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At least 73 records · Page 4

Properties of the Graph Modularity Matrix and its Applications

We study the popular modularity matrix and respective functional used in connection with graph clustering and derive some properties useful when performing vertex aggregation of the associated graph. These properties are employed in the derivation of a multilevel parallel pairwise aggregation algorithm. Some illustrative examples which include algebraic multigrid (AMG) coarsening that follows strong direction of anisotropy in finite element problems as well as comparative performance results of the studied algorithm are presented.

97 MATHEMATICS AND COMPUTING↗

Performance tuning of CEED software and 1st and 2nd wave apps

The goal of this milestone was the performance tuning of the CEED software, as well as the use and tuning of CEED to accelerate the first and second wave of targeted ECP applications. In this milestone, the CEED team developed optimization techniques and tuned for performance the CEED software to accelerate the first and second wave target ECP applications. Specifically, the focus was on the following: (1) Efficient use of the memory sub-system for managing data motion and interactions among different physics packages and libraries; this included integration of the new developments in a libCEED 0.5 software release; (2) Enhancing the CEED libraries with GPU and AMD GPU support in close interaction with vendors; (3) Optimal data locality and motion, and enhanced scalability and parallelism; this included vendors interactions for improvements in data motion and making strong scaling easier and more efficient; and (4) Continue boosting performance for the first-wave and second-wave of ECP target applications, including ExaSMR, ExaWind, Urban, MARBL, E3SM, and ExaAM. A main part of this milestone was the performance tuning of the CEED first-wave and second-wave ECP applications. This included the ExaSMR application – Coupled Monte Carlo Neutronics and Fluid Flow Simulation of Small Modular Reactors (ORNL), the MARBL application – Next-Gen Multi-physics Simulation Code (LLNL), and the ExaAM ExaConstit – a miniapp for the Transforming Additive Manufacturing through Exascale Simulation applications project (ExaAM), as well as ExaWind, Urban, and E3SM. The artifacts delivered include performance improvements in CEED’s 1st and 2nd wave of applications, and tuned CEED software for various architectures through a number of backends, freely available in the CEED’s repository on GitHub. See the CEED website, http://ceed.exascaleproject.org and the CEED GitHub organization, http://github.com/ceed for more details. In addition to details and results from the above R&D efforts, in this document we are also reporting on other project-wide activities performed in Q4 of FY19 including: CEED’s third annual meeting, MFEM GPU kernels scaling improvements, libCEED 0.5 and NekRS releases, an overview paper covering latest results on a set of bake-off high-order finite element problems (BPs), and other outreach efforts.

97 MATHEMATICS AND COMPUTING↗

Potential of minicomputer/array-processor system for nonlinear finite-element analysis

The potential of using a minicomputer/array-processor system for the efficient solution of large-scale, nonlinear, finite-element problems is studied. A Prime 750 is used as the host computer, and a software simulator residing on the Prime is employed to assess the performance of the Floating Point Systems AP-120B array processor. Major hardware characteristics of the system such as virtual memory and parallel and pipeline processing are reviewed, and the interplay between various hardware components is examined. Effective use of the minicomputer/array-processor system for nonlinear analysis requires the following: (1) proper selection of the computational procedure and the capability to vectorize the numerical algorithms; (2) reduction of input-output operations; and (3) overlapping host and array-processor operations. A detailed discussion is given of techniques to accomplish each of these tasks. Two benchmark problems with 1715 and 3230 degrees of freedom, respectively, are selected to measure the anticipated gain in speed obtained by using the proposed algorithms on the array processor.

Strohkorb, G. A.↗

Finite element computation on nearest neighbor connected machines

Research aimed at faster, more cost effective parallel machines and algorithms for improving designer productivity with finite element computations is discussed. A set of 8 boards, containing 4 nearest neighbor connected arrays of commercially available floating point chips and substantial memory, are inserted into a commercially available machine. One-tenth Mflop (64 bit operation) processors provide an 89% efficiency when solving the equations arising in a finite element problem for a single variable regular grid of size 40 by 40 by 40. This is approximately 15 to 20 times faster than a much more expensive machine such as a VAX 11/780 used in double precision. The efficiency falls off as faster or more processors are envisaged because communication times become dominant. A novel successive overrelaxation algorithm which uses cyclic reduction in order to permit data transfer and computation to overlap in time is proposed.

Mcaulay, A. D.↗

Finite elements and the method of conjugate gradients on a concurrent processor

An algorithm for the iterative solution of finite element problems on a concurrent processor is presented. The method of conjugate gradients is used to solve the system of matrix equations, which is distributed among the processors of a MIMD computer according to an element-based spatial decomposition. This algorithm is implemented in a two-dimensional elastostatics program on the Caltech Hypercube concurrent processor. The results of tests on up to 32 processors show nearly linear concurrent speedup, with efficiencies over 90% for sufficiently large problems.

Lyzenga, G. A.↗

Error-source effects in a high-accuracy optical finite-element processor

High-accuracy optical linear algebra processors are addressed with attention to three new aspects. These include: their application to the solution of finite-element problems; the first error-source models for component errors in such processors; and the first analysis of error sources in such processors.

Taylor, B. K.↗

Finite elements and the method of conjugate gradients on a concurrent processor

An algorithm for the iterative solution of finite element problems on a concurrent processor is presented. The method of conjugate gradients is used to solve the system of matrix equations, which is distributed among the processors of a MIMD computer according to an element-based spatial decomposition. This algorithm is implemented in a two-dimensional elastostatics program on the Caltech Hypercube concurrent processor. The results of tests on up to 32 processors show nearly linear concurrent speedup, with efficiencies over 90 percent for sufficiently large problems.

Lyzenga, G. A.↗

Direct finite element solution on an optical laboratory matrix-vector processor

The first optical laboratory system results employing a direct LU decomposition solution of a system of linear algebraic equations are presented for a finite element problem solution. This also represents the first laboratory demonstration of the use of sign-magnitude negative number representation as well as new bit partitioning techniques to increase the accuracy of an optical encoded processor beyond the number of bit channels available.

Casasent, David↗

Transient Finite Element Computations on a Variable Transputer System

A parallel program to analyze transient finite element problems was written and implemented on a system of transputer processors. The program uses the explicit time integration algorithm which eliminates the need for equation solving, making it more suitable for parallel computations. An interprocessor communication scheme was developed for arbitrary two dimensional grid processor configurations. Several 3-D problems were analyzed on a system with a small number of processors.

Smolinski, Patrick J.↗

Use of Simple Continuum Solutions in Finite Element Alternating Method for Fracture Problems

The performance of the finite element alternating (FEAM) method for two-dimensional crack problems is studied with respect to a polynomial pressure distribution fitted to the crack face stresses. The FEAM alternates between the analytical solution of crack in an infinite plate subjected to arbitrary polynomial distribution and a finite element solution of an uncracked body to satisfy the required boundary conditions in the crack problem. In this paper, the FEAM is applied to embedded crack and edge crack problems. For embedded crack problems, all of the constant, linear, and quadratic ( N=0,1, or 2, respectively) pressure distributions yield very accurate results with this algorithm with 4 to 5 iterations. The edge crack problems, on the other hand, require much higher order polynomials distributions (N=5 to 6) to yield accurate solutions. For slant edge crack problems, the mode-I stress-intensity factors have better accuracy than the mode-II stress-intensity factors for the same convergence tolerance.

Krishnamurthy, T.↗

Coupling finite and boundary element methods for two-dimensional potential problems

A finite element-boundary element (FE-BE) coupling method based on a weighted residual variational method is presented for potential problems, governed by either the Laplace or the Poisson equations. In this method, a portion of the domain of interest is modeled by finite elements (FE) and the remainder of the region by boundary elements (BE). Because the BE fundamental solutions are valid for infinite domains, a procedure that limits the effects of the BE fundamental solution to a small region adjacent to the FE region, called the transition region (TR), is developed. This procedure involves a judicious choice of functions called the transition (T) functions that have unit values on the BE-TR interface and zero values on the FE-TR interface. The present FE-BE coupling algorithm is shown to be independent of the extent of the transition region and the choice of the transition functions. Therefore, transition regions that extend to only one layer of elements between FE and BE regions and the use of simple linear transition functions work well.

Krishnamurthy, T.↗

The finite element duct eigenvalue problem - An improved formulation with Hermitian elements and no-flow condensation

Hermitian elements are used in a finite element solution for the eigenvalue problem in lined ducts with flow. These elements give significantly greater accuracy for reduced dimensionality when compared with Lagrangian elements. Spurious mode generation associated with the Lagrangian formulation is eliminated. A dramatic improvement in the ratio of the number of reliable eigenvalues to the total number of computed eigenvalues is effected by the use of a condensation scheme based on the no-flow eigenvectors. Results are presented for two dimensional and axisymmetric ducts. In the axisymmetric case good resolution is obtained even for high order, high frequency modes by the use of continuously graded meshes.

Astley, R. J.↗

A finite element based method for solution of optimal control problems

A temporal finite element based on a mixed form of the Hamiltonian weak principle is presented for optimal control problems. The mixed form of this principle contains both states and costates as primary variables that are expanded in terms of elemental values and simple shape functions. Unlike other variational approaches to optimal control problems, however, time derivatives of the states and costates do not appear in the governing variational equation. Instead, the only quantities whose time derivatives appear therein are virtual states and virtual costates. Also noteworthy among characteristics of the finite element formulation is the fact that in the algebraic equations which contain costates, they appear linearly. Thus, the remaining equations can be solved iteratively without initial guesses for the costates; this reduces the size of the problem by about a factor of two. Numerical results are presented herein for an elementary trajectory optimization problem which show very good agreement with the exact solution along with excellent computational efficiency and self-starting capability. The goal is to evaluate the feasibility of this approach for real-time guidance applications. To this end, a simplified two-stage, four-state model for an advanced launch vehicle application is presented which is suitable for finite element solution.

Bless, Robert R.↗

A Least-Squares Finite Element Method for Electromagnetic Scattering Problems

The least-squares finite element method (LSFEM) is applied to electromagnetic scattering and radar cross section (RCS) calculations. In contrast to most existing numerical approaches, in which divergence-free constraints are omitted, the LSFF-M directly incorporates two divergence equations in the discretization process. The importance of including the divergence equations is demonstrated by showing that otherwise spurious solutions with large divergence occur near the scatterers. The LSFEM is based on unstructured grids and possesses full flexibility in handling complex geometry and local refinement Moreover, the LSFEM does not require any special handling, such as upwinding, staggered grids, artificial dissipation, flux-differencing, etc. Implicit time discretization is used and the scheme is unconditionally stable. By using a matrix-free iterative method, the computational cost and memory requirement for the present scheme is competitive with other approaches. The accuracy of the LSFEM is verified by several benchmark test problems.

Wu, Jie↗

A Posteriori Bounds for Linear-Functional Outputs of Crouzeix-Raviart Finite Element Discretizations of the Incompressible Stokes Problem

We present a finite element technique for the efficient generation of lower and upper bounds to outputs which are linear functionals of the solutions to the incompressible Stokes equations in two space dimensions; the finite element discretization is effected by Crouzeix-Raviart elements, the discontinuous pressure approximation of which is central to our approach. The bounds are based upon the construction of an augmented Lagrangian: the objective is a quadratic "energy" reformulation of the desired output; the constraints are the finite element equilibrium equations (including the incompressibility constraint), and the intersubdomain continuity conditions on velocity. Appeal to the dual max-min problem for appropriately chosen candidate Lagrange multipliers then yields inexpensive bounds for the output associated with a fine-mesh discretization; the Lagrange multipliers are generated by exploiting an associated coarse-mesh approximation. In addition to the requisite coarse-mesh calculations, the bound technique requires solution only of local subdomain Stokes problems on the fine-mesh. The method is illustrated for the Stokes equations, in which the outputs of interest are the flowrate past, and the lift force on, a body immersed in a channel.

Patera, Anthony T.↗

Finite element methods for nonlinear elastostatic problems in rubber elasticity

A number of finite element methods for the analysis of nonlinear problems in rubber elasticity are outlined. Several different finite element schemes are discussed. These include the augmented Lagrangian method, continuation or incremental loading methods, and associated Riks-type methods which have the capability of incorporating limit point behavior and bifurcations. Algorithms for the analysis of limit point behavior and bifurcations are described and the results of several numerical experiments are presented. In addition, a brief survey of some recent work on modelling contact and friction in elasticity problems is given. These results pertain to the use of new nonlocal and nonlinear friction laws.

Oden, J. T.↗