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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 739 records · Page 41

Theory of activated glassy relaxation, mobility gradients, surface diffusion, and vitrification in free standing thin films

We have constructed a quantitative, force level, statistical mechanical theory for how confinement in free standing thin films introduces a spatial mobility gradient of the alpha relaxation time as a function of temperature, film thickness, and location in the film. The crucial idea is that relaxation speeds up due to the reduction of both near-surface barriers associated with the loss of neighbors in the local cage and the spatial cutoff and dynamical softening near the vapor interface of the spatially longer range collective elasticity cost for large amplitude hopping. These two effects are fundamentally coupled. Quantitative predictions are made for how an apparent glass temperature depends on the film thickness and experimental probe technique, the emergence of a two-step decay and mobile layers in time domain measurements, signatures of confinement in frequency-domain dielectric loss experiments, the dependence of film-averaged relaxation times and dynamic fragility on temperature and film thickness, surface diffusion, and the relationship between kinetic experiments and pseudo-thermodynamic measurements such as ellipsometry.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

High temperature and pressure regime soot: Physical, optical and chemical signatures from high explosive detonations

Submicron particles are formed during the detonation and deflagration of carbon-rich energetic materials known as high explosives (HE) that can be lofted and transported long distances in the atmosphere. Particles include refractory species like soot, a.k.a. black carbon (BC), and have impacts to climate and human health at local, regional, and global scales. Here, we contrast detonation soot aerosol physical, optical and chemical properties that are formed more efficiently in terms of emission factors and ratios with traditional combustion sources from biomass burning and fossil fuels. We utilize ambient aerosol techniques for the first time to identify soot from two well-known HE's (1) Comp B-3: 40% trinitrotoluene (TNT) and 60% 1,3,5-trinitro-1,3,5-triazinane (RDX) and (2) PBX 9501: 95% 1,3,5,7-tetranitro-1,3,5,7-tetrazoctane (HMX) with 2.5% Estane and a 2.5% mixture of bis(2,2-dinitropropyl)-acetal (BDNPA) and bis(2,2-dinitropropyl)-formal (BDNPF). Size distributions, optical and chemical properties are presented. Aggregate soot had small mobility diameters (<100 nm) and unique optical and chemical signatures depending on the explosive composite composition, detonation atmosphere (e.g., air, argon) and pressure. Single-scattering albedos (SSA) from 0.3 to 0.8 and absorption Angstrom exponents (AAE) from 0.5 to 2.0 measured across 405–870 nm wavelengths depended on the explosive composite composition and detonation conditions. Comp B-3 detonation soot was similar to other combustion soot sources, whereas PBX 9501 soot had high scattering relative to absorption. Carbonaceous chemical signatures included the presence of fullerenes that were distinct from ambient and laboratory-generated soot surrogates and the detection of trace metals, including aluminum, copper, iron, and zinc.

36 MATERIALS SCIENCE↗

Spin-liquid ground state in the frustrated J 1 - J 2 zigzag chain system BaTb 2 O 4

We have investigated polycrystalline samples of the zigzag chain system BaTb 2 O 4 with magnetic susceptibility, heat capacity, neutron powder diffraction, and muon spin relaxation measurements. No magnetic transitions are observed in the bulk measurements, while neutron diffraction reveals low-temperature, short-range, intrachain magnetic correlations between Tb 3+ ions. Muon spin relaxation measurements indicate that these correlations are dynamic, as the technique detects no signatures of static magnetism down to 0.095 K. Altogether these findings provide strong evidence for a spin liquid ground state in BaTb 2 O 4 .

36 MATERIALS SCIENCE↗

The senescent methylome and its relationship with cancer, ageing and germline genetic variation in humans

Background: Cellular senescence is a stable arrest of proliferation and is considered a key component of processes associated with carcinogenesis and other ageing-related phenotypes. Here, we perform methylome analysis of actively dividing and deeply senescent normal human epithelial cells. Results: We identify senescence-associated differentially methylated positions (senDMPs) from multiple experiments using cells from one donor. We find that human senDMP epigenetic signatures are positively and significantly correlated with both cancer and ageing-associated methylation dynamics. We also identify germline genetic variants, including those associated with the p16INK4A locus, which are associated with the presence of in vivo senDMP signatures. Importantly, we also demonstrate that a single senDMP signature can be effectively reversed in a newly-developed protocol of transient senescence reversal. Conclusions: The senDMP signature has significant potential for understanding some of the key (epi)genetic etiological factors that may lead to cancer and age-related diseases in humans.

59 BASIC BIOLOGICAL SCIENCES↗

FTICR-MS data

Soils along a salinity gradient from a coastal forested floodplain (Beaver Creek in Western Washington) were analyzed for their organic compound signatures using Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FTICR). This contains 12T FTICR reports of water and chloroform fraction of soils, processed data using FREDA, data filtering steps in FREDA, data used to generate van Krevelen plots, and code for analyzing FTICR data and performing statistics.

54 ENVIRONMENTAL SCIENCES↗

A Significant Increase in Detection of High-resolution Emission Spectra Using a Three-dimensional Atmospheric Model of a Hot Jupiter

High-resolution spectroscopy has opened the way for new, detailed study of exoplanet atmospheres. There is evidence that this technique can be sensitive to the complex, three-dimensional (3D) atmospheric structure of these planets. In this work, we perform cross-correlation analysis of high-resolution (R ∼ 100,000) CRIRES/VLT emission spectra of the hot Jupiter HD 209458b. We generate template emission spectra from a 3D atmospheric circulation model of the planet, accounting for temperature structure and atmospheric motions—winds and planetary rotation—missed by spectra calculated from one-dimensional models. In this first-of-its-kind analysis, we find that using template spectra generated from a 3D model produces a more significant detection (6.9σ) of the planet’s signal than any of the hundreds of one-dimensional models we tested (maximum of 5.1σ). We recover the planet’s thermal emission, its orbital motion, and the presence of CO in its atmosphere at high significance. Additionally, we analyzed the relative influences of 3D temperature and chemical structures in this improved detection, including the contributions from CO and H{sub 2}O, as well as the role of atmospheric Doppler signatures from winds and rotation. This work shows that the hot Jupiter’s 3D atmospheric structure has a first-order influence on its emission spectra at high resolution and motivates the use of multidimensional atmospheric models in high-resolution spectral analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

A comparison of lodgepole and spruce needle chemistry impacts on terrestrial biogeochemical processes during isolated decomposition

This study investigates the isolated decomposition of spruce and lodgepole conifer needles to enhance our understanding of how needle litter impacts near-surface terrestrial biogeochemical processes. Harvested needles were exported to a subalpine meadow to enable a discrete analysis of the decomposition processes over 2 years. Initial chemistry revealed the lodgepole needles to be less recalcitrant with a lower carbon to nitrogen (C:N) ratio. Total C and N fundamentally shifted within needle species over time with decreased C:N ratios for spruce and increased ratios for lodgepole. Differences in chemistry correlated with CO 2 production and soil microbial communities. The most pronounced trends were associated with lodgepole needles in comparison to the spruce and needle-free controls. Increased organic carbon and nitrogen concentrations associated with needle presence in soil extractions further corroborate the results with clear biogeochemical signatures in association with needle chemistry. Interestingly, no clear differentiation was observed as a function of bark beetle impacted spruce needles vs those derived from healthy spruce trees despite initial differences in needle chemistry. These results reveal that the inherent chemistry associated with tree species has a greater impact on soil biogeochemical signatures during isolated needle decomposition. By extension, biogeochemical shifts associated with bark beetle infestation are likely driven more by changes such as the cessation of rhizospheric processes than by needle litter decomposition.

Bark Beetle Disturbance↗

New Experiments for Detecting Emissions from Fission

Ensuring that nuclear science and technology is used solely for peaceful purposes is one of the most pressing challenges facing our society. The Consortium for Monitoring, Technology, and Verification (MTV) mission is to help meet this challenge by providing advanced technology and trained talent for careers in nuclear security and nonproliferation. The study of nuclear fission is one area of interest in the MTV. We are performing new experiments for the characterization of neutron and gamma ray emissions from fission fragments. These emissions are signatures for the detection and characterization of nuclear materials. To perform these experiments, we have developed Fission Sphere (FS-3), an array of forty organic stilbene detectors operated in time-coincidence. The FS-3 is used to measure the prompt emissions of neutrons and gamma rays from Cf-252 spontaneous fission. These new data will be used to validate physics-based prediction codes, including CGMF and FREYA, and will be useful in future ENDF and ENSDF evaluations. This paper will present results from the first experiments using FS-3 and a Cf-252 spontaneous fission source. It will compare the experimental results with predictions from theory and Monte Carlo simulation. Specifically, we will describe the correlations among energy, multiplicity, and angles of emitted particles. We will also discuss the application of these correlations in multiplicity counting techniques, which are widely used in nuclear safeguards.

Pozzi, S. A.↗

Science Enabled by the Ares V: A Large Monolithic Telescope Placed at the Second Sun-Earth Lagrange Point

The payload mass and volume capabilities of the planned Ares V launch vehicle provide the science community with unprecedented opportunities to place large science payloads into low earth orbit and beyond. One example, the outcome of a recent study conducted at the NASA Marshall Space Flight Center, is a large, monolithic telescope with a primary mirror diameter of 6.2 meters placed into a halo orbit about the second Sun-Earth Lagrange point, or L2, approximately 1.5 million kin beyond Earth's orbit. Operating in the visible and ultraviolet regions of the electromagnetic spectrum, such a large telescope would allow astronomers to detect bio-signatures and characterize the atmospheres of transiting exoplanets, provide high resolution imaging three or more times better than the Hubble Space Telescope and the James Webb Space Telescope, and observe the ultraviolet light from warm baryonic matter.

Hopkins, Randall C.↗

Neurosensory and Sinus Evolution as Tyrannosauroid Dinosaurs Developed Giant Size: Insight from the Endocranial Anatomy of Bistahieversor sealeyi

Tyrannosaurus rex and other tyrannosaurid dinosaurs were apex predators during the latest Cretaceous, which combined giant size and advanced neurosensory systems. Computed tomography (CT) data have shown that tyrannosaurids had a trademark system of a large brain, large olfactory bulbs, elongate cochlear ducts, and expansive endocranial sinuses surrounding the brain and sense organs. Older, smaller tyrannosauroid relatives of tyrannosaurids developed some, but not all, of these features, raising the hypothesis that tyrannosaurid-style brains evolved before the enlarged tyrannosaurid-style sinuses, which might have developed only with large body size. This has been difficult to test, however, because little is known about the brains and sinuses of the first large-bodied tyrannosauroids, which evolved prior to Tyrannosauridae. Here we present the first CT data for one of these species, Bistahieversor sealeyi from New Mexico. Bistahieversor had a nearly identical brain and sinus system as tyrannosaurids like Tyrannosaurus, including a large brain, large olfactory bulbs, reduced cerebral hemispheres, and optic lobes, a small tab-like flocculus, long and straight cochlear ducts, and voluminous sinuses that include a supraocciptal recess, subcondyar sinus, and an anterior tympanic recess that exits the braincase via a prootic fossa. When characters are plotted onto tyrannosauroid phylogeny, there is a two-stage sequence in which features of the tyrannosaurid-style brain evolved first (in smaller, nontyrannosaurid species like Timurlengia), followed by features of the tyrannosaurid-style sinuses (in the first large-bodied nontyrannosaurid tyrannosauroids like Bistahieversor). This suggests that the signature tyrannosaurid sinus system evolved in concert with large size, whereas the brain did not.

59 BASIC BIOLOGICAL SCIENCES↗

Shining a spotlight on intact proteins

Cells react to cues from their environment using various mechanisms that include changes in metabolites, gene expression, protein binding partners, protein localization, and protein posttranslational modifications (PTMs), all of which contribute to altered cellular signatures that enable appropriate cellular responses. Given the seemingly infinite number of mechanisms available to affect protein function and modulate biological processes, the question arises as to how cells manage to interpret protein readouts to accomplish the appropriate cell-type specific response to a particular stimulus.

Environmental Molecular Sciences Laboratory↗

Plutonium Isotopes in the Terrestrial Environment at the Savannah River Site, USA. A Long-Term Study

This work presents the findings of a long term plutonium study at Savannah River Site (SRS) conducted between 2003 and 2013. Terrestrial environmental samples were obtained at Savannah River National Laboratory (SRNL) in A-area. Plutonium content and isotopic abundances were measured over this time period by alpha spectrometry and three stage thermal ionization mass spectrometry (3STIMS). Here we detail the complete sample collection, radiochemical separation, and measurement procedure specifically targeted to trace plutonium in bulk environmental samples. Total plutonium activities were determined to be not significantly above atmospheric global fallout. However, the 238 Pu/ 239+240 Pu activity ratios attributed to SRS are above atmospheric global fallout ranges. The 240 Pu/ 239 Pu atom ratios are reasonably consistent from year to year and are lower than fallout, while the 242 Pu/ 239 Pu atom ratios are higher than fallout values. Overall, the plutonium signatures obtained in this study reflect a mixture of weapons-grade, higher burn-up, and fallout material. This study provides a blue print for long term low level monitoring of plutonium in the environment.

54 ENVIRONMENTAL SCIENCES↗

Observation of electron orbital signatures of single atoms within metal-phthalocyanines using atomic force microscopy

Resolving the electronic structure of a single atom within a molecule is of fundamental importance for understanding and predicting chemical and physical properties of functional molecules such as molecular catalysts. However, the observation of the orbital signature of an individual atom is challenging. We report here the direct identification of two adjacent transition-metal atoms, Fe and Co, within phthalocyanine molecules using high-resolution noncontact atomic force microscopy (HR-AFM). HR-AFM imaging reveals that the Co atom is brighter and presents four distinct lobes on the horizontal plane whereas the Fe atom displays a “square” morphology. Pico-force spectroscopy measurements show a larger repulsion force of about 5 pN on the tip exerted by Co in comparison to Fe. Our combined experimental and theoretical results demonstrate that both the distinguishable features in AFM images and the variation in the measured forces arise from Co’s higher electron orbital occupation above the molecular plane. The ability to directly observe orbital signatures using HR-AFM should provide a promising approach to characterizing the electronic structure of an individual atom in a molecular species and to understand mechanisms of certain chemical reactions.

36 MATERIALS SCIENCE↗

Interlayer exciton landscape in WS 2 /tetracene heterostructures

The vertical stacking of two-dimensional materials into heterostructures gives rise to a plethora of intriguing optoelectronic properties and presents an unprecedented potential for technological development. While much progress has been made combining different monolayers of transition metal dichalcogenides (TMDs), little is known about TMD-based heterostructures including organic layers of molecules. In this work, we present a joint theory–experiment study on a TMD/tetracene heterostructure demonstrating clear signatures of spatially separated interlayer excitons in low temperature photoluminescence spectra. Here, the Coulomb-bound electrons and holes are localized either in the TMD or in the molecule layer, respectively. We reveal both in theory and experiment signatures of the entire intra- and interlayer exciton landscape in the photoluminescence spectra. In particular, we find both in theory and experiment a pronounced transfer of intensity from the intralayer TMD exciton to a series of energetically lower interlayer excitons with decreasing temperature. In addition, we find signatures of phonon-sidebands stemming from these interlayer exciton states. Our findings shed light on the microscopic nature of interlayer excitons in TMD/molecule heterostructures and could have important implications for technological applications of these materials.

36 MATERIALS SCIENCE↗

Single-molecule diffusometry reveals no catalysis-induced diffusion enhancement of alkaline phosphatase as proposed by FCS experiments

Significance Recent experiments have suggested that the energy released by a chemical reaction can propel its enzyme catalyst (for example, alkaline phosphatase). However, this topic remains controversial, partially due to the indirect and ensemble nature of existing measurements. Here, we used recently developed single-molecule approaches to monitor directly the motions of individual proteins in aqueous solution and find that single alkaline phosphatase enzymes do not diffuse faster under catalysis. Instead, we demonstrate that interactions between the fluorescent dye and the enzyme’s substrate can produce the signature of apparent diffusion enhancement in fluorescence correlation spectroscopy, the standard ensemble assay currently used to study enzyme diffusion and indicate that single-molecule approaches provide a more robust means to investigate diffusion at the nanoscale.

36 MATERIALS SCIENCE↗

Progress Toward a Multiomic Understanding of Traumatic Brain Injury: A Review

Traumatic brain injury (TBI) is not a single disease state but describes an array of conditions associated with insult or injury to the brain. While some individuals with TBI recover within a few days or months, others present with persistent symptoms that can cause disability, neuropsychological trauma, and even death. Understanding, diagnosing, and treating TBI is extremely complex for many reasons, including the variable biomechanics of head impact, differences in severity and location of injury, and individual patient characteristics. Because of these confounding factors, the development of reliable diagnostics and targeted treatments for brain injury remains elusive. We argue that the development of effective diagnostic and therapeutic strategies for TBI requires a deep understanding of human neurophysiology at the molecular level and that the framework of multiomics may provide some effective solutions for the diagnosis and treatment of this challenging condition. To this end, we present here a comprehensive review of TBI biomarker candidates from across the multiomic disciplines and compare them with known signatures associated with other neuropsychological conditions, including Alzheimer’s disease and Parkinson’s disease. We believe that this integrated view will facilitate a deeper understanding of the pathophysiology of TBI and its potential links to other neurological diseases.

60 APPLIED LIFE SCIENCES↗

Induction of kidney-related gene programs through co-option of SALL1 in mole ovotestes

Changes in gene expression represent an important source of phenotypic innovation. Yet how such changes emerge and impact the evolution of traits remains elusive. Here, we explore the molecular mechanisms associated with the development of masculinizing ovotestes in female moles. By performing integrative analyses of epigenetic and transcriptional data in mole and mouse, we identified the co-option of SALL1 expression in mole ovotestes formation. Chromosome conformation capture analyses highlight a striking conservation of the 3D organization at the SALL1 locus, but an evolutionary divergence of enhancer activity. Interspecies reporter assays support the capability of mole-specific enhancers to activate transcription in urogenital tissues. Through overexpression experiments in transgenic mice, we further demonstrate the capability of SALL1 to induce kidney-related gene programs, which are a signature of mole ovotestes. Our results highlight the co-option of gene expression, through changes in enhancer activity, as a plausible mechanism for the evolution of traits.

59 BASIC BIOLOGICAL SCIENCES↗

Towards scalable dataframe systems

Dataframes are a popular abstraction to represent, prepare, and analyze data. Despite the remarkable success of dataframe libraries in R and Python, dataframes face performance issues even on moderately large datasets. Moreover, there is significant ambiguity regarding dataframe semantics. In this paper we lay out a vision and roadmap for scalable dataframe systems. To demonstrate the potential in this area, we report on our experience building Modin, a scaled-up implementation of the most widely-used and complex dataframe API today, Python's pandas. With pandas as a reference, we propose a simple data model and algebra for dataframes to ground discussion in the field. Given this foundation, we lay out an agenda of open research opportunities where the distinct features of dataframes will require extending the state of the art in many dimensions of data management. We discuss the implications of signature dataframe features including flexible schemas, ordering, row/column equivalence, and data/metadata fluidity, as well as the piecemeal, trial-and-error-based approach to interacting with dataframes.

97 MATHEMATICS AND COMPUTING↗