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DOE OSTI2024

Comparative analysis of KRAS4a and KRAS4b splice variants reveals distinctive structural and functional properties

KRAS, the most frequently mutated oncogene in human cancer, produces two isoforms, KRAS4a and KRAS4b, through alternative splicing. These isoforms differ in exon 4, which encodes the final 15 residues of the G-domain and hypervariable regions (HVRs), vital for trafficking and membrane localization. While KRAS4b has been extensively studied, KRAS4a has been largely overlooked. Our multidisciplinary study compared the structural and functional characteristics of KRAS4a and KRAS4b, revealing distinct structural properties and thermal stability. Position 151 influences KRAS4a’s thermal stability, while position 153 affects binding to RAF1 CRD protein. Nuclear magnetic resonance analysis identified localized structural differences near sequence variations and provided a solution-state conformational ensemble. Notably,KRAS4aexhibits substantial transcript abundance in bile ducts, liver, and stomach, with transcript levels approachingKRAS4bin the colon and rectum. Functional disparities were observed in full-length KRAS variants, highlighting the impact of HVR variations on interaction with trafficking proteins and downstream effectors like RAF and PI3K within cells.

Science & Technology - Other Topics↗

NASA NTRS1975

Broadband noise generated by turbulent inflow to rotor or stator blades in an annular duct

The Green's function relating the radiated pressure field to the fluctuating forces on rotor or stator blades is developed in the presence of dissipation due to turbulent velocity fluctuations and sound speed fluctuations. The resonances in the output power spectrum which would occur at the cut-off frequencies in the absence of dissipation should be removed and smeared out by the incorporation of dissipation. Wave number dependence is developed for an effective eddy viscosity due to the aforementioned fluctuations in the background medium. The space-time correlation function for blade-normal velocity fluctuations on a single or on two different blades is developed in terms of the velocity correlation tensor for the inflow under the assumptions of isotropy and (Taylor) frozen behavior. The correlation function is then simplified under certain approximations and the behavior of the blade-force correlation function is inferred.

Lnae, F.↗

NASA NTRS2005

The Role of Structural Dynamics and Testing in the Shuttle Flowliner Crack Investigation

During a normal inspection of the main propulsion system at Kennedy Space Center, small cracks were noticed near a slotted region of a gimbal joint flowliner located just upstream from one of the Space Shuttle Main Engines (SSME). These small cracks sparked an investigation of the entire Space Shuttle fleet main propulsion feedlines. The investigation was initiated to determine the cause of the small cracks and a repair method that would be needed to return the Shuttle fleet back to operation safely. The cracks were found to be initiated by structural resonance caused by flow fluctuations from the SSME low pressure fuel turbopump interacting with the flowliner. The pump induced backward traveling wakes that excited the liner and duct acoustics which also caused the liner to vibrate in complex mode shapes. The investigation involved an extensive effort by a team of engineers from the NASA civil servant and contractor workforce with the goal to characterize the root cause of the cracking behavior of the fuel side gimbal joint flowliners. In addition to working to identify the root cause, a parallel path was taken to characterize the material properties and fatigue capabilities of the liner material such that the life of the liners could be ascertained. As the characterization of the material and the most probable cause matured, the combination of the two with pump speed restrictions provided a means to return the Shuttle to flight in a safe manner. This paper traces the flowliner investigation results with respect to the structural dynamics analysis, component level testing and hot-fire flow testing on a static testbed. The paper will address the unique aspects of a very complex problem involving backflow from a high performance pump that has never been characterized nor understood to such detail. In addition, the paper will briefly address the flow phenomena that excited the liners, the unique structural dynamic modal characteristics and the variability of SSME operation which has ultimately ensured the safe and reliable operation of the shuttle main engines for each flight.

Frady, Gregory P.↗

NASA NTRS1974

Finite-amplitude waves in cylindrical lined ducts

A second-order uniformly valid expansion is obtained for nonlinear waves propagating in a cylindrical duct lined with a point-reacting acoustic material that consists of a porous sheet followed by honey-comb cavities and backed by the impervious walls of the duct. The effect of the liner is taken into account by coupling the waves in the duct with those in the liner. As in the two-dimensional case, the nonlinearity increases the attenuation rate at all frequencies except in narrow bandwidths around the resonant frequencies, irrespective of the geometrical dimensions of the liner or the acoustic properties of the porous sheet.

Nayfeh, A. H.↗

NASA NTRS2008

Investigation of an Anomaly Observed in Impedance Eduction Techniques

An intensive investigation into the cause of anomalous behavior commonly observed in impedance eduction techniques is performed. The investigation consists of grid refinement studies, detailed evaluation of results at and near anti-resonance frequencies, comparisons of different model results with synthesized and measured data, assessment or optimization techniques, and evaluation or boundary condition effects. Results show that the root cause of the anomalous behavior is the sensitivity of the educed impedance to small errors in the measured termination resistance at frequencies near anti-resonance or cut-on of a higher-order mode. Evidence is presented to show that the common usage of an anechoic, plane wave termination boundary condition in ducts where the "true" termination is reflective may act as a trigger for these anomalies. Replacing the exit impedance boundary condition by an exit pressure condition is shown to reduce the anomalous results.

Watson, W. R.↗

NASA NTRS1979

Acoustic plane waves normally incident on a clamped panel in a rectangular duct

The theory of acoustic plane wave normally incident on a clamped panel in a rectangular duct is developed. The coupling theory between the elastic vibrations of the panel (plate) and the acoustic wave propagation in infinite space and in the rectangular duct is considered. The partial differential equation which governs the vibration of the panel (plate) is modified by adding to its stiffness (spring) forces and damping forces, and the fundamental resonance frequency and the attenuation factor are discussed. The noise reduction expression based on the theory is found to agree well with the corresponding experimental data of a sample aluminum panel in the mass controlled region, the damping controlled region, and the stiffness controlled region. All the frequency positions of the upward and downward resonance spikes in the sample experimental data are identified theoretically as resulting from four cross interacting major resonance phenomena: the cavity resonance, the acoustic resonance, the plate resonance, and the wooden back panel resonance.

Unz, H.↗

NASA NTRS2008

Lessons Learned from Previous Space-Borne Sounders as a Guide to Future Sounder Development

Space-borne radio sounding is considered to be the gold standard for electron-density (N(sub e)) measurements compared to other techniques even under low-density conditions, such as N(sub e) < 1/cu cm, when other techniques are known to experience difficulties. These reliable measurements are not restricted to in-situ N(sub e) determinations since a spaceborne sounder can provide vertical N(sub e) profiles (N(sub e)(h)) from the spacecraft altitude to the altitude of maximum N(sub e). Near-conjunction studies involving the International Satellites for Ionospheric Studies (ISIS) satellites in the topside ionosphere and Dynamics Explorer 2 (DE 2) near the altitude of the F-region peak density have verified that, even at the greatest distance from the sounder, the ISIS-derived N(sub e)(h) profiles agree with the DE-2 Langmuir-probe measurements to within about 30% over a density range of more than two decades. Space-borne sounders can also provide N(sub e) profiles along the magnetic-field B, by inverting echoes that are ducted along field-aligned irregularities (FAI), and can provide information about the terrain beneath the satellite by examining surface reflections in the frequency range above the ionospheric penetration frequency. Many nations have launched rocket and satellite radio sounders in geospace over more than 4 decades and there have been sounders on space-probes and in orbit around other planets. Here we will summarize some of the lessons learned from these accomplishments by analyzing data from radio sounders on the Alouette and ISIS satellites and the OEDIPUS and other rockets in the terrestrial ionosphere, the IMAGE satellite in the terrestrial magnetosphere, the Ulysses space probe in Jupiter's 10 plasma torus and the MARSIS satellite in orbit around Mars. The emphasis will be on information deduced concerning (1) fundamental plasma processes and gradients in N, and B in the vicinity of the sounders from sounder-stimulated plasma resonances and short-range echoes involving ion as well as electron motions, (2) the importance of the antenna orientation relative to B for the detection of different plasma resonances, (3) sounder-stimulated plasma phenomena, including FAI, when special plasma conditions are satisfied, (4) the minimum power required for long-range echoes, as indicated by echoes from frequency components of the transmitted pulse and by multiple ducted echoes, and (5) the terrain beneath the satellite from surface reflections. Knowledge of these results should enable the optimum design of a future sounder to satisfy specific science requirements with minimal spacecraft resources.

Benson, Robert F.↗

NASA NTRS2005

Status of Duct Liner Technology for Application to Aircraft Engine Nacelles

Grazing flows and high acoustic intensities impose unusual design requirements on acoustic liner treatments used in aircraft engine nacelles. Increased sound absorption efficiency (requiring increased accuracy of liner impedance specification) is particularly critical in the face of ever decreasing nacelle wall area available for liner treatments in modern, high-bypass ratio engines. This paper reviews the strategy developed at Langley Research Center for achieving a robust measurement technology that is crucial for validating impedance models for aircraft liners. Specifically, the paper describes the current status of computational and data acquisition technologies for reducing impedance in a flow duct. Comparisons of reduced impedances for a "validation liner" using 1980's and 2000's measurement technology are consistent, but show significant deviations (up to 0.5 c exclusive of liner anti-resonance region) from a first principles impedance prediction model as grazing flow centerline Mach numbers increase up to 0.5. The deviations, in part, are believed related to uncertainty in the choice of grazing flow parameters (e.g. cross-section averaged, core-flow averaged, or centerline Mach number?). Also, there may be an issue with incorporating the impedance discontinuities corresponding to the hard wall to liner interface (i.e. leading and trailing edge of test liner) within the discretized finite element model.

Parrott, Tony L.↗

NASA NTRS1978

Duct wall impedance control as an advanced concept for acoustic suppression enhancement

A systems concept procedure is described for the optimization of acoustic duct liner design for both uniform and multisegment types. The concept was implemented by the use of a double reverberant chamber flow duct facility coupled with sophisticated computer control and acoustic analysis systems. The optimization procedure for liner insertion loss was based on the concept of variable liner impedance produced by bias air flow through a multilayer, resonant cavity liner. A multiple microphone technique for in situ wall impedance measurements was used and successfully adapted to produce automated measurements for all liner configurations tested. The complete validation of the systems concept was prevented by the inability to optimize the insertion loss using bias flow induced wall impedance changes. This inability appeared to be a direct function of the presence of a higher order energy carrying modes which were not influenced significantly by the wall impedance changes.

Dean, P. D.↗

NASA NTRS1980

Plenum response to simulated disturbances of the model and fan inlet guide vanes in a transonic tunnel

In order to aid in the design of the National Transonic Facility (NTF) control system, test section/plenum response studies were carried out in a 0.186 scale model of the NTF high speed duct. Two types of disturbances, those induced by the model and those induced by the compressor inlet guide vanes were simulated. Some observations with regard to the test section/plenum response tests are summarized as follows. A resonance frequency for the test section/plenum area of the tunnel of approximately 50 Hz was observed for Mach numbers from 0.40 to 0.90. However, since the plenum is 3.1 times (based on volume) too large for the scaled size of the test section, care must be taken in extrapolating these data to NTF conditions. The plenum pressure data indicate the existence of pressure gradients in the plenum. The test results indicate that the difference between test section static pressure and plenum pressure is dependent on test section flow conditions. Plenum response to inlet guide vane type disturbances appears to be slower than plenum response to test section disturbances.

Gloss, B. B.↗

NASA NTRS1985

Application of High Order Acoustic Finite Elements to Transmission Losses and Enclosure Problems

A family of acoustic finite elements was developed based on C continuity (acoustic pressure being the nodal variable) and the no-flow condition. The family include triangular, quadrilateral and hexahedral isoparametric elements with linear quadratic and cubic variation in modelling and distortion. Of greatest use in problems with irregular boundaries are the cubic isoparametric elements: the 32 node hexahedral element for three-dimensional systems; and the twelve node quadrilateral and ten node triangular elements for two-dimensional/axisymmetric applications. These elements were applied to problems involving cavity resonances, transmission loss in silencers and the study of end effects, using a Floating Point Systems 164 attached array processor accessed through an Amdahl 5860 mainframe. The elements are presently being used to study the end effects associated with duct terminations within finite enclosures. The transmission losses with various silencers and sidebranches in ducts is also being studied using the same elements.

Craggs, A.↗

NASA NTRS1972

Satellite observations of whistler-mode signals in the conjugate region of a 200-kilohertz station.

Study of the signals recorded by a narrow-band (about 200 Hz) receiver at a broadcast station operating at 200 kHz and in the conjugate region of Ashkhabad. The latitude of the station is nearly low enough for propagation of a 200-kHz signal in the ducted whistler mode to the conjugate hemisphere along field lines terminating at the station. In the dawn-dusk orbital plane signals are indeed relatively often observed in the conjugate region, but the source of the signals and their path of propagation is not completely clear. The pattern of observations is consistent with propagation over the long magnetospheric path in field-aligned ducts spread in longitude near 22 deg invariant latitude, but an interpretation involving nonducted propagation is preferred, in which the occasionally high electric-field intensities encountered (greater than 10 microvolts/m) result from focusing effects or from propagation near the resonance angle.

Laaspere, T.↗

NASA NTRS1995

Parallel-Plate Acoustic Absorbers For Hot Environments

Stacking patterns and materials chosen to suppress noise. Acoustic liners incorporating parallel-plate absorbing elements proposed for use in suppressing broadband aerodynamic noise originating in flows of hot gases in ducts. One potential application lies in suppressing noise generated in exhaust-jet mixer/ejectors in propulsion system of proposed High-Speed Civil Transport. In addition, such absorbers useful in any situation in which high temperature limits use of such conventional resonant acoustic-liner materials as perforated face sheets bonded to honey-comb-core panels.

Doychak, Joseph↗

NASA NTRS2018

Resonance and Tones in Dual-Stream Nozzle Flows

A dual-stream nozzle configuration was studied numerically with the objective of predicting the appearance of tones and study their sources. It was found that some of the tones traced to a coupling between Strouhal shedding from the struts, which held different pieces of the nozzle together, and various duct acoustic modes. A focus of the work was on exploring the nature of the duct modes. First, elements of the numerical procedure were studied for a 4-strut nozzle, validating the results with existing experimental data. The approach was then applied to a 3-strut geometry and four different excitation methods. The predicted tones and associated duct modes are analyzed in detail.

Milanovic, Ivana↗

NASA NTRS1985

Measured acoustic properties of variable and low density bulk absorbers

Experimental data were taken to determine the acoustic absorbing properties of uniform low density and layered variable density samples using a bulk absober with a perforated plate facing to hold the material in place. In the layered variable density case, the bulk absorber was packed such that the lowest density layer began at the surface of the sample and progressed to higher density layers deeper inside. The samples were placed in a rectangular duct and measurements were taken using the two microphone method. The data were used to calculate specific acoustic impedances and normal incidence absorption coefficients. Results showed that for uniform density samples the absorption coefficient at low frequencies decreased with increasing density and resonances occurred in the absorption coefficient curve at lower densities. These results were confirmed by a model for uniform density bulk absorbers. Results from layered variable density samples showed that low frequency absorption was the highest when the lowest density possible was packed in the first layer near the exposed surface. The layers of increasing density within the sample had the effect of damping the resonances.

Dahl, M. D.↗

NASA NTRS1991

Low-dispersion finite difference methods for acoustic waves in a pipe

A new algorithm for computing one-dimensional acoustic waves in a pipe is demonstrated by solving the acoustic equations as an initial-boundary-value problem. Conventional dissipation-free second-order finite difference methods suffer severe phase distortion for grids with less that about ten mesh points per wavelength. Using the signal generation by a piston in a duct as an example, transient acoustic computations are presented using a new compact three-point algorithm which allows about 60 percent fewer mesh points per wavelength. Both pulse and harmonic excitation are considered. Coupling of the acoustic signal with the pipe resonant modes is shown to generate a complex transient wave with rich harmonic content.

Davis, Sanford↗

NASA NTRS1993

Screech tones from free and ducted supersonic jets

The dependence of the instability wave spectrum on azimuthal mode number, the jet to ambient gas temperature ratio, and the jet Mach number is studied. It is shown that the switch of the dominant screech mode (axisymmetric to helical/flapping) as Mach number increases is due to the switch in dominance of the corresponding mode of instability waves. Super-resonance can occur when the feedback loop is powered by the most amplified instability wave. It is suggested that the large amplitude pressure fluctuations and tone in the test cells are generated by super-resonance.

Tam, C. K. W.↗

NASA NTRS2011

Analyses of Injection-Coupled Combustion Instability from J-2X Gas Generator Development

During development of the gas generator for the liquid oxygen/liquid hydrogen propellant J-2X rocket engine, combustion instabilities were observed near the frequency of the first longitudinal acoustic mode of the hot gas combustion chamber duct. These instabilities were similar to intermediate-frequency or buzz-type instabilities as described in historical programs, except for several aspects: 1) the frequencies were low, in the realm of chug; 2) at times the instability oscillation amplitudes were quite large, with peak-to-peak amplitudes exceeding 50% of the mean chamber pressure along with the appearance of harmonics; 3) the chamber excitation was related to but not exactly at the first longitudinal combustion chamber acoustic mode; and 4) the injector provided mass flow rate oscillations induced by capacitance and inertance effects in the injector rather than by organ pipe resonances of the coaxial oxidizer posts. This type of combustion instability is referred to as "injection coupling" because one critical driving source of the instability is mass flow rate oscillations from the injector. However, the type of injection coupling observed here is different than observed in previous instances of buzz instability with coaxial injectors, because of the lower frequencies and lack of influence from the oxidizer post organ pipe resonances. Test data and preliminary analyses of the initial combustion instabilities were presented in several papers at the 5th Liquid Propulsion Subcommittee meeting. Since that time, additional hot-fire tests with several new hardware configurations have been conducted, and additional analyses have been completed. The analytical models described in previous papers have been updated to include the influences of new geometrical configurations, including a different oxidizer injector manifold configuration and a branch pipe in the hot gas duct that supplies gaseous helium during the start transient to pre-spin the turbine. In addition, the analysis methodology has been revisited to evaluate the potential influence of a combustion response as well as an injection response.

Hulka, James R.↗