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At least 721 records · Page 40

A simple model linking galaxy and dark matter evolution

We construct a simple phenomenological model for the evolving galaxy population by incorporating predefined baryonic prescriptions into a dark matter hierarchical merger tree. The model is based on the simple gas-regulator model introduced by Lilly et al., coupled with the empirical quenching rules of Peng et al. The simplest model already does quite well in reproducing, without re-adjusting the input parameters, many observables, including the main sequence sSFR-mass relation, the faint end slope of the galaxy mass function, and the shape of the star forming and passive mass functions. Similar to observations and/or the recent phenomenological model of Behroozi et al., which was based on epoch-dependent abundance-matching, our model also qualitatively reproduces the evolution of the main sequence sSFR(z) and SFRD(z) star formation rate density relations, the M{sub s} – M{sub h} stellar-to-halo mass relation, and the SFR – M{sub h} relation. Quantitatively the evolution of sSFR(z) and SFRD(z) is not steep enough, the M{sub s} – M{sub h} relation is not quite peaked enough, and, surprisingly, the ratio of quenched to star forming galaxies around M* is not quite high enough. We show that these deficiencies can simultaneously be solved by ad hoc allowing galaxies to re-ingest some of the gas previously expelled in winds, provided that this is done in a mass-dependent and epoch-dependent way. These allow the model galaxies to reduce an inherent tendency to saturate their star formation efficiency, which emphasizes how efficient galaxies around M* are in converting baryons into stars and highlights the fact that quenching occurs at the point when galaxies are rapidly approaching the maximum possible efficiency of converting baryons into stars.

79 ASTRONOMY AND ASTROPHYSICS↗

HYDRODYNAMIC SIMULATIONS OF H ENTRAINMENT AT THE TOP OF He-SHELL FLASH CONVECTION

We present the first three-dimensional, fully compressible gas-dynamics simulations in 4π geometry of He-shell flash convection with proton-rich fuel entrainment at the upper boundary. This work is motivated by the insufficiently understood observed consequences of the H-ingestion flash in post-asymptotic giant branch (post-AGB) stars (Sakurai's object) and metal-poor AGB stars. Our investigation is focused on the entrainment process at the top convection boundary and on the subsequent advection of H-rich material into deeper layers, and we therefore ignore the burning of the proton-rich fuel in this study. We find that for our deep convection zone, coherent convective motions of near global scale appear to dominate the flow. At the top boundary convective shear flows are stable against Kelvin-Helmholtz instabilities. However, such shear instabilities are induced by the boundary-layer separation in large-scale, opposing flows. This links the global nature of thick shell convection with the entrainment process. We establish the quantitative dependence of the entrainment rate on grid resolution. With our numerical technique, simulations with 1024{sup 3} cells or more are required to reach a numerical fidelity appropriate for this problem. However, only the result from the 1536{sup 3} simulation provides a clear indication that we approach convergence with regard to the entrainment rate. Our results demonstrate that our method, which is described in detail, can provide quantitative results related to entrainment and convective boundary mixing in deep stellar interior environments with very stiff convective boundaries. For the representative case we study in detail, we find an entrainment rate of 4.38 ± 1.48 × 10{sup –13} M {sub ☉} s{sup –1}.

79 ASTRONOMY AND ASTROPHYSICS↗

The chemical abundances of stars in the Halo (CASH) project. III. A new classification scheme for carbon-enhanced metal-poor stars with s-process element enhancement

We present a detailed abundance analysis of 23 elements for a newly discovered carbon-enhanced metal-poor (CEMP) star, HE 0414−0343, from the Chemical Abundances of Stars in the Halo Project. Its spectroscopic stellar parameters are T{sub eff} = 4863 K, logg=1.25, ξ = 2.20 km s{sup −1}, and [Fe/H] = −2.24. Radial velocity measurements covering seven years indicate HE 0414−0343 to be a binary. HE 0414−0343 has [C/Fe]=1.44 and is strongly enhanced in neutron-capture elements but its abundances cannot be reproduced by a solar-type s-process pattern alone. Traditionally, it could be classified as a “CEMP-r/s” star. Based on abundance comparisons with asymptotic giant branch (AGB) star nucleosynthesis models, we suggest a new physically motivated origin and classification scheme for CEMP-s stars and the still poorly understood CEMP-r/s. The new scheme describes a continuous transition between these two so-far distinctly treated subgroups: CEMP-sA, CEMP-sB, and CEMP-sC. Possible causes for a continuous transition include the number of thermal pulses the AGB companion underwent, the effect of different AGB star masses on their nucleosynthetic yields, and physics that is not well approximated in 1D stellar models such as proton ingestion episodes and rotation. Based on a set of detailed AGB models, we suggest the abundance signature of HE 0414−0343 to have arisen from a >1.3 M{sub ⊙} mass AGB star and a late-time mass transfer that transformed HE 0414−0343 into a CEMP-sC star. We also find that the [Y/Ba] ratio well parametrizes the classification and can thus be used to easily classify any future such stars.

79 ASTRONOMY AND ASTROPHYSICS↗

A generic biokinetic model for noble gases with application to radon

The International Commission for Radiological Protection (ICRP) currently uses a dose conversion coefficient to calculate effective dose per unit exposure to radon and its progeny. The coefficient is derived by dividing the detriment associated with unit exposure to radon, as estimated from epidemiological studies, by the detriment per unit effective dose, as estimated mainly from atomic bomb survivor data and animal studies. In a recent statement the ICRP indicated that future guidance on exposure to radon and its progeny will be developed in the same way as guidance for any other radionuclide. That is, intake of radon and progeny will be limited on the basis of effective dose coefficients derived from biokinetic and dosimetric models. This paper proposes a biokinetic model for systemic (absorbed) radon for use in the calculation of dose coefficients for inhaled or ingested radon. The model is based largely on physical laws governing transfer of a non-reactive and soluble gas between materials. Model predictions are shown to be consistent with results of controlled studies of the fate of internally deposited radon in human subjects.

radon progeny effective dose biokinetic model↗

Age and gender specific biokinetic model for strontium in humans

A biokinetic model for strontium in humans is necessary for quantification of internal doses due to strontium radioisotopes. The ICRP-recommended biokinetic model for strontium has limitation for use in a population study, because it is not gender specific and does not cover all age ranges. The extensive Techa River data set on 90Sr in humans (tens of thousands of measurements) is a unique source of data on long-term strontium retention for men and women of all ages at intake. These, as well as published data, were used for evaluation of age- and gender-specific parameters for a new compartment biokinetic model for strontium (Sr-AGe model). The Sr-AGe model has similar structure as the ICRP model for the alkaline earth elements. The following parameters were mainly reevaluated: gastro-intestinal absorption and parameters related to the processes of bone formation and resorption defining calcium and strontium transfers in skeletal compartments. The Sr-AGe model satisfactorily describes available data sets on strontium retention for different kinds of intake (dietary and intravenous) at different ages (0–80 years old) and demonstrates good agreement with data sets for different ethnic groups. The Sr-AGe model can be used for dose assessment in epidemiological studies of general population exposed to ingested strontium radioisotopes.

age dependence↗

The polonium-210 poisoning of Mr Alexander Litvinenko

Mr Litvinenko died on 23rd November 2006 after having been poisoned with polonium-210 on 1st November. Measurements of the polonium-210 content of post-mortem tissue samples and samples of urine and blood showed the presence of large amounts of 210 Po. Furthermore, autoradiography of hair samples showed two regions of 210Po activity, providing evidence of an earlier poisoning attempt during October 2006, resulting in absorption to blood of about one-hundredth of that estimated for 1st November. Intake by ingestion on 1st November was estimated to be around 4 GBq, assuming 10% absorption to blood, and the resulting organ doses reached estimated values that were generally in a range from about 20 Gy to over 100 Gy. In comparison with estimates of protracted alpha particle the doses required to cause irreversible organ damage support the conclusion that death was the inevitable consequence of multiple organ failure, with destruction of the haemopoietic bone marrow, as well as damage to kidneys and liver, being important contributors. If the earlier poisoning during October 2006 had not been followed by a second major intake on 1st November, it is possible that the earlier intake of around 40 MBq, with absorption of 4 MBq to blood, might have proved fatal over a prolonged period of months or years, primarily as a result of kidney damage following a dose of approaching 3 Gy.

61 RADIATION PROTECTION AND DOSIMETRY↗

An age- and sex-specific biokinetic model for radon *

Publication 137 of the International Commission on Radiological Protection (ICRP) describes a biokinetic model for radon used to derive dose coefficients for occupational intake of radon isotopes. The model depicts transfer of inhaled or ingested radon to blood, exchange of radon between blood and tissues, and gradual loss of radon from the body based on physical laws governing transfer of a non-reactive and soluble gas between materials. Here, this paper describes an age- and sex-specific variation of that model developed for use in an upcoming ICRP series of reports on environmental intake of radionuclides by members of the public titled ‘Dose Coefficients for Intakes of Radionuclides by Members of the Public’. The proposed model modifies the model structure and transfer coefficients presented in Publication 137 to allow more realistic dosimetric treatment of bone marrow and breast and expands the model to address pre-adult ages, based on the physical principles used in the development of the model of Publication 137 together with anatomical and physiological changes occurring during human development.

61 RADIATION PROTECTION AND DOSIMETRY↗

EVIDENCE OF A DISTINCT STELLAR POPULATION IN THE COUNTERROTATING CORE OF NGC 1700

We find a distinct stellar population in the counterrotating and kinematically decoupled core of the isolated massive elliptical galaxy NGC 1700. Coinciding with the edge of this core, we find a significant change in the slope of the gradient of various representative absorption line indices. Our age estimate for this core is markedly younger than the main body of the galaxy. We find lower values for the age, metallicity, and Mg/Fe abundance ratio in the center of this galaxy when we compare them with other isolated elliptical galaxies with similar velocity dispersion. We discuss the different possible scenarios that might have lead to the formation of this younger kinematically decoupled structure and conclude that, in light of our findings, the ingestion of a small stellar companion on a retrograde orbit is the most favored.

79 ASTRONOMY AND ASTROPHYSICS↗

BD+48 740-Li OVERABUNDANT GIANT STAR WITH A PLANET: A CASE OF RECENT ENGULFMENT?

We report the discovery of a unique object, BD+48 740, a lithium overabundant giant with A(Li) = 2.33 {+-} 0.04 (where A(Li) = log n{sub Li}/n{sub H} + 12), that exhibits radial velocity (RV) variations consistent with a 1.6 M{sub J} companion in a highly eccentric, e = 0.67 {+-} 0.17, and extended, a 1.89 AU (P = 771 days), orbit. The high eccentricity of the planet is uncommon among planetary systems orbiting evolved stars and so is the high lithium abundance in a giant star. The ingestion by the star of a putative second planet in the system originally in a closer orbit could possibly allow for a single explanation to these two exceptional facts. If the planet candidate is confirmed by future RV observations, it might represent the first example of the remnant of a multiple planetary system recently affected by stellar evolution.

79 ASTRONOMY AND ASTROPHYSICS↗

Making Common Fund data more findable: catalyzing a data ecosystem

The Common Fund Data Ecosystem (CFDE) has created a flexible system of data federation that enables researchers to discover datasets from across the US National Institutes of Health Common Fund without requiring that data owners move, reformat, or rehost those data. This system is centered on a catalog that integrates detailed descriptions of biomedical datasets from individual Common Fund Programs’ Data Coordination Centers (DCCs) into a uniform metadata model that can then be indexed and searched from a centralized portal. This Crosscut Metadata Model (C2M2) supports the wide variety of data types and metadata terms used by individual DCCs and can readily describe nearly all forms of biomedical research data. We detail its use to ingest and index data from 11 DCCs.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Volatiles from the necrophagous fly Cochliomyia macellaria (Diptera: Calliphoridae) as indicators of Salmonella exposure

Blow flies (Diptera: Calliphoridae) are crucial in forensic investigations due to their association with both living and dead humans and other animals. Additionally, their interactions with various resources and potential as vectors of pathogens of humans and other animals, thus, make them potential tools for biosurveillance. This study investigated the potential of monitoring volatile organic compounds (VOCs) emitted by blow flies exposed to Salmonella as a method for pathogen surveillance. Adult blow flies ( Cochliomyia macellaria ) were exposed, or not, to Salmonella enterica . Following exposure, VOCs released by the blow flies were collected and analyzed using gas chromatography-mass spectrometry (GC-MS). Results indicate a treatment by time interaction (P < 0.01). Indicator species analysis identified a single compound significantly associated with S. enterica exposure (P = 0.02), Nonane, 2,2,4,4,6,8,8-heptamethyl, potentially indicating an immune system response. Given a compound indicating exposure was detected, future research should determine if more replicates could detect more differences after Salmonella ingestion. This research highlights the potential of blow flies as biosurveillance tools and the potential value of volatiles for assessing their exposure to pathogens.

59 BASIC BIOLOGICAL SCIENCES↗

NuGrid stellar data set – II. Stellar yields from H to Bi for stellar models with MZAMS = 1–25 M⊙ and Z = 0.0001–0.02

We provide here a significant extension of the NuGrid Set 1 models in mass coverage and towards lower metallicity, adopting the same physics assumptions. The combined data set now includes the initial masses M ZAMS /M ⊙ = 1, 1.65, 2, 3, 4, 5, 6, 7, 12, 15, 20, 25 for Z = 0.02, 0.01, 0.006, 0.001, 0.0001 with α-enhanced composition for the lowest three metallicities. These models are computed with the MESA stellar evolution code and are evolved up to the AGB, the white dwarf stage, or until core collapse. The nucleosynthesis was calculated for all isotopes in post-processing with the NuGrid MPPNP code. Explosive nucleosynthesis is based on semi-analytic 1D shock models. Metallicity-dependent mass-loss, convective boundary mixing in low- and intermediate-mass models and H and He core burning massive star models are included. Convective O-C shell mergers in some stellar models lead to the strong production of odd-Z elements P, Cl, K, and Sc. In AGB models with hot dredge-up, the convective boundary mixing efficiency is reduced to accommodate for its energetic feedback. In both low-mass and massive star models at the lowest metallicity, H-ingestion events are observed and lead to i-process nucleosynthesis and substantial 15 N production. Finally, complete yield data tables, derived data products and online analytic data access are provided.

79 ASTRONOMY AND ASTROPHYSICS↗

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

Abstract Bridging the gap between genetic variations, environmental determinants, and phenotypic outcomes is critical for supporting clinical diagnosis and understanding mechanisms of diseases. It requires integrating open data at a global scale. The Monarch Initiative advances these goals by developing open ontologies, semantic data models, and knowledge graphs for translational research. The Monarch App is an integrated platform combining data about genes, phenotypes, and diseases across species. Monarch's APIs enable access to carefully curated datasets and advanced analysis tools that support the understanding and diagnosis of disease for diverse applications such as variant prioritization, deep phenotyping, and patient profile-matching. We have migrated our system into a scalable, cloud-based infrastructure; simplified Monarch's data ingestion and knowledge graph integration systems; enhanced data mapping and integration standards; and developed a new user interface with novel search and graph navigation features. Furthermore, we advanced Monarch's analytic tools by developing a customized plugin for OpenAI’s ChatGPT to increase the reliability of its responses about phenotypic data, allowing us to interrogate the knowledge in the Monarch graph using state-of-the-art Large Language Models. The resources of the Monarch Initiative can be found at monarchinitiative.org and its corresponding code repository at github.com/monarch-initiative/monarch-app.

60 APPLIED LIFE SCIENCES↗

VirJenDB: a FAIR (meta)data and bioinformatics platform for all viruses

High-throughput sequencing has generated an unprecedented volume of data. However, researcher-submitted data in repositories requires extensive curation and quality control for reuse. These tasks are hindered by the multiplicity of repositories, the sheer volume of the data, and the complexity of virus (meta)data curation. To address these challenges, VirJenDB offers a user-friendly platform to facilitate versioned, community-driven curation, and ontology development. Virus sequences were ingested from 16 sources, including ~200 fields of metadata or standards, covering taxonomy, sample, and host information. Up to 85 metadata fields have undergone at least one round of curation, and are linked to 15.4 million virus sequences, with 88 % from those infecting eukaryotes and the remaining infecting prokaryotes. Subsets were created, including a novel collection of 0.91 million viral operational taxonomic unit (vOTU) sequences across all viruses, while keeping the original sequences from each vOTU to facilitate downstream analyses, e.g. sequence variation. The VirJenDB web portal (https://www.virjendb.org) provides HTTPS and Application Programming Interface (API) access to the sequence datasets and metadata, offering a search engine, filtering, download, visualizations, and documentation. VirJenDB aims to connect the phage and eukaryotic virus research communities by supporting webtool integration, meta-analyses, and metadata schema extensions.

Saghaei, Shahram↗

Coefficients for Estimating Prenatal Dose in Pregnant Workers from Acute Intakes

Inhalation and ingestion dose coefficients for the embryo and fetus from intakes of radionuclides by the mother are provided in the International Commission on Radiological Protection (ICRP) Publication 88 for intake of each of 74 radionuclides. To address the many other possible radionuclides to which workers may be exposed, effective dose coefficients were developed for the embryo/fetus for all additional radionuclides addressed in ICRP Publication 107 with half-life of 10 min or more. The general approach was to use the estimated dose to the mother’s uterus during pregnancy as a scalable proxy for the dose to the embryo/fetus. The set of scaling factors used in the study was derived from analyses of the relationships of the dose to the mother’s uterus and the effective dose to the embryo/fetus for the ~400 cases (considering two intake modes and multiple forms of many of the radionuclides) addressed in Publication 88.

61 RADIATION PROTECTION AND DOSIMETRY↗

Site-Specific Reference Person Parameters and Derived Concentration Standards for the Savannah River Site

The U.S. Department of Energy Order 458.1 states that the compliance with the 1 mSv annual dose constraint to a member of the public may be demonstrated by calculating dose to the maximally exposed individual (MEI) or to a representative person. Historically, the MEI concept was used for dose compliance at the Savannah River Site (SRS) using adult dose coefficients and adult male usage parameters. For future compliance, SRS plans to use the representative person concept for dose estimates to members of the public. The representative person dose will be based on the reference person dose coefficients from the U.S. DOE Derived Concentration Technical Standard and on usage parameters specific to SRS for the reference and typical person. Usage parameters and dose coefficients were determined for inhalation, ingestion and external exposure pathways. The parameters for the representative person were used to calculate and tabulate SRS-specific derived concentration standards (DCSs) for the pathways not included in DOE-STD-1196-2011.

54 ENVIRONMENTAL SCIENCES↗

Comparison of U.S. Environmental Protection Agency’s CAP88 PC versions 3.0 and 4.0

The Savannah River National Laboratory (SRNL) with the assistance of Georgia Regents University, completed a comparison of the U.S. Environmental Protection Agency's (EPA) environmental dosimetry code CAP88 PC V3.0 with the recently developed V4.0. CAP88 is a set of computer programs and databases used for estimation of dose and risk from radionuclide emissions to air. At the U.S. Department of Energy's Savannah River Site, CAP88 is used by SRNL for determining compliance with EPA's National Emission Standards for Hazardous Air Pollutants (40 CFR 61, Subpart H) regulations. Using standardized input parameters, individual runs were conducted for each radionuclide within its corresponding database. Some radioactive decay constants, human usage parameters, and dose coefficients changed between the two versions, directly causing a proportional change in the total effective 137 Cs, 3 H, 129 I, 239 Pu, and 90 Sr) is provided. In general, the total effective doses will decrease for alpha/beta emitters because of reduced inhalation and ingestion rates in V4.0. However, for gamma emitters, such as 60 Co and 137 Cs, the total effective doses will increase because of changes EPA made in the external ground shine calculations.

54 ENVIRONMENTAL SCIENCES↗

Dosimetry is Key to Good Epidemiology: Workers at Mallinckrodt Chemical Works had Seven Different Source Exposures

Mallinckrodt Chemical Works was the earliest uranium processing facility in the Manhattan Project, beginning in 1942. Even then, concern existed about possible health effects resulting from exposure to radiation and pitchblende dust. This concern was well founded as the facility processed Belgian Congo pitchblende ore that was up to 60% pure uranium with high 235 U content and up to 100 mg of radium per ton. Workers were exposed to external gamma radiation plus internal radiation from inhalation and ingestion of pitchblende dust (uranium, radium, and silica). Multiple sources of exposure were available for organ dose reconstruction to a degree unique for an epidemiologic study. Personal film badge measures available from 1945 captured external exposures. Additional external exposure included 15,518 occupational medical x-rays and 210 radiation exposure records from other facilities outside of Mallinckrodt employment. Organ dose calculations considered organ-specific coefficients that account for photon energy and job-specific orientation of workers to the radiation source during processing. Intakes of uranium and radium were based on 39,451 uranium urine bioassays and 2,341 breath radon measurements, and International Commission on Radiological Protection (ICRP) Publication 68 biokinetic models were used to estimate organ-specific radiation absorbed dose. Estimates of exposure to airborne radon and its short-lived progeny were based on radon measurements in work areas where radium-containing materials were handled or stored, together with estimated exposure times in these areas based on job titles. Dose estimates for radon and its short-lived progeny were based on models and methods recently recommended in ICRP Publication 137. This comprehensive dosimetric approach follows methods outlined by the National Council on Radiation Protection Scientific Committee 6-9 for the Million Worker Study. Annual doses were calculated for six organs: lung, brain, heart, kidney, colon and red bone marrow. Finally, evaluation and adjustment for individual cumulative measures of pitchblende dust inhalation were made for lung and kidney diseases.

61 RADIATION PROTECTION AND DOSIMETRY↗