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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 775 records · Page 43

Accelerating Hamiltonian Monte Carlo for Bayesian inference in neural networks and neural operators

Hamiltonian Monte Carlo (HMC) is a powerful and accurate method to sample from the posterior distribution in Bayesian inference. However, HMC techniques are computationally demanding for Bayesian neural networks due to the high dimensionality of the network’s parameter space and the non-convexity of their posterior distributions. Therefore, various approximation techniques, such as variational inference (VI) or stochastic gradient MCMC, are often employed to infer the posterior distribution of the network parameters. Such approximations introduce inaccuracies in the inferred distributions, resulting in unreliable uncertainty estimates. In this work, we propose a hybrid approach that combines inexpensive VI and accurate HMC methods to efficiently and accurately quantify uncertainties in neural networks and neural operators. The proposed approach leverages an initial VI training on the full network. We examine the influence of individual parameters on the prediction uncertainty, which shows that a large proportion of the parameters do not contribute substantially to uncertainty in the network predictions. This information is then used to significantly reduce the dimension of the parameter space, and HMC is performed only for the subset of network parameters that strongly influence prediction uncertainties. This yields a framework for accelerating the full batch HMC for posterior inference in neural networks. We demonstrate the efficiency and accuracy of the proposed framework on deep neural networks and operator networks, showing that inference can be performed for large networks with tens to hundreds of thousands of parameters. Finally, we show that this method can effectively learn surrogates for complex physical systems by modeling the operator that maps from upstream conditions to wall-pressure data on a cone in hypersonic flow.

Bayesian inference↗

Toward lower-diameter large-scale HPC and data center networks with co-packaged optics

We investigate the advantages of using co-packaged optics for building low-diameter, large-scale high-performance computing (HPC) and data center networks. The increased escape bandwidth offered by co-packaged optics can enable high-radix switch implementations of more than 150 switch ports, which can be combined with data rates of up to 400 Gb/s per port. From the network architecture perspective, the key benefits of using co-packaged optics in future fat-tree networks include (a) the ability to implement large-scale topologies of > <#comment/> 11 , 000 end points by eliminating the need for a third switching layer and (b) the ability to provide up to 4 × <#comment/> higher bisection bandwidth compared to existing solutions, reducing at the same time the number of required switch application-specific integrated circuits by > <#comment/> 80 % <#comment/> . From the network operation perspective, both reduced energy consumption and lower packet delays can be achieved since fewer hops are required; i.e., packets need to traverse fewer serializer/deserializer lanes and fewer switch buffers, which reduces the probability of contending with other packets and improves the tolerance of network congestion. The performance of the proposed architecture is evaluated via discrete-event simulations for a wide range of representative HPC synthetic-traffic cases that include both hotspot and non-hotspot scenarios. The simulation results suggest that co-packaged optics form a promising solution to keep up with bandwidth scaling in future networks, while the reduced number of switching layers can lead to significant mean packet delay improvements that start from 30% and reach up to 74% for high-load conditions.

Maniotis, Pavlos (ORCID:0000000244905253)↗

Parameter inference with deep jointly informed neural networks

Abstract A common challenge in modeling inertial confinement fusion (ICF) experiments with computer simulations is that many of the simulation inputs are unknown and cannot be directly measured. Often, parameters that are measured in the experiment are used to infer the unknown inputs by solving the inverse problem: finding the set of simulation inputs that result in outputs consistent with the experimental observations. In ICF, this process is often referred to as a “post‐shot analysis.” Post‐shot analyses are challenging as the inverse problem is often highly degenerate, the input parameter space is vast, and simulations are computationally expensive. In this work, deep neural network models equipped with model uncertainty estimates are used to train inverse models, which map directly from output to input space, to find the distribution of post‐shot simulations that are consistent with experimental observations. The inverse model approach is compared to Markov chain Monte Carlo (MCMC) sampling of the forward model, which maps from input to output space, for parameter inference tasks of varying complexity. The inverse models perform best when searching vast parameter spaces for post‐shot simulations that are consistent with a large number of observables, where MCMC sampling can be prohibitively expensive. We demonstrate how augmenting inverse models with autoencoders enable the inclusion of several dozen observables in the inverse mapping, reducing the degeneracy of the model and improving the accuracy of the post‐shot analysis.

Humbird, Kelli D.↗

Privacy-Preserving Control of Partitioned Energy Resources

Distributed energy resources are an increasingly important part of the electric grid. We examine the problem of partitioning a distributed energy resource among many users while providing privacy to them. In this model, clients can send requests to a server, the server can verify that the requests are valid and aggregate them, but it cannot see the actual values in the requests. Without privacy, each user is forced to reveal their daily schedule or energy use. Energy resources add a novel challenge that prior systems do not address: they require verifying limits on private power (a rate over time) and energy (a sum) values. Furthermore, the cryptographic mechanisms must run on embedded energy control systems. We describe Weft, a novel cryptographic system that verifies both power (rate) and energy (integral) constraints on private client values and aggregates them. The key insight behind the approach is to rely on additively homomorphic secret shares, which allows servers to compute sums from rates. We present 3 cryptographic proof systems with different system trade-off for embedded systems: bit-splitting proofs minimize memory use, sorting proofs minimize computation, and commitment proofs minimize network communication. Using bit-splitting proofs, it takes an IoT client using a CortexM microcontroller 4 minutes of compute time to privately control its share of an energy resource for a day at 20s granularity.

Laufer, Evan↗

Cusps enable line attractors for neural computation

Here, line attractors in neuronal networks have been suggested to be the basis of many brain functions, such as working memory, oculomotor control, head movement, locomotion, and sensory processing. In this paper, we make the connection between line attractors and pulse gating in feed-forward neuronal networks. In this context, because of their neutral stability along a one-dimensional manifold, line attractors are associated with a time-translational invariance that allows graded information to be propagated from one neuronal population to the next. To understand how pulse-gating manifests itself in a high-dimensional, nonlinear, feedforward integrate-and-fire network, we use a Fokker-Planck approach to analyze system dynamics. We make a connection between pulse-gated propagation in the Fokker-Planck and population-averaged mean-field (firing rate) models, and then identify an approximate line attractor in state space as the essential structure underlying graded information propagation. An analysis of the line attractor shows that it consists of three fixed points: a central saddle with an unstable manifold along the line and stable manifolds orthogonal to the line, which is surrounded on either side by stable fixed points. Along the manifold defined by the fixed points, slow dynamics give rise to a ghost. We show that this line attractor arises at a cusp catastrophe, where a fold bifurcation develops as a function of synaptic noise; and that the ghost dynamics near the fold of the cusp underly the robustness of the line attractor. Understanding the dynamical aspects of this cusp catastrophe allows us to show how line attractors can persist in biologically realistic neuronal networks and how the interplay of pulse gating, synaptic coupling, and neuronal stochasticity can be used to enable attracting one-dimensional manifolds and, thus, dynamically control the processing of graded information.

59 BASIC BIOLOGICAL SCIENCES↗

HSV ‐1 ICP0 dimer domain adopts a novel β‐barrel fold

Abstract Infected cell protein 0 (ICP0) is an immediate‐early regulatory protein of herpes simplex virus 1 (HSV‐1) that possesses E3 ubiquitin ligase activity. ICP0 transactivates viral genes, in part, through its C‐terminal dimer domain (residues 555–767). Deletion of this dimer domain results in reduced viral gene expression, lytic infection, and reactivation from latency. Since ICP0's dimer domain is associated with its transactivation activity and efficient viral replication, we wanted to determine the structure of this specific domain. The C‐terminus of ICP0 was purified from bacteria and analyzed by X‐ray crystallography to solve its structure. Each subunit or monomer in the ICP0 dimer is composed of nine β‐strands and two α‐helices. Interestingly, two adjacent β‐strands from one monomer “reach” into the adjacent subunit during dimer formation, generating two β‐barrel‐like structures. Additionally, crystallographic analyses indicate a tetramer structure is formed from two β‐strands of each dimer, creating a “stacking” of the β‐barrels. The structural protein database searches indicate the fold or structure adopted by the ICP0 dimer is novel. The dimer is held together by an extensive network of hydrogen bonds. Computational analyses reveal that ICP0 can either form a dimer or bind to SUMO1 via its C‐terminal SUMO‐interacting motifs but not both. Understanding the structure of the dimer domain will provide insights into the activities of ICP0 and, ultimately, the HSV‐1 life cycle.

Biochemistry & Molecular Biology↗

Using advanced data structures to enable responsive security monitoring

Write-optimized data structures (WODS), offer the potential to keep up with cyberstream event rates and give sub-second query response for key items like IP addresses. These data structures organize logs as the events are observed. To work in a real-world environment and not fill up the disk, WODS must efficiently expire older events. As the basis for our research into organizing security monitoring data, we implemented a tool, called Diventi, to index IP addresses in connection logs using RocksDB (a write-optimized LSM tree). In this work, we extended Diventi to automatically expire data as part of the data structures’ normal operations. We guarantee that Diventi always tracks the N most recent events and tracks no more than N + k events for a parameter k < N, while ensuring the index is opportunistically pruned. To test Diventi at scale in a controlled environment, we used anonymized traces of IP communications collected at SuperComputing 2019. We synthetically extended the 2.4 billion connection events to 100 billion events. We tested Diventi vs. Elasticsearch, a common log indexing tool. In our test environment, Elasticsearch saw an ingestion rate of at best 37,000 events/s while Diventi sustained ingestion rates greater than 171,000 events/s. Our query response times were as much as 100 times faster, typically answering queries in under 80 ms. Furthermore, we saw no noticeable degradation in Diventi from expiration. We have deployed Diventi for many months where it has performed well and supported new security analysis capabilities.

97 MATHEMATICS AND COMPUTING↗

The contributions of microclimatic information in advancing ecosystem science

Drawing upon over 100 years of scholarly work on microclimate, we first present an overview of the history, key references, and critical issues surrounding the collection and utilization of microclimate records in ecosystem studies. We place particular emphasis on addressing specific and pressing issues related to the applications of microclimate at the community-ecosystem-landscape level, excluding those of controlled experiment such as growth chambers and greenhouses. Specifically, we: (1) highlight some key issues concerning the collection, quality assurance/quality control (QA/QC), and utilization of microclimatic data in ecosystem studies; (2) revisit microclimatic responses to the structural changes of ecosystems and landscapes; and (3) emphasize the significance of microclimate in understanding major ecosystem/landscape processes and functions. Vapor pressure deficit (VPD) is particularly emphasized for its calculation and use because of its burgeoning applications in the literature. Case studies for each of the three thematic topics are provided with selected references to demonstrate challenges and solutions. As the scientific community gears up to enhance microclimatic stations, we envision significant increases in the use of smart sensors, wireless access, networking, open databases, and computational capabilities. Understanding and addressing some of the issues raised in this synthesis paper may help advance microclimate research and foster collaboration with other relevant disciplines, such as ecosystem science.

54 ENVIRONMENTAL SCIENCES↗

Machine learning materials physics: Surrogate optimization and multi-fidelity algorithms predict precipitate morphology in an alternative to phase field dynamics

Machine learning has been effective at detecting patterns and predicting the response of systems that behave free of natural laws. Examples include learning crowd dynamics, recommender systems and autonomous mobility. There also have been applications to the search for new materials that draw upon big-data classification problems. Though, when it comes to physical systems governed by conservation laws, the role of machine learning has been more limited. Here, we present our recent work in exploring the role of machine learning methods in discovering, or aiding, the search for physics. Specifically, we focus on using machine learning algorithms to represent high-dimensional free energy surfaces with the goal of identifying precipitate morphologies in alloy systems. Traditionally, this problem has been approached by combining phase field models, which impose first-order dynamics, with elasticity, to traverse a free energy landscape in search of minima. Equilibrium precipitate morphologies occur at these minima. Here, we exploit the machine learning methods to represent high-dimensional data, combined with surrogate optimization, sensitivity analysis and multifidelity modeling as an alternate framework to explore phenomena controlled by energy extremization. This combination of data-driven methods offers an alternative to the imposition of first-order dynamics via phase field methods, and represents one aspect of applying machine learning to materials physics.

42 ENGINEERING↗

Life cycle impact assessment of home energy management systems (HEMS) using dynamic emissions factors for electricity in Finland

Decarbonising the European economy is a long-term goal in which the residential sector will play a significant role. Smart buildings for energy management are one means of decarbonisation, by reducing energy consumption and related emissions. This study investigated the environmental impacts of smart house automation using life cycle impact assessment. The ReCiPe method was selected for use, in combination with dynamic emissions factors for electricity in Finland. The results indicated that a high level of technology deployment may be counter-effective, due to high electricity consumption by the sensor network, automation system and computing devices. The results also indicated that number of inhabitants per household directly affected the environmental impacts of home automation. A single-person household saw its environmental impacts increase by 15%, while those of a five-person household increased by 3% in the worst-case scenario. The manufacturing phase contributed the major share of environmental impacts, exceeding the use phase in multiple categories. These findings indicate that finding the sweet spot in which technology can promote decarbonisation will be crucial to achieving the goal of a low‑carbon economy. - Highlights: •HEMS did not reduce the overall environmental impact of households. •Environmental impacts of HEMS are greater for single inhabitant households. •Energy efficiency of sensing devices must drastically increase to promote decarbonisation. •The highest life cycle environmental impacts of electronics are during the manufacturing phase. •Raising awareness is a critical part in decreasing the environmental impact of households.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Efficient photon coupling from a diamond nitrogen vacancy center by integration with silica fiber

A central goal in quantum information science is to efficiently interface photons with single optical modes for quantum networking and distributed quantum computing. Here, we introduce and experimentally demonstrate a compact and efficient method for the low-loss coupling of a solid-state qubit, the nitrogen vacancy (NV) center in diamond, with a single-mode optical fiber. In this approach, single-mode tapered diamond waveguides containing exactly one high quality NV memory are selected and integrated on tapered silica fibers. Numerical optimization of an adiabatic coupler indicates that near-unity-efficiency photon transfer is possible between the two modes. Experimentally, we find an overall collection efficiency between 16% and 37% and estimate a single photon count rate at saturation above 700 kHz. This integrated system enables robust, alignment-free, and efficient interfacing of single-mode optical fibers with single photon emitters and quantum memories in solids.

Optics↗

Simple spatial scaling rules behind complex cities

Although most of wealth and innovation have been the result of human interaction and cooperation, we are not yet able to quantitatively predict the spatial distributions of three main elements of cities: population, roads, and socioeconomic interactions. By a simple model mainly based on spatial attraction and matching growth mechanisms, we reveal that the spatial scaling rules of these three elements are in a consistent framework, which allows us to use any single observation to infer the others. All numerical and theoretical results are consistent with empirical data from ten representative cities. In addition, our model can also provide a general explanation of the origins of the universal super- and sub-linear aggregate scaling laws and accurately predict kilometre-level socioeconomic activity. Our work opens a new avenue for uncovering the evolution of cities in terms of the interplay among urban elements, and it has a broad range of applications.

97 MATHEMATICS AND COMPUTING↗

All-silicon quantum light source by embedding an atomic emissive center in a nanophotonic cavity

Silicon is the most scalable optoelectronic material but has suffered from its inability to generate directly and efficiently classical or quantum light on-chip. Scaling and integration are the most fundamental challenges facing quantum science and technology. We report an all-silicon quantum light source based on a single atomic emissive center embedded in a silicon-based nanophotonic cavity. We observe a more than 30-fold enhancement of luminescence, a near-unity atom-cavity coupling efficiency, and an 8-fold acceleration of the emission from the all-silicon quantum emissive center. Our work opens immediate avenues for large-scale integrated cavity quantum electrodynamics and quantum light-matter interfaces with applications in quantum communication and networking, sensing, imaging, and computing.

36 MATERIALS SCIENCE↗

Exploring End-to-end Deep Learning Applications for Event Classification at CMS

An essential part of new physics searches at the Large Hadron Collider (LHC) at CERN involves event classification, or distinguishing potential signal events from those coming from background processes. Current machine learning techniques accomplish this using traditional hand-engineered features like particle 4-momenta, motivated by our understanding of particle decay phenomenology. While such techniques have proven useful for simple decays, they are highly dependent on our ability to model all aspects of the phenomenology and detector response. Meanwhile, powerful deep learning algorithms are capable of not only training on high-level features, but of performing feature extraction. In computer vision, convolutional neural networks have become the state-of-the-art for many applications. Motivated by their success, we apply deep learning algorithms to low-level detector data from the 2012 CMS Simulated Open Data to directly learn useful features, in what we call, end-to-end event classification. We demonstrate the power of this approach in the context of a physics search and offer solutions to some of the inherent challenges, such as image construction, image sparsity, combining multiple sub-detectors, and de-correlating the classifier from the search observable, among others.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗