Study of Molecular Interactions in Cellulose Iα
Biomass recalcitrance, the resistance of cellulosic biomass to degradation, is due in part to the stability of the hydrogen bond network and stacking forces between the polysaccharide chains in cellulose microfibers. In this paper, the fragment molecular orbital (FMO) method at the correlated Møller–Plesset second order perturbation level of theory was used on a model of the crystalline cellulose Iα core with a total of 144 glucose units. These computations show that the intersheet chain interactions are stronger than the intrasheet chain interactions for the crystalline structure, while they are more similar to each other for a relaxed structure. An FMO chain pair interaction energy decomposition analysis for both the crystal and relaxed structures reveals an intricate interplay between electrostatic, dispersion, charge transfer, and exchange repulsion effects. The role of the primary alcohol groups in stabilizing the interchain hydrogen bond network in the inner sheet of the crystal and relaxed structures of cellulose Iα, where edge effects are absent, was analyzed. Finally, the maximum attractive intrasheet interaction is observed for the GT-TG residue pair with one intrasheet hydrogen bond, suggesting that the relative orientation of the residues is as important as the hydrogen bond network in strengthening the interaction between the residues.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗