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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
NASA NTRS2002

Outbursts In Symbiotic Binaries (FUSE 2000)

During the past year, we made good progress on analysis of FUSE observations of the symbiotic binary Z And. For background, Z And is a binary system composed of a red giant and a hot component of unknown status. The orbital period is roughly 750 days. The hot component undergoes large-scale eruptions every 10-20 yr. An outburst began several years ago, triggering this FUSE opportunity. First, we obtained an excellent set of ground-based optical data in support, of the FUSE observations. We used FAST, a high throughput low resolution spectrograph on the 1.5-m telescope at Mt. Hopkins, Arizona. A 300 g/ mm grating blazed at 4750 A, a 3 in. slit, and a thinned Loral 512 x 2688 CCD gave us spectra covering 3800-7500 A at a resolution of 6 A. The wavelength solution for each spectrum has a probable error of +/- 0.5 A or better. Most of the resulting spectra have moderate signal-to-noise, S/.N approx. greater than 30 per pixel. The time coverage for these spectra is excellent. Typically, we acquired spectra every 1-2 nights during dark runs at Mt. Hopkins. These data cover most of the rise and all of the decline of the recent outburst. The spectra show a wealth of emission lines, including H I, He I, He II, [Fe V11], and the Raman scattering bands at 6830 A and 7088 A. The Raman bands and other high ionization features vary considerably throughout the outburst. These features will enable us to correlate variations in the FUSE spectra with variations in the optical spectra. Second, we began an analysis of FUSE spectra of Z And. We have carefully examined the spectra, identifying real features and defects. We have identified and measured fluxes for all strong emission lines, including the O VI doublet at 1032 A and 1038 A. These and several other strong emission lines display pronounced P Cygni absorption components indicative of outgrowing gas. We will attempt to correlate these velocities with similar profiles observed on optical spectra. The line velocities - together with line variations - will yield physical parameters for the expanding shell of gas in the outer atmosphere of the hot component. We also worked on several diagnostic tools, including upgrades to photoionization programs developed by the PI and others. We plan to use these tools to derive electron densities and temperatures front intercombination and forbidden lines observed on optical and FUSE spectra. Preliminary results indicate a large electron density, n(sub e) is greater than or = 10(exp 10)/cc and a modest electron temperature, T(sub e) approx. 20,000 K. We see no evidence for shocked gas as observed in some other symbiotics. However, we have yet to include several important lines of [Fe VII] and [Ne V] in the analysis. Inclusion of these lines will yield an improved estimate of the electron temperature in the gas. Finally, we have one additional FUSE spectrum planned for acquisition during this cycle. These data will provide important information concerning the state of the system farther along in its decline. Once we have this spectrum in hand, we plan to complete our analysis and publish our results.

Kenyon, Scott J.↗
NASA NTRS2005

Simultaneous X-Ray and UV Spectroscopy of the Symbiotic HD 154791

Our program consisted of three observations of the symbiotic neutron stadred giant binary 4U 1700+24/HD154791. Using an earlier 2002 TOO observation made in response to a new transient X-ray outburst, we had previously discovered a redshifted O VII line and submitted a paper on this discovery to the journal Astronomy and Astrophysics. In these new observations, we from analysis of the 2002 TOO observation of the symbiotic neutron-star binary 4U 1700+24, made in response to detection of a new transient outburst, we discovered a redshifted Oxygen VIII line (in collaboration with A. Tiengo of UVA), and submitted a paper on this result to A&A. Analysis of the three subsequent observations has found a number of other features also due to ionized oxygen, which we have found to vary as the source transits from outburst to quiescence. A paper describing these observations is being prepared for submission to the Astrophysical Journal, led by Co-I Duncan Galloway.

Chakrabarty, Deepto↗
NASA NTRS2007

A Study of the Mass Loss Rates of Symbiotic Star Systems

The amount of mass loss in symbiotic systems is investigated, specifically mass loss via the formation of jets in R Aquarii (R Aqr). The jets in R Aqr have been observed in the X-ray by Chandra over a four year time period. The jet changes on times scales of a year and new outflows have been observed. Understanding the amount of mass and the frequency of ejection further constrain the ability of the white dwarf in the system to accrete enough mass to become a Type la supernova progenitor. The details of multi-wavelength studies, such as speed, density and spatial extent of the jets will be discussed in order to understand the mass balance in the binary system. We examine other symbiotic systems to determine trends in mass loss in this class of objects.

Korreck, K. E.↗
NASA NTRS2010

High-Resolution X-Ray Spectra of the Symbiotic Star SS73 17

SS73 17 was an innocuous Mira-type symbiotic star until the International Gamma-Ray Astrophysics Laboratory and Swift discovered its bright hard X-ray emission, adding it to the small class of "hard X-ray emitting symbiotics." Suzaku observations in 2006 then showed it emits three bright iron lines as well, with little to no emission in the 0.3-2.0 keV bandpass. We present here follow-up observations with the Chandra High Energy Transmission Grating and Suzaku that confirm the earlier detection of strong emission lines of Fe K(alpha) fluorescence, Fe XXV and Fe XXVI but also show significantly more soft X-ray emission. The high-resolution spectrum also shows emission lines of other highly ionized ions as Si xiv and possibly S XVI. In addition, a re-analysis of the 2006 Suzaku data using the latest calibration shows that the hard (15-50 keV) X-ray emission is brighter than previously thought and remains constant in both the 2006 and 2008 data. The G ratio calculated from the Fe xxv lines shows that these lines are thermal, not photoionized, in origin.With the exception of the hard X-ray emission, the spectra from both epochs can be fit using thermal radiation assuming a differential emission measure based on a cooling-flow model combined with a full and partial absorber. We show that acceptable fits can be obtained for all the data in the 1-10 keV band varying only the partial absorber. Based on the temperature and accretion rate, the thermal emission appears to be arising from the boundary layer between the accreting white dwarf and the accretion disk.

Eze, R. N. C.↗
NASA NTRS2011

The 5 Hour Pulse Period and Broadband Spectrum of the Symbiotic X-Ray Binary 3A 1954+319

We present an analysis of the highly variable accreting X-ray pulsar 3A 1954+319 using 2005-2009 monitoring data obtained with INTEGRAL and Swift. This considerably extends the pulse period history and covers flaring episodes in 2005 and 2008. In 2006 the source was identified as one of only a few known symbiotic X-ray binaries, Le" systems composed of a neutron star accreting from the inhomogeneous medium around an M-giant star. The extremely long pulse period of approximately 5.3 h is directly visible in the 2008 INTEGRAL-ISGRI outburst light curve. The pulse profile is double peaked and not significantly energy dependent. During the outburst a strong spin-up of -1.8 x 10(exp -4) h h(exp -1) occurred. Between 2005 and 2008 a long term spin-down trend of 2.1 x 10(exp -5) h h(exp -1) was observed for the first time for this source. The 3-80 keV pulse peak spectrum of 3A 1954+319 during the 2008 flare could be well described by a thermal Comptonization model. We interpret the results within the framework of a recently developed quasi-spherical accretion model for symbiotic X-ray binaries.

Marcu, Diana M.↗
NASA NTRS2014

Spectral and Timing Nature of the Symbiotic X-Ray Binary 4U 1954+319: The Slowest Rotating Neutron Star in AN X-Ray Binary System

The symbiotic X-ray binary (SyXB) 4U 1954+319 is a rare system hosting a peculiar neutron star (NS) and an M-type optical companion. Its approx. 5.4 hr NS spin period is the longest among all known accretion-powered pulsars and exhibited large (is approx. 7%) fluctuations over 8 yr. A spin trend transition was detected with Swift/BAT around an X-ray brightening in 2012. The source was in quiescent and bright states before and after this outburst based on 60 ks Suzaku observations in 2011 and 2012. The observed continuum is well described by a Comptonized model with the addition of a narrow 6.4 keV Fe-K alpha line during the outburst. Spectral similarities to slowly rotating pulsars in high-mass X-ray binaries, its high pulsed fraction (approx. 60%-80%), and the location in the Corbet diagram favor high B-field (approx. greater than 10(exp12) G) over a weak field as in low-mass X-ray binaries. The observed low X-ray luminosity (10(exp33)-10(exp35) erg s(exp−1)), probable wide orbit, and a slow stellar wind of this SyXB make quasi-spherical accretion in the subsonic settling regime a plausible model. Assuming a approx. 10(exp13) G NS, this scheme can explain the approx. 5.4 hr equilibrium rotation without employing the magnetar-like field (approx. 10(exp16) G) required in the disk accretion case. The timescales of multiple irregular flares (approx. 50 s) can also be attributed to the free-fall time from the Alfv´en shell for a approx. 10(exp13) G field. A physical interpretation of SyXBs beyond the canonical binary classifications is discussed.

accretion disks aEuro" binaries: symbiotic aEuro" ↗
NASA NTRS2020

Optical Spectroscopy and X-Ray Observations of the D-Type Symbiotic Star EF Aql

We performed high-resolution optical spectroscopy and X-ray observations of the recently identified Mira-type symbiotic star EF Aql. Based on high-resolution optical spectroscopy obtained with SALT, we determine the temperature (~55 000 K) and the luminosity (~5.3 L⨀) of the hot component in the system. The heliocentric radial velocities of the emission lines in the spectra reveal possible stratification of the chemical elements. We also estimate the mass-loss rate of the Mira donor star. Our Swift observation did not detect EF Aql in X-rays. The upper limit of the X-ray observations is 10(exp -12) erg cm(exp -2) s(exp -1), which means that EF Aql is consistent with the faintest X-ray systems detected so far. Otherwise, we detected it with the UVOT instrument with an average UVM2 magnitude of 14.05. During the exposure, EF Aql became approximately 0.2 UVM2 magnitudes fainter. The periodogram analysis of the V-band data reveals an improved period of 320.4±0.3 d caused by the pulsations of the Mira-type donor star. The spectra are available upon request from the authors.

Symbiotic binary stars↗
DOE OSTI2023

The evolution of symbiotic innovation, water, and agricultural supply chains

Abstract The water literature has mainly investigated the diversion and distribution of water from the source to the end users or the utilization of water at the farm level in crop production. This paper presents a supply chain perspective that links the innovation supply chain of water delivery and irrigation with the complete water supply chain to the crop and the crop supply chains. These supply chains are symbiotic. Changes in the demand for crops, agronomic technology, and knowledge about water will modify the water infrastructure, irrigation technology, land‐use and crop production patterns, and the pricing of water and related commodities. The parameters that guide investment in water innovation and the design of the water supply chain depend on political, economic, and technological considerations that have coevolved over time with water and crop systems. Evidence from California and elsewhere supports the findings of the paper.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

An algal-bacterial symbiotic system of carbon fixation using formate as a carbon source

The commercial implementation of algal cultures for efficient capture of CO 2 from fossil-derived flue gases is not a reality yet due to several major challenges, particularly low gas-liquid mass transport efficiency along with loss of productivity due to pests. This study has explored an algal-bacterial symbiotic system to utilize formate as a carbon source. The algal-bacterial assemblage, after a 400-day adaptive evolution using the formate medium, has demonstrated a new capability to assimilate both formate and CO 2 to promote biomass production. The formate tolerant culture system also addresses CO 2 mass transfer limitation under high light conditions. Continuous cultivation of the assemblage on formate led to a carbon capture efficiency of 90 % with a biomass concentration of 0.92 g L -1 and biomass productivity of 0.31 g L -1 day -1 , and the system did not require CO 2 aeration. In addition, 13 C isotope tracing, proteomics, and microbial community analysis reveal a uniquely evolved community for formate utilizations and robust biomass synthesis, in which Chlorella sorokiniana is a dominant phototroph companying with highly diverse bacterial subpopulations. In the presence of formate, evidence has shown that Chlorella is able to form mutualism with formate utilizing bacteria in semi-continuous cultures, leading to a highly effective photomixotrophic metabolism. Furthermore, this study demonstrates a new route of using electrochemical-derived formate to support mutualistic algae-bacteria biorefinery while the formate as an alternative carbon source could repel pests for outdoor algal cultivations.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

New species and records of the symbiotic shrimp genus Leptalpheus Williams, 1965, with notes on Fenneralpheus Felder & Manning, 1986, and preliminary molecular analysis of phylogenetic relationships (Crustacea: Decapoda: Alpheidae)

The shrimp genera Leptalpheus Williams, 1965 and Fenneralpheus Felder & Manning, 1986 are composed entirely of symbiotic species that co-inhabit burrows of infaunal macrocrustaceans. We report extensive collections of these genera from western Atlantic, eastern Pacific and Indo-West Pacific regions. Integrative taxonomy methods, including morphological comparisons and analysis of three mitochondrial genetic markers, are used to test species hypotheses and evolutionary relationships among members of these genera. Our molecular analysis failed to recover Leptalpheus or Fenneralpheus as monophyletic groups. Our results strongly supported the monophyly of three clades composed of species of Leptalpheus, loosely corresponding to previously proposed species groups. Three new species closely related to Leptalpheus forceps Williams, 1965, L. marginalis Anker, 2011, and L. mexicanus Ríos & Carvacho, 1983 are described. Leptalpheus ankeri n. sp., from the Caribbean Sea, Atlantic coast of Florida, and Gulf of Mexico, is a polymorphic species that exhibits two major cheliped morphotypes. Leptalpheus sibo n. sp., from the Pacific coast of Nicaragua, is morphologically very similar to L. ankeri n. sp., likely its transisthmian sister species, and shares its cheliped polymorphism. A reassessment of L. forceps concluded that records of this species from the Caribbean Sea and Brazil are not conspecific with L. forceps sensu stricto from the Atlantic coast of the USA and the Gulf of Mexico, and they are herein described as Leptalpheus degravei n. sp. Based on both molecular and morphological evidence, we found Leptalpheus bicristatus Anker, 2011 to be a junior synonym of L. mexicanus and Leptalpheus canterakintzi Anker & Lazarus, 2015 to be a junior synonym of Leptalpheus azuero Anker, 2011. First reports of Leptalpheus axianassae Dworschak & Coelho, 1999 in Texas and Mexico, Leptalpheus denticulatus Anker & Marin, 2009 in the Mariana Islands, Leptalpheus felderi Anker, Vera Caripe & Lira, 2006 and Leptalpheus lirai Vera Caripe, Pereda & Anker, 2021 in the USA, and Leptalpheus pereirai Anker & Vera Caripe, 2016 in Cuba are included.

Zoology↗
DOE OSTI2020

The Large-Eddy Simulation (LES) Atmospheric Radiation Measurement (ARM) Symbiotic Simulation and Observation (LASSO) Activity for Continental Shallow Convection

The U.S. Department of Energy’s Atmospheric Radiation Measurement (ARM) user facility recently initiated the Large-Eddy Simulation (LES) ARM Symbiotic Simulation and Observation (LASSO) activity focused on shallow convection at ARM’s Southern Great Plains (SGP) atmospheric observatory in Oklahoma. LASSO is designed to overcome an oft-shared difficulty of bridging the gap from point-based measurements to scales relevant for model parameterization development, and it provides an approach to add value to observations through modeling. LASSO is envisioned to be useful to modelers, theoreticians, and observationalists needing information relevant to cloud processes. LASSO does so by combining a suite of observations, LES inputs and outputs, diagnostics, and skill scores into data bundles that are freely available, and by simplifying user access to the data to speed scientific inquiry. The combination of relevant observations with observationally constrained LES output provides detail that gives context to the observations by showing physically consistent connections between processes based on the simulated state. A unique approach for LASSO is the generation of a library of cases for days with shallow convection combined with an ensemble of LES for each case. The library enables researchers to move beyond the single-case-study approach typical of LES research. The ensemble members are produced using a selection of different large-scale forcing sources and spatial scales. Since large-scale forcing is one of the most uncertain aspects of generating the LES, the ensemble informs users about potential uncertainty for each date and increases the probability of having an accurate forcing for each case.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium

Background - Nudibranchs comprise a group of > 6000 marine soft-bodied mollusk species known to use secondary metabolites (natural products) for chemical defense. The full diversity of these metabolites and whether symbiotic microbes are responsible for their synthesis remains unexplored. Another issue in searching for undiscovered natural products is that computational analysis of genomes of uncultured microbes can result in detection of novel biosynthetic gene clusters; however, their in vivo functionality is not guaranteed which limits further exploration of their pharmaceutical or industrial potential. To overcome these challenges, we used a fluorescent pantetheine probe, which produces a fluorescent CoA-analog employed in biosynthesis of secondary metabolites, to label and capture bacterial symbionts actively producing these compounds in the mantle of the nudibranch Doriopsilla fulva. Results - We recovered the genome of Candidatus Doriopsillibacter californiensis from the Ca. Tethybacterales order, an uncultured lineage of sponge symbionts not found in nudibranchs previously. It forms part of the core skin microbiome of D. fulva and is nearly absent in its internal organs. We showed that crude extracts of D. fulva contained secondary metabolites that were consistent with the presence of a beta-lactone encoded in Ca. D. californiensis genome. Beta-lactones represent an underexplored group of secondary metabolites with pharmaceutical potential that have not been reported in nudibranchs previously. Conclusions - Altogether, this study shows how probe-based, targeted sorting approaches can capture bacterial symbionts producing secondary metabolites in vivo.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Co-catabolism of arginine and succinate drives symbiotic nitrogen fixation

Biological nitrogen fixation emerging from the symbiosis between bacteria and crop plants holds promise to increase the sustainability of agriculture. One of the biggest hurdles for the engineering of nitrogen-fixing organisms is an incomplete knowledge of metabolic interactions between microbe and plant. In contrast to the previously assumed supply of only succinate, we describe here the CATCH-N cycle as a novel metabolic pathway that co-catabolizes plant provided arginine and succinate to drive the energy-demanding process of symbiotic nitrogen fixation in endosymbiotic rhizobia. Using systems biology, isotope labeling studies and transposon sequencing in conjunction with biochemical characterization, we uncovered highly redundant network components of the CATCH-N cycle including transaminases that interlink the co-catabolism of arginine and succinate. The CATCH-N cycle uses N2 as an additional sink for reductant and therefore delivers up to 25% higher yields of nitrogen than classical arginine catabolism—two alanines and three ammonium ions are secreted for each input of arginine and succinate. We argue that the CATCH-N cycle has evolved as part of a synergistic interaction to sustain bacterial metabolism in the microoxic and highly acid environment of symbiosomes. Thus, the CATCHN cycle entangles the metabolism of both partners to promote symbiosis. Our results provide a theoretical framework and metabolic blueprint for the rational design of plants and plant-associated organisms with new properties to improve nitrogen fixation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Discovery top-down proteomics in symbiotic soybean root nodules

Proteomic methods have been widely used to study proteins in complex biological samples to understand biological molecular mechanisms. Most well-established methods (known as bottom-up proteomics, BUP) employ an enzymatic digestion step to cleave intact proteins into smaller peptides for liquid chromatography (LC) mass spectrometry (MS) detection. In contrast, top-down proteomics (TDP) directly characterizes intact proteins including all possible post-translational modifications (PTMs), thus offering unique insights into proteoform biology where combinations of individual PTMs may play important roles. We performed TDP on soybean root nodules infected by the symbiotic Bradyrhizobium japonicum in both the wildtype bacterium and a nifH- mutant, which lacks the ability to fix nitrogen in the soybean root nodule. TDP captured 1648 proteoforms derived from 313 bacterial genes and 178 soybean genes. Leghemoglobin, the most abundant protein in the sample, existed in many truncated proteoforms. Interestingly, these truncated proteoforms were considerably more abundant in the wildtype relative to the nifH- mutant, implicating protease activity as an important factor in nitrogen fixation. Proteoforms with various PTMs and combinations thereof were identified using an unrestricted open modification search. This included less common PTMs such as myristoylation, palmitoylation, cyanylation, and sulfation. In parallel, we collected high resolution MS imaging (MSI) data of intact proteins and biopolymers (<20 kDa due to current technical limitations) from sections of the soybean root nodules using matrix-assisted laser desorption/ionization (MALDI) coupled to high resolution Orbitrap. Several detected proteoforms exhibited unique spatial distributions inside the infection zone and cortex, suggesting functional compartmentalization in these regions. A subset of peaks from the MALDI-MSI were assigned to proteoforms detected in TDP LCMS data based on matching accurate masses. Many of the proteins detected in both LCMS and MALDI-MSI are currently uncharacterized in UniProt: the PTM and spatial information presented here will be valuable in understanding their biological functions. Taken together, our study demonstrates how untargeted TDP approach can provide unique insights into plant proteoform biology. On-going technology developments are expected to further improve TDP coverage for more comprehensive high-throughput analysis of proteoforms.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

LES ARM Symbiotic Simulation and Observation Scenario for CACTI

The Large-Eddy Simulation (LES) Atmospheric Radiation Measurement (ARM) Symbiotic Simulation and Observation (LASSO) deep-convection scenario for the Cloud, Aerosol, and Complex Terrain Interactions (CACTI) field campaign. The LASSO-CACTI scenario consists of a library of mesoscale and LES simulations spanning grid spacings from 7.5 km to 100 m for convection near the Sierras de Córdoba mountain range, roughly centered on the ARM Mobile Facility. Supporting skill scores and observation comparisons complement the simulations in addition to subsets of the model output for various categories of model output variables. More information can be found at https://www.arm.gov/capabilities/modeling/lasso.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1979

Ultraviolet photometry from the Orbiting Astronomical Observatory. XXXIII - The symbiotic star AG Pegasi

Ultraviolet broadband photometry obtained with the Wisconsin Experiment Package on OAO 2 is presented for the symbiotic binary star AG Peg. The hot component of the binary is found to be a luminous ultraviolet source, with an energy distribution consistent with its WN6 optical spectral type. Total luminosities of 1000 and 17,000 suns are found for the hot star by assuming, respectively, that the giant primary of AG Peg is a normal M3 III star and that it fills its Roche lobe. The eruptive behavior of AG Peg is shown to require the higher luminosity, and the activity in AG Peg is discussed in terms of a very slow novalike nuclear-powered event.

Gallagher, J. S.↗
NASA NTRS1980

IUE observations of the hot components in two symbiotic stars

Recent IUE observations reveal striking differences in the UV spectra of two symbiotic stars, R Aqr and RW Hya. RW Hya is found to be an unexpectedly intense source of UV radiation. The measurements reported demonstrate the presence of a hot component in each star, supporting the view that each is a binary system with a luminous red primary and a hot, subluminous companion. In one case, the hot companion manifests itself by exciting a compact nebulosity; in the other case the continuous spectrum of the hot star is directly detected, while the continuum of nebulosity excited by the hot star is detected at longer wavelengths.

Michalitsianos, A. G.↗
NASA NTRS1980

BI Crucis - A new symbiotic star

A Mount Stromlo spectrogram of BI Cru taken in 1962 shows emission lines of H I, He I, He II, Fe II, N III, and the forbidden O III, forbidden Ne III, and forbidden S II transitions superposed on a weak bluish continuum. A spectrogram by Allen in 1974 shows emission lines of H I and Fe II and possibly weak He I, forbidden Fe II, and forbidden O I lines superposed on an M-star absorption spectrum. The object is evidently a symbiotic star showing large variations in its spectral character. Significant differences exist in the mean ion velocities and appear to be correlated with ionization potential.

Henize, K. G.↗