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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 757 records · Page 42
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Synchrotron X-Ray Microdiffraction Investigation of Scaling Effects on Reliability for Through-Silicon Vias for 3-D Integration

Synchrotron x-ray microdiffraction has been applied to TSV characterization in various studies for nondestructive inspection with submicron resolution due to its high beam intensity and penetration depth. Here, the application of this technique to TSV investigations is examined and the correlation of the plastic deformation to the microstructure and extrusion behavior along with the effect of TSV dimensional scaling is examined. It is shown that the variability of the copper microstructure and resulting TSV behavior requires a larger number of samples in order to report statistically significant observations. The role of the microstructure in creating statistical scatter is demonstrated through microdiffraction measurements of grain orientation correlated with the observed peak widening, which shows that degraded TSV reliability is largely due to the high elastic anisotropy of copper. After taking the statistical variations into account, the scaling effect was clearly observed, with larger plastic deformation in 2μm diameter TSVs than in 5μm diameter TSVs consistent with microstructure variations. This is confirmed by TSV extrusion measurements, which show that the magnitude and statistical spread of the via extrusion for the 2μm diameter TSVs is higher than that of the 5μm diameter TSVs. These findings, confirmed by thermomechanical simulation, demonstrate first that large sample sizes are required in copper TSV investigations due to high variability, which is not improved with scaling.

36 MATERIALS SCIENCE↗
DOE OSTI2018

A Ricin Forensic Profiling Approach Based on a Complex Set of Biomarkers

A forensic method for the retrospective determination of preparation methods used for illicit ricin toxin production was developed. The method was based on a complex set of biomarkers, including carbohydrates, fatty acids, seed storage proteins, in combination with data on ricin and Ricinus communis agglutinin. The analyses were performed on samples prepared from four castor bean plant ( Ricinus communis ) cultivars by four different sample preparation methods (PM1 – PM4) ranging from simple disintegration of the castor beans to multi-step preparation methods including different protein precipitation methods. Comprehensive analytical data was collected by use of a range of analytical methods and robust orthogonal partial least squares-discriminant analysis- models (OPLS-DA) were constructed based on the calibration set. By the use of a decision tree and two OPLS-DA models, the sample preparation methods of a test set of ricin preparations were determined. The model statistics of the two models were good and a 100% rate of correct predictions of the test set was achieved.

Fredriksson, Sten-Åke (ORCID:0000000237131990)↗
DOE OSTI2015

Defining window-boundaries for genomic analyses using smoothing spline techniques

High-density genomic data is often analyzed by combining information over windows of adjacent markers. Interpretation of data grouped in windows versus at individual locations may increase statistical power, simplify computation, reduce sampling noise, and reduce the total number of tests performed. However, use of adjacent marker information can result in over- or under-smoothing, undesirable window boundary specifications, or highly correlated test statistics. We introduce a method for defining windows based on statistically guided breakpoints in the data, as a foundation for the analysis of multiple adjacent data points. This method involves first fitting a cubic smoothing spline to the data and then identifying the inflection points of the fitted spline, which serve as the boundaries of adjacent windows. This technique does not require prior knowledge of linkage disequilibrium, and therefore can be applied to data collected from individual or pooled sequencing experiments. Moreover, in contrast to existing methods, an arbitrary choice of window size is not necessary, since these are determined empirically and allowed to vary along the genome.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1991

A new method for simulating atmospheric turbulence for rotorcraft applications

Simulation of atmospheric turbulence as seen by a rotating blade element involves treatment of cyclostationary processes. Conventional filtering techniques do not lend themselves well to the generation of such turbulence sample functions as are required in rotorcraft flight dynamics simulation codes. A method to generate sample functions containing second order statistics of mean and covariance is presented. Compared to ensemble averaging involving excessive computer time, the novelty is to exploit cycloergodicity and thereby, replace ensemble averaging by averaging over a single path sample function of long duration. The method is validated by comparing its covariance results with the analytical and ensemble averaged results for a widely used 1-D turbulence approximation.

J. Riaz↗
NASA NTRS2011

Multi-Sensor Aerosol Products Sampling System

Global and local properties of atmospheric aerosols have been extensively observed and measured using both spaceborne and ground-based instruments, especially during the last decade. Unique properties retrieved by the different instruments contribute to an unprecedented availability of the most complete set of complimentary aerosol measurements ever acquired. However, some of these measurements remain underutilized, largely due to the complexities involved in analyzing them synergistically. To characterize the inconsistencies and bridge the gap that exists between the sensors, we have established a Multi-sensor Aerosol Products Sampling System (MAPSS), which consistently samples and generates the spatial statistics (mean, standard deviation, direction and rate of spatial variation, and spatial correlation coefficient) of aerosol products from multiple spacebome sensors, including MODIS (on Terra and Aqua), MISR, OMI, POLDER, CALIOP, and SeaWiFS. Samples of satellite aerosol products are extracted over Aerosol Robotic Network (AERONET) locations as well as over other locations of interest such as those with available ground-based aerosol observations. In this way, MAPSS enables a direct cross-characterization and data integration between Level-2 aerosol observations from multiple sensors. In addition, the available well-characterized co-located ground-based data provides the basis for the integrated validation of these products. This paper explains the sampling methodology and concepts used in MAPSS, and demonstrates specific examples of using MAPSS for an integrated analysis of multiple aerosol products.

Petrenko, M.↗
DOE OSTI2015

Statistical scaling of geometric characteristics in stochastically generated pore microstructures

In this study, we analyze the statistical scaling of structural attributes of virtual porous microstructures that are stochastically generated by thresholding Gaussian random fields. Characterization of the extent at which randomly generated pore spaces can be considered as representative of a particular rock sample depends on the metrics employed to compare the virtual sample against its physical counterpart. Typically, comparisons against features and/patterns of geometric observables, e.g., porosity and specific surface area, flow-related macroscopic parameters, e.g., permeability, or autocorrelation functions are used to assess the representativeness of a virtual sample, and thereby the quality of the generation method. Here, we rely on manifestations of statistical scaling of geometric observables which were recently observed in real millimeter scale rock samples [13] as additional relevant metrics by which to characterize a virtual sample. We explore the statistical scaling of two geometric observables, namely porosity (Φ) and specific surface area (SSA), of porous microstructures generated using the method of Smolarkiewicz and Winter [42] and Hyman and Winter [22]. Our results suggest that the method can produce virtual pore space samples displaying the symptoms of statistical scaling observed in real rock samples. Order q sample structure functions (statistical moments of absolute increments) of Φ and SSA scale as a power of the separation distance (lag) over a range of lags, and extended self-similarity (linear relationship between log structure functions of successive orders) appears to be an intrinsic property of the generated media. The width of the range of lags where power-law scaling is observed and the Hurst coefficient associated with the variables we consider can be controlled by the generation parameters of the method.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Priors on red galaxy stochasticity from hybrid effective field theory

ABSTRACT We investigate the stochastic properties of typical red galaxy samples in a controlled numerical environment. We use halo occupation distribution (HOD) modelling to create mock realizations of three separate bright red galaxy samples consistent with data sets used for clustering and lensing analyses in modern galaxy surveys. Second-order Hybrid Effective Field Theory (HEFT) is used as a field-level forward model to describe the full statistical distribution of these tracer samples, and their stochastic power spectra are directly measured and compared to the Poisson shot-noise prediction. While all of the galaxy samples we consider are hosted within haloes with sub-Poisson stochasticity, we observe that the galaxy samples themselves possess stochasticities that range from sub-Poisson to super-Poisson, in agreement with predictions from the halo model. As an application of our methodology, we place priors on the expected degree of non-Poisson stochasticity in cosmological analyses using such samples. We expect these priors will be useful in reducing the complexity of the full parameter space for future analyses using second-order Lagrangian bias models. More generally, the techniques outlined here present the first application of HEFT methods to characterize models of the galaxy–halo connection at the field level, revealing new connections between once-disparate modelling frameworks.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2016

THE SWIFT AGN AND CLUSTER SURVEY. II. CLUSTER CONFIRMATION WITH SDSS DATA

We study 203 (of 442) Swift AGN and Cluster Survey extended X-ray sources located in the SDSS DR8 footprint to search for galaxy over-densities in three-dimensional space using SDSS galaxy photometric redshifts and positions near the Swift cluster candidates. We find 104 Swift clusters with a >3σ galaxy over-density. The remaining targets are potentially located at higher redshifts and require deeper optical follow-up observations for confirmation as galaxy clusters. We present a series of cluster properties including the redshift, brightest cluster galaxy (BCG) magnitude, BCG-to-X-ray center offset, optical richness, and X-ray luminosity. We also detect red sequences in ∼85% of the 104 confirmed clusters. The X-ray luminosity and optical richness for the SDSS confirmed Swift clusters are correlated and follow previously established relations. The distribution of the separations between the X-ray centroids and the most likely BCG is also consistent with expectation. We compare the observed redshift distribution of the sample with a theoretical model, and find that our sample is complete for z ≲ 0.3 and is still 80% complete up to z ≃ 0.4, consistent with the SDSS survey depth. These analysis results suggest that our Swift cluster selection algorithm has yielded a statistically well-defined cluster sample for further study of cluster evolution and cosmology. We also match our SDSS confirmed Swift clusters to existing cluster catalogs, and find 42, 23, and 1 matches in optical, X-ray, and Sunyaev–Zel’dovich catalogs, respectively, and so the majority of these clusters are new detections.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2018

Linking Associations of Rare Low-Abundance Species to Their Environments by Association Networks

Studies of microbial communities by targeted sequencing of rRNA genes lead to recovering numerous rare low-abundance taxa with unknown biological roles. We propose to study associations of such rare organisms with their environments by a computational framework based on transformation of the data into qualitative variables. Namely, we analyze the sparse table of putative species or OTUs (operational taxonomic units) and samples generated in such studies, also known as an OTU table, by collecting statistics on co-occurrences of the species and on shared species richness across samples. Based on the statistics we built two association networks, of the rare putative species and of the samples respectively, using a known computational technique, Association networks (Anets) developed for analysis of qualitative data. Clusters of samples and clusters of OTUs are then integrated and combined with metadata of the study to produce a map of associated putative species in their environments. We tested and validated the framework on two types of microbiomes, of human body sites and that of the Populus tree root systems. We show that in both studies the associations of OTUs can separate samples according to environmental or physiological characteristics of the studied systems.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1989

Chi-squared and C statistic minimization for low count per bin data

Results are presented from a computer simulation comparing two statistical fitting techniques on data samples with large and small counts per bin; the results are then related specifically to X-ray astronomy. The Marquardt and Powell minimization techniques are compared by using both to minimize the chi-squared statistic. In addition, Cash's C statistic is applied, with Powell's method, and it is shown that the C statistic produces better fits in the low-count regime than chi-squared.

Nousek, John A.↗
DOE OSTI2020

CCCP and MENeaCS: (updated) weak-lensing masses for 100 galaxy clusters

ABSTRACT Large area surveys continue to increase the samples of galaxy clusters that can be used to constrain cosmological parameters, provided that the masses of the clusters are measured robustly. To improve the calibration of cluster masses using weak gravitational lensing we present new results for 48 clusters at 0.05 < z < 0.15, observed as part of the Multi Epoch Nearby Cluster Survey, and re-evaluate the mass estimates for 52 clusters from the Canadian Cluster Comparison Project. Updated high-fidelity photometric redshift catalogues of reference deep fields are used in combination with advances in shape measurements and state-of-the-art cluster simulations, yielding an average systematic uncertainty in the lensing signal below 5 per cent, similar to the statistical uncertainty for our cluster sample. We derive a scaling relation with Planck measurements for the full sample and find a bias in the Planck masses of 1 − b = 0.84 ± 0.04 (stat) ±0.05 (syst). We find no statistically significant trend of the mass bias with redshift or cluster mass, but find that different selections could change the bias by up to 0.07. We find a gas fraction of 0.139 ± 0.014 (stat) for eight relaxed clusters in our sample, which can also be used to infer cosmological parameters.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRSDate not supplied

Impact Real World System Validation

Introduction NASA has developed a new evidence-based data-driven probabilistic risk assessment and tradespace analysis tool as a successor to the Integrated Medical Model. This updated decision support tool is known as IMPACT (Informing Mission Planning via Analysis of Complex Tradespaces). IMPACT estimates the frequency and consequences of medical conditions that might arise during exploration missions. A validation analysis of IMPACT was performed with respect to a set of International Space Station (ISS) and Shuttle Transportation System (STS) real world system (RWS) referent data due to the limited referent data available from exploration missions. Methods Observed mission and crew characteristics from STS and ISS missions were used as model inputs within MEDPRAT (Medical Extensible Dynamic Probabilistic Risk Assessment Tool). For each mission, two hundred thousand simulations were generated. For each mission, model outputs included occurrence counts for each condition, total medical events (TME), and the probability of loss of crew life (LOCL). These simulated model outputs were compared to the RWS referent data. Results The predicted number of total medical events exceeded the total RWS medical events for ISS missions and combined ISS and STS missions and fell within the 90% confidence interval for STS missions. For the 32 ISS missions simulated by IMPACT, the number of total medical events was overpredicted for 19 missions and fell within the 90% confidence interval for 13 missions. For the 21 STS missions, the total number of medical events was overpredicted for 3 missions, fell within the 90% confidence interval for 16 missions, and was underpredicted for 2 missions. Combined, 29 missions were in range, 22 were overpredicted, and 2 were underpredicted. The predicted LOCL probability for the 32 ISS missions, the 21 STS missions, and the combined ISS and STS missions was consistent with the zero LOCL events observed in the RWS referent data. The validation analysis included a comparison of the number of medical events predicted by IMPACT and the number of medical events observed in the RWS data on a condition-by-condition basis. For ISS missions, 50 conditions were in range, 52 conditions were statistically underpowered (not enough observed sample to draw any conclusions on precision), 8 conditions were overpredicted, and 9 conditions were underpredicted. Overall, only 14% (17/119) of conditions were out of range for STS missions, 40 conditions were in range, 59 conditions were statistically underpowered, 10 conditions were overpredicted, and 10 conditions were underpredicted. Overall, only 17% (20/119) of conditions were out of range. For combined ISS and STS missions, 11 conditions were overpredicted, and 11 conditions were underpredicted. Overall, only 18% (22/119) of conditions were out of range. For combined ISS and STS missions, 49 conditions were in range, 46 conditions were statistically underpowered, 18 conditions were overpredicted, and 8 conditions were underpredicted. Overall, 21% (26/121) of conditions were out of range. Conclusion The results of this validation analysis should not be interpreted as a pass/fail test of the validity of IMPACT. Instead, this validation analysis should be used to assess some of the IMPACT outcomes in terms of consistencies and inconsistencies with the ISS and STS RWS referent data.

L. Boley↗
NASA NTRS1988

Quasar microlensing and dark matter

The amplification of quasar brightness due to gravitational lensing by foreground objects is discussed. It is shown that a recently published sample of X-ray-selected quasars behind foreground galaxies shows a statistically significant brightening compared to a control sample. Correlations with galaxy redshift and impact parameter predicted by microlensing are also demonstrated. A technique is described to measure the mean density of the lenses from a small number of identified cases of microlensing. It is shown that, in this sample, amplification bias is important in determining the mean intensity enhancement and must be included in the density estimate. Assuming that at least two of the four intrinsically brightest quasars behind galaxies are indeed microlensed, the present data yield a formal lower limit on the mean density parameter of lenses Omega(l) greater than 0.25 at 95 percent confidence. These data also imply that a considerable quantity of dark matter exists in macroscopic objects outside the visible parts of galaxies but is still highly correlated with them.

Rix, Hans-Walter↗
NASA NTRS2007

Gamma-Ray Burst Afterglows as Probes of Environment and Blastwave Physics II: The Distribution of p and Structure of the Circumburst Medium

We constrain blastwave parameters and the circumburst media of a subsample of BeppoSAX Gamma-Ray Bursts. For this sample we derive the values of the injected electron energy distribution index, p, and the density structure index of the circumburst medium, k, from simultaneous spectral fits to their X-ray, optical and nIR afterglow data. The spectral fits have been done in count space and include the effects of metallicity, and are compared with the previously reported optical and X-ray temporal behaviour. Assuming the fireball model, we can find a mean value of p for the sample as a whole of 2.035. A statistical analysis Of the distribution demonstrates that the p values in this sample are inconsistent with a single universal value for p at the 3sigma level or greater. This approach provides us with a measured distribution of circumburst density structures rather than considering only the cases of k = 0 (homogeneous) and k = 2 (wind-like). We find five GRBs for which k can be well constrained, and in four of these cases the circumburst medium is clearly wind-like. The fifth source has a value of 0 less than or equal to k less than or equal to 1, consistent with a homogeneous circumburst medium.

Starling, R. L. C.↗
DOE OSTI2015

ENIGMAS FROM THE SLOAN DIGITAL SKY SURVEY DR7 KLEINMAN WHITE DWARF CATALOG

We report results from a continuation of our searches for high field magnetic white dwarfs (WDs) paired in a detached binary with non-degenerate companions. We made use of the Sloan Digital Sky Survey DR7 catalog of Kleinman et al. (2013) with 19,712 spectroscopically identified WDs. These include 1735 WD plus M dwarf detached pairs (almost 10% of the Kleinman et al.'s list). No new pairs were found, although we did recover the polar (AM Herculis system) ST LMi in a low state of accretion. With the larger sample the original situation reported 10 yr ago remains intact now at a much higher level of statistical significance: in the selected SDSS sample, high field magnetic WDs are not found in an apparently detached pairing with an M dwarf, unless they are a magnetic cataclysmic variable (CV) in a low state of accretion. This finding strengthens the case that the fields in the isolated high field magnetic WDs are generated by stellar mergers but also raises questions on the nature of the progenitors of the magnetic CVs.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2019

Statistical detection of differentially abundant ions in mass spectrometry-based imaging experiments with complex designs

Mass Spectrometry Imaging (MSI) characterizes changes in chemical composition between regions of biological samples such as tissues. This translates into a statistical goal of class comparison, i.e. determining analytes that change in abundance between conditions more systematically than as expected by random variation. To reach accurate and reproducible conclusions, statistical analysis must appropriately reflect the initial research question, the design of the MSI experiment, and all the associated sources of variation. This manuscript highlights the importance of following these general statistical principles. Using the example of two case studies with complex experimental designs, and with dierent strategies of data acquisition, we demonstrate the extent to which choices made at key points of this workflow impact the results, and provide suggestions for appropriate design and analysis of MSI experiments that aim at detecting dierentially abundant analytes.

NanoDESI, mass spectrometry, MSIQuickView↗
DOE OSTI2016

Immunophenotype Discovery, Hierarchical Organization, and Template-Based Classification of Flow Cytometry Samples

We describe algorithms for discovering immunophenotypes from large collections of flow cytometry samples and using them to organize the samples into a hierarchy based on phenotypic similarity. The hierarchical organization is helpful for effective and robust cytometry data mining, including the creation of collections of cell populations’ characteristic of different classes of samples, robust classification, and anomaly detection. We summarize a set of samples belonging to a biological class or category with a statistically derived template for the class. Whereas individual samples are represented in terms of their cell populations (clusters), a template consists of generic meta-populations (a group of homogeneous cell populations obtained from the samples in a class) that describe key phenotypes shared among all those samples. We organize an FC data collection in a hierarchical data structure that supports the identification of immunophenotypes relevant to clinical diagnosis. A robust template-based classification scheme is also developed, but our primary focus is in the discovery of phenotypic signatures and inter-sample relationships in an FC data collection. This collective analysis approach is more efficient and robust since templates describe phenotypic signatures common to cell populations in several samples while ignoring noise and small sample-specific variations. We have applied the template-based scheme to analyze several datasets, including one representing a healthy immune system and one of acute myeloid leukemia (AML) samples. The last task is challenging due to the phenotypic heterogeneity of the several subtypes of AML. However, we identified thirteen immunophenotypes corresponding to subtypes of AML and were able to distinguish acute promyelocytic leukemia (APL) samples with the markers provided. Clinically, this is helpful since APL has a different treatment regimen from other subtypes of AML. Core algorithms used in our data analysis are available in the flowMatch package at www.bioconductor.org. It has been downloaded nearly 6,000 times since 2014.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1982

On intracluster Faraday rotation. II - Statistical analysis

The comparison of a reliable sample of radio source Faraday rotation measurements seen through rich clusters of galaxies, with sources seen through the outer parts of clusters and therefore having little intracluster Faraday rotation, indicates that the distribution of rotation in the former population is broadened, but only at the 80% level of statistical confidence. Employing a physical model for the intracluster medium in which the square root of magnetic field strength/turbulent cell per gas core radius number ratio equals approximately 0.07 microgauss, a Monte Carlo simulation is able to reproduce the observed broadening. An upper-limit analysis figure of less than 0.20 microgauss for the field strength/turbulent cell ratio, combined with lower limits on field strength imposed by limitations on the Compton-scattered flux, shows that intracluster magnetic fields must be tangled on scales greater than about 20 kpc.

Lawler, J. M.↗