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At least 73 records · Page 4

The Evolution of Tropical Precipitation Patterns During ENSO Events Using 21+ Years of GPCP Merged Data

The ENSO phenomenon is characterized by fluctuations in the climate system of the tropical Pacific. Quantifying changes in the precipitation component of this system is important in understanding the distribution of heating in the atmosphere which drives the large-scale circulation and affects the weather patterns in the mid-latitudes. Monitoring precipitation anomalies in the Pacific is also an important component for tracking the evolution of ENSO. The most timely and complete observations of the earth come from satellite instruments. In this study, the state of the art satellite-gauge merged monthly precipitation data set from the Global Precipitation Climatology Project (GPCP) is used to depict tropical rainfall patterns during ENSO events over the past two decades and quantify these patterns using indices. This analysis will be complemented by daily precipitation data which can resolve the Madden-Julian Oscillation and westerly wind burst events. The 1997-98 El Nino and 1998-2000 La Nina were the best observed ENSO cycle in the historic record. Prior to the El Nino (in terms of anomalous warming of the east Pacific) dry anomalies over the Maritime Continent were observed in February 1997 as a westerly wind burst advected convection to the east. The largest SST anomalies occurred around November-December 1997, which were followed by the largest precipitation anomalies in the beginning of 1998. The largest precipitation departures from normal were not colocated with the SST anomalies, but were further west, In the spring of 1998 negative precipitation anomalies to the north of the equator intensified, signaling the mature phase of the El Nino. A rapid increase in the precipitation-based La Nina index from December-January 1998 to March-April 1998 signaled the coming La Nina. The 1982-1983 El Nino was comparable in strength (according to several indices) and the precipitation patterns evolved in a similar fashion. For the 1998-2000 La Nina, the coldest anomalies, were confined to the central equatorial Pacific, while the driest anomalies were found in the west Pacific,

Curtis, Scott↗

Adaptation, plant evolution, and the fossil record

The importance of adaptation in determining patterns of evolution has become an important focus of debate in evolutionary biology. As it pertains to paleobotany, the issue is whether or not adaptive evolution mediated by natural selection is sufficient to explain the stratigraphic distributions of taxa and character states observed in the plant fossil record. One means of addressing this question is the functional evaluation of stratigraphic series of plant organs set in the context of paleoenvironmental change and temporal patterns of floral composition within environments. For certain organ systems, quantitative estimates of biophysical performance can be made on the basis of structures preserved in the fossil record. Performance estimates for plants separated in time or space can be compared directly. Implicit in different hypotheses of the forces that shape the evolutionary record (e.g. adaptation, mass extinction, rapid environmental change, chance) are predictions about stratigraphic and paleoenvironmental trends in the efficacy of functional performance. Existing data suggest that following the evolution of a significant structural innovation, adaptation for improved functional performance can be a major determinant of evolutionary changes in plants; however, there are structural and development limits to functional improvement, and once these are reached, the structure in question may no longer figure strongly in selection until and unless a new innovation evolves. The Silurian-Devonian paleobotanical record is consistent with the hypothesis that the succession of lowland floodplain dominants preserved in the fossil record of this interval was determined principally by the repeated evolution of new taxa that rose to ecological importance because of competitive advantages conferred by improved biophysical performance. This does not seem to be equally true for Carboniferous-Jurassic dominants of swamp and lowland floodplain environments. In these cases, environmental disruption appears to have been a major factor in shaping the fossil record. This does not mean that continuing adaptation was not important during this interval, but it may indicate that adaptive evolution was strongest in environments other than those best represented in the paleobotanical record.

NASA Discipline Exobiology↗

Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs

Frogs are an ecologically diverse and phylogenetically ancient group of anuran amphibians that include important vertebrate cell and developmental model systems, notably the genus Xenopus. Here we report a high-quality reference genome sequence for the western clawed frog, Xenopus tropicalis, along with draft chromosome-scale sequences of three distantly related emerging model frog species, Eleutherodactylus coqui, Engystomops pustulosus, and Hymenochirus boettgeri. Frog chromosomes have remained remarkably stable since the Mesozoic Era, with limited Robertsonian (i.e., arm-preserving) translocations and end-to-end fusions found among the smaller chromosomes. Conservation of synteny includes conservation of centromere locations, marked by centromeric tandem repeats associated with Cenp-a binding surrounded by pericentromeric LINE/L1 elements. This work explores the structure of chromosomes across frogs, using a dense meiotic linkage map for X. tropicalis and chromatin conformation capture (Hi-C) data for all species. Abundant satellite repeats occupy the unusually long (~20 megabase) terminal regions of each chromosome that coincide with high rates of recombination. Both embryonic and differentiated cells show reproducible associations of centromeric chromatin and of telomeres, reflecting a Rabl-like configuration. Our comparative analyses reveal 13 conserved ancestral anuran chromosomes from which contemporary frog genomes were constructed.

59 BASIC BIOLOGICAL SCIENCES↗

Time evolution of surface chlorophyll patterns from cross-spectrum analysis of satellite color images

The rate of decorrelation of surface chlorophyll patterns as a function of the time separation between pairs of images was determined from two sequences of CZCS images of the Pacific Ocean area adjacent to Vancouver Island, Canada; cloud-free subareas were selected that were common to several images separated in time by 1-17 days. Image pairs were subjected to two-dimensional autospectrum and cross-spectrum analysis in an array processor, and squared coherence estimates found for several wave bands were plotted against time separation, in analogy with a time-lagged cross correlation function. It was found that, for wavelengths of 50-150 km, significant coherence was lost after 7-10 days, while for wavelengths of 25-50 km, significant coherence was lost after only 5-7 days. In both cases, offshore regions maintained coherence longer than coastal regions.

Denman, Kenneth L.↗

Square patterns and secondary instabilities in driven capillary waves

Amplitude equations (including nonlinear damping terms) are derived which describe the evolution of patterns in large-aspect-ratio driven capillary wave experiments. For drive strength just above threshold, a reduction of the number of marginal modes (from traveling capillary waves to standing waves) leads to simpler amplitude equations, which have a Lyapunov functional. This functional determines the wavenumber and symmetry (square) of the most stable uniform state. The original amplitude equations, however, have a secondary instability to transverse amplitude modulation (TAM), which is not present in the standing-wave equations. The TAM instability announces the restoration of the full set of marginal modes.

Milner, S. T.↗

Evolution of Dendritic Extended 3D Patterns during Directional Solidification: Microgravity Experiments in DECLIC-DSI onboard ISS and Phase-field Modeling

To characterize the dynamical formation of three-dimensional (3D) arrays of dendrites under diffusive growth conditions, in situ monitoring of a series of experiments on a transparent succinonitrile – 0.46 wt% camphor model alloy was carried out under low gravity in the DECLIC Directional Solidification Insert onboard the International Space Station. These experiments offer continuous interface observation and enable the construction of space-time evolution maps of dendrite location and primary spacing during directional solidification. We present the evolution of dendritic extended 3D patterns for a large range of parameters displaying different levels of side branching in both experiments and phase-field simulations. The combined and separate effects of macroscopic interface curvature and crystal mis-orientation are evidenced and detailed. In addition, the aligned dendritic array caused by the invasion of dendrites formed at the edge of the crucible border is investigated.

Kaihua Ji↗

Shortwave feedbacks and El Nino-Southern Oscillation: Forced ocean coupled ocean-atmosphere experiments

Changes in tropical sea surface temperature (SST) can produce changes in cloudiness that modify incoming solar shortwave (SW) radiation, which in turn affects SST. The effects of this negative feedback on Pacific interannual variability are examined in forced ocean model and hybrid coupled ocean-atmosphere model simulations. Two empirical schemes are used to model the large-scale, low-frequency response of surface SW to SST anomalies. The first scheme attempts to account for the nonlocal nature of the atmospheric response to SST based patterns of covariability analyzed through singular value decomposition. In the observations the primary coupled mode of variability is composed of a SW anomaly in the central Pacific that covaries with anomalous SST in the eastern Pacific. This is applied in the model as a nonlocal feedback. The second scheme examines the effects of a purely local feedback with a spatially varying coefficient of magnitude chosen similar to the first scheme. In almost all cases the second scheme behaved similarly to the first, presumably because the correlation scale of SST is large enough for El Nino-Southern Oscillation (ENSO) dynamics that there is little sensitivity to the local approximation in the SW feedback. In simulations forced by time series of observed wind stress the SW feedback induced very minor SST damping. Results for a simpified heat budget analysis showed that while the SW feedback increased the local heat flux damping on SST, it also induced a mean shallowing of the mixed layer. The resulting changes in both the local mean vertical temperature gradient and the zonal velocity response to the wind stress acted to oppose the local heat flux damping effects. When the observed SW anomalies were applied to forced simulations, the simulated SST anomalies were modified as expected, and agreement with observed SST improved. In coupled simulations the SW feedbacks had greater impact than in the case of specified stress. The main effects were to decrease the magnitude of the warm and cold SST anomalies in the central Pacific, while leaving the pattern and evolution of ENSO anomalies essentially unchanged elsewhere. The SW feedbacks thus produce a modest improvement of the model ENSO SST pattern compared with observations, although they tended to shorten the period of the model ENSO cycle. Overall the results suggest that large-scale SW feedbacks are of quantitative importance to simulating some aspects of the ENSO cycle but are not critical to the overall occurrence of the phenomenon.

Waliser, Duane E.↗

Influence of liquid conductance on the temporal evolution of self-organization patterns in atmospheric pressure DC glow discharges

Abstract Self-Organized Patterns (SOPs) at plasma-liquid interface in atmospheric pressure plasma discharges refer to the formation of intricate and puzzling structures due to the interplay of electrodynamic and hydrodynamic processes. Studies conducted to date have shown that this phenomenon results in the formation of distinctive patterns such as circular ring, star, gear, dots, spikes, etc., and primarily depends on working gas, electrolyte type, gap distance, current, conductivity, etc. However, an adequate understanding of how these patterns change from one type to another is still not available. This study aims to elucidate the influence of initial liquid conductance ( σ i ) on the temporal evolution of SOPs in liquid-anode discharges. The discharge was generated in a pin-to-liquid anode configuration at a constant helium (He) flow rate of 500 sccm and DC applied voltage of 6 kV at a gap distance of 12 mm. Through the gradual increment of σ i from 1.8 μ S to 4820 μ S, we observe that the trend in the evolution of SOPS takes place as solid discs, spikes, dots, rings, double rings, and stars. The continuous formation of reactive species onto the liquid anode in all conductive solutions results in a decrease in pH, an increase in bulk liquid temperature, and an increase in total dissolved solutes, and these have been confirmed through experimental measurements. Observations using optical emission spectroscopy show that the electrons at the plasma-liquid interface participate in the reduction of cations followed by their excitation & ionization due to which electron density as well as emissions from excited species (mainly hydroxyl radicals & excited nitrogen) decrease with time. Our investigation provides experimental evidence on the presence of cations at the plasma-liquid interface required for SOP formation.

Physics↗

Time evolution of pulsed far-field patterns of GaAlAs phase-locked laser-diode arrays

The time evolution of pulsed far fields from commercially available gain-guided phase-locked arrays has been studied and compared to experimental results previously obtained by streak camera measurements, and to predictions of coupled-mode theories developed for index- and gain-guided arrays. Although phase locking is evident by 100 ps into the drive pulse, stable operation in a fixed superposition of array modes is not achieved until 1-2 ns after the drive pulse has stabilized.

Forrest, Kathrine A.↗

Helium bubble size effects on the surface morphological response of plasma-facing tungsten

Abstract We report a simulation study on the effects of helium (He) bubble size on the morphological evolution and pattern formation on the surface of tungsten used as a plasma-facing component (PFC) in nuclear fusion devices. We have carried out a systematic investigation based on self-consistent dynamical simulations of surface morphological evolution according to an atomistically-informed, 3D continuum-scale model that captures well the relevant length and time scales of surface nanostructure formation in PFC tungsten. The model accounts for PFC surface diffusion, driven by the biaxial compressive stress originating from the over-pressurized He bubbles in the near-surface region of PFC tungsten as a result of He plasma exposure, combined with the formation of self-interstitial atoms in tungsten that diffuse toward the PFC surface and the flux of surface adatoms generated as a result of surface vacancy-adatom pair formation upon He implantation; this transport of surface adatoms contributes to the anisotropic growth of surface nanostructural features due to the different rates of adatom diffusion along and across step edges of islands on the tungsten surface. Our detailed analysis reveals that varying the average He bubble size plays an important role in the PFC surface growth kinetics as well as the resulting surface topography. Specifically, we find that an increase in the He bubble size leads to a deceleration in the growth rate of the tungsten nanotendrils that emanate from the PFC surface. We also find that the separation distance between the resulting surface features increases with increasing He bubble size, as well as over time. This coarsening effect is a thermally activated process resulting in an accurate description of the temperature dependence of the average surface feature separation by an Arrhenius relation.

36 MATERIALS SCIENCE↗

Compositional patterning in irradiated alloys: Effective potentials and effective interfacial energy

Compositional patterning (CP) in binary alloys during energetic particle irradiation is studied using a kinetic model that considers two competing kinetic processes, a thermally activated one promoting macroscopic phase separation (MPS) of the concentration field c(r,t) and a forced one resulting in finite-range random atomic mixing. The forced mixing is modeled by a Gaussian relocation distribution with a characteristic distance R. A series of approximate kinetic models are introduced by expanding the mixing function into a series of n terms, thus replacing the non-local evaluations of the concentration field c(r'-r,t) by local derivatives of c(r,t). This approach makes it possible to obtain exact effective potentials and build steady-state diagrams for each order-n model. Phase field (PF) simulations using these order-n models reveal that near the onset of patterning, phase evolution is accurately described using an order-3 model, which changes smoothly from an extended Cahn-Hilliard free energy in the MPS regime to a one-mode Swift-Hohenberg functional in the CP regime. Deeper into the patterning regime, higher-order models are required to achieve convergence, yielding square-like concentration profiles characteristic of a strong segregation regime. These higher-order effective free energies are analogous to multimodal Swift-Hohenberg functionals. Here, a new definition for the effective interfacial energy is proposed in the CP regime, since the interfacial area is no longer an excess quantity in that regime, precluding the use of the standard thermodynamic definition of interfacial energy.

36 MATERIALS SCIENCE↗

Long-term evolution of a high-latitude active region

The decay phase of one of the largest active regions of solar cycle 22 that developed by the end of June 1987 is studied. Migration of the magnetic fields northward, poleward, and equatorward is shown to lead to the apparent rotation of the magnetic axis of the region. The sunspot motions and pattern of evolution of the magnetic fields noted provide evidence for the existence of a large-scale velocity field within the active region.

Marquette, William H.↗

Looking at A 0535+26 at Low Luminosities with NuSTAR

We report on two NuSTAR observations of the high-mass X-ray binary A 0535+26 taken toward the end of its normal 2015 outburst at very low 3-50 keV luminosities of approximately 1.4 times x 10 (sup 36) ergs per second and approximately 5 times x 10 (sup 35) ergs per second, which are complemented by nine Swift observations. The data clearly confirm indications seen in earlier data that the source's spectral shape softens as it becomes fainter. The smooth exponential rollover at high energies seen in the first observation evolves to a much more abrupt steepening of the spectrum at 20-30 keV. The continuum evolution can be nicely described with emission from a magnetized accretion column, modeled using the compmag model modified by an additional Gaussian emission component for the fainter observation. Between the two observations, the optical depth changes from 0.75 plus or minus 0.04 to 0.56 plus 0.01 (sup) minus 0.04 (sub), the electron temperature remains constant, and there is an indication that the column decreases in radius. Since the energy-resolved pulse profiles remain virtually unchanged in shape between the two observations, the emission properties of the accretion column reflect the same accretion regime. This conclusion is also confirmed by our result that the energy of the cyclotron resonant scattering feature (CRSF) at approximately 45 keV is independent of the luminosity, implying that the magnetic field in the region in which the observed radiation is produced is the same in both observations. Finally, we also constrain the evolution of the continuum parameters with the rotational phase of the neutron star. The width of the CRSF could only be constrained for the brighter observation. Based on Monte Carlo simulations of CRSF formation in single accretion columns, its pulse phase dependence supports a simplified fan beam emission pattern. The evolution of the CRSF width is very similar to that of the CRSF depth, which is, however, in disagreement with expectations.

Ballhausen, Ralf↗

Protoplast fusion in Bacillus species produces frequent, unbiased, genome-wide homologous recombination

Abstract In eukaryotes, fine-scale maps of meiotic recombination events have greatly advanced our understanding of the factors that affect genomic variation patterns and evolution of traits. However, in bacteria that lack natural systems for sexual reproduction, unbiased characterization of recombination landscapes has remained challenging due to variable rates of genetic exchange and influence of natural selection. Here, to overcome these limitations and to gain a genome-wide view on recombination, we crossed Bacillus strains with different genetic distances using protoplast fusion. The offspring displayed complex inheritance patterns with one of the parents consistently contributing the major part of the chromosome backbone and multiple unselected fragments originating from the second parent. Our results demonstrate that this bias was in part due to the action of restriction–modification systems, whereas genome features like GC content and local nucleotide identity did not affect distribution of recombination events around the chromosome. Furthermore, we found that recombination occurred uniformly across the genome without concentration into hotspots. Notably, our results show that species-level genetic distance did not affect genome-wide recombination. This study provides a new insight into the dynamics of recombination in bacteria and a platform for studying recombination patterns in diverse bacterial species.

59 BASIC BIOLOGICAL SCIENCES↗

Phase evolution of U-Zr system in a thermal cycling neutron diffraction experiment: as-cast U-35Zr and U-50Zr

Here, phase evolution of as-cast U-35 wt% Zr and U-50 wt% Zr alloys during thermal cycling (303–1073 K) was investigated using in-situ neutron diffraction. Analysis was performed using Rietveld crystal and microstructure refinements from time-of-flight neutron diffraction data, with a focus on evolution of lattice parameter, atom ordering, unit cell volume, and weight fractions during the thermal cycling. Disordered δ-UZr 2 and residual γ-(U,Zr) phase are retained in the field of δ of the U-Zr equilibrium phase diagram for the U-50Zr sample, and in the field between δ and α-U for the U-35Zr sample. The α phase that is present in the reported phase diagrams of U-Zr was not observed in the diffraction patterns. The evolutions of lattice parameter and unit cell volume of δ and γ are affected by both thermal expansion and chemistry.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Space-Time Characteristics of Rainfall Diurnal Variations

The space-time features of rainfall diurnal variation of precipitation are systematically investigated by using the Tropical Rainfall Measuring Mission (TRMM) precipitation products retrieved from TRMM microwave imager (TMI), precipitation radar (PR) and TMI/PR combined algorithms. Results demonstrate that diurnal variability of precipitation is obvious over tropical regions. The dominant feature of rainfall diurnal cycle over, ocean is that there is consistent rainfall peak in early morning, while there is a consistent rainfall peak in mid-late afternoon over land. The seasonal variation on intensity of rainfall diurnal cycle is clearly evidenced. Horizontal distributions of rainfall diurnal variations indicate that there is a clearly early-morning peak with a secondary peak in the middle-late afternoon in ocean rainfall at latitudes dominated by large-scale convergence and deep convection. There is also an analogous early-morning peak in land rainfall along with a stronger afternoon peak forced by surface heating. Amplitude analysis shows that the patterns and its evolution of rainfall diurnal cycle are very close to rainfall distribution pattern and its evolution. These results indicate that rainfall diurnal variations are strongly associated with large-scale convective systems and climate weather systems. Phase studies clearly present the regional and seasonal features of rainfall diurnal activities. Further studies on convective and stratiform rainfall show different characteristics of diurnal cycles. Their spatial and temporal variations of convective and stratiform rainfall indicate that mechanisms for rainfall diurnal variations vary with time and space.

Yang, Song↗

Early Precambrian crustal evolution of south India

The Early Precambrian sequence in Karnataka, South India provides evidences for a distinct trend of evolution which differs from trends exhibited in many other Early Precambrian regions of the world. The supracrustal rock associations preserved in greenstone belts and as inclusions in gneisses and granulites suggest the evolution of the terrain from a stable to a mobile regime. The stable regime is represented by (1) layered ultramafic-mafic complexes, (2) orthoquartzite-basalt-rhyodacite-iron formation, and (30 ortho-quartzite-carbonate-Mn-Fe formation. The mobile regime, which can be shown on sedimentological grounds to have succeeded the stable regime, witnessed the accumulation of a greywacke-pillow basalt-dacite-rhyolite-iron formation association. Detrital sediments of the stable zone accumulated dominantly in fluvial environment and the associated volcanics are ubaerial. The volcanics of the stable regime are tholeiites derived from a zirconium and LREE-enriched sources. The greywackes of the mobile regime are turbidities, and the volcanic rocks possess continental margin (island-arc or back-arc) affinity; they show a LREE depleted to slightly LREE-enriched pattern. The evolution from a stable to a mobile regime is in contrast to the trend seen in most other regions of the world, where an early dominantly volcanic association of a mobile regime gives way upward in the sequence to sediments characteristic of a stable regime.

Srinivasan, R.↗