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At least 73 records · Page 4

Wetlands Delineation Report and Classification: PNNL – Sequim (formerly MSL) Estuary Wetland Delineation

The Pacific Northwest National Laboratory (PNNL) – Sequim, historically known as the Marine Sciences Laboratory (MSL) in Sequim, Washington, is managed and operated by Battelle on behalf of the U.S. Department of Energy (DOE) Pacific Northwest Site Office (PNSO). The site provides capabilities for future energy research, climate change effects analyses, wetland and coastal ecosystem restoration, other environmental research involving marine resources and hosts the only marine research facilities in the Department of Energy National Laboratory Complex. In order to support campus development, maintenance, and potential research activities, a wetland delineation was conducted on the northern portion of campus in accordance with state and federal wetland regulations. This technical report details out the delineation.

54 ENVIRONMENTAL SCIENCES↗

Sampling Microbial Dynamics in the Salish Sea Estuary: Evaluating Methods to Capture Cyanobacteria and Cyanophage

Introduction: Picocyanobacteria from the genera Prochlorococcus and Synechococcus thrive across the globe in aquatic environments, have relatively small genomes, and have growth dynamics regulated by both viral interactions and abiotic conditions, making them excellent model organisms for exploring host-pathogencoevolution. Methods: We developed and refined methods to sample and sequence cyanobacteria, cyanophages, and measured features of their abiotic environment. Results: The protocol described herein can successfully discriminate large-cell eukaryotic organisms, but size fractionation of picocyanobacteria appears to be affected by the presence of free DNA, multicellular structures, and abundant tycheposons. Our preferred final protocol from this exploratory effort included a combination of in-line and single vacuum flask filtrations, which reduced filtration processing time by over threefold in some cases compared to other tested methods, such as a fully in-line sequence or in-site filtrations. We successfully extracted an average of approximately 400–1200 ng for all filter fractions, with some variations between kits. Discussion: The protocol described herein can successfully discriminate large-cell eukaryotic organisms, but size fractionation of picocyanobacteria appears to be affected by the presence of free DNA, multicellular structures, and abundant tycheposons.

Salish Sea↗

Estuary and barrier island study

The author has identified the following significant results. Scan line distortion is apparent in ERTS-1 imagery, imparting a serrated-edge appearance to shorelines. This feature however does not hinder observation and interpretation of broad features such as shoaling areas and sediment plumes. Shoaling in the backshore areas and inlets is easily discernible in spectral bands 4 and 5. Contrast between land and water is especially striking in spectral band 7, allowing easy identification of tidal flat areas.

Berg, D. W.↗

Collection and analysis of remotely sensed data from the Rhode River Estuary Watershed

The remote sensing study to survey the Rhode River watershed for spray irrigation with secondarily treated sewage is reported. The standardization of Autumn coloration changes with Munsell color chips is described along with the mapping of old field vegetation for the spray irrigation project. The interpretation and verification of salt marsh vegetation by remote sensing of the water shed is discussed.

Jenkins, D. W.↗

Sediment concentration mapping in tidal estuaries

An analytical procedure has been developed that considers the ERTS-1 multispectral scanner as a reflectance spectrophotometer. ADP techniques requiring only very limited computer capability are utilized to search the data defining the spectral reflectance characteristics of a scene on a pixel-by-pixel basis, identify each pixel whose spectral reflectance matches a reference spectrum, and generate maps that identify pixel locations where spectrum matches occur and identify the spectrum that was matched. If the reference spectra are known to represent a specific condition on the ground, a map of the distribution of that condition can be output as a dimensionally accurate overlay to maps of any selected scale. Two applications are described: (1) mapping the distribution of water masses exhibiting specific suspended sediment concentrations; and (2) determining the location and delineation of surface water bodies in the southeastern U. S. The techniques described are being successfully used to map the land area inundated by the 1973 spring flood in the Lower Mississippi River Valley, map sediment distributions in Lake Pontchartrain (in Louisiana) as a result of opening the Bonnet Carre Floodway during the spring flood, and inventory lakes and reservoirs.

Williamson, A. N.↗

Vegetation and other parameters in the Brevard County bar-built estuaries

It is shown that low-altitude aerial photography, using specific interpretive techniques, can effectively delineate sea-grass beds, oyster beds, and other underwater features. Various techniques were used on several sets of aerial imagery. Imagery was tested using several data analysis methods, ground truth, and biological testing. Approximately 45,000 acres of grass beds, 2,500 acres of oyster beds, and 4,200 acres of dredged canals were mapped. This data represents selected sites only. Areas chosen have the highest quality water in Brevard County and are among the most highly recognized biologically productive waters in Florida.

Down, C.↗

Thematic mapper research in the earth sciences: Small scale patches of suspended matter and phytoplankton in the Elbe River Estuary, German Bight and Tidal Flats

A Thematic Mapper (TM) field experiment was followed by a data analysis to determine TM capabilities for analysis of suspended matter and phytoplankton. Factor analysis showed that suspended matter concentration, atmospheric scattering, and sea surface temperature can be retrieved as independent factors which determine the variation in the TM data over water areas. Spectral channels in the near infrared open the possibility of determining the Angstrom exponent better than for the coastal zone color scanner. The suspended matter distribution may then be calculated by the absolute radiance of channel 2 or 3 or the ratio of both. There is no indication of whether separation of chlorophyll is possible. The distribution of suspended matter and sea surface temperature can be observed with the expected fine structure. A good correlation between water depth and suspended matter distribution as found from ship data can now be analyzed for an entire area by the synoptic view of the TM scenes.

Grassl, H.↗

Small scale patches of suspended matter and phytoplankton in the Elbe River estuary, German Bight and tidal flats

Landsat 5 TM measurements are found suitable for study of small scale features in coastal waters; three independent factors, namely suspended matter concentration, atmospheric scattering, and sea-surface temperature, were extracted from all seven TM channels on the basis of factor analysis. The distribution of suspended matter in near-surface water layer and sea surface temperature is observable with a spatial resolution of at least 120 x 120 sq m. The high correlation between water depth and suspended matter distribution established by ship-gathered data supports the presently hypothesized control by bottom topography and wind-modified tidal currents of eddy and front formation.

Doerffer, R.↗

Salt Marsh Formation in the Lower Hudson River Estuary

Salt marshes are constant depositional environments and as a result contain accurate indicators of past relative sea level rise and salinity. The Hudson River marshes are at least twice as deep when compared to coastal marshes on either side of the mouth of the Hudson. The reason for this difference in sedimentation is unclear. This study uses macrofossil data as well as sediment stratigraphy in order to understand the formation and evolution of these marshes. The composition of seeds, roots, shoots and foraminifera, are used to indicate past sea levels. The four sites involved in this study are, from south to north, the Arthur Kill Marsh in Staten Island (40 36 N, 74 77W), Piermont marsh (N 4100; 73 55W) Croton Point (41 14 N; 73 50W) and Iona Island (41 18N, 73 58W). These are all tidally influenced but with increasing distances from the New York Bight, which gives a good spectrum of tidal influence. AMS-C14 dates on basal macrofossils will document the time of each marsh formation. Basal material from Arthur Kill (8 m) includes freshwater seeds such as Viola, Potomageton and Alnus along with Salix buds. Basal material from Croton Point (10 m) includes fibrous woody material, foraminifera and Zanichellia seeds and other brackish vegetational components. The basal material from Piermont (13.77 m) is lacking any identifiable macrofossils between 150 and 500 microns. The basal material from Iona Island (10 m) has vegetation such as Scirpus and Cyperus seeds, probably implying a brackish environment. The freshwater origin of the Arthur Kill marsh in Staten Island is significant because it predates either sea level rise or the western channel incision. Additional implications for this study include evidence for changes in river channel geomorphology. Reasons for the relatively deeper river marshes include possible basal clay compaction, high production due to river and marine nutrients as well as tectonic activity. This study provides the groundwork for more high-resolution studies of these marshes to understand the fluctuations in salinity caused by relative sea level rise, tectonic faulting and/or changes in precipitation/evaporation.

Merley, Michael↗

Wind Induced Sediment Resuspension in a Microtidal Estuary

Bottom sediment resuspension frequency, duration and extent (% of bottom sediments affected) were characterized for the fifteen month period from September 1995 to January 1997 for the Barataria Basin, LA. An empirical model of sediment resuspension as a function of wind speed, direction, fetch and water depth was derived from wave theory. Water column turbidity was examined by processing remotely sensed radiance information from visible and near-IR AVHRR imagery. Based on model predictions, wind induced resuspension occurred during all seasons of this study. Seasonal characteristics for resuspension reveal that late fall, winter and early spring are the periods of most frequent and intense resuspension. Model predictions of the critical wind speed required to induce resuspension indicate that winds of 4 m/s (averaged over all wind directions resuspend approximately 50% of bottom sediments in the water bodies examined. Winds of this magnitude (4 m/s) occurred for 80% of the time during the late fall, winter and early spring and for approximately 30% of the time during the summer. More than 50% of the bottom sedimets are resuspended throughout the year, indicating the importance of resuspension as a process affecting sediment and biogeochemical fluxes in the Barataria Basin.

Booth, J. G.↗

The Transport and Fate of Particulate Material in a Shallow, Turbid Estuary: Seasonal and Decadal Characteristics from 7-Be and 210-Pb Techniques

Seasonal and long-term sediment transport characteristics were examined using surficial sediment 7-Be inventories and the down core distribution of excess 210-Pb. Data were collected in the Barataria Basin, LA over the fifteen month period from September 1995 to January 1997. Seasonal sediment transport rates based on 7-Be inventories ranged from -1.6E3 to 1.42E4 g/m2/yr, whereas decadal sediment burial rates based on excess 210-Pb ranged from 3.83E2 to 2.00E3 g/m2/yr, respectively. Seasonal transport characteristics vary with location in the basin and appear to be largely controlled by seasonal weather patterns and the associated winds. It appears that, at less sheltered locations, long term rates of sediment burial are controlled by frontal passages and the associated strong northerly and southerly component winds; whereas at fetch limited locations burial rates are likely controlled by stronger weather events such as tropical storms and hurricanes.

Booth, J. G.↗

Contrasting Inherent Optical Properties and Carbon Metabolism Between Five Northeastern (USA) Estuary-plume Systems

We have recently developed the ability to rapidly assess Surface inherent optical properties (IOP), oxygen concentration and pCO2 in estuarine-plume systems using flow-through instrumentation. During the summer of 2004, several estuarine-plume systems were surveyed which include the Pleasant (ME), Penobscot (ME), Kennebec-Androscoggin (ME), Merrimack (NH-MA) and Hudson (NY). Continuous measurements of surface chlorophyll and colored dissolved organic carbon (CDOM) fluorescence, beam attenuation, temperature, salinity, oxygen and pC02 were taken at each system along a salinity gradient from fresh water to near oceanic endmembers. CTD and IOP profiles were also taken at predetermined surface salinity intervals. These were accompanied by discrete determinations of chlorophyll (HPLC and fluorometric), total suspended solids (TSS), dissolved organic carbon (DOC) and alkalinity. IOP data were calibrated using chlorophyll, DOC and TSS data to enable the retrieval of these constituents from IOP data. Considerable differences in the data sets were observed between systems. These ranged from the DOC-enriched, strongly heterotrophic Pleasant River System to the high-chlorophyll autotrophic Merrimack River System. Using pCO2 and oxygen saturation measurements as proxies for water column metabolism, distinct relationships were found between trophic status and inherent optical properties. The nature of these relationships varies between systems and is likely a function of watershed and estuarine attributes including carbon and nutrient loading, in-situ production and related autochthonous inputs of DOC and alkalinity. Our results suggest that IOP data may contain significant information about the trophic status of estuarine and plume systems.

Vandemark, Doug↗

Solutions Network Formulation Report. The Potential Contributions of the Global Precipitation Measurement Mission to Estuary Management in Acadia National Park

This candidate solution suggests the use of GPM precipitation observations to enhance the Acadia National Park NLERDSS. Simulated GPM data should provide measurements that would enable analysis of how precipitation affects runoff and nutrient load in the park?s wetlands. This solution benefits society by aiding park and resource managers in making predictions based on hypothetical changes and in identifying effective mitigation scenarios. This solution supports the Coastal Management, Water Management, and Ecological Forecasting National Applications.

Anderson, Daniel↗

Estimating Major Ion and Nutrient Concentrations in Mangrove Estuaries in Everglades National Park Using Leaf and Satellite Reflectance

Coastal mangrove ecosystems are under duress worldwide because of urban development, sea-level rise, and climate change, processes that are capable of changing the salinity and nutrient concentration of the water utilized by the mangroves. This study correlates long-term water chemistry in mangrove environments, located in Everglades National Park,with mangrove spectral reflectance measurements made at both the leaf and canopy scales. Spectral reflectance measurements were collected using a handheld spectrometer for leaf-level measurements and Landsat 5TMdata for regional coverage. Leaf-level reflectance data were collected from three mangrove species (i.e., red, black and white mangroves) across two regions; a tall mangrove (approximately 18m) and dwarf mangrove (1- 2 m) region. The reflectance data were then used to calculate a wide variety of biophysical reflectance indices (e.g., NDVI, EVI, SAVI) to determine signs of stress. Discrete, quarterly water samples from the surface water, groundwater, and pore water (20 and 85 cm depths) and daily autonomous surface water samples were collected at each site and analyzed for major anions (Cl(−) and SO(2(-)/4)), cations (Na(+), K(+), Mg(sup 2(+)), and Ca(sup 2(+)), total nitrogen (TN) and total phosphorus (TP).Mangrove sites that exhibited the highest salinity and ionic concentrations in the surface and subsurface water also had the lowest near-infrared reflectance at both the leaf and satellite levels. Seasonal reflectance responses were measured in the near-infrared (NIR) wavelengths at both the leaf and canopy scales and were strongly correlated with nutrient and ionic concentrations in the surface and subsurface water, even though there was no significant separability between the three mangrove species. Study sites that experienced the greatest variability in surface and subsurface water ionic concentrations also exhibited the greatest fluctuations in NIR spectral reflectance. Landsat 5TM images were able to detect tall and dwarf mangroves by the differences in spectral indices (e.g., NDVI, NDWI, and EVI) because of the variability in the background conditions amongst the environments. In addition, Landsat 5TM images spanning 16 years (1993- 2009) were successfully used to estimate the seasonal variability in ionic concentrations in the surface water across the Florida Coastal mangrove ecotone. This study has shown that water chemistry can be estimated indirectly by measuring the change in spectral response at the leaf- or satellite-scale. Furthermore, the results of this research may be extrapolated to similar coastal mangrove systems throughout the Caribbean and world-wide wherever red, black, and white mangroves occur.

Mangroves↗