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At least 73 records · Page 4

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DOE OSTI2025

Structural basis for sensitivity and acquired resistance of fungal cap guanine-N7 methyltransferases to the antifungal antibiotic sinefungin

Abstract The essential enzyme messenger RNA (mRNA) (guanine-N7) methyltransferase catalyzes S-adenosylmethionine (SAM)-dependent conversion of GpppRNA ends to the m7GpppRNA cap structure characteristic of eukaryal mRNAs. The antibiotic sinefungin (SFG) is a SAM analog in which the S-CH3 sulfonium moiety of SAM is replaced by a C-NH2 amine. Available evidence indicates that the antifungal activity of SFG is exerted via inhibition of fungal cap methyltransferase Abd1. Here we report that recombinant Kluyveromyces lactis and Saccharomyces cerevisiae Abd1 are 240-fold and 485-fold more sensitive to inhibition by SFG than by the reaction product S-adenosylhomocysteine (SAH). Crystal structures of K. lactis and S. cerevisiae Abd1 as binary complexes with SAH or SFG and ternary complexes with GTP•SFG highlight how SFG makes two hydrogen bonds from its C-NH2 amine to the guanine-O6 and -N7 atoms of GTP that account for its higher affinity vis-à-vis SAH and SAM. Through a genetic screen to isolate SFG-resistant S. cerevisiae strains, a conserved tyrosine (Tyr416) that interacts with the cap guanine in Abd1 was identified as a key determinant of SFG potency. Tyr416 Abd1 variants confer SFG resistance in vitro by weakening cap-assisted SFG interactions with Abd1. Our study illuminates the basis for the exquisite SFG sensitivity of fungal cap methyltransferases.

Biochemistry & Molecular Biology↗

DOE OSTI2024

Capping Effects on Spin and Charge Excitations in Parent and Superconducting Nd 1-x Sr x⁢ NiO 2

Superconductivity in infinite layer nickelates Nd 1-x⁢ Sr x NiO 2 has so far been achieved only in thin films, raising questions on the role of substrates and interfaces. Given the challenges associated with their synthesis it is imperative to identify their intrinsic properties. We use resonant inelastic x-ray scattering to investigate the influence of the SrTiO 3 capping layer on the excitations of Nd 1-x ⁢Sr x⁢ NiO 2 (x =0 and 0.2). Spin excitations are observed in parent and 20% doped Nd 1-x Sr x ⁢NiO 2 regardless of capping, proving that magnetism is intrinsic to infinite-layer nickelates and appears in a significant fraction of their phase diagram. In parent and superconducting Nd 1-x Sr x ⁢NiO 2 , the spin excitations are slightly hardened in capped samples compared to the noncapped ones. Additionally, a weaker Ni-Nd charge transfer peak at ~0.6 eV suggests that the hybridization between Ni 3⁢d and Nd 5⁢d orbitals is reduced in capped samples. In conclusion, from our data, capping induces only minimal differences in Nd 1-x Sr x NiO 2 and we phenomenologically discuss these differences based on the reconstruction of the SrTiO 3 -NdNiO 2 interface and other mechanisms such as crystalline disorder.

36 MATERIALS SCIENCE↗

NASA NTRS1973

The red polar caps of Io

An excellent series of Jupiter photographs obtained on August 9, 1973 showed Io to have red-brown polar caps, with the South Cap substantially larger than the North Cap. Reproductions are shown in the color Plate. The polar caps stand out by the color contrast against a white-bluish zone of Jupiter. When projected against a brown belt, only the truncated brighter equatorial region of the satellite is seen. Some 1968 images of Io also show the color of the polar caps directly.

Minton, R. B.↗

NASA NTRS1973

The nonuniform recession of the south polar cap of Mars

The nature of the irregular springtime recession of the Martian polar caps is investigated, with particular reference to the southern polar cap. Our current knowledge about the composition of the caps is outlined, and the historical record of their springtime recession is reviewed. An attempt is made to correlate the irregularities of the recession pattern of the southern polar cap with the features of the terrain revealed by Mariner 9 photography at a time when the southern cap was at its minimum extent. The results are interpreted in terms of the physical and meteorological processes active in the polar regions.

Veverka, J.↗

NASA NTRS1973

The red polar caps of Io

Minton, R. B.↗

NASA NTRS1974

The nature of the residual Martian polar caps

A model of the behavior of the Martian polar caps is described which incorporates the heating effects of the atmosphere, as well as insolation and conduction. This model is used to try to match the observed regression curves of the polar caps, and it predicts that all the seasonally condensed CO2 will be lost by around the summer solstice. The implication is that the residual caps are composed of water ice which, it is found by further modeling, should be stable during the Martian summers. However, it is also argued that this model may be too simplistic, and that the effects of wind in redistributing the seasonal condensate may lead to sufficient thicknesses of CO2 in the central polar region to allow the year-long existence of CO2 without significantly changing the retreat characteristics of the cap, and it is, therefore, concluded that at the present, the nature of the residual caps cannot be reliably determined.

Briggs, G. A.↗

NASA NTRS1979

A numerical model of the Martian polar cap winds

An investigation of the Martian polar cap winds and their response to a variety of factors is carried out by numerical experiments based on a zonally symmetric primitive equation model. The seasonal thermal forcing, mass exchange between polar caps and atmosphere, large-scale topography, and polar cap size are discussed, noting that topography has a small effect, but the circulation intensity increases with cap size. The model results show that surface winds near the edge of a retreating polar cap are enhanced, and that the surficial wind indicators near the south pole are formed during spring and those near the north pole during winter. It is suggested that the high-latitude dune fields in the northern hemisphere are formed when the terrain is covered by frost, and that the saltating particles are 'snowflakes' which formed by the mechanism proposed by Pollack (1976). The model results for the winter simulation compare favorably with general circulation model (GCM) calculations.

Haberle, R. M.↗

NASA NTRS1981

Ellipsoidal corrections for geoid undulation computations using gravity anomalies in a cap

Ellipsoidal correction terms have been derived for geoid undulation computations when the Stokes equation using gravity anomalies in a cap is combined with potential coefficient information. The correction terms are long wavelength and depend on the cap size in which its gravity anomalies are given. Using the regular Stokes equation, the maximum correction for a cap size of 20 deg is -33 cm, which reduces to -27 cm when the Stokes function is modified by subtracting the value of the Stokes function at the cap radius. Ellipsoidal correction terms were also derived for the well-known Marsh/Chang geoids. When no gravity was used, the correction could reach 101 cm, while for a cap size of 20 deg the maximum correction was -45 cm. Global correction maps are given for a number of different cases. For work requiring accurate geoid computations these correction terms should be applied.

Rapp, R. H.↗

NASA NTRS1982

DE-2 photoelectron measurements consistent with a large scale parallel electric field over the polar cap

Winningham and Heikkila (1974) presented observations of various polar cap particle morphologies. They interpreted observations of 'anomalous' photoelectron angular distribution over the polar caps to be indicative of a large scale, outwardly directed, parallel electric field over the polar cap. The parallel field was observed to be spatially and/or temporarily variable. However, results obtained by Winningham and Heikkila have one weakness, which is related to the lack of simultaneous observations at many pitch angles. The present investigation is, therefore, concerned with the presentation of results from Dynamics Explorer 2 (DE-2) which confirm the experimental results of Winningham and Heikkila. It is concluded that the earth's polar caps act much like any conductor immersed in a plasma and illuminated by sunlight. DE-1 and DE-2 would then represent tiny point probes examining the internal details in the sheath region of the polar cap.

Winningham, J. D.↗

NASA NTRS1986

Reinforcement of composite laminate free edges with U-shaped caps

Generalized plane strain finite element analysis is used to predict reduction of interlaminar normal stresses when a U-shaped cap is bonded to the edge of a laminate. Three-dimensional composite material failure criteria are used in a progressive laminate failure analysis to predict failure loads of laminates with different edge cap designs. In an experimental program, symmetric 11-layer graphite-epoxy laminates with a one-layer cap of Kevlar-epoxy cloth are shown to be 130 to 140 percent stronger than uncapped laminates under static tensile and tension-tension fatigue loading. In addition, the coefficient of variation of the static tensile failure load decreases from 24 to 8 percent when edge caps are added. The predicted failure load calculated with the finite element results is 10 percent lower than the actual failure load. For both capped and uncapped laminates, actual failure loads are much lower than those predicted using classical lamination theory stresses and a two-dimensional failure criterion. Possible applications of the free edge reinforcement concept are described, and future research is suggested.

Howard, W. E.↗

NASA NTRS1986

Measurements of the north polar cap of Mars and the earth's Northern Hemisphere ice and snow cover

The boundaries of the polar caps of Mars have been measured on more than 3000 photographs since 1905 from the plate collection at the Lowell Observatory. For the earth, the polar caps have been accurately mapped only since the mid 1960s when satellites were first available to synoptically view the polar regions. The polar caps of both planets wax and wane in response to changes in the seasons, and interannual differences in polar cap behavior on Mars as well as earth are intimately linked to global energy balance. Data on the year to year variations in the extent of the north polar caps of Mars and earth have been assembled and compared, although only 6 years of concurrent data were available for comparison.

Foster, J.↗

NASA NTRS1987

Composite Piston-Cap Structure

Design eliminates thermal stress between composite cap and metal piston. New, conically surfaced, composite piston-cap structure, passively retained in metallic piston, made from carbon/carbon material, machined to shape. Shape includes conical faces, conical extensions intersect at common vertex on cylindrical axis of piston body, allowing thermal-stress-free retention of cap at all temperatures. When assembly heated or cooled, metal expands or contracts radially from coincident vertex. Where metal makes contact with carbon/carbon cap, snugly fitting conical faces slide without interference. Since metal body free to expand, no thermal stress produced in metal body or carbon/carbon cap.

Taylor, Allan↗

NASA NTRS1989

Initial application of CAP-TSD to wing flutter

The initial application of the CAP-TSD computer program for wing flutter analysis is presented. Computational Aeroelasticity Program - Transonic Small Disturbance (CAP-TSD) is based on an approximate factorization (AF) algorithm that is stable and efficient on supercomputers with vector arithmetic. CAP-TSD was used to calculate steady and unsteady pressures on wings and configurations at subsonic, transonic, and supersonic Mach numbers. However, the CAP-TSD code has been developed primarily for aeroelastic analysis. The initial efforts for validation of the aeroelastic analysis capability is presented. The initial applications include two series of symmetric, planar wing planforms. Well defined modal properties are available for these wings. In addition, transonic flutter boundaries are available for evaluation of the transonic capabilities of CAP-TSD.

Cunningham, Herbert J.↗

NASA NTRS1992

Sunlight penetration through the Martian polar caps: Effects on the thermal and frost budgets

An energy balance model of the seasonal polar caps on Mars is modified to include penetration of solar radiation into and through the ice. Penetration of solar radiation has no effect on subsurface temperature or total frost sublimation if seasonal ice overlies a dust surface. An effect is noted for seasonal ice which overlies the residual polar caps. For the case of an exposed water-ice residual polar cap, the temperature at depth is calculated to be up to several degrees warmer and the calculated lifetime of seasonal CO2 frost is slightly lower when penetration of sunlight is properly treated in the model. For the case of a residual polar cap which is perennially covered by CO2 frost, the calculated lifetime of seasonal CO2 frost is very slightly increased as a result of sunlight penetration through the ice. Hence, penetration of sunlight into the ice helps to stabilize the observed dichotomy in the residual polar caps on Mars, although it is a small effect.

Lindner, Bernhard Lee↗

NASA NTRS1992

Sunlight penetration through the Martian polar caps - Effects on the thermal and frost budgets

An energy balance model of the seasonal polar caps on Mars is modified to include penetration of solar radiation into and through the ice. Penetration of solar radiation has no effect on subsurface temperature or total frost sublimation if seasonal ice overlies a dust surface. An effect is noted for seasonal ice which overlies the residual polar caps. For the case of an exposed water-ice residual polar cap, the temperature at depth is calculated to be up to several degrees warmer, and the calculated lifetime of seasonal CO2 frost is slightly lower when penetration of sunlight is properly treated in the model. For the case of a residual polar cap which is perennially covered by CO2 frost, the calculated lifetime of seasonal CO2 frost is very slightly increased as a result of sunlight penetration through the ice. Hence, penetration of sunlight into the ice helps to stabilize the observed dichotomy in the residual polar caps on Mars, although it is a small effect.

Lindner, Bernhard L.↗

NASA NTRS1992

The polar cap structure of the X-ray pulsar 4U 1538 - 52

We compare the pulse-phase-dependent spectral observations of 4U 1538 - 52 obtained from Ginga to a series of static model atmospheres of curved accreting polar caps, utilizing a magnetized radiative transfer code with relativistic polarized cross sections. A chi-squared fit was performed on the symmetrized pulse shapes, allowing the parameters of the two polar caps to vary independently. We find evidence for a significant difference between the caps, both in terms of opening angle and temperature, while the optical depth is similar and compatible with radiative deceleration models. The polar caps appear larger than what is usually estimated from dipole fields, and are not located at the antipodes of each other. A broader distribution of magnetic fields is required than expected from a dipolar field at constant radius. If the magnetic field is indeed dipolar, it should be off-center in respect to the star and the accretion shock height exhibits an unusual dependence on the polar angle. An alternative possibility is that the magnetic field is disordered on scales small compared to the polar cap radius.

Bulik, T.↗

NASA NTRS1992

Benzonorbornadiene end caps for PMR resins

Several ortho-disubstituted benzonorbornadiene derivatives are described. These molecules contain acid, ester, or anhydride functionality permitting their use as end caps in PMR (polymerization of monomer reactants) polyimide systems. The replacement of the currently used norbornenyl end caps with benzonorbornadienyl end caps affords resins of increased aromatic content. It also allows evaluation of some mechanistic aspects of PMR cross-linking. Initial testing of N-phenylimide model compounds and of actual resin formulations using the benzonorbornadienyl end cap reveals that they undergo efficient thermal crosslinking to give oligomers with physical properties and thermal stability comparable to commercial norbornene-end-capped PMR systems.

Panigot, Michael J.↗

NASA NTRS1994

A Cost and Performance System (CAPS) in a Federal agency

Cost and Performance System (CAPS) is an automated system used from the planning phase through implementation to analysis and documentation. Data is retrievable or available for analysis of cost versus performance anomalies. CAPS provides a uniform system across intra- and international elements. A common system is recommended throughout an entire cost or profit center. Data can be easily accumulated and aggregated into higher levels of tracking and reporting of cost and performance.The level and quality of performance or productivity is indicated in the CAPS model and its process. The CAPS model provides the necessary decision information and insight to the principal investigator/project engineer for a successful project management experience. CAPS provides all levels of management with the appropriate detailed level of data.

Huseonia, W. F.↗