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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4

Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability

Abstract Background Rock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their diversity and ecology, and further still, viruses in these communities have been largely unexplored despite important roles related to host metabolism and nutrient cycling. To begin to address this, we present a large-scale viral catalog from Antarctic rock microbial communities. Results We performed metagenomic analyses on rocks from across Antarctica representing a broad range of environmental and spatial conditions, and which resulted in a predicted viral catalog comprising > 75,000 viral operational taxonomic units (vOTUS). We found largely undescribed, highly diverse and spatially structured virus communities which had predicted auxiliary metabolic genes (AMGs) with functions indicating that they may be potentially influencing bacterial adaptation and biogeochemistry. Conclusion This catalog lays the foundation for expanding knowledge of virosphere diversity, function, spatial ecology, and dynamics in extreme environments. This work serves as a step towards exploring adaptability of microbial communities in the face of a changing climate.

59 BASIC BIOLOGICAL SCIENCES↗

Exploring the unknown Lambda-neutron interaction

No published \Lambda Λ n scattering data exist. A relativistic heavy-ion experiment has suggested that a \Lambda Λ nn bound state was seen. However, several theoretical analyses have cast serious doubt on the bound-state assertion. Nevertheless, there could exist a three-body \Lambda Λ nn resonance. Such a resonance could be used to constrain the \Lambda Λ n interaction. We discuss \Lambda Λ nn calculations using nn and \Lambda Λ n pairwise interactions of rank-one, separable form that fit effective range parameters of the nn system and those hypothesized for the as yet unobserved \Lambda Λ n system based upon four different \Lambda Λ N potentials. The use of rank-one separable potentials allows one to analytically continue the \Lambda Λ nn Faddeev equations onto the second complex energy plane in search of resonance poles, by examining the eigenvalue spectrum of the kernel of the Faddeev equations. Although each of the potential models predicts a \Lambda Λ nn sub-threshold resonance pole, scaling of the \Lambda Λ n interaction by as little as \sim ∼ 5% does produce a physical resonance. This suggests that one may use photo-(electro-)production of the \Lambda Λ nn system from tritium as a tool to examine the strength of the \Lambda Λ n interaction.

Gibson, Benjamin↗

Pushing the Limits of High-speed X-ray Tomography to See the Unknown

First-of-their kind datasets from a high-speed X-ray tomography system were collected, and a novel numerical effort utilizing temporal information to reduce measurement uncertainty was shown. The experimental campaign used three high-speed X-ray imaging systems to collect data at 100 kHz of a scene containing high-velocity objects. The scene was a group of known objects propelled by a 12-gauge shotgun shell reaching speeds of hundreds of meters per second. These data represent a known volume where the individual components are known, with experimental uncertainties that can be used for reconstruction algorithm validation. The numerical effort used synthetic volumes in MATLAB to produce projections along known lines of sight to perform tomographic reconstructions. These projections and reconstructions were performed on a single object at two orientations, representing two timesteps, to increase the reconstruction accuracy.

36 MATERIALS SCIENCE↗

Benchmark and Assessment of the Surrogate Reaction Method for Determining Unknown (n,n') and (n,2n) Reaction Cross Sections

A new approach for determining (n,n' ) and (n,2n) cross sections from a combination of indirect measurements and theory is presented. The method builds on and significantly extends the surrogate reactions framework developed at LLNL. Multiple theory advances are described and the overall approach is demonstrated through an application to benchmark cross sections. The work addresses nuclear data needs of the Stockpile Stewardship Program (SSP) and this report comprises multiple completion criteria for an ASC/PEM Level-2 milestone.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Illuminating the pathways to carbon liberation: a systems approach to characterizing the consequential unknowns of carbon transformation and loss from thawing permafrost peatlands (Final Report)

The IsoGenie3 Project delivered new systems-level insights into carbon cycling in thawing permafrost landscapes, with an emphasis on methane and carbon dioxide emissions. From >200 samples from the site collected over a decade, co-analyzed for geochemistry and microbiology, the team recovered ~1,500 assembled microbial genomes and ~1,900 viral population genomes, revealing appreciable genetic novelty - from a new highly abundant bacterial phylum, to novel methane consumers and their activities, to rampant viral novelty. IsoGenie3 linked these organisms to carbon compound transformations (which define the cycling of organic matter in soils, and the loss of the greenhouse gases carbon dioxide and methane), and saw that the microbes at each stage of permafrost thaw had different genetic potential to degrade categories of compounds, expressed that genetic potential differently, and actually transformed carbon compounds into greenhouse gases in different ways. IsoGenie 3 identified that some of the thaw-stage differences were due to plant-microbiome relationships; the plant species across the thaw gradient contributed different carbon compounds into the soil, and hosted distinct microbiota (differing among parts of plants as well as species). Lastly, microbes in the saturated post-thaw conditions appeared likely to contribute to the mobilization and toxification of mercury released during thaw. In parallel with ongoing field sampling and analysis, hypotheses arising from field observations were tested via lab incubation experiments. When communities are taken out of their native habitats, they behave differently, and the team first rigorously quantified the magnitude of this effect on microbiome composition and functional capacity, organic matter composition, and gas production; overall the main system processes were maintained in the lab incubations under the conditions tested. Further, the microbial data could inform geochemical reaction network models of those processes. Then, the team ran experiments with additions of compounds, varying temperature, and “live” vs. “dead” peat (the latter having been gamma irradiated, with a few additional variants to control for methodological artifacts). From these, we (a) determined the importance of plant-derived soluble phenolic compounds in bogs’ extraordinary recalcitrance of organic matter, and carbon gas emissions skewed to carbon dioxide; (b) proposed an abiotic ‘tanning’ mechanism, which could contribute to Sphagnum’s inhibitory effect on anaerobic decomposition through alteration of N availability. IsoGenie3 illuminated longer-term and landscape-scale interactions of permafrost thaw and carbon cycling, advancing knowledge of the drivers of methane dynamics not only across in the permafrost-associated peatland (where hydrology and plant communities dictate microbiomes) but also their interconnected lakes (where sediment carbon quality and resident microbiota are determined by position within lake, and lake features). By leveraging observations of site methane dynamics extending well before this project, the team was able to construct a 44-year portrait of the interplay of permafrost thaw, hydrology, vegetation dynamics, and carbon gas emissions, and the doubling of the fully-thawed fens over this time. From the detailed study of this focal site, IsoGenie3 also aimed to improve model representation of these kinds of sites and processes. To improve predictions of methane transformations, we incorporated acetate and isotope dynamics into the ‘DNDC’ biogeochemistry model. In addition, recovered genomes were grouped into ‘functional groups’, i.e. the genomes that perform a specific function of interest, then used to parameterize maximum growth rate and optimum growth temperature (via signatures in their sequence composition) for the BioCrunch model. The BioCrunch model was then in turn used to test the impact of increasing functional resolution of the microbes, on the carbon gas emissions. Lastly for modeling, the ecosys model was parameterized from the microbial and other data, and used to evaluate drivers of e.g. change in methane emissions. Finally, this project also led to the development of a range of new methods and tools, a new metric of organic matter decomposability, as well as a graph-database solution to multidisciplinary data storage and querying. This project’s ongoing analyses at our focal site also contributed to broader advancements in understanding elements of genetic plasticity and methane metabolism, climate change microbiology and community assembly, global peatland geochemistry and Arctic lakes’ roles in climate feedbacks.

54 ENVIRONMENTAL SCIENCES↗

Charting the unknown: A dive into the world of standards mapping

When you hear standards mapping what do you think about? For the Secure Software Central (SSC) project this means comparing our process to the National Institute of Standards and Technology’s (NIST) security control catalog. So how is it done? The project completed this summer can be broken down into three simple phases. Phase one consists of mapping the SSC process to the NIST’s security control catalog. While phase two entails mapping mitigations from a threat profile to NIST. Lastly phase three requires the creation of a knowledge base allowing for the reuse of controls across numerous projects This project presented a few different challenges: locating the correct control within the NIST catalog while correctly matching the proposed mitigations from the SSC team, accurately leveling the mitigation to the security level of the system, creating a toolbox to showcase a dataset of mitigations and standards to be used in current and future projects. each challenge allowed for opportunities in growth and understanding of how security controls can map to a governing set of standards. These standards maps are a crucial element to support the insights provided by the SSC team and allow the client to have confidence in the work being completed. My internship has allowed me to set and achieve many goals such as coming to understand that the field of cybersecurity truly is the right place for me. I have also learned that it’s ok to be wrong if you learn something from it. For significant accomplishments I have helped integrate standards mapping into the fabric of SSC. The field experience that I have gained such as interacting with the SSC team along with other senior staff and building a good rapport are crucial skills to. This time at PNNL has been an irreplaceable experience.

42 ENGINEERING↗

Ultra-High-Speed X-ray Tomography: Bridging the Gaps to See the Unknown

Rapid, time-varying, three-dimensional physics underpin numerous engineering challenges. Often, these physics occur within opaque environments, internal to a component, severely limiting applicable diagnostics. Development of novel diagnostics is necessary to understand and predict transient three-dimensional (3D) phenomena within opaque environments. This report highlights progress in four key areas leading to advancements in high-speed X-ray radiography and tomography. The first area is enabling MHz-rate imaging of energetics at the Advanced Photon Source at Argonne National Laboratory. The second is modeling a high-flux, rotating-anode X-ray source to understand the heat loads on the anode. The third effort was to develop a novel reconstruction algorithm that is validated by ground experimental tomography data and synthetic tomography data. The fourth is the development of a novel approach to two-color X-ray imaging.

42 ENGINEERING↗

Embracing the unknown: Why uncertainty matters in deep learning

Most cutting-edge deep learning models are focused on only one thing: improving prediction accuracy. But in the real world, especially in high-stakes domains like science, medicine, and safety (e.g. self-driving cars), knowing what your model doesn't know can be just as important. My goal for this talk is to convince you that uncertainty quantification (UQ) is essential in deep learning. We’ll explore how existing UQ methods work, what they still get wrong, and how ideas from disciplines like astrophysics and environmental science are key to driving the development of better (more trustworthy) deep learning methods.

Nevin, Becky [Fermilab]↗

Finding ways to reduce nuclear waste: searching for the unknown one step at a time

In my home country, Venezuela, research has been stagnant. Due to the political turmoil and the crisis, many educated people have left the country in search for a better life. This has caused a deficit in any technological and scientific advances, making Venezuela one of the first South American countries to have its rate of publications decline by 29% in 2013. Currently, Venezuela lacks the infrastructure and the means to keep up with the research progress as compared to other countries in South America, such as Brazil. Since coming to the United States (US), and currently working for a national laboratory, the active research environment endorses a wide range of careers and engineering programs that allow researchers to thrive at any given field. Researchers have access to funds and tools to succeed in developing materials for the future. There are 17 national laboratories in the US, and all of these have a different research focus/objective. As examples, Los Alamos National Laboratory and Sandia National Laboratory focus is on national homeland security, weapon science, radiation effects, among others. Argonne National Laboratory focuses on nuclear energy, energy storage, high performance computing, etc. At Idaho National Laboratory (INL) the research focuses on innovating nuclear energy and clean energy resources, critical infrastructure materials, along with fuel cycle solutions to manage, dispose and find ways to recycle current and future radiological waste. Compared to other national laboratories, INL focuses slightly more on applied processes and how nuclear energy can be innovated to next reactor design and technologies. The research being conducted at INL made me apply for a Seaborg distinguished postdoctoral position. For the position itself, the researcher must submit a proposal related to actinide chemistry on a research field area. In this position, 50% of my time will be focused on my own proposal. The proposal that I am working on is focused on the innovation of nuclear energy and fuel cycle recycling, which is why I was mainly interested on working at this national laboratory. To give a bit more context of what my proposal is about, a little bit of background is necessary: After the nuclear fuel (UO2) is used in a reactor, the fuel matrix is then characterized by various fission products (FP). Among these FP (including rare earth elements, alkali/alkaline earths, and actinides), many can potentially be recovered through nuclear reprocessing technologies. In pyroprocessing, the used nuclear fuel undergoes electrochemical dissolution into a molten chloride salt mixture in an electrorefiner. Initially, uranium is reduced onto an inert cathode by applied potentials. However, numerous remaining FPs accumulate in the melt and pose challenges for recovery by an inert electrode, particularly the rare earth elements (e.g., Nd, Gd, Pr, Sm) due to their multivalent oxidation states and tendencies toward side reactions, leading to their dissolution in the electrolyte. These recovery challenges result in inefficiencies and necessitate the continual discarding of the molten chloride salt, thereby generating additional waste. Furthermore, the presence of rare earth elements and other fission products in the molten salt electrolyte alters its physical and chemical properties, affecting both uranium recovery efficiency and the longevity of the molten chloride salt. To improve the recovery efficiency of the FP, specifically rare earth elements, I am investigating the fundamental interactions between rare earth elements in the molten chloride salt and their metallic form. The kinetic pathways and the chemical reactions of these elements will give insights on how the recovery efficiency can be improved. The interactions and speciation of these elements are being studied by spectro-electrochemistry at high temperature environments in quartz and other ceramic materials (e.g., alumina crucibles). Some of the challenges I am facing specifically relates the reactivity of some of these elements with different glass and crucible materials. Although my research focuses on fundamental science, it will benefit the applied process by generating new scientific knowledge and closing the gap for an efficient recycling of the waste: one step at a time.

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Knowing the unknown: The underestimation of monkeypox cases. Insights and implications from an integrative review of the literature

Monkeypox is an emerging zoonotic disease caused by the monkeypox virus, which is an infectious agent belonging to the genus Orthopoxvirus. Currently, commencing from the end of April 2022, an outbreak of monkeypox is ongoing, with more than 43,000 cases reported as of 23 August 2022, involving 99 countries and territories across all the six World Health Organization (WHO) regions. On 23 July 2022, the Director-General of the WHO declared monkeypox a global public health emergency of international concern (PHEIC), since the outbreak represents an extraordinary, unusual, and unexpected event that poses a significant risk for international spread, requiring an immediate, coordinated international response. However, the real magnitude of the burden of disease could be masked by failures in ascertainment and under-detection. As such, underestimation affects the efficiency and reliability of surveillance and notification systems and compromises the possibility of making informed and evidence-based policy decisions in terms of the adoption and implementation of ad hoc adequate preventive measures. In this review, synthesizing 53 papers, we summarize the determinants of the underestimation of sexually transmitted diseases, in general, and, in particular, monkeypox, in terms of all their various components and dimensions (under-ascertainment, underreporting, under-detection, under-diagnosis, misdiagnosis/misclassification, and under-notification).

59 BASIC BIOLOGICAL SCIENCES↗