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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4

Information storage at the molecular level - The design of a molecular shift register memory

The control of electron transfer rates is discussed and a molecular shift register memory at the molecular level is described. The memory elements are made up of molecules which can exist in either an oxidized or reduced state and the bits can be shifted between the cells with photoinduced electron transfer reactions. The device integrates designed molecules onto a VLSI substrate. A control structure to modify the flow of information along a shift register is indicated schematically.

Beratan, David N.↗

Kinetics and transport at AMTEC electrodes. II - Temperature dependence of the interfacial impedance of Na(g)/porous Mo/Na-Beta-double prime alumina

The exchange current, transfer coefficient, mass-transport parameters, and electrode capacitance at the Na(g)/porous Mo/Na-Beta-double prime alumina solid electrolyte (BASE) phase boundary have been evaluated from 740 to 1220 K. The transfer coefficient exhibits a value close to 0.5 and the exchange current is dominated by collision frequency, with no significant activation energy. Since the porous Mp-electrode adopts a fairly regular microstructure on the BASE surface, the magnitude of the exchange current of mature electrodes directly depends on the actual contact zone of the porous metal film with the BASE ceramic, and decreases slightly as grain growth occurs. The exchange currents and the mass-transport parameters derived for very porous, thin Mo electrodes indicate that the charge-transfer reaction occurs at a small fraction of the interface. High-frequency limiting capacitance and resistance values due to the interface show potential dependence and a value on the order of 1 F/sq m and 0.1-1.0 Ohm-sq cm.

Williams, R. M.↗

An estimating formula for ion-atom association rates in gases

A simple estimating formula is derived for rate coefficients of three-body ion atom association in gases and compare its predictions to experimental data on ion association and three-body radiative charge transfer reactions of singly- and doubly-charged rare-gas ions. The formula appears to reproduce most experimental data quite well. It may be useful for estimating the rates of reactions that have not been studied in the laboratory.

Chatterjee, B. K.↗

Light ion flow in the nightside ionosphere of Venus

The flow characteristics of the light ions H(+) and He(+) have been studied in the midnight region of the ionosphere of Venus. Measurements of ion composition, electron and ion temperatures and magnetic fields by instruments onboard the Pioneer Venus Orbiter have been used in rite electron and ion equations of conservation of mass and momentum to derive the vertical flow velocities of H(+) and He(+). When average height profiles of the measured quantities were used, H(+) was found to flow upward, accelerating to speeds of almost 1 km/s at the ion-exobase. In a similar fashion, He(+) was found to flow downward into the neutral atmosphere where it is readily quenched by charge transfer reactions. The polarization electric field played an important role in forcing H(+) upward, but did not contribute enough to the He(+) force balance to produce upward flow. At the ion-exobase, the outward electric polarization force on H(+) was shown to be five times the gravitational force. Using an analogy with the terrestrial ion-exosphere, H(+) was inferred to flow upward into the ionotail of Venus and accelerate to escape speeds. A planet averaged escape flux of 1.4 x 10 exp 7/sq cm/s was calculated, which is comparable to hydrogen loss rates estimated by other investigators.

Hartle, R. E.↗

Laboratory Studies of Thermal Energy Charge Transfer of Silicon and Iron Ions in Astrophysical Plasmas

The laser ablation/ion storage facility at the UNLV Physics Department is dedicated to the study of atomic processes in low temperature plasmas. Our current program is directed to the study of charge transfer of multiply charged ions and neutrals that are of importance to astrophysics at energies less than 1 eV (about 10(exp 4) K). Specifically, we measure the charge transfer rate coefficient of ions such as N(2+), Si(3+), Si(3+), with helium and Fe(2+) with molecular and atomic hydrogen. All these ions are found in a variety of astrophysical plasmas. Their electron transfer reactions with neutral atoms can affect the ionization equilibrium of the plasma.

Kwong, Victor H. S.↗

Self-Incorporation of Coenzymes by Ribozymes

RNA molecules that are assembled from the four standard nucleotides contain a limited number of chemical functional groups, a characteristic that is generally thought to restrict the potential for catalysis by ribozymes. Although polypeptides carry a wider range of functional groups, many contemporary protein-based enzymes employ coenzymes to augment their capabilities. The coenzymes possess additional chemical moieties that can participate directly in catalysis and thereby enhance catalytic function. In this work, we demonstrate a mechanism by which ribozymes can supplement their limited repertoire of functional groups through RNAcatalyzed incorporation of various coenzymes and coenzyme analogues. The group I ribozyme of Tetrahymena thermophila normally mediates a phosphoester transfer reaction that results in the covalent attachment of guanosine to the ribozyme. Here, a shortened version of the ribozyme is shown to catalyze the self-incorporation of coenzymes and coenzyme analogues, such as NAD+ and dephosphorylated CoA-SH. Similar ribozyme activities may have played an important role in the "RNA world," when RNA enzymes are thought to have maintained a complex metabolism in the absence of proteins and would have benefited from the inclusion of additional functional groups.

Breaker, Ronald R.↗

Laboratory Astrophysics at the LLNL Electron Beam Ion Traps: EBIT-I and EBIT-II

In order to provide a complete, accurate set of atomic data for interpreting spectra provided by missions such as XMM-Newton, the Chandra X-Ray Observatory, and Astro-E2, we have harnessed the Lawrence Livermore National Laboratory's electron beam ion traps EBIT-I. EBIT-II, and Super-EBIT for laboratory astrophysics. In support of this work we have developed a number of unique techniques, including the ability to experimentally simulate a Maxwellian distribution of electron energies and measuring low-energy charge exchange cross sections using the magnetic trapping mode. We have also built and operated a full suite of spectrometers spanning the 1-7000 Angstrom wavelength band, the most recent being a spectrometer based on a spare Astro-E (6 x 6) microcalorimeter array. Results of our efforts include a complete list of wavelengths of the Fe L-shell transitions, measurements of absolute and relative cross sections for direct impact, dielectronic, and resonance excitation, and measurements of low energy charge transfer reactions. A brief overview of the LLNL ebit facility, its capabilities, and some results will be discussed.

Brown, G. V.↗

Chemical differentiation in regions of massive star formation

We have reexamined the origin of the apparent differentiation between nitrogen-bearing molecules and complex oxygen-bearing molecules that is observed in hot molecular cores associated with massive protostars. Observations show that methanol is an ubiquitous and abundant component of protostellar ices. Recent observations suggest that ammonia may constitute an appreciable fraction of the ices toward some sources. In contrast to previous theories that suggested that N/O differentiation was caused by an anticorrelation between methanol and ammonia in the precursor grain mantles, we show that the presence of ammonia in mantles and the core temperature are key quantities in determining N/O differentiation. Calculations are presented which show that when large amounts of ammonia are evaporated alkyl cation transfer reactions are suppressed and the abundances of complex O-bearing organic molecules greatly reduced. Cooler cores (100 K) eventually evolve to an oxygen-rich chemical state similar to that attained when no ammonia was injected, but on a timescale that is an order of magnitude longer (~10(5) yr). Hotter cores (300 K) never evolve an O-rich chemistry unless ammonia is almost absent from the mantles. In this latter case, a complex O-rich chemistry develops on a timescale of ~10(4) yr, as in previous models, but disappears in about 2 x 10(5) yr, after which time the core is rich in NH3, HCN, and other N-bearing molecules. There are thus two ways in which N-rich cores can occur. We briefly discuss the implications for the determination of hot-core ages and for explaining N/O differentiation in several well-studied sources.

NASA Center ARC↗

In vitro evolution of a ribozyme that contains 5-bromouridine

The Tetrahymena group I ribozyme was modified by replacing all 99 component uridine residues with 5-bromouridine. This resulted in a 13-fold reduction in catalytic efficiency in the RNA-catalyzed phosphoester-transfer reaction compared to the behavior of the unmodified ribozyme. A population of 10(13) variant ribozymes was constructed, each containing 5-bromouridine in place of uridine. Five successive 'generations' of in vitro evolution were carried out, selecting for improved phosphoester transferase activity. The evolved molecules exhibited a 27-fold increase in catalytic efficiency compared to the wild-type bromouridine-containing ribozyme, even exceeding that of the wild-type ribozyme in the non-brominated form. Three specific mutations were found to be responsible for this altered behavior. These mutations enhanced activity in the context of 5-bromouridine, but were detrimental in the context of unmodified uridine. The evolved RNAs not only tolerated but came to exploit the presence of the nucleotide analogue in carrying out their catalytic function.

NASA Discipline Exobiology↗

Chance and necessity in the selection of nucleic acid catalysts

In Tom Stoppard's famous play [Rosencrantz and Guildenstern are Dead], the ill-fated heroes toss a coin 101 times. The first 100 times they do so the coin lands heads up. The chance of this happening is approximately 1 in 10(30), a sequence of events so rare that one might argue that it could only happen in such a delightful fiction. Similarly rare events, however, may underlie the origins of biological catalysis. What is the probability that an RNA, DNA, or protein molecule of a given random sequence will display a particular catalytic activity? The answer to this question determines whether a collection of such sequences, such as might result from prebiotic chemistry on the early earth, is extremely likely or unlikely to contain catalytically active molecules, and hence whether the origin of life itself is a virtually inevitable consequence of chemical laws or merely a bizarre fluke. The fact that a priori estimates of this probability, given by otherwise informed chemists and biologists, ranged from 10(-5) to 10(-50), inspired us to begin to address the question experimentally. As it turns out, the chance that a given random sequence RNA molecule will be able to catalyze an RNA polymerase-like phosphoryl transfer reaction is close to 1 in 10(13), rare enough, to be sure, but nevertheless in a range that is comfortably accessible by experiment. It is the purpose of this Account to describe the recent advances in combinatorial biochemistry that have made it possible for us to explore the abundance and diversity of catalysts existing in nucleic acid sequence space.

Review, Tutorial↗

In vitro selection of functional nucleic acids

In vitro selection allows rare functional RNA or DNA molecules to be isolated from pools of over 10(15) different sequences. This approach has been used to identify RNA and DNA ligands for numerous small molecules, and recent three-dimensional structure solutions have revealed the basis for ligand recognition in several cases. By selecting high-affinity and -specificity nucleic acid ligands for proteins, promising new therapeutic and diagnostic reagents have been identified. Selection experiments have also been carried out to identify ribozymes that catalyze a variety of chemical transformations, including RNA cleavage, ligation, and synthesis, as well as alkylation and acyl-transfer reactions and N-glycosidic and peptide bond formation. The existence of such RNA enzymes supports the notion that ribozymes could have directed a primitive metabolism before the evolution of protein synthesis. New in vitro protein selection techniques should allow for a direct comparison of the frequency of ligand binding and catalytic structures in pools of random sequence polynucleotides versus polypeptides.

Review↗

Cleavage of an amide bond by a ribozyme

A variant form of a group I ribozyme, optimized by in vitro evolution for its ability to catalyze magnesium-dependent phosphoester transfer reactions involving DNA substrates, also catalyzes the cleavage of an unactivated alkyl amide when that linkage is presented in the context of an oligodeoxynucleotide analog. Substrates containing an amide bond that joins either two DNA oligos, or a DNA oligo and a short peptide, are cleaved in a magnesium-dependent fashion to generate the expected products. The first-order rate constant, kcat, is 0.1 x 10(-5) min-1 to 1 x 10(-5) min-1 for the DNA-flanked substrates, which corresponds to a rate acceleration of more than 10(3) as compared with the uncatalyzed reaction.

NASA Discipline Exobiology↗

Search for the OH (X(2)Pi) Meinel band emission in meteors as a tracer of mineral water in comets: detection of N(2)(+) (A-X)

We report the discovery of the N(2)(+) A-X Meinel band in the 780-840 nm meteor emission from two Leonid meteoroids that were ejected less than 1000 years ago by comet 55P/Tempel-Tuttle. Our analysis indicates that the N(2)(+) molecule is at least an order of magnitude less abundant than expected, possibly as a result of charge transfer reactions with meteoric metal atoms. This new band was found while searching for rovibrational transitions in the X(2)Pi electronic ground state of OH (the OH Meinel band), a potential tracer of water bound to minerals in cometary matter. The electronic A-X transition of OH has been identified in other Leonid meteors. We did not detect this OH Meinel band, which implies that the excited A state is not populated by thermal excitation but by a mechanism that directly produces OH in low vibrational levels of the excited A(2)Sigma state. Ultraviolet dissociation of atmospheric or meteoric water vapor is such a mechanism, as is the possible combustion of meteoric organics.

Meteoroids↗

Using Non-Linear Statistical Methods with Laboratory Kinetic Data

This paper will demonstrate the usefulness of standard non-linear statistical analysis on ICR and SIFT kinetic data. The specific systems used in the demonstration are the isotopic and change transfer reactions in the system of H2O+/D2O, H30+/D2O, and other permutations.

non-linear analysis kinetic isotopic permutations ↗

STEREO Observations of Energetic Neutral Hydrogen Atoms during the 5 December 2006 Solar Flare

We report the discovery of energetic neutral hydrogen atoms emitted during the X9 solar event of December 5, 2006. Beginning ~1 hour following the onset of this E79 flare, the Low Energy Telescopes (LETs) on both the STEREO A and B spacecraft observed a sudden burst of 1.6 to 15 MeV protons beginning hours before the onset of the main solar energetic particle (SEP) event at Earth. More than 70% of these particles arrived from a longitude within 10 of the Sun, consistent with the measurement resolution. The derived emission profile at the Sun had onset and peak times remarkably similar to the GOES soft X-ray profile and continued for more than an hour. The observed arrival directions and energy spectrum argue strongly that the particle events less than 5 MeV were due to energetic neutral hydrogen atoms (ENAs). To our knowledge, this is the first reported observation of ENA emission from a solar flare/coronal mass ejection. Possible origins for the production of ENAs in a large solar event are considered. We conclude that the observed ENAs were most likely produced in the high corona and that charge-transfer reactions between accelerated protons and partially-stripped coronal ions are an important source of ENAs in solar events.

Mewaldt, R. A.↗

Observation and Interpretation of Energetic Neutral Hydrogen Atoms from the December 5, 2006 Solar Event

We report the first observations of energetic neutral atoms (ENAs) from a solar flare/coronal mass ejection event. The observations were made during the December 5, 2006 X9 solar flare, located at E79, by the Low Energy Telescopes (LETs) on the STEREO A and B spacecraft. Within 1-2 hours of the flare onset, both LETs observed a sudden burst of 1.6 to 15 MeV protons arriving hours before the onset of the main solar energetic particle (SEP) event at Earth. More than 70% of these particles arrived from a longitude within +-10 degrees of the Sun. The derived emission profile at the Sun lasted for more than an hour and had a profile remarkably similar to the GOES soft X-ray profile. The observed arrival directions and energy spectrum argue strongly that the particle events <5 MeV were due to energetic neutral hydrogen atoms that were stripped of their electrons upon entering the LET sensor. To our knowledge, this is the first reported observation of ENA emission from a solar flare/coronal mass ejection. We discuss possible origins for the production of ENAs in solar events, including charge-transfer reactions involving both flare and shock-accelerated protons. Assuming isotropic emission, we find that ~2 x 10E28 ENAs escaped from the Sun in the upper hemisphere. Based on the 2.2 MeV gamma-ray emission observed by RHESSI in this event, and using measured and theoretical cross sections, we estimate that ~3 x 10E31 ENAs with 1.8 - 5 MeV could be produced by protons accelerated in the flare. CME-driven shock acceleration is also a possible ENA source, but unfortunately there were no CME observations available from this event. Taking into account ENA losses, we conclude that the observed ENAs were most likely produced in the high corona at heliocentric distances 1.6 solar radii.

Mewaldt, R. A.↗

Measurement Report :Emission Factors of NH3 and NHx for Wildfires and Agricultural Fires in the United States

During the 2019 Fire Influence on Regional to Global Environments and Air Quality (FIREX-AQ) study, the NASA DC-8 carried out in situ chemical measurements in smoke plumes emitted from wildfires and agricultural fires in the contiguous United States. The DC-8 payload included a modified proton-transfer-reaction time-of-flight mass spectrometer (PTR-ToF-MS) for the fast measurement of gaseous ammonia (NH 3 ) and a high-resolution time-of-flight aerosol mass spectrometer (AMS) for the fast measurement of submicron particulate ammonium (NH 4 + ). We herein report data collected in smoke plumes emitted from 6 wildfires in the Western United States, 2 prescribed grassland fires in the Central United States, 1 prescribed forest fire in the Southern United States, and 66 small agricultural fires in the Southeastern United States. Smoke plumes contained double to triple digit ppb levels of NH 3 . In the wildfire plumes, a significant fraction of NH 3 had already been converted to NH 4 + at the time of sampling (≥2 h after emission). Substantial amounts of NH 4 + were also detected in freshly emitted smoke from corn and rice field fires. We herein present a comprehensive set of emission factors of NH 3 and NH x , with NH x = NH 3 + NH 4 + . Average NH 3 and NH x emission factors for wildfires in the Western United States were 1.86±0.75 g kg −1 and 2.47±0.80 g kg −1 of fuel burned, respectively. Average NH 3 and NH x emission factors for agricultural fires in the Southeastern United States were 0.89±0.58 and 1.74±0.92 g kg −1 , respectively. Our data show no clear inverse correlation between modified combustion efficiency (MCE) and NH 3 emissions. The observed NH 3 emissions were significantly higher than measured in previous laboratory experiments in the FIREX FireLab 2016 study.

Laura Tomsche↗