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At least 73 records · Page 4

Soil Biogeochemistry

Depending upon type and pedogenic stage, soils are subject to biotic and abiotic interactions of complex nature depending on type, nature and specific properties. Soil biogeochemistry involves the study of elemental cycling as mediated by complex and inseparable interactions between the biotic (living) and abiotic (non-living) components of soils. Human activities have substantially altered biogeochemical cycling of several key elements including carbon, nitrogen, phosphorus, potassium, and other secondary and minor nutrients over the past few decades, which, in turn, had serious environmental consequences. The present chapter outlines the soil biogeochemical investigations conducted within Indian subcontinent in both natural ecosystems and managed agricultural systems and addresses the state-of-the-art in order to understand the undergoing biogeochemical reactions. Here, we sought to clarify complex interactions generally occurred during biogeochemical transformations of an element (or compound) of interest within the type-specific soil. Further, we emphasized the importance of advancing our understanding of feedback loops in soil biogeochemical processes as altered by anthropogenic perturbations in tropical and sub-tropical soils of India. Overall, this chapter is broadly focused on the nutrient cycling, which is followed by more specific topics like “soil microbiology,” “soil biodiversity,” and “soil biotechnology.”

Sihi, Debjani↗

NASA's surface biology and geology designated observable: A perspective on surface imaging algorithms

The 2017-2027 National Academies' Decadal Survey, Thriving on Our Changing Planet, recommended Surface Biology and Geology (SBG) as a "Designated Targeted Observable" (DO). The SBG DO is based on the need for capabilities to acquire global, high spatial resolution, visible to shortwave infrared (VSWIR; 380 - 2500 nm; ~30 m pixel resolution) hyperspectral (imaging spectroscopy) and multispectral midwave and thermal infrared (MWIR: 3-5 µm; TIR: 8-12 µm; ~60 m pixel resolution) measurements with sub-monthly temporal revisits over terrestrial, freshwater, and coastal marine habitats. To address the various mission design needs, an SBG Algorithms Working Group of multidisciplinary researchers has been formed to review and evaluate the algorithms applicable to the SBG DO across a wide range of Earth science disciplines, including terrestrial and aquatic ecology, atmospheric science, geology, and hydrology. Here, we summarize current state-of-the-practice VSWIR and TIR algorithms that use airborne or orbital spectral imaging observations to address the SBG DO priorities identified by the Decadal Survey: (i) terrestrial vegetation physiology, functional traits, and health; (ii) inland and coastal aquatic ecosystems physiology, functional traits, and health; (iii) snow and ice accumulation, melting, and albedo; (iv) active surface composition (eruptions, landslides, evolving landscapes, hazard risks); (v) effects of changing land use on surface energy, water, momentum, and carbon fluxes; and (vi) managing agriculture, natural habitats, water use/quality, and urban development. We review existing algorithms in the following categories: snow/ice, aquatic environments, geology, and terrestrial vegetation, and summarize the community-state-of-practice in each category. Finally, this effort synthesizes the findings of more than 130 scientists.

54 ENVIRONMENTAL SCIENCES↗

Land use for bioenergy: Synergies and trade-offs between sustainable development goals

Bioenergy aims to reduce greenhouse gas (GHG) emissions and contribute to meeting global climate change mitigation targets. Nevertheless, several sustainability concerns are associated with bioenergy, especially related to the impacts of using land for dedicated energy crop production. Cultivating energy crops can result in synergies or trade-offs between GHG emission reductions and other sustainability effects depending on context-specific conditions. Using the United Nations Sustainable Development Goals (SDGs) framework, the main synergies and trade-offs associated with land use for dedicated energy crop production were identified. Furthermore, the context-specific conditions (i.e., biomass feedstock, previous land use, climate, soil type and agricultural management) which affect those synergies and trade-offs were also identified. The most recent literature was reviewed and a pairwise comparison between GHG emission reduction (SDG 13) and other SDGs was carried out. A total of 427 observations were classified as either synergy (170), trade-off (176), or no effect (81). Most synergies with environmentally-related SDGs, such as water quality and biodiversity conservation, were observed when perennial crops were produced on arable land, pasture or marginal land in the ‘cool temperate moist’ climate zone and ‘high activity clay’ soils. Most trade-offs were related to food security and water availability. Previous land use and feedstock type are more impactful in determining synergies and trade-offs than climatic zone and soil type. This study highlights the importance of considering context-specific conditions in evaluating synergies and trade-offs and their relevance for developing appropriate policies and practices to meet worldwide demand for bioenergy in a sustainable manner.

09 BIOMASS FUELS↗

Influence of shrub willow buffers strategically integrated in an Illinois corn-soybean field on soil health and microbial community composition

We report soil serves many important ecological functions and is an integral part of our existence as a society. However, concerns for soil health are growing globally, in part due to the negative impacts of agricultural management on soil resources. The production of perennial bioenergy crops on marginal land in row-crop production systems is one solution that could improve land-use efficiency and address the sustainability of cropland management. Because the relationship between crop management and the environment is complex, more research is needed to evaluate the potential benefits perennial bioenergy crop production has on soil health, as well as other ecosystem services. In this study, shrub willow buffers were strategically integrated into a corn-soybean cropping system with the main objective of reducing nitrate-N leaching from grain crop production while producing biomass for bioenergy. Two buffer systems (defined by landscape positions) were included for comparison, one on marginal land with exposure to nitrate-N leaching from upslope grain (southern plots) and one on fertile soils with less nitrate-N leaching potential (northern plots). Evaluation of soil (chemistry, bulk density, microbial community) and shrub willow vegetation properties ( fine roots, leaf litter decomposition, and nutrient uptake dynamics), showed that landscape position plays an important role in (1) the dynamics of soil chemical properties, (2) shrub willow's influence and productivity, and (3) the provision of additional ecosystem services such as reductions in nitrous oxide emissions and nitrate-N leaching. In addition, the combination of crop type and landscape position (N-grain, N-willow, S-grain, and S-willow) influenced the species composition of the soil microbial community, resulting in unique and identifiable communities. These results highlight the potential application of shrub willow buffers for ecosystem service provision and support of ecosystem processes; however, understanding the relationship between the microbial community, crop type, and landscape is important for understanding the sustainability of the design.

54 ENVIRONMENTAL SCIENCES↗

A comprehensive analysis of the crop effect on the urban-rural differences in land surface phenology

The response of land surface phenology (LSP) to the urban heat island effect (UHI) is a useful biological indicator for understanding how vegetated ecosystems will be affected by future climate warming. However, vegetation cover in rural areas is often dominated by cultivated land, whose phenological timing is considerably influenced by agricultural managements (e.g., timing of sowing and harvesting), leading to biased conclusions derived from the urban-rural LSP differences. To demonstrate this problem, we investigated the crop influence on the phenological response to a warmer environment resulting from the UHI effect. We partitioned cities in the United States into cultivated and non-cultivated categories according to the proportion of crops in rural areas. We then built continuous buffer zones starting from the urban boundary to explore the urban-rural LSP differences considering the UHI effect on them. In this work, the results suggest crop inclusion is likely to lead to >14 days of urban-rural differences at both the start of the season (SOS) and the end of the season (EOS) between cultivated and non-cultivated cities. The temperature sensitivity (ST) of SOS is overestimated by approximately 2.7 days/°C, whereas the EOS is underestimated by 3.6 days/°C. Removing crop-dominated pixels (i.e., above 50 %) can minimize the influence of crop planting/harvesting on LSP and derive reliable results. We, therefore, suggest explicit consideration of crop impacts in future studies of phenological differences between urban and rural areas and the UHI effect on LSP in urban domains, as presented by this comprehensive study.

54 ENVIRONMENTAL SCIENCES↗

Global stocks and capacity of mineral-associated soil organic carbon

Abstract Soil is the largest terrestrial reservoir of organic carbon and is central for climate change mitigation and carbon-climate feedbacks. Chemical and physical associations of soil carbon with minerals play a critical role in carbon storage, but the amount and global capacity for storage in this form remain unquantified. Here, we produce spatially-resolved global estimates of mineral-associated organic carbon stocks and carbon-storage capacity by analyzing 1144 globally-distributed soil profiles. We show that current stocks total 899 Pg C to a depth of 1 m in non-permafrost mineral soils. Although this constitutes 66% and 70% of soil carbon in surface and deeper layers, respectively, it is only 42% and 21% of the mineralogical capacity. Regions under agricultural management and deeper soil layers show the largest undersaturation of mineral-associated carbon. Critically, the degree of undersaturation indicates sequestration efficiency over years to decades. We show that, across 103 carbon-accrual measurements spanning management interventions globally, soils furthest from their mineralogical capacity are more effective at accruing carbon; sequestration rates average 3-times higher in soils at one tenth of their capacity compared to soils at one half of their capacity. Our findings provide insights into the world’s soils, their capacity to store carbon, and priority regions and actions for soil carbon management.

54 ENVIRONMENTAL SCIENCES↗

Composition and metabolism of microbial communities in soil pores

Delineation of microbial habitats within the soil matrix and characterization of their environments and metabolic processes are crucial to understand soil functioning, yet their experimental identification remains persistently limited. We combined single- and triple-energy X-ray computed microtomography with pore specific allocation of 13 C labeled glucose and subsequent stable isotope probing to demonstrate how long-term disparities in vegetation history modify spatial distribution patterns of soil pore and particulate organic matter drivers of microbial habitats, and to probe bacterial communities populating such habitats. Here we show striking differences between large (30-150 µm Ø) and small (4-10 µm Ø) soil pores in (i) microbial diversity, composition, and life-strategies, (ii) responses to added substrate, (iii) metabolic pathways, and (iv) the processing and fate of labile C. We propose a microbial habitat classification concept based on biogeochemical mechanisms and localization of soil processes and also suggests interventions to mitigate the environmental consequences of agricultural management.

59 BASIC BIOLOGICAL SCIENCES↗

Partners in root nodule symbiosis respond uniquely to heavy metal stresses in a host genotype-dependent manner

Abstract The mutualistic symbiosis between legume roots and soil rhizobia culminates in the formation of root nodules, where nitrogen is fixed. Root nodule symbiosis is inhibited by heavy metal stress. In this study, we investigated the relative responses of the symbiotic partners to a non-essential heavy metal cadmium (Cd) and an essential heavy metal zinc (Zn) stress and identified patterns in gene expression. We performed dual transcriptomics in nodules, using theMedicago truncatula-Sinorhizobium melilotisymbiotic system. Phenotypes were measured in the wild-typeMedicago truncatulaand a mutant in anABCtransporter gene (Mtabcg36), which showed compromised nodule formation in control conditions and further after heavy metal treatment. We observed that the rhizobia were particularly sensitive to Zn in mutant nodules. The greatest degree of differential gene expression in the host plant were observed under Cd and Zn treatments in wild-type nodules. Most Cd-regulated host genes were also differentially regulated by Zn, revealing little discernment between an essential and a non-essential ion under increased exposure. Furthermore, the host response to both the stresses affected auxin and iron homeostasis genes in a host genotype-dependent manner. Our results suggested impaired cadmium export from the mutant nodules. These results have potential implications in agricultural management systems and bioremediation strategies.

Science & Technology - Other Topics↗

Varied farm-level carbon intensities of corn feedstock help reduce corn ethanol greenhouse gas emissions

Abstract A reduction in the overall carbon intensity (CI) of a crop-based biofuel can be achieved by cutting down the CI of the biofuel’s feedstock, which in turn correlates significantly to agricultural management practices. Proposals are being made to incentivize low-carbon biofuel feedstocks under U.S. fuel regulatory programs to promote sustainable farming practices by individual farms. For such an incentive scheme to function properly, robust data collection and verification are needed at the farm level. This study presents our collaboration with U.S. private sector companies to collect and verify the corn production data necessary for feedstock-specific CI calculation at the farm level, through a carefully designed questionnaire, to demonstrate the practicality and feasibility of data collection at scale. We surveyed 71 farms that produced 0.2 million metric tons of corn grain in 2018 in a Midwestern U.S. state to obtain information on key parameters affecting corn ethanol feedstock CI, such as grain yields, fertilizer/chemical application rates, and agronomic practices. Feedstock-specific CI was calculated in the unit of grams (g) CO 2 equivalent (CO 2 e) of greenhouse gases per kilogram (kg) of corn produced. Results showed large CI variations—from 119 to 407 g CO 2 e kg −1 of corn—due to the farm-level inventory, while the production-weighted average CI for all surveyed farms was 210 g CO 2 e kg −1 , comparable to the national average CI of 204 g CO 2 e kg −1 . The nitrogen fertilizer type applied and rate were identified as key factors contributing most to CI variations at the farm level. The estimated N 2 O emissions from fertilizer and biomass nitrogen inputs to soil accounted for 51% of the overall farm-level CI and therefore need to be better monitored at farm level with high resolution. We concluded that this feedstock-specific, farm-level CI evaluation has the potential to be used to incentivize low-carbon feedstock for biofuel production.

54 ENVIRONMENTAL SCIENCES↗

Viruses of Nitrogen-Fixing Mesorhizobium Bacteria in Globally Distributed Chickpea Root Nodules

Legume nodules are specialized environments on plant roots that are induced and dominated by nitrogen-fixing bacteria. Bacteriophages (phages) in these nodules could potentially provide top-down controls on the population size and, therefore, the function of nitrogen-fixing symbionts. Here we sought to characterize the diversity and biogeographical patterns of phages that infect nitrogen-fixing Mesorhizobium symbionts isolated from root nodules, leveraging 266 genomes of Mesorhizobium isolated from nodules and 648 nodule metagenomes collected from three species of chickpea plants ( Cicer spp.) under different agricultural management practices, spanning eight countries on five continents. We identified 106 phage populations (viral operational taxonomic units [vOTUs]) in Mesorhizobium draft genomes, 37% of which were confirmed as likely prophages. These vOTUs were detected in 64% of the Mesorhizobium-dominated nodule metagenomes and 58% of the Mesorhizobium isolates. Per metagenome, 1 to 16 putative Mesorhizobium vOTUs were detected, with more than half of the nodules containing only one such vOTU. The majority of vOTUs were detected exclusively in Ethiopia, followed by India and Morocco, with the lowest richness of putative Mesorhizobium phages in countries that applied industrial Mesorhizobium inoculants to crops. Two vOTUs were identified in five or more countries and in nodules dominated by different strains of Mesorhizobium, suggesting infection of diverse Mesorhizobium hosts and long-term interactions. Beta-diversity of these Mesorhizobium phage assemblages was significantly correlated with the dominant Mesorhizobium strain, but not with measured environmental parameters. Our findings indicate that nitrogen-fixing nodules in chickpea plants can contain distinct viral assemblages, with potential impacts on the nodule microbiome that bear further exploration.

Microbiology↗

Space and Time Dynamics of Transpiration in the East River Watershed: Biotic and Abiotic Controls

Alpine forests have important impacts on water resources by affecting how much of the precipitation that falls on a watershed is routed to streamflow or returned to the atmosphere as transpiration – so-called “green water”. In many of the high-altitude watersheds that supply critical water resources to the western US, it remains a challenge to predict how much water forests will utilize limiting the ability to predict both short and long term information on downstream water resources. The uncertainty emerges because transpiration varies between tree species, across landscapes and over time in ways that cannot readily be predicted from physically-based models for evaporation. In this project, we utilized a technique called sap flux to measure the rate of water use for three common species of fir, spruce and aspen distributed across a hillslope in the East River Watershed from 2019-2021. We also made ~weekly measurements of the concentration of stable isotopic tracers in transpiration to understand not only how much water was being used but whether it originated from summer rain or snowmelt. Firstly, our results show that the species tend to use similar amounts of total water but they achieve this similar cumulative water flux both by using water at different times of the year and by using different water sources. This shows the importance of including species-level information into models used to make seasonal streamflow predictions. Secondly, our results show that trees lower on the hillslope use older waters all through the summer whereas trees higher on the hillslope rely more heavily on recent summer rain. This means trees lower on the hillslope are less sensitive to year-to-year changes in summer climate. Lastly, we found that sites with dense forest stands displayed the largest amounts of year-to-year changes in transpiration and thus these high localized spots in the watershed are the primary drivers of changes in “green water” use. The results provide an unprecedented spatial and temporal picture of forest water use that confirms a number of fundamental hypotheses on hillslope ecohydrology that had not previously been tested against observations. Predictions of streamflow that will benefit from this work are highly valuable for agriculture management, flood control and ecological restoration efforts.

54 ENVIRONMENTAL SCIENCES↗

Validation of the Community Land Model Version 5 over the Contiguous United States (CONUS) using in-situ and remote sensing datasets

The Community Land Model (CLM) is an effective tool to simulate the biophysical and biogeochemical processes and their interactions with the atmosphere. Although CLM Version 5 (CLM5) constitutes various updates in these processes, its performance in simulating energy, water and carbon cycles over the Contiguous United States (CONUS) at scales which land surface changes and hydrometeorological and hydroclimatological applications are more locally relevant is yet to be assessed. In this study, we conducted three simulations at 0.125? during 1979-2018 over the CONUS using different configurations of CLM, namely CLM5-biogeochemistry (CLM5BGC), CLM4.5BGC, and CLM5-satellite phenology (CLM5SP). We validated and compared their simulations against multiple remote-sensed and in-situ datasets. Overall, the parametric and structural updates (e.g., carbon cost for nitrogen uptake, variable soil thickness, dry surface layer) in CLM5 improve its ability in capturing terrestrial biogeochemical dynamics. The low evapotranspiration in CLM5BGC is associated with biases in simulating vegetation phenological characteristics rather than soil water limitations. The mismatch between CLM5BGC-simulated peak leaf area index and reference data can be attributed to CLM5BGC's inability in simulating phenology of trees and grasses. The differences between CLM-simulated irrigation and reference estimates can be attributed to differences between processes represented in models and in reality, and uncertainties in input and validation datasets. Evaluation against observations at small catchments suggest that hydrologic parameters needed to be calibrated to improve simulations of runoff, especially subsurface runoff. Additional efforts are needed to incorporate spatially-distributed plant phenology and physiology parameters and regional-specific agricultural management practices (e.g., planting, harvest).

54 ENVIRONMENTAL SCIENCES↗

Call for Participation: Collaborative Benchmarking of Functional-Structural Root Architecture Models. The Case of Root Water Uptake

Three-dimensional models of root growth, architecture and function are becoming important tools that aid the design of agricultural management schemes and the selection of beneficial root traits. However, while benchmarking is common in many disciplines that use numerical models, such as natural and engineering sciences, functional-structural root architecture models have never been systematically compared. The following reasons might induce disagreement between the simulation results of different models: different representation of root growth, sink term of root water and solute uptake and representation of the rhizosphere. Presently, the extent of discrepancies is unknown, and a framework for quantitatively comparing functional-structural root architecture models is required. We propose, in a first step, to define benchmarking scenarios that test individual components of complex models: root architecture, water flow in soil and water flow in roots. While the latter two will focus mainly on comparing numerical aspects, the root architectural models have to be compared at a conceptual level as they generally differ in process representation. Therefore, defining common inputs that allow recreating reference root systems in all models will be a key challenge. In a second step, benchmarking scenarios for the coupled problems are defined. We expect that the results of step 1 will enable us to better interpret differences found in step 2. This benchmarking will result in a better understanding of the different models and contribute toward improving them. Improved models will allow us to simulate various scenarios with greater confidence and avoid bugs, numerical errors or conceptual misunderstandings. This work will set a standard for future model development.

Plant Sciences↗

Novel Application of Hybrid Anion Exchange Resin for Phosphate Desorption Kinetics in Soils: Minimizing Re-Adsorption of Desorbed Ions

The process of phosphate desorption from soils is difficult to measure using stirred batch techniques because of the accumulation of desorbed ions in a bathing solution. To accurately measure the apparent rate coefficient of phosphate desorption from soils, it is necessary to remove the desorbed ions. In this study, a novel hybrid (i.e., iron oxide coated) anion exchange resin was used as a sink to study long-term (seven days) P desorption kinetics in intensively managed agricultural soils in the Midwestern U.S. (total phosphorus (TP): 196–419 mg/kg). The phosphate desorption kinetics in the hybrid anion exchange resin method were compared with those in the other conventional batch desorption method with pure anion exchange resins or without any sink. The extent of P desorption in the hybrid resin methods was >50% of total desorbed phosphate in the other methods. The initial kinetic rate estimated in the pseudo-second-order kinetic model was also highest (3.03–31.35 mg/(g·hr)) in the hybrid resin method when the same soil system was compared. This is because adsorbed P in the hybrid resins was nearly irreversible. The hybrid anion exchange resin might be a new and ideal sink in measuring the P desorption process in soils and sediments

54 ENVIRONMENTAL SCIENCES↗

Invertebrate and Plant Community Diversity of an Illinois Corn–Soybean Field with Integrated Shrub Willow Bioenergy Buffers

Perennial bioenergy crop production within intensively managed agricultural landscapes has the potential to improve the sustainability, resiliency, and diversity of these landscapes. Perennial crops are ideal because of their high production potential on marginal lands relative to grain crops (e.g., corn and soybean) and their ability to provide additional ecosystem service benefits. When agricultural landscapes are designed to target specific services, determining the non-targeted services of perennial bioenergy crops can further promote their adoption. This 3-year study addresses this proposition by evaluating the canopy invertebrates and understory plant (non-target crop) communities using bee bowls and point measurement of ground coverage, respectively, within a grain field integrated with shrub willow buffer systems designed for nutrient loss reduction. Greater plant diversity and richness were observed under willow than under grain, resembling that of the surrounding riparian community with more perennial, native species. However, the same relationship did not hold true for invertebrates, with seasonality having a significant influence resulting in similar communities observed in willow and grain plots. The presence of unique plant and invertebrate species in both willow and grain crops as well as foraging pollinators on both crop and non-target crop species highlights the importance of habitat heterogeneity for supporting biodiversity and the potential benefits of buffer bioenergy landscape designs.

09 BIOMASS FUELS↗

User benefits and funding strategies

The justification, economic and technological benefits of NASA Space Programs (aside from pure scientific objectives), in improving the quality of life in the United States is discussed and outlined. Specifically, a three-step, systematic method is described for selecting relevant and highly beneficial payloads and instruments for the Interim Upper Stage (IUS) that will be used with the space shuttle until the space tug becomes available. Viable Government and private industry cost-sharing strategies which would maximize the number of IUS payloads, and the benefits obtainable under a limited NASA budget were also determined. Charts are shown which list the payload instruments, and their relevance in contributing to such areas as earth resources management, agriculture, weather forecasting, and many others.

Archer, J. L.↗

A project to evaluate moisture stress in corn and soybean areas of western and southwestern Minnesota

Remote sensing techniques, particularly LANDSAT data, were used to assess soil moisture stress through crop signature in southwestern Minnesota. Related objectives were: localization of droughty, well drained, and poorly drained soils; detection of stress from hail, wind, and disease damage; and the use of remote sensing data for agricultural management. Since the amount and distribution of precipitation were adequate during the 1977 and 1978 growing seasons, no significant stress occurred. Crop conditions were very favorable. As a result, crop signatures were too uniform to reflect soilscape variations and crop condition changes. In 1979 precipitation was again adequate to excess, particularly in June and August. In some cases, poorly drained sites especially, stress conditions developed as a result of excess of water and could be identified on color infrared photographs.

Rust, R. H.↗