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At least 73 records · Page 4

NASA Satellites and Data Fusion: A Case Study with Coral Reefs

As the world is experiencing a significant rise in both AI, Climate, and Space start-up companies, we are in a new wave of limitless innovation. NASA's statutory responsibility is to "provide for the widest practicable and appropriate dissemination of information concerning its activities and the results thereof." (51 U.S.C. § 20112) In particular, through machine learning, the public data drawn from NASA’s space assets can provide insights for addressing climate-related problems here on Earth. And many climate start-up companies can benefit from leveraging this data, either for proof of concepts or their own missions. In the Fall of 2021, several scientists from NASA and Coral Vita led a Practicum with the Georgia Institute of Technology Masters in Data Analytics program. The Practicum saw two teams of students develop and implement machine learning models to infer, from CALIPSO satellite imagery, vitality properties upon satellite pass. This kind of capability can lead to real-time mapping of coral health around the world, giving organization an understanding of where to prioritize reef reconstitution.. In this presentation, we will highlight this use case and discuss other concrete applications in which space data is used to solve problems here on Earth.

Earth Sciences↗

Mineralized sclerites in the gorgonian coral Leptogorgia chilensis as a natural jamming system

The soft corals (Cnidaria, Octocorallia), a diverse group of colonial marine invertebrates, can reversibly tune their body stiffness in response to external stimuli. This capability is attributed to their dynamic skeletal systems, which consist of thousands of mineralized skeletal elements, called sclerites, embedded within a gel-like matrix that swells/deswells and unjams/jams the sclerites, thus modulating skeletal stiffness. While sclerite morphology is widely used for species identification, its role in the mechanical performance of a soft coral’s skeletal system is largely unknown. Here, we investigated structure-jamming relationships in sclerite-based skeletal architectures using the red gorgonian octocoral Leptogorgia chilensis as a model system. The sclerites of L. chilensis exhibit a shaft-like geometry with two axial branches and two sets of triradiate side branches, which are aligned with the crystallographic symmetry of the constituent magnesium-containing calcite. By combining multiscale three-dimensional (3D) structural characterization, parametric geometrical modeling, 3D printing, mechanical testing, and discrete element simulations, we demonstrate how sclerite geometry achieves a balanced jamming performance in terms of stiffness, weight, strength, and fracture resistance in comparison to alternative geometries parametrically modified from the native sclerites (e.g., changes in the length and number of side branches). Here, we also found that these performance metrics are achieved through the effective interlocking among side and axial branches, which is further enhanced by the fractal-like microscopic spikes on the branch tips. The findings in this natural jamming system offer insights for designing synthetic mechanotunable material architectures for a wide range of applications, from soft robotics to mechanical dampeners.

36 MATERIALS SCIENCE↗

Applying Tafkaa For Atmospheric Correction of Aviris Over Coral Ecosystems In The Hawaiian Islands

Growing concern over the health of coastal ecosystems, particularly coral reefs, has produced increased interest in remote sensing as a tool for the management and monitoring of these valuable natural resources. Hyperspectral capabilities show promising results in this regard, but as yet remain somewhat hindered by the technical and physical issues concerning the intervening water layer. One such issue is the ability to atmospherically correct images over shallow aquatic areas, where complications arise due to varying effects from specular reflection, wind blown surface waves, and reflectance from the benthic substrate. Tafkaa, an atmospheric correction algorithm under development at the U.S. Naval Research Laboratory, addresses these variables and provides a viable approach to the atmospheric correction issue. Using imagery from the Advanced Visible InfraRed Imaging Spectrometer (AVIRIS) over two shallow coral ecosystems in the Hawai ian Islands, French Frigate Shoals and Kane ohe Bay, we first demonstrate how land-based atmospheric corrections can be limited in such an environment. We then discuss the input requirements and underlying algorithm concepts of Tafkaa and conclude with examples illustrating the improved performance of Tafkaa using the same AVIRIS images.

Goodman, James A.↗

Coral Reef Remote Sensing using Simulated VIIRS and LDCM Imagery

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM) might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA's ICON/CREWS DST.

Estep, Leland↗

Coral Reef Remote Sensing Using Simulated VIIRS and LDCM Imagery

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems-the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM)- might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA s ICON/CREWS DST.

Estep, Leland↗

Coral Reef Annihilation, Persistence and Recovery at Earth’s Youngest Volcanic Island

The structure and function of coral reef ecosystems is increasingly compromised by multiple stressors, even in the most remote locations. Severe, acute disturbances such as volcanic eruptions represent extreme events that can annihilate entire reef ecosystems, but also provide unique opportunities to examine ecosystem resilience and recovery. Here, we examine the destruction, persistence and initial recovery of reefs associated with the hydromagmatic eruption that created Earth’s newest landmass, the Hunga Tonga–Hunga Ha’apai volcanic island. Despite extreme conditions associated with the eruption, impacts on nearby reefs were spatially variable. Importantly, even heavily affected reefs showed signs of rapid recovery driven by high recruitment, likely from local refuges. The remote location and corresponding lack of additional stressors likely contribute to the resilience of Hunga’s reefs, suggesting that in the absence of chronic anthropogenic stressors, coral reefs can be resilient to one of the largest physical disturbances on Earth.

Refuge population↗

NeMO-Net – The Neural Multi-Modal Observation & Training Network for Global Coral Reef Assessment

We present NeMO-Net, the Srst open-source deep convolutional neural network (CNN) and interactive learning and training software aimed at assessing the present and past dynamics of coral reef ecosystems through habitat mapping into 10 biological and physical classes. Shallow marine systems, particularly coral reefs, are under significant pressures due to climate change, ocean acidification, and other anthropogenic pressures, leading to rapid, often devastating changes, in these fragile and diverse ecosystems. Historically, remote sensing of shallow marine habitats has been limited to meter-scale imagery due to the optical effects of ocean wave distortion, refraction, and optical attenuation. NeMO-Net combines 3D cm-scale distortion-free imagery captured using NASA FluidCam and Fluid lensing remote sensing technology with low resolution airborne and spaceborne datasets of varying spatial resolutions, spectral spaces, calibrations, and temporal cadence in a supercomputer-based machine learning framework. NeMO-Net augments and improves the benthic habitat classification accuracy of low-resolution datasets across large geographic ad temporal scales using high-resolution training data from FluidCam.NeMO-Net uses fully convolutional networks based upon ResNet and ReSneNet to perform semantic segmentation of remote sensing imagery of shallow marine systems captured by drones, aircraft, and satellites, including WorldView and Sentinel. Deep Laplacian Pyramid Super-Resolution Networks (LapSRN) alongside Domain Adversarial Neural Networks (DANNs) are used to reconstruct high resolution information from low resolution imagery, and to recognize domain-invariant features across datasets from multiple platforms to achieve high classification accuracies, overcoming inter-sensor spatial, spectral and temporal variations.Finally, we share our online active learning and citizen science platform, which allows users to provide interactive training data for NeMO-Net in 2D and 3D, integrated within a deep learning framework. We present results from the PaciSc Islands including Fiji, Guam and Peros Banhos 1 1 2 1 3 1 where 24-class classification accuracy exceeds 91%.

Chirayath, Ved↗

Biochemical and spectroscopic characterizations of the oligomeric antenna of the coral symbiotic Symbiodiniaceae Fugacium kawagutii

Light-harvesting antennas in photosynthesis capture light energy and transfer it to the reaction centers (RCs) where photochemistry takes place. The sustainable growth of the reef-building corals relies on a constant supply of the photosynthates produced by the endosymbiotic dinoflagellate, belonging to the family of Symbiodiniaceae. The antenna system in this group consists of the water-soluble peridinin-chlorophyll $\textit{a}$-protein (PCP) and the intrinsic membrane chlorophyll $\textit{a}$-chlorophyll $c_2$-peridinin protein complex (acpPC). In this report, a nonameric acpPC is reported in a dinoflagellate, Fugasium kawagutii (formerly Symbiodinium kawagutii sp. CS-156). We found that extensive biochemical purification altered the oligomerization states of the initially isolated nonameric acpPC. The excitation energy transfer pathways in the acpPC nonamer and its variants were studied using time-resolved fluorescence and time-resolved absorption spectroscopic techniques at 77 K. Compared to the well-characterized trimeric acpPC, the nonameric acpPC contains an 11 nm red-shifted terminal energy emitter and substantially altered excited state lifetimes of Chl $\textit{a}$. The observed energetic overlap of the fluorescence terminal energy emitters with the absorption of RCs is hypothesized to enable efficient downhill excitation energy transfer. Additionally, the shortened Chl $\textit{a}$ fluorescence decay lifetime in the oligomeric acpPC indicate a protective self-relaxation strategy. We propose that the highly-oligomerized acpPC nonamer represents an intact functional unit in the Symbiodiniaceae thylakoid membrane. They perform efficient excitation energy transfer (to RCs), and are under manageable regulations in favor of photoprotection.

59 BASIC BIOLOGICAL SCIENCES↗

Myriad Mapping of nanoscale minerals reveals calcium carbonate hemihydrate in forming nacre and coral biominerals

Abstract Calcium carbonate (CaCO 3 ) is abundant on Earth, is a major component of marine biominerals and thus of sedimentary and metamorphic rocks and it plays a major role in the global carbon cycle by storing atmospheric CO 2 into solid biominerals. Six crystalline polymorphs of CaCO 3 are known—3 anhydrous: calcite, aragonite, vaterite, and 3 hydrated: ikaite (CaCO 3 ·6H 2 O), monohydrocalcite (CaCO 3 ·1H 2 O, MHC), and calcium carbonate hemihydrate (CaCO 3 ·½H 2 O, CCHH). CCHH was recently discovered and characterized, but exclusively as a synthetic material, not as a naturally occurring mineral. Here, analyzing 200 million spectra with Myriad Mapping (MM) of nanoscale mineral phases, we find CCHH and MHC, along with amorphous precursors, on freshly deposited coral skeleton and nacre surfaces, but not on sea urchin spines. Thus, biomineralization pathways are more complex and diverse than previously understood, opening new questions on isotopes and climate. Crystalline precursors are more accessible than amorphous ones to other spectroscopies and diffraction, in natural and bio-inspired materials.

58 GEOSCIENCES↗

CORAL-2 EAS-3 Deployment (Level-2 Milestone 7907)

This report documents the delivery and installation of rzVernal, a CORAL-2 El Capitan early delivery system deployed on the LLNL Restricted Zone network. Early ASC program users have run codes on the machine in support of application porting for the final El Capitan system which will be deployed at LLNL in CY2023. In addition to the RZ resource, rzVernal, two similar machines, Tioga and Tenaya, have been deployed on the LLNL SRD and Collaboration Zone networks in support of application readiness for the El Capitan platform.

97 MATHEMATICS AND COMPUTING↗

Isolation, Structural Analysis and Biological Activity Assays of Biselisabethoxanes A and B: Two Dissymmetric Bis-Diterpenes from the Southwestern Caribbean Sea Gorgonian Coral Pseudopterogorgia elisabethae

Two novel dissymmetric diterpenoids, biselisabethoxanes A and B (1 and 2), were isolated from the hexane extracts of the gorgonian coral Pseudopterogorgia elisabethae. Biselisabethoxane A (1) represents the first example of a marine-derived C40 dimer made of two distinct diterpene fragments, whereas biselisabethoxane B (2) is a fused heterodimer stemming from coupling of two amphilectane-based fragments. The structures of 1 and 2 were elucidated based on 1D and 2D NMR spectral data analysis. The molecular structure of 1 was subsequently confirmed by X-ray crystallographic analysis. When evaluated for their inhibitory effects in a series of well-established biological activity assays the isolated compounds were shown to moderately inhibit the growth of Mycobacterium tuberculosis.

59 BASIC BIOLOGICAL SCIENCES↗

Subaerially exposed Holocene coral reef, Enriquillo Valley, Dominican Republic

An extremely well-preserved Holocene fringing coral reef occurs at an average elevation of 5 m below sea level around the margins of the central Enriquillo Valley, Dominican Republic. The reef records the latest marine incursion from the east into an 85-km-long, 12-km-wide tectonic depression and appears to represent a unique preservation. Excellent cross sections of the reef exposed in erosional gullies reveal a composition and zonation typical of modern Caribbean reefs that are found in offshore low-energy environments. Radiocarbon age determinations (2) indicate that reef growth coincided with sea-level rise following the last ice age (5,930 + or - 100 to 4,760 + or - 90 yr B.P.). Deltaic deposition and possible vertical movements on active fault scarps dammed the eastern mouth of the valley and created Lago Enriquillo, the level of which was then rapidly lowered by evaporation in an arid climate to produce a saline lake approximately 40 m below sea level. Stratigraphic studies of rocks along the valley edge and data from drill holes in the basin center indicate that there were earlier post-Miocene marine incursions similar to that described here.

Mann, P.↗

Dating earthquakes with high-precision thorium-230 ages of very young corals

Three corals from Vanuatu Islands, whose ages were known from counting annual growth bands, were analyzed by Th-230 age analysis to asses the accuracy of the Th-230 method. The comparison of Th-230 ages with the growth-band ages showed that the Th-230 ages were accurate within an error of + or - 3-5 y. Th-230 dates were then determined for two adjacent emerged heads from Santo Island; the dates were the same, indicating that the heads died at the same time, and consistent with the theory that they were killed by coseismic emergence around 1865 AD. The difference between this data and the data of the only major historically documented earthquake that caused an uplift (1973) suggests a seismic recurrence interval of 108 + or - 4 y for Santo. It is suggested that this approach may be extended back in time and to other localities.

Edwards, R. Lawrence↗

Calibration of the C-14 timescale over the past 30,000 years using mass spectrometric U-Th ages from Barbados corals

Uranium-thorium ages obtained by mass spectrometry from corals raised off the island of Barbados confirm the high precision of this technique over at least the past 30,000 years. Comparison of the U-Th ages with C-14 ages obtained on the Holocene samples shows that the U-Th ages are accurate, because they accord with the dendrochronological calibration. Before 9,000 yr BP, the C-14 ages are systematically younger than the U-Th ages, with a maximum difference of about 3500 yr at about 20,000 yr BP. The U-Th technique thus provides a way of calibrating the radiocarbon timescale beyond the range of dendrochronological calibration.

Bard, Edouard↗

Coral Reef Early Warning System (CREWS) RPC Experiment

This viewgraph document reviews the background, objectives, methodology, validation, and present status of the Coral Reef Early Warning System (CREWS) Rapid Prototyping Capability (RPC) experiment. The potential NASA contribution to CREWS Decision Support Tool (DST) centers on remotely sensed imagery products.

Estep, Leland↗

Simulated NASA Satellite Data Products for the NOAA Integrated Coral Reef Observation Network/Coral Reef Early Warning System

This RPC (Rapid Prototyping Capability) experiment will demonstrate the use of VIIRS (Visible/Infrared Imager/Radiometer Suite) and LDCM (Landsat Data Continuity Mission) sensor data as significant input to the NOAA (National Oceanic and Atmospheric Administration) ICON/ CREWS (Integrated Coral Reef Observation System/Coral Reef Early Warning System). The project affects the Coastal Management Program Element of the Applied Sciences Program.

Estep, Leland↗

Photography of Coral Reefs from ISS

This viewgraph presentation reviews the uses of photography from the International Space Station (ISS) in studying Earth's coral reefs. The photographs include reefs in various oceans . The photographs have uses for science in assisting NASA mapping initiatives, distribution worldwide through ReefBase, and by biologist in the field.

Robinson, Julie A.↗