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At least 73 records · Page 4

Segmentation method comparison for residual fiber length measurement across tiled microscopy images

Fiber length distribution (FLD), in part, governs mechanical properties in discontinuous fiber composites, yet manual measurement methods limit the high-throughput characterization needed for materials design optimization. This study compares deep learning segmentation approaches for automated FLD measurement in large-field microscopy, evaluating how method choice affects the microstructural descriptors used in structure-property-processing relationships. A critical challenge is that high-resolution microscopy images (10,000×10,000 pixels) must be tiled for deep learning analysis, fragmenting fibers at boundaries. We demonstrate that segmentation method proves crucial for measurement accuracy. For example, instance segmentation with Slicing Aided Hyper Inference (SAHI) preserves individual fiber integrity across tiles while semantic segmentation prioritizes speed. Comparing against manual measurement of extracted carbon fibers, YOLOv11-SAHI matched manual ground truth (238 μm weighted mean) with 40x speedup (4.5 vs 167 minutes per image). U-Net provides rapid quantification although it is at the cost of reduced accuracy due only reliably measuring stand-alone fibers. Our comparative analysis reveals that instance segmentation with SAHI better preserves length measurements while semantic segmentation prioritizes speed, providing empirical guidance for method selection. The characterization provides essential inputs for mechanical property prediction models and inverse design workflows, accelerating composite materials development cycles.

Additive manufacturing

Experimental Verification of Dispersed Fringe Sensing as a Segment Phasing Technique using the Keck Telescope

Dispersed fringe sensing (DFS) is an efficient and robust method for coarse phasing of segmented primary mirrors (from one quarter of a wavelength to as much as the depth of focus of a single segment, typically several tens of microns). Unlike phasing techniques currently used for ground-based segmented telescopes, DFS does not require the use of edge sensors in order to sense changes in the relative heights of adjacent segments; this makes it particularly well suited for phasing of space-borne segmented telescopes, such as the James Webb Space Telescope. We validate DFS by using it to measure the piston errors of the segments of one of the Keck telescopes. The results agree with those of the Shack-Hartmann-based phasing scheme currently in use at Keck to within 2% over a range of initial piston errors of +/-16 (mu)m.

algorithm

How to Calibrate Edge Sensors on Segmented Mirror Telescopes

The next generation of large ground based telescopes use segmented mirrors. Sensors mounted on the edge of the segments measure the relative heights of the segments. The segments are actively controlled in height by three actuators per segment, but lateral motion is only passively constrained. Thus there will be some small change in the gap and shear between segments as changing telescope orientation and temperature make small distortions in the telescope structure. These "in-plane" motions place an additional performance burden on the edge sensors, and on the precision with which they must be mounted relative to the optical surface. In addition, both the scaling and offset of sensor edge height readings also vary with changes in gap.

segmented mirrors

1D-Convolutional Neural Network Architecture for Generalized Time-Segmentation Tasks

Time segmentation of experimental data is a common and often difficult task. Consequently, it is of interest to automate this type of segmentation to reduce manual inputs, which are labor intensive and less consistent. However, simple thresholding algorithms are often insufficiently robust due either to noise or inconsistent data. This paper proposes a simple 1D CNN architecture as a generalized solution for typical time segmentation tasks. The layer architecture, training methods, and methods for simple customization are described as well as the results of application to three separate arc jet data streams: facility condition segmentation, video highlight segmentation, and calorimeter time-series segmentation.

Machine learning

1d-Convolutional Neural Network Architecture for Generalized Time-Segmentation Tasks

Time segmentation of experimental data is a common and often difficult task. Consequently, it is of interest to automate this type of segmentation to reduce manual inputs, which are labor intensive and less consistent. However, simple thresholding algorithms are often insufficiently robust due either to noise or inconsistent data. This paper proposes a simple 1D CNN architecture as a generalized solution for typical time segmentation tasks. The layer architecture, training methods, and methods for simple customization are described as well as the results of application to three separate arc jet data streams: facility condition segmentation, video highlight segmentation, and calorimeter time-series segmentation.

Machine learning

1D-Convolutional Neural Network Architecture for Generalized Time-Segmentation Tasks

Time segmentation of experimental data is a common and often difficult task. Consequently, it is of interest to automate this type of segmentation to reduce manual inputs, which are labor intensive and less consistent. However, simple thresholding algorithms are often insufficiently robust due either to noise or inconsistent data. This paper proposes a simple 1D convolutional neural net (CNN) architecture as a generalized solution for typical time segmentation tasks. The layer architecture, training methods, and methods for simple customization are described as well as the results of application to three separate arc jet data streams: facility condition segmentation, video highlight segmentation, and calorimeter time-series segmentation.

Machine learning

1D-Convolutional Neural Network Architecture for Generalized Time-series Segmentation

Time segmentation of experimental data is a common and often difficult task. Consequently, it is of interest to automate this type of segmentation to reduce manual inputs, which are labor intensive and less consistent. However, simple thresholding algorithms are often insufficiently robust due either to noise or inconsistent data. This paper proposes a simple 1D convolutional neural net (CNN) architecture as a generalized solution for typical time segmentation tasks. The layer architecture, training methods, and methods for simple customization will be described as well as the results of application to three separate data streams: facility condition segmentation, video highlight segmentation, and calorimeter time-series segmentation. In all three test cases the 1D-CNN performs better than tailored integral/derivative/thresholding algorithms across a range of signal-to-noise levels.

CNN

1D-Convolutional Neural Network Architecture for Generalized Time-series Segmentation

Time segmentation of experimental data is a common and often difficult task. Consequently, it is of interest to automate this type of segmentation to reduce manual inputs, which are labor intensive and less consistent. However, simple thresholding algorithms are often insufficiently robust due either to noise or inconsistent data. This paper proposes a simple 1D convolutional neural net (CNN) architecture as a generalized solution for typical time segmentation tasks. The layer architecture, training methods, and methods for simple customization will be described as well as the results of application to three separate data streams: facility condition segmentation, video highlight segmentation, and calorimeter time-series segmentation. In all three test cases the 1D-CNN performs better than tailored integral/derivative/thresholding algorithms across a range of signal-to-noise levels.

CNN

Optimizing inference of segmentation on high-resolution images in MLExchange

MLExchange is a machine learning (ML) operations platform providing web user-interfaces (UIs) for data visualization and analysis pipelines at synchrotron facilities. Among these UIs is the segmentation app which helps synchrotron users utilize ML algorithms to automatically segment high-resolution scientific images with minimal manual annotation effort. In this work, we share code optimizations that significantly speed up the segmentation inference workflow of large data in short time. By optimizing the sequence of CPU-GPU data transfers and introducing CPU parallelization to key operations, we improve the per-device, per-image frame computational efficiency and observe close to 3×$$\times$$ speedup over the original segmentation inference workflow run time when utilizing a single GPU. Further adaptations enabling multi-GPU inference yield more than 40×$$\times$$ speedup with 100 GPUs compared to the optimized single GPU inference workflow. This acceleration of the segmentation inference workflow will provide MLExchange users with easy access to segmentation results with little wait time.

Lu, Shizhao

SwinCell: a 3D transformer and flow-based framework for improved cell segmentation

Segmentation of three-dimensional (3D) cellular images is fundamental for studying and understanding cell structure and function. However, 3D cellular segmentation is challenging, particularly for dense cells and tissues. This challenge arises mainly from the complex contextual information within 3D images, anisotropic properties, and the sensitivity to internal cellular structures, which often lead to incorrect segmentation. In this work, we introduce SwinCell, a 3D transformer-based framework that leverages Swin-transformer to predict flow and differentiate individual cell instances. We demonstrate SwinCell’s utility in the segmentation of nuclei, colon tissue cells, and densely cultured cells. SwinCell strikes a balance between maintaining detailed local feature recognition and understanding broader contextual information. Through extensive testing with both public and in-house 3D cell imaging datasets, SwinCell shows utility in segmenting dense cells, making it a valuable tool for 3D segmentation in cellular analysis that could expedite research in cell biology and tissue engineering.

59 BASIC BIOLOGICAL SCIENCES

MultiTaskDeltaNet: change detection-based image segmentation for operando ETEM with application to carbon gasification kinetics

Transforming in situ transmission electron microscopy (TEM) imaging into a tool for spatially-resolved operando characterization of solid-state reactions requires automated, high-precision semantic segmentation of dynamically evolving features. However, traditional deep learning methods for semantic segmentation often face limitations due to the scarcity of labeled data, visually ambiguous features of interest, and scenarios involving small objects. To tackle these challenges, we introduce MultiTaskDeltaNet (MTDN), a novel deep learning architecture that creatively reconceptualizes the segmentation task as a change detection problem. By implementing a unique Siamese network with a U-Net backbone and using paired images to capture feature changes, MTDN effectively leverages minimal data to produce high-quality segmentations. Furthermore, MTDN utilizes a multi-task learning strategy to exploit correlations between physical features of interest. In an evaluation using data from in situ environmental TEM (ETEM) videos of filamentous carbon gasification, MTDN demonstrated a significant advantage over conventional segmentation models, particularly in accurately delineating fine structural features. Notably, MTDN achieved a 10.22% performance improvement over conventional segmentation models in predicting small and visually ambiguous physical features. This work bridges key gaps between deep learning and practical TEM image analysis, advancing automated characterization of nanomaterials in complex experimental settings.

08 HYDROGEN

Strain gauge ambiguity sensor for segmented mirror active optical system

A system is described to measure alignment between interfacing edges of mirror segments positioned to form a segmented mirror surface. It serves as a gauge having a bending beam with four piezoresistive elements coupled across the interfaces of the edges of adjacent mirror segments. The bending beam has a first position corresponding to alignment of the edges of adjacent mirror segments, and it is bendable from the first position in a direction and to a degree dependent upon the relative misalignment between the edges of adjacent mirror segments to correspondingly vary the resistance of the strain guage. A source of power and an amplifier are connected in circuit with the strain gauge whereby the output of the amplifier varies according to the misalignment of the edges of adjacent mirror segments.

Wyman, C. L.

An evaluation of circumferentially segmented duct liners

An evaluation of circumferentially segmented duct linings are performed by comparing attenuations of optimized segmented and uniform linings for a range of frequencies and source structures. Broadband suppression and the effects of changes to input modal structure are explored in these comparisons. Credence in the theoretical model was obtained by comparing predictions to results of a carefully controlled experiment performed on the Spinning Mode Synthesizer facility at the NASA Langley Research Center. Excellent agreement was obtained in these comparisons. Predicted results show that the optimized segmented liner is more effective than the optimized uniform liner for the higher order spinning mode sources with a hard-wall/soft-wall admittance variation representing an optimum configuration for the segmented liner. Predicted results also indicate that the segmented linear gives better broadband performance and that its suppression characteristics are not particularly sensitive to changes in input modal structure when compared to that of the uniform lining. It is shown that the greatest suppression benefit of segmented linings occur near mode cuton frequencies and that these benefits are obtained despite reductions in the total amount of acoustic treatment of fifty percent or more.

Watson, W. R.

A hardware implementation of a relaxation algorithm to segment images

Relaxation labelling is a mathematical technique frequently applied in image processing algorithms. In particular, it is extensively used for the purpose of segmenting images. The paper presents a hardware implementation of a segmentation algorithm, for images consisting of two regions, based on relaxation labelling. The algorithm determines, for each pixel, the probability that it should be labelled as belonging to a particular region, for all regions in the image. The label probabilities (labellings) of every pixel are iteratively updated, based on those of the pixel's neighbors, until they converge. The pixel is then assigned to the region correspondent to the maximum label probability. The system consists of a control unit and of a pipeline of segmentation stages. Each segmentation stage emulates in the hardware an iteration of the relaxation algorithm. The design of the segmentation stage is based on commercially available digital signal processing integrated circuits. Multiple iterations are accomplished by stringing stages together or by looping the output of a stage, or string of stages, to its input. The system interfaces with a generic host computer. Given the modularity of the architecture, performance can be enhanced by merely adding segmentation stages.

Loda, Antonio G.

Segment alignment control system

The segmented primary mirror for the LDR will require a special segment alignment control system to precisely control the orientation of each of the segments so that the resulting composite reflector behaves like a monolith. The W.M. Keck Ten Meter Telescope will utilize a primary mirror made up of 36 actively controlled segments. Thus the primary mirror and its segment alignment control system are directly analogous to the LDR. The problems of controlling the segments in the face of disturbances and control/structures interaction, as analyzed for the TMT, are virtually identical to those for the LDR. The two systems are briefly compared.

Aubrun, JEAN-N.

A tool for interactive exploration of a hierarchical segmentation

Hierarchical segmentation is discussed as a form of region growing in which the sequence of merges is controlled by a 'best merge first' principle, and a record of the region merging sequence is often retained for later analysis. In the author's massively parallel implementation of hierarchical segmentation, which he calls iterative parallel region growing (IPRG), a set of directional edge maps are used to store the region merging sequence information. An iteractive tool is described that allows an analyst to fully explore a hierarchical segmentation, potentially producing an image segmentation that is a combination of segmentations produced at several different iterations of the IPRG algorithm. A potential method for automatically producing such segmentations is also discussed.

Tilton, James C.

Scene segmentation of natural images using texture measures and back-propagation

Knowledge of the three-dimensional world is essential for many guidance and navigation applications. A sequence of images from an electro-optical sensor can be processed using optical flow algorithms to provide a sparse set of ranges as a function of azimuth and elevation. A natural way to enhance the range map is by interpolation. However, this should be undertaken with care since interpolation assumes continuity of range. The range is continuous in certain parts of the image and can jump at object boundaries. In such situations, the ability to detect homogeneous object regions by scene segmentation can be used to determine regions in the range map that can be enhanced by interpolation. The use of scalar features derived from the spatial gray-level dependence matrix for texture segmentation is explored. Thresholding of histograms of scalar texture features is done for several images to select scalar features which result in a meaningful segmentation of the images. Next, the selected scalar features are used with a neural net to automate the segmentation procedure. Back-propagation is used to train the feed forward neural network. The generalization of the network approach to subsequent images in the sequence is examined. It is shown that the use of multiple scalar features as input to the neural network result in a superior segmentation when compared with a single scalar feature. It is also shown that the scalar features, which are not useful individually, result in a good segmentation when used together. The methodology is applied to both indoor and outdoor images.

Sridhar, Banavar

Phasing of a space based segmented submillimeter wavelength telescope using focal plane measurements

As part of a technology development program for realizing a space based submillimeter telescope, two different approaches to the absolute phasing of a segmented primary mirror using focal plane measurements have been implemented for feasibility. The method of optimization by simulated annealing evaluates the image quality of a point spread function after all the telescope segments have been randomly moved. It accepts each iteration which improves the image quality, as well as a random number of iterations which do not, thus keeping the Strehl in the initialization procedure from falling into local maxima. Methods for determining the annealing schedule, and the step size for random segment movements are presented and discussed. Using phase diversity and a model for the telescope imaging system, a nonlinear least squares algorithm has also been implemented which parameterizes each of the segment actuator movements. Using multiple out of focus images, the segment actuator positions are estimated using an iterative procedure. Nonlinear least squares, although computationally intensive, offers a large savings in the actuator movements over simulated annealing and pairwise phasing methods for large numbers of segments. These algorithms have been integrated into a general simulation program which models the behavior of the telescope under anticipated space conditions.

Levine, B. M.