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At least 739 records · Page 41

Ionic liquid structure, dynamics, and electrosorption in carbon electrodes with bimodal pores and heterogeneous surfaces

In this paper, we investigate the aggregation, diffusion, and resulting electrochemical behavior of ionic liquids inside carbon electrodes with complex pore architectures and surface chemistries. Carbide-derived carbons (CDCs) with bimodal porosities and defunctionalized or oxidized electrode surfaces served as model electrode materials. Our goal was to obtain a fundamental understanding of room-temperature ionic liquid ion orientation, mobility, and electrosorption behavior. Neat 1-octyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide confined in CDCs was studied using an integrated experimental and modeling approach, consisting of quasielastic neutron scattering, small-angle neutron scattering, X-ray pair distribution function analysis, and electrochemical measurements, which were combined with molecular dynamics simulations. Our analysis shows that surface oxygen groups increase the diffusion of confined electrolytes. Consequently, the ions become more than twice as mobile in oxygen-rich pores. Although greater self-diffusion of ions translates into higher electrochemical mobilities in oxidized pores, bulk-like behavior of ions dominates in the larger mesopores and increases the overall capacitance in defunctionalized pores. Experimental results highlight strong confinement and surface effects of carbon electrodes on electrolyte behavior, and molecular dynamics simulations yield insight into diffusion and capacitance differences in specific pore regions. Finally, we demonstrate the significance of surface defects on electrosorption dynamics of complex electrolytes in hierarchical pore architectures of supercapacitor electrodes.

36 MATERIALS SCIENCE↗

Structural and functional analyses of SARS-CoV-2 Nsp3 and its specific interactions with the 5’ UTR of the viral genome

ABSTRACT Non-structural protein 3 (Nsp3) is the largest open reading frame encoded in the SARS-CoV-2 genome, essential for the formation of double-membrane vesicles (DMV) wherein viral RNA replication occurs. We conducted an extensive structure-function analysis of Nsp3 and determined the crystal structures of the ubiquitin-like 1 (Ubl1), nucleic acid binding (NAB), β-coronavirus-specific marker (βSM) domains, and a sub-region of the Y domain of this protein. We show that the Ubl1, ADP-ribose phosphatase (ADRP), human SARS Unique (HSUD), NAB, and Y domains of Nsp3 bind the 5’ UTR of the viral genome and that the Ubl1 and Y domains possess affinity for recognition of this region, suggesting high specificity. The Ubl1-Nucleocapsid (N) protein complex binds the 5’ UTR with greater affinity than the individual proteins alone. Our results suggest that multiple domains of Nsp3, particularly Ubl1 and Y, shepherd the 5’ UTR of the viral genome during translocation through the DMV membrane, priming the Ubl1 domain to load the genome onto N protein. IMPORTANCE The largest protein encoded by the SARS-CoV-2 genome is Nsp3. In infected cells, this multi-domain protein forms a pore structure in the virus-induced double-membrane vesicles (DMV). We have incomplete data on Nsp3 molecular structure, and here, we describe crystal structures for multiple domains of Nsp3. It is thought that newly replicated viral RNA transits through the DMV pore; however, we possess incomplete data on which regions of Nsp3 actually interact with RNA. Here, we present data showing that five domains of Nsp3 interact with the 5’ UTR of the SARS-CoV-2 RNA, including the Y domain for which no function has ever been discovered. These data suggest that the pore structure plays an active role in recognizing the terminal end of the genome, transiting and loading the viral RNA onto the cytoplasmic nucleocapsid protein. These data help expand our knowledge of Nsp3 structure and function and the SARS-CoV-2 replication cycle.

Microbiology↗

Elucidating Primary Degradation Mechanisms in High-Cycling-Capacity, Compositionally Tunable High-Entropy Hydrides

The hydrogen sorption properties of single-phase bcc (TiVNb) 100–x Cr x alloys (x = 0–35) are reported. All alloys absorb hydrogen quickly at 25 °C, forming fcc hydrides with storage capacity depending on the Cr content. Here, a thermodynamic destabilization of the fcc hydride is observed with increasing Cr concentration, which agrees well with previous compositional machine learning models for metal hydride thermodynamics. The steric effect or repulsive interactions between Cr–H might be responsible for this behavior. The cycling performances of the TiVNbCr alloy show an initial decrease in capacity, which cannot be explained by a structural change. Pair distribution function analysis of the total X-ray scattering on the first and last cycled hydrides demonstrated an average random fcc structure without lattice distortion at short-range order. If the as-cast alloy contains a very low density of defects, the first hydrogen absorption introduces dislocations and vacancies that cumulate into small vacancy clusters, as revealed by positron annihilation spectroscopy. Finally, the main reason for the capacity drop seems to be due to dislocations formed during cycling, while the presence of vacancy clusters might be related to the lattice relaxation. Having identified the major contribution to the capacity loss, compositional modifications to the TiVNbCr system can now be explored that minimize defect formation and maximize material cycling performance.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Decomposition of W(CO)[subscript 6] at high pressures and temperatures

The decomposition of hexacarbonyltungsten, W(CO){sub 6}, has been studied. The decomposition was induced by heating W(CO){sub 6} in an autoclave at 523 K and pressures up to 1.8 MPa, and by laser heating in a diamond anvil cell at pressures between 5 and 18 GPa. The products have been characterized using synchrotron X-ray diffraction, pair distribution function analysis, Raman spectroscopy and scanning electron microscopy. Decomposition in the autoclave at the lower pressures resulted in the formation of a metastable tungsten carbide, W{sub 2}C, with an average particle size of 1-2 nm, and an unidentified nanocrystalline tungsten oxide and nanocrystalline graphite with average particle sizes of 1-2 and 11 nm, respectively. The existence of nanocrystalline graphite was deduced from micro-Raman spectra and the graphite particle size was extracted from the intensities of the Raman modes. The high-pressure decomposition products obtained in the diamond anvil cell are the monoclinic tungsten oxide phase WO{sub 2} and the high-pressure phase W{sub 3}O{sub 8}(I). The approximate average size of the graphite particles formed here was 6-8 nm. The bulk modulus of W(CO){sub 6} is B{sub 0} {approx_equal} 13 GPa.

36 MATERIALS SCIENCE↗

Size and Crystallinity in Protein-Templated Inorganic Nanoparticles

Protein cages such as ferritins and virus capsids have been used as containers to synthesize a wide variety of protein-templated inorganic nanoparticles. While identification of the inorganic crystal phase has been successful in some cases, very little is known about the detailed nanoscale structure of the inorganic component. We have used pair distribution function analysis of total X-ray scattering to measure the crystalline domain size in nanoparticles of ferrihydrite, {gamma}-Fe{sub 2}O{sub 3}, Mn{sub 3}O{sub 4}, CoPt, and FePt grown inside 24-meric ferritin cages from H. sapiens and P. furiosus. The material properties of these protein-templated nanoparticles are influenced by processes at a variety of length scales: the chemistry of the material determines the precise arrangement of atoms at very short distances, while the interior volume of the protein cage constrains the maximum nanoparticle size attainable. At intermediate length scales, the size of coherent crystalline domains appears to be constrained by the arrangement of crystal nucleation sites on the interior of the cage. On the basis of these observations, some potential synthetic strategies for the control of crystalline domain size in protein-templated nanoparticles are suggested.

59 BASIC BIOLOGICAL SCIENCES↗

An uncertainty-focused database approach to extract spatiotemporal trends from qualitative and discontinuous lake-status histories

Changes in lake status are often interpreted as palaeoclimate indicators due to their dependence on precipitation and evaporation. The Global Lake Status Database (GLSDB) has since long provided a standardised synopsis of qualitative lake status over the last 30,000 14C years. Potential sources of uncertainty however are not recorded in the GLSDB. Here we present an updated and improved relational-database framework that incorporates uncertainty in both chronology and the interpretation of palaeoenvironmental data. The database uses peer-reviewed palaeolimnological studies to produce a consensus on qualitative lake-status histories, whose chronologies are revised and standardized through the recalibration of radiocarbon dates and the application of Bayesian age-depth modelling for stratigraphic archives. Quantitative information on absolute water-level elevation is preserved if available from geomorphological sources. We also propose a new probabilistic analytical framework that accounts for these uncertainties to reconstruct synoptic, integrated environmental signals. The process is based on a Monte Carlo algorithm that iteratively samples individual lake-status histories within the limits of their uncertainties to produce many possible scenarios. We then use Recursively-Subtracted Empirical Orthogonal Function analysis to extract dominant patterns of lake-status variability from these scenarios. As a proof of concept, we apply this framework to 67 sites in eastern and southern Africa whose lake-status histories cover part of the late Pleistocene and/or Holocene. We show that, despite the sometimes large temporal and interpretation uncertainties, and the inclusion of highly discontinuous lake-status time series, identifying the major known millennial-scale climatic phases during the last 20,000 years is possible. Our framework was also able to identify an antiphased response between the lake basins in eastern and interior southern Africa to these changes. Here, we propose that our new database and methodology framework serves as a template for efficient lake-status data synthesis, encourages the incorporation of lake-status data in palaeoclimate syntheses, and expands the possibilities for the use of such data in the evaluation of climate models.

58 GEOSCIENCES↗

Industrialization of Hydrogen Getter for Nuclear Waste Transportation Application - 18189

The hydrogen risk generated by radiolysis of organic compounds during a nuclear waste transport is a major issue. The use of irreversible getters is considered to limit this risk. We previously worked on MnO{sub 2}/Ag{sub 2}O getter, in order to better understand the trapping phenomenon and to ensure its reliability. We demonstrated that chemisorption of hydrogen, which is required for its application, has been shown by using several characterization techniques. Proton insertion mechanism in MnO{sub 2} has been elucidated by pair distribution function analysis. Gamma irradiation up to 4 MGy has been performed on MnO{sub 2}/Ag{sub 2}O hydrogen getter and shown that chemical and crystallographic properties are not influenced under gamma irradiation. After those fundamentals studies, industrialization of MnO{sub 2}/Ag{sub 2}O getter preparation has been studied in order to have available getter materials for industrial applications with large amounts of MnO{sub 2}/Ag{sub 2}O powder. The preparation of hydrogen getter at laboratory scale consists of mixing commercial powders with various chemical treatments (grounding, moistening, sonication and drying). The industrialization strategy consists of preparing firstly on a laboratory scale and then increasing the getter preparation up to several kilograms. At each preparation step, hydrogen trapping experiments are performed to confirm the expected performance of getter materials. Several characterizations techniques have been performed (X-Ray Diffraction, Specific Surface Area...) to analyse the properties of the getter and have shown that no impact of upscale preparation is evidenced. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

On the Ordering Mechanism of Cu + in 2D van der Waals Multiferroic CuCrP 2 S 6

CuCrP 2 S 6 is a van der Waals multiferroic where the tunable Cu + sublattice underpins its exceptional ferroelectric and electronic switching properties. Yet, the microscopic mechanism governing Cu + ordering has remained elusive. Here, we combine single-crystal X-ray and neutron diffraction with pair distribution function analysis to uncover a temperature-driven evolution of Cu + ordering, giving rise to an incommensurate quasi-antipolar phase between the paraelectric and antiferroelectric states. The modulation originates from correlated Cu + occupancy redistribution coupled to breathing distortion of surrounding S 3 triangles, establishing a symmetry-adapted lattice distortion mode. Diffuse scattering persisting over 35 K above the transition confirms that the structural instability follows an order-disorder mechanism. The spontaneous off-centering of Cu + positions CuCrP 2 S 6 as a model platform for correlated order-disorder phenomena in 2D layered ferroics, and provides design principles for next-generation memory and logic devices.

ferroelectrics↗

Very Long Baseline polarimetry and the γ -ray connection in Markarian 421 during the broadband campaign in 2011

Context. This is the third paper in a series devoted to the analysis of the multiwavelength data from a campaign on the nearby (z = 0.03) TeV blazar Mrk 421 during 2011. Aims. In this study, we investigate the structure of the high angular resolution polarization, the magnetic topology, the total intensity light curve, the γ-ray flux, and the photon index. We describe how they evolve and how they are connected. Methods. We analyzed data in polarized intensity obtained with the Very Long Baseline Array (VLBA) at twelve epochs (one observation per month from January to December 2011) at 15, 24, and 43 GHz. For the absolute orientation of the electric vector position angles (EVPA) we used the D-terms method; we also confirm its accuracy. We also used γ-ray data from the Fermi Large Area Telescope on weekly time bins throughout 2011. Results. The source shows polarized emission, and its properties vary with time, frequency, and location along the jet. The core mean polarization fraction is generally between 1% and 2%, with a 4% peak at 43 GHz in March; the polarization angle is variable, mainly at 15 GHz, where it changes frequently, and less so at 43 GHz, where it oscillates in the range 114°-173°. The jet polarization properties are more stable, with a fractional polarization of around 16% and a polarization angle nearly perpendicular to the jet axis. The average flux and photon index at γ-ray energies are (17.4 ± 0.5) × 10 -8 ph cm -2 s -1 and Γ = 1.77 ± 0.02. The γ-ray light curve shows variability, with a main peak of (38 ± 11) × 10 -8 ph cm -2 s -1 at the beginning of March and two later peaks centered on September 8 and November 13. The first γ-ray peak appears to be associated with the peak in the core polarized emission at 43 GHz, as well as with the total intensity light curve. A discrete correlation function analysis yields a correlation coefficient of 0.54 at zero delay, with a significance level >99.7%. Conclusions. With this multifrequency study, we accurately determine the polarization properties of Mrk 421, both in the core and in the jet region. The radio and γ-ray light curves are correlated. The observed EVPA variability at 15 GHz is partly due to opacity and partly to a variable Faraday rotation effect. Finally, to explain the residual variability of the intrinsic polarization angle and the low degree of polarization in the core region, we invoke a blend of variable cross-polarized subcomponents with different polarization properties within the beam.

79 ASTRONOMY AND ASTROPHYSICS↗

Linking local structure and properties in perovskites containing equal concentrations of manganese and ruthenium

The local structures of six perovskite compounds containing equal amounts of manganese and ruthenium on the B-site have been investigated by neutron and x-ray pair distribution function analysis. The compounds SrMn{sub 0.5}Ru{sub 0.5}O{sub 3}, Sr{sub 0.5}Ca{sub 0.5}Mn{sub 0.5}Ru{sub 0.5}O{sub 3}, and CaMn{sub 0.5}Ru{sub 0.5}O{sub 3} were studied to investigate the effects of pure chemical pressure on the local structure and valency ratio between Mn{sup 3+}/Ru{sup 5+} and Mn{sup 4+}/Ru{sup 4+}. Reverse Monte Carlo simulations confirm that there is a shift in the B-site cation charge distribution from nearly equal amounts of Mn{sup 3+}, Ru{sup 5+}, Mn{sup 4+}, and Ru{sup 4+} for SrMn{sub 0.5}Ru{sub 0.5}O{sub 3} to primarily Mn{sup 4+} and Ru{sup 4+} for CaMn{sub 0.5}Ru{sub 0.5}O{sub 3}. The compounds Ba{sub 0.5}La{sub 0.5}Mn{sub 0.5}Ru{sub 0.5}O{sub 3}, Ca{sub 0.5}La{sub 0.5}Mn{sub 0.5}Ru{sub 0.5}O{sub 3}, and Sr{sub 0.5}Ca{sub 0.25}La{sub 0.25}Mn{sub 0.5}Ru{sub 0.5}O{sub 3} were also investigated to study the effects of changing the charge of the A-site cation. Although substitution of La{sup 3+} for a divalent alkaline earth ion increases the Mn{sup 3+} content, this series of compounds also shows a relative increase in the concentration of Mn{sup 4+} as the average size of the A-site cation is decreased. In all compounds the octahedra containing Mn{sup 3+} are found to be Jahn-Teller distorted regardless of whether or not long-range orbital ordering is observed, while the Ru-centered octahedra are symmetric. No evidence for short-range cation ordering at either the A- or B-sites was found for any of the compositions. This study also reports that locally the A-site cations lie closer to the Mn ions than to the Ru ions and this asymmetry appears to be correlated to the degree of octahedral tilting.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Relationships among climatological vertical moisture structure, column water vapor, and precipitation over the central Amazon in observations and CMIP5 models

Bias and spread in Coupled Model Intercomparison Project Phase 5 simulated vertical specific humidity (q) structure are examined and related to both precipitation and column water vapor (cwv) near Manaus, Brazil, site of the recent Green Ocean Amazon campaign. Simulated seasonal mean q profiles are typically too dry, especially at low levels and during the local dry season, consistent with previously identified surface hydroclimate biases in the Amazon. Multimodel empirical orthogonal function analysis of the models' monthly climatological q profiles indicates two significant modes of ensemble spread in moisture vertical structure, with the leading mode peaked at low levels and the second mode in the lower free troposphere (LFT). While both modes project onto simulated cwv spread, only the first projects on precipitation, suggesting inconsistent sensitivity of simulated rainfall to LFT moisture. Finally, relative to observations, models with high cwv and low-level moisture errors tend to exhibit high precipitation error.

54 ENVIRONMENTAL SCIENCES↗

Tetrahedral Tilting and Lithium‐Ion Transport in Halide Argyrodites Prepared by Rapid, Microwave‐Assisted Synthesis

Abstract This study demonstrates a rapid, dry, microwave‐assisted (MW) synthesis method that enables preparation of halide argyrodites ( , , ) in less than 20 min. The structures and ion transport properties of the resulting materials are compared with those synthesized by conventional solid‐state synthesis methods. The microwave‐assisted method leads to increased site disorder and elevated Arrhenius prefactors (), which lead to an order of magnitude improvement in the 30 ionic conductivity of MW‐. X‐ray pair distribution function analysis (XPDF) reveals significant rotational disorder of the units, which is impacted by the synthesis method, choice of halide, and presence of / site disorder. These rotational displacements are strongly correlated with ion transport, specifically and entropy of migration (). Overall, this study demonstrates a rapid synthesis route for preparing high‐quality halide argyrodite solid‐state electrolytes in less than 20 min, and further unravels atomistic insights into the interplay of structural disorder, rotational dynamics, and ion transport mechanisms.

36 MATERIALS SCIENCE↗

Hydration and Thermal Expansion in Anatase Nanoparticles

A tunable thermal expansion is reported in nanosized anatase by taking advantage of surface hydration. The coefficient of thermal expansion of 4 nm TiO2 along a-axis is negative with a hydrated surface and is positive without a hydrated surface. High-energy synchrotron X-ray pair distribution function analysis combined with ab initio calculations on the specific hydrated surface are carried out to reveal the local structure distortion that is responsible for the unusual negative thermal expansion.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Direct Synthesis of Ammonia from Nitrate on Amorphous Graphene with Near 100% Efficiency

Abstract Ammonia is an indispensable commodity in the agricultural and pharmaceutical industries. Direct nitrate‐to‐ammonia electroreduction is a decentralized route yet challenged by competing side reactions. Most catalysts are metal‐based, and metal‐free catalysts with high nitrate‐to‐ammonia conversion activity are rarely reported. Herein, it is shown that amorphous graphene synthesized by laser induction and comprising strained and disordered pentagons, hexagons, and heptagons can electrocatalyze the eight‐electron reduction of NO 3 − to NH 3 with a Faradaic efficiency of ≈100% and an ammonia production rate of 2859 µg cm −2 h −1 at −0.93 V versus reversible hydrogen electrode. X‐ray pair‐distribution function analysis and electron microscopy reveal the unique molecular features of amorphous graphene that facilitate NO 3 − reduction. In situ Fourier transform infrared spectroscopy and theoretical calculations establish the critical role of these features in stabilizing the reaction intermediates via structural relaxation. The enhanced catalytic activity enables the implementation of flow electrolysis for the on‐demand synthesis and release of ammonia with >70% selectivity, resulting in significantly increased yields and survival rates when applied to plant cultivation. The results of this study show significant promise for remediating nitrate‐polluted water and completing the NO x cycle.

Huang, Libei↗

Vanadyl Phosphates A x VOPO 4 (A = Li, Na, K) as Multielectron Cathodes for Alkali-Ion Batteries

Vanadyl phosphates comprise a class of multielectron cathode materials capable of cycling two Li + , about 1.66 Na + , and some K + ions per redox center. In this review, structures, thermodynamic stabilities, and ion diffusion kinetics of various A x VOPO 4 (A = Li, Na, K, NH 4 ) polymorphs are discussed. Both the experimental data and first-principle calculations indicate kinetic limitations for alkali metal ions cycling, especially between for 0 ≤ x ≤ 1, and metastability of phases with x > 1. This creates challenges for multiple-ion cycling, as the slow kinetics call for nanosized particles, which being metastable and reactive with organic electrolytes are prone to side reactions. Thus, various synthesis approaches, surface coating, and transition metal ion substitution strategies are discussed here as possible ways to stabilize A x VOPO 4 structures and improve alkali metal ion diffusion. Finally, the role of advanced characterization techniques, such as X-ray absorption spectroscopy, diffraction, pair distribution function analysis and 7 Li and 31 P NMR, in understanding the reaction mechanism from both structural and electronic points of view is emphasized.

25 ENERGY STORAGE↗

High Thermoelectric Performance through Crystal Symmetry Enhancement in Triply Doped Diamondoid Compound Cu 2 SnSe 3

The presence of high crystallographic symmetry and nanoscale defects are favorable for thermoelectrics. With proper electronic structures, a highly symmetric crystal tends to possess multiple carrier channels and promote electrical conductivity without sacrificing Seebeck coefficient. In addition, nanoscale defects can effectively scatter acoustic phonons to suppress thermal conductivity. Here, we report that the triple doping of Cu 2 SnSe 3 leads to a high ZT value of 1.6 at 823 K for Cu 1.85 Ag 0.15 (Sn 0.88 Ga 0.1 Na 0.02 )Se 3 , and a decent average ZT (ZT ave ) value of 0.7 is also achieved for Cu 1.85 Ag 0.15 (Sn 0.93 Mg 0.06 Na 0.01 )Se 3 from 475 to 823 K. Our study reveals: (1) Ag doping on Cu sites generates numerous point defects and greatly decreases lattice thermal conductivity. (2) Doping Mg or Ga converts the monoclinic Cu 2 SnSe 3 into a cubic structure. This symmetry enhancing leads to increase in the effective mass from 0.8 m e to 2.6 m e (m e , free electron mass) and the power factor from 4.3 μW/cm –1 K –2 for Cu 2 SnSe 3 to 11.6 μW/cm –1 K –2 . (3) Na doping creates dense dislocation arrays and nanoprecipitates, which strengthens the phonon scattering. (4) Pair distribution function analysis shows localized symmetry breakdwon in the cubic Cu 1.85 Ag 0.15 (Sn 0.88 Ga 0.1 Na 0.02 )Se 3 . Furthermore, the present work provides a standpoint to design promising thermoelectric materials by synergistically manipulating crystal symmetry and nanoscale defects.

36 MATERIALS SCIENCE↗