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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Optimal local truncation error method for 3-D elasticity interface problems

The paper deals with a new effective numerical technique on unfitted Cartesian meshes for simulations of heterogeneous elastic materials. Here, we develop the optimal local truncation error method (OLTEM) with 27- point stencils (similar to those for linear finite elements) for the 3-D time-independent elasticity equations with irregular interfaces. Only displacement unknowns at each internal Cartesian grid point are used. The interface conditions are added to the expression for the local truncation error and do not change the width of the stencils. The unknown stencil coefficients are calculated by the minimization of the local truncation error of the stencil equations and yield the optimal second order of accuracy for OLTEM with the 27-point stencils on unfitted Cartesian meshes. A new post-processing procedure for accurate stress calculations has been developed. Similar to basic computations it uses OLTEM with the 27-point stencils and the elasticity equations. The post-processing procedure can be easily extended to unstructured meshes and can be independently used with existing numerical techniques (e.g., with finite elements). Numerical experiments show that at an accuracy of 0.1% for stresses, OLTEM with the new post-processing procedure significantly (by 10 5 -10 9 times) reduces the number of degrees of freedom compared to linear finite elements. OLTEM with the 27-point stencils yields even more accurate results than high-order finite elements with wider stencils.

42 ENGINEERING↗
DOE OSTI2021

Shape Stability of Truncated Octahedral fcc Metal Nanocrystals

Metallic nanocrystals (NCs) can be synthesized with tailored nonequilibrium shapes to enhance desired properties, e.g., octahedral fcc metal NCs optimize catalytic activity associated with {111} facets. However, maintenance of optimized properties requires stability against thermal reshaping. Thus, we analyze the reshaping of truncated fcc metal octahedra mediated by surface diffusion using a stochastic atomistic-level model with energetic input parameters for Pd. Furthermore, the model describes NC thermodynamics by an effective nearest-neighbor interaction and includes a realistic treatment of diffusive hopping for undercoordinated surface atoms. Kinetic Monte Carlo simulation reveals that the effective barrier, E eff , for the initial stage of reshaping is strongly tied to the degree of truncation of the vertices in the synthesized initial octahedral shapes. This feature is elucidated via exact analytic determination of the energy variation along the optimal reshaping pathway at low-temperature (T), which involves transfer of atoms from truncated {100} vertex facets to form new layers on {111} side facets. Deviations from predictions of the low-T analysis due to entropic effects are more prominent for higher T and larger NC sizes.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Asynchronous Truncated Multigrid-Reduction-in-Time

In this paper, we present the new “asynchronous truncated multigrid-reduction-in-time” (AT-MGRIT) algorithm for introducing time parallelism to the solution of discretized time-dependent problems. The new algorithm is based on the multigrid-reduction-in-time (MGRIT) approach, which, in certain settings, is equivalent to another common multilevel parallel-in-time method, Parareal. In contrast to Parareal and MGRIT that both consider a global temporal grid over the entire time interval on the coarsest level, the AT-MGRIT algorithm uses truncated local time grids on the coarsest level, each grid covering certain temporal subintervals. Further, these local grids can be solved completely in an independent way from each other, which reduces the sequential part of the algorithm and, thus, increases parallelism in the method. Here, we study the effect of using truncated local coarse grids on the convergence of the algorithm, both theoretically and numerically, and show, using challenging nonlinear problems, that the new algorithm consistently outperforms classical Parareal/MGRIT in terms of time to solution.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Production of novel SARS-CoV-2 Spike truncations in Chinese hamster ovary cells leads to high expression and binding to antibodies

SARS-CoV-2 Spike is a key protein that mediates viral entry into cells and elicits antibody responses. Its importance in infection, diagnostics, and vaccinations has created a large demand for purified Spike for clinical and research applications. Spike is difficult to express, prompting modifications to the protein and expression platforms to improve yields. Alternatively, the Spike receptor-binding domain (RBD) is commonly expressed with higher titers, though it has lower sensitivity in serological assays. Here, we improve transient Spike expression in Chinese hamster ovary (CHO) cells. We demonstrate that Spike titers increase significantly over the expression period, maximizing at 14 mg L -1 on day 7. In comparison, RBD titers peak at 54 mg L -1 on day 3. Next, we develop eight Spike truncations (T1–T8) in pursuit of truncation with high expression and antibody binding. The truncations T1 and T4 express at 130 and 73 mg L -1 , respectively, which are higher than our RBD titers. Purified proteins were evaluated for binding to antibodies raised against full-length Spike. T1 has similar sensitivity as Spike against a monoclonal antibody and even outperforms Spike for a polyclonal antibody. These results suggest that T1 is a promising Spike alternative for use in various applications.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

Truncated-Bloch-wave solitons in nonlinear fractional periodic systems

We address the existence and stability properties of localized truncated-Bloch-wave solitons in one-dimensional nonlinear fractional Schrödinger equation with an optical lattice. Under a defocusing nonlinearity, extended nonlinear Bloch waves with finite amplitudes bifurcate from linear Bloch modes at band edges. The variation of Lévy index has a profound impact on the existence, profile, power and stability of nonlinear modes. Truncated-Bloch-wave solitons with different number of units are found in finite bandgaps. The main body of truncated-Bloch-wave soliton coincides exactly with the corresponding nonlinear Bloch wave. While solitons residing in the second gap propagate stably in a narrow region, nonlinear states in the first gap are stable in almost their whole existence domains. Specially, the instability of solitons can be significantly suppressed by the decrease of Lévy index.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2018

Pseudo-phosphorylation at AT8 epitopes regulates the tau truncation at aspartate 421

Tau pathology in Alzheimer's disease (AD) includes hyperphosphorylation and truncation of tau. Phosphorylation at S422 is found to suppress truncation of tau at D421 that leading to the generation of ΔTau. However, the interrelation between hyperphosphorylation and generation of ΔTau in AD remains elusive. In current study, staurosporine (Stau) induced ΔTau generation by caspases in SH-SY5Y cells with tau overexpression was found to be accompanied by a dramatic dephosphorylation at S422 and the epitope of the diagnostic antibody AT8 (S199 + S202 + T205), but a moderate dephosphorylation of PHF1 (S396 + S404) epitope. Therefore, to explore the effect of AT8 epitope on tau truncation, the residues in AT8 epitope were mutated to produce “pseudo-phosphorylated” (AT8E) or “pseudo-unphosphorylated” (AT8A) tau constructs. With Stau treatment, the generation of ΔTau from tau-AT8E was significantly attenuated comparing with that from tau-AT8A, which was S422-independent in that addition of S422A mutation still preserved this effect. Interestingly, this modulatory effect was able to be reversed by addition of PHF1E mutation. Moreover, treating the crude tau extracts with recombinant caspase-3 in vitro, also showed that ΔTau level was suppressed by AT8E, and potentiated by AT8E + PHF1E. The results primarily revealed the modulating effects of phosphorylation on ΔTau generation which may have potential implications in tau pathological processes and therapeutic intervention.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site

CCL21 chemokine binds the G protein-coupled receptor CCR7, aiding not only in immune response but also in cancer metastasis. Compared with other chemokines, CCL21 has a unique extended unstructured C-terminus that is truncated in some naturally occurring variants. We have determined the X-ray crystallographic structure of a truncated CCL21 (residues 1–79) lacking the extended C-terminus and identified, via two-dimensional nuclear magnetic resonance (NMR), a putative sulfotyrosine-binding site that may recognize such post-translationally modified tyrosine residues on the receptor. Compared to the previously determined NMR structure of full-length CCL21, the crystal structure presents new druggable binding hot spots resulting from an alternative N-loop conformation. In addition, whereas the previous NMR structure did not provide any structural information after residue 70, the C-terminus of the truncated CCL21, ordered up to Ala77 in our crystal structure, is placed near the N-loop and sulfotyrosine-binding site, indicating that the extended C-terminus of full-length CCL21 can interact with this important region for receptor binding. These observations suggest a potential origin for the autoinhibition of CCL21 activity that was recently described. In conclusion, the new crystal structure and binding hot spot analysis have important implications for the function of the CCL21 C-terminus and drug discovery.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2019

Generation of controllable Ince – Gaussian modes in a passively Q-switched microchip laser under truncated decentred Gaussian beam pumping

We report a passively Q-switched (PQS) Nd : YAG/Cr{sup 4+}: YAG microchip laser pumped by a truncated decentred Gaussian beam for controllable Ince – Gaussian (IG) mode generation. IG{sup e}(n, n) modes (n = 0, …, 4) are obtained experimentally by choosing the appropriate truncation parameter, which is defined as a ratio of the radius of the aperture to the beam waist. The IG{sup e}(4, 4) mode is produced in the PQS Nd : YAG/Cr{sup 4+}: YAG microchip laser under decentred Gaussian beam pumping at a pump power of 2.6 W, the mode selection being achieved by reducing the truncation parameter. The threshold pump powers for different IG{sup e}(n, n) modes are theoretically calculated to illustrate the mode selection process. The pulsed IG{sup e}(n, n) (n ≥ 1) mode generation with a peak power exceeding 1 kW and a nanosecond pulse width is obtained in the PQS microchip laser, which is a potential laser source for forming flexible vortex arrays for optical tweezers. (control of laser radiation parameters)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2025

Mitigation of DESI fiber assignment incompleteness effect on two-point clustering with small angular scale truncated estimators

We present a method to mitigate the effects of fiber assignment incompleteness in two-point power spectrum and correlation function measurements from galaxy spectroscopic surveys, by truncating small angular scales from estimators. We derive the corresponding modified correlation function and power spectrum windows to account for the small angular scale truncation in the theory prediction. We validate this approach on simulations reproducing the Dark Energy Spectroscopic Instrument (DESI) Data Release 1 (DR1) with and without fiber assignment. We show that we recover unbiased cosmological constraints using small angular scale truncated estimators from simulations with fiber assignment incompleteness, with respect to standard estimators from complete simulations. Additionally, we present an approach to remove the sensitivity of the fits to high k modes in the theoretical power spectrum, by applying a transformation to the data vector and window matrix. We find that our method efficiently mitigates the effect of fiber assignment incompleteness in two-point correlation function and power spectrum measurements, at low computational cost and with little statistical loss.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Truncation effects in the charge representation of the O(2) model

The O(2) model in Euclidean space-time is the zero-gauge-coupling limit of the compact scalar quantum electrodynamics. In this work, we obtain a dual representation of it called the charge representation. We study the quantum phase transition in the charge representation with a truncation to “spin $\textit{S}$," where the quantum numbers have an absolute value less than or equal to $\textit{S}$. The charge representation preserves the gapless-to-gapped phase transition even for the smallest spin truncation $\textit{S}$ = 1. The phase transition for $\textit{S}$ = 1 is an infinite-order Gaussian transition with the same critical exponents $\textit{δ}$ and $\textit{η}$ as the Berezinskii-Kosterlitz-Thouless (BKT) transition, while there are true BKT transitions for $\textit{S}$ ≥ 2 . The essential singularity in the correlation length for $\textit{S}$ = 1 is different from that for $\textit{S}$ ≥ 2 . The exponential convergence of the phase-transition point is studied in both Lagrangian and Hamiltonian formulations. We discuss the effects of replacing the truncated $\hat{U}^±$ = exp ($± i\hat{θ}$) operators by the spin ladder operators $\hat{S}^±$ in the Hamiltonian. The marginal operators vanish at the Gaussian transition point for $\textit{S}$ = 1, which allows us to extract the $\textit{η}$ exponent with high accuracy.

36 MATERIALS SCIENCE↗
DOE OSTI2017

Crystal truncation rods from miscut surfaces

Crystal truncation rods are used to study surface and interface structure. Since real surfaces are always somewhat miscut from a low index plane, it is important to study the effect of miscuts on crystal truncation rods. We develop a model that describes the truncation rod scattering from miscut surfaces that have steps and terraces. We show that nonuniform terrace widths and jagged step edges are both forms of roughness that decrease the intensity of the rods. Nonuniform terrace widths also result in a broad peak that overlaps the rods. We use our model to characterize the terrace width distribution and step edge jaggedness on three SrTiO 3 (001) samples, showing excellent agreement between the model and the data, confirmed by atomic force micrographs of the surface morphology. As a result, we expect our description of terrace roughness will apply to many surfaces, even those without obvious terracing.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Nucleon-pair truncation of the shell model for medium-heavy nuclei

Background: Establishing computationally tractable models of atomic nuclei is a long-time goal of nuclear structure physics. A flexible framework which easily includes excited states and many-body correlations is the configuration-interaction shell model (SM), but the exponential growth of the basis means one needs an efficient truncation scheme, ideally one that includes both deformation and pairing correlations. Purpose: Here, we propose an efficient truncation scheme of the SM: starting from a pair condensate variationally defined by Hartree-Fock single-particle states and the particle-number conserved Bardeen-Cooper-Schrieffer (NBCS) approximation, we carry out projection of states with good angular momentum. Methods: After generating Hartree-Fock single-particle states with Kramers degeneracy in a SM space, we optimize the pair amplitudes in the NBCS by minimizing the energy, and then use linear algebra projection (LAP) of states with good angular momentum. Both NBCS and LAP are computationally fast. Results: Our calculations yield good agreement with full configuration-interaction SM calculations for low-lying states of transitional and rotational nuclei with axially symmetric and triaxial deformation in medium- and heavy-mass regions: 44,46,48 Ti, 48,50 Cr, 52 Fe, 60,62,64 Zn, 66,68 Ge, 68 Se, and 108,110 Xe. We predict low-lying states of 112–114 Ba and 116–120 Ce, nuclei difficult to reach by large-scale SM calculations. Conclusions: Both pair correlation and the configuration mixing between different intrinsic states play a key role in reproducing collectivity and shape coexistence, demonstrating the utility of this truncation scheme of the SM to study transitional and deformed nuclei.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2025

Exactness of the normal-ordered two-body truncation of three-nucleon forces

Reference-state-based many-body methods start from Hamiltonians that are normal ordered with respect to the reference state. In low-energy nuclear physics applications, normal-ordered Hamiltonians consisting of two- and three-nucleon forces are usually truncated at the two-body rank with residual three-nucleon operators being discarded. Benchmark computations have shown that this truncation is accurate, but we lack an understanding about why it works. Here, we show that the normal-ordered two-body truncation is exact for zero-range three-body forces when nuclei are computed using the coupled cluster with singles and doubles method. As the nuclear three-nucleon force is short ranged and a three-body contact is a leading term in effective field theories of quantum chromodynamics, our result provides an analytical basis for the popular normal-ordered two-body approximation.

Rothman, Maxwell [Univ. of Tennessee, Knoxville, T↗
DOE OSTI2025

Efficient truncations of SU( N c ) lattice gauge theory for quantum simulation

Quantum simulations of lattice gauge theories offer the potential to directly study the nonperturbative dynamics of quantum chromodynamics, but naive analyses suggest that they require large computational resources. Large 𝑁 𝑐 expansions are performed to order 1/𝑁 𝑐 to simplify the Hamiltonian of pure SU⁡(𝑁𝑐) lattice gauge theories. A reformulation of the electric basis is introduced with a truncation strategy based on the construction of local Krylov subspaces with plaquette operators. Numerical simulations show that these truncated Hamiltonians are consistent with traditional lattice calculations at relatively small couplings. It is shown that the computational resources required for quantum simulation of time evolution generated by these Hamiltonians is 17–19 orders of magnitude smaller than previous approaches, provided that the truncations in this work can reach lattice spacings in three-dimensional simulations comparable to the two-dimensional simulations performed.

Lattice QCD↗
DOE OSTI2014

SU-E-I-51: Use of Blade Sequences in Cervical Spine MR Imaging for Eliminating Motion, Truncation and Flow Artifacts

Purpose: To assess the efficacy of the BLADE technique to eliminate motion, truncation, flow and other artifacts in Cervical Spine MRI compared to the conventional technique. To study the ability of the examined sequences to reduce the indetention and wrap artifacts, which have been reported in BLADE sagittal sequences. Methods: Forty consecutive subjects, who had been routinely scanned for cervical spine examination using four different image acquisition techniques, were analyzed. More specifically, the following pairs of sequences were compared: a) T2 TSE SAG vs. T2 TSE SAG BLADE and b) T2 TIRM SAG vs. T2 TIRM SAG BLADE. A quantitative analysis was performed using the signal-to-noise ratio (SNR), contrast-to-noise ratio (CNR) and relative contrast (ReCon) measures. A qualitative analysis was also performed by two radiologists, who graded seven image characteristics on a 5-point scale (0:non-visualization; 1:poor; 2:average; 3:good; 4:excellent). The observers also evaluated the presence of image artifacts (motion, truncation, flow, indentation). Results: Based on the findings of the quantitative analysis, the ReCON values of the CSF (cerebrospinal fluid)/SC (spinal cord) between TIRM SAG and TIRM SAG BLADE were found to present statistical significant differences (p<0.001). Regarding motion and truncation artifacts, the T2 TSE SAG BLADE was superior compared to the T2 TSE SAG and the T2 TIRM SAG BLADE was superior compared to the T2 TIRM SAG. Regarding flow artifacts, T2 TIRM SAG BLADE eliminated more artifacts compared to the T2 TIRM SAG. Conclusion: The use of BLADE sequences in cervical spine MR examinations appears to be capable of potentially eliminating motion, pulsatile flow and trancation artifacts. Furthermore, BLADE sequences are proposed to be used in the standard examination protocols based on the fact that a significantly improved image quality could be achieved.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2022

Hamiltonian Truncation Effective Theory

Hamiltonian truncation is a non-perturbative numerical method for calculating observables of a quantum field theory. The starting point for this method is to truncate the interacting Hamiltonian to a finite-dimensional space of states spanned by the eigenvectors of the free Hamiltonian H_0 H 0 with eigenvalues below some energy cutoff E_\text{max} E max . In this work, we show how to treat Hamiltonian truncation systematically using effective field theory methodology. We define the finite-dimensional effective Hamiltonian by integrating out the states above E_\text{max} E max . The effective Hamiltonian can be computed by matching a transition amplitude to the full theory, and gives corrections order by order as an expansion in powers of 1/E_\text{max} 1 / E max . The effective Hamiltonian is non-local, with the non-locality controlled in an expansion in powers of H_0/E_\text{max} H 0 / E max . The effective Hamiltonian is also non-Hermitian, and we discuss whether this is a necessary feature or an artifact of our definition. We apply our formalism to 2D \lambda\phi^4 λ ϕ 4 theory, and compute the the leading 1/E_\text{max}^2 1 / E max 2 corrections to the effective Hamiltonian. We show that these corrections nontrivially satisfy the crucial property of separation of scales. Numerical diagonalization of the effective Hamiltonian gives residual errors of order 1/E_\text{max}^3 1 / E max 3 , as expected by our power counting. We also present the power counting for 3D \lambda \phi^4 λ ϕ 4 theory and perform calculations that demonstrate the separation of scales in this theory.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2025

Sequency Hierarchy Truncation (SeqHT) for Adiabatic State Preparation and Time Evolution in Quantum Simulations

We introduce the Sequency Hierarchy Truncation (SeqHT) scheme for reducing the resources required for state preparation and time evolution in quantum simulations, based upon a truncation in sequency. For the λϕ 4 interaction in scalar field theory, or any interaction with a polynomial expansion, upper bounds on the contributions of operators of a given sequency are derived. For the systems we have examined, observables computed in sequency-truncated wavefunctions, including quantum correlations as measured by magic, are found to step-wise converge to their exact values with increasing cutoff sequency. The utility of SeqHT is demonstrated in the adiabatic state preparation of the λϕ 4 anharmonic oscillator ground state using IBM's quantum computer ibm_sherbrooke. Using SeqHT, the depth of the required quantum circuits is reduced by ∼ 30 % , leading to significantly improved determinations of observables in the quantum simulations. More generally, SeqHT is expected to lead to a reduction in required resources for quantum simulations of systems with a hierarchy of length scales.

Li, Zhiyao [Univ. of Washington, Seattle, WA (Unit↗
DOE OSTI2017

Truncation of the Accretion Disk at One-third of the Eddington Limit in the Neutron Star Low-mass X-Ray Binary Aquila X-1

We perform a reflection study on a new observation of the neutron star (NS) low-mass X-ray binary Aquila X-1 taken with NuSTAR during the 2016 August outburst and compare with the 2014 July outburst. The source was captured at ∼32% L {sub Edd}, which is over four times more luminous than the previous observation during the 2014 outburst. Both observations exhibit a broadened Fe line profile. Through reflection modeling, we determine that the inner disk is truncated R{sub in,2016}=11{sub −1}{sup +2} R{sub g} (where R {sub g} = GM/c {sup 2}) and R{sub in,2014}=14±2 R{sub g} (errors quoted at the 90% confidence level). Fiducial NS parameters (M {sub NS} = 1.4 M {sub ⊙}, R {sub NS} = 10 km) give a stellar radius of R {sub NS} = 4.85 R {sub g}; our measurements rule out a disk extending to that radius at more than the 6σ level of confidence. We are able to place an upper limit on the magnetic field strength of B ≤ 3.0–4.5 × 10{sup 9} G at the magnetic poles, assuming that the disk is truncated at the magnetospheric radius in each case. This is consistent with previous estimates of the magnetic field strength for Aquila X-1. However, if the magnetosphere is not responsible for truncating the disk prior to the NS surface, we estimate a boundary layer with a maximum extent of R{sub BL,2016}∼10 R{sub g} and R{sub BL,2014}∼6 R{sub g}. Additionally, we compare the magnetic field strength inferred from the Fe line profile of Aquila X-1 and other NS low-mass X-ray binaries to known accreting millisecond X-ray pulsars.

79 ASTRONOMY AND ASTROPHYSICS↗