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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 775 records · Page 43

Remanent magnetization model for the broken ridge satellite magnetic anomaly

A crustal model for the interpretation of the Broken Ridge satellite magnetic anomaly was constructed from bathymetric data assuming an Airy-type isostatic compensation. An average crustal magnetization of 6 A.m is required to account for the observed anomaly amplitudes provided that the whole crust is homogeneously magnetized. In contrast, a model representing only the topographic expression of the Broken Ridge, above the surrounding sea floor, requires a magnetization of the order of 40 A.m-1. Since this latter figure is much higher than is to be expected from studies of magnetic properties of oceanic rocks, it is concluded that the majority of the crustal volume of Broken Ridge is magnetized relatively uniformly. The direction of the source magnetization is consistent with an inclination shallower than the present geomagnetic field and close to that of an axial dipole. Since a more northerly source location for Broken Ridge is contrary to the paleolatitude data it is though that the magnetization represents a magnetization obtained by averaging the geomagnetic field direction over a sufficient time to remove secular variation effects. This pattern is indicative of viscous magnetization.

Johnson, B. D.↗

Mechanism of Rad26-assisted rescue of stalled RNA polymerase II in transcription-coupled repair

Transcription-coupled repair is essential for the removal of DNA lesions from the transcribed genome. The pathway is initiated by CSB protein binding to stalled RNA polymerase II. Mutations impairing CSB function cause severe genetic disease. Yet, the ATP-dependent mechanism by which CSB powers RNA polymerase to bypass certain lesions while triggering excision of others is incompletely understood. Here we build structural models of RNA polymerase II bound to the yeast CSB ortholog Rad26 in nucleotide-free and bound states. This enables simulations and graph-theoretical analyses to define partitioning of this complex into dynamic communities and delineate how its structural elements function together to remodel DNA. We identify an allosteric pathway coupling motions of the Rad26 ATPase modules to changes in RNA polymerase and DNA to unveil a structural mechanism for CSB-assisted progression past less bulky lesions. Our models allow functional interpretation of the effects of Cockayne syndrome disease mutations.

59 BASIC BIOLOGICAL SCIENCES↗

Automated map sharpening by maximization of detail and connectivity

An algorithm for automatic map sharpening is presented that is based on optimization of the detail and connectivity of the sharpened map. The detail in the map is reflected in the surface area of an iso-contour surface that contains a fixed fraction of the volume of the map, where a map with high level of detail has a high surface area. The connectivity of the sharpened map is reflected in the number of connected regions defined by the same iso-contour surfaces, where a map with high connectivity has a small number of connected regions. By combining these two measures in a metric termed the `adjusted surface area', map quality can be evaluated in an automated fashion. This metric was used to choose optimal map-sharpening parameters without reference to a model or other interpretations of the map. Map sharpening by optimization of the adjusted surface area can be carried out for a map as a whole or it can be carried out locally, yielding a locally sharpened map. To evaluate the performance of various approaches, a simple metric based on map–model correlation that can reproduce visual choices of optimally sharpened maps was used. The map–model correlation is calculated using a model with B factors (atomic displacement factors; ADPs) set to zero. This model-based metric was used to evaluate map sharpening and to evaluate map-sharpening approaches, and it was found that optimization of the adjusted surface area can be an effective tool for map sharpening.

59 BASIC BIOLOGICAL SCIENCES↗

Reprocessing Models for the Optical Light Curves of Hypervariable Quasars from the Sloan Digital Sky Survey Reverberation Mapping Project

We explore reprocessing models for a sample of 17 hypervariable quasars, taken from the Sloan Digital Sky Survey Reverberation Mapping project, which all show coordinated optical luminosity hypervariability with amplitudes of factors ≳2 between 2014 and 2020. We develop and apply reprocessing models for quasar light curves in simple geometries that are likely to be representative of quasar inner environments. In addition to the commonly investigated thin-disk model, we include the thick-disk and hemisphere geometries. The thick-disk geometry could, for instance, represent a magnetically elevated disk, whereas the hemisphere model can be interpreted as a first-order approximation for any optically thick out-of-plane material caused by outflows/winds, warped/tilted disks, and so on. Of the 17 quasars in our sample, 11 are best-fitted by a hemisphere geometry, five are classified as thick disks, and both models fail for just one object. We highlight the successes and shortcomings of our thermal reprocessing models in case studies of four quasars that are representative of the sample. While reprocessing is unlikely to explain all of the variability that we observe in quasars, we present our classification scheme as a starting point for revealing the likely geometries of reprocessing for quasars in our sample and hypervariable quasars in general.

79 ASTRONOMY AND ASTROPHYSICS↗

Stable isotopes contain substantial additive information about terrestrial carbon and water cycling

Abstract Stable isotope ratios of H ( δ 2 H ), O ( δ 18 O), and C ( δ 13 C) are linked to key biogeochemical processes of the water and carbon cycles; however, the degree to which isotope-associated processes are reflected in macroscale ecosystem flux observations remains unquantified. Here through formal information assessment, new measurements of δ 13 C of net ecosystem exchange ( NEE ) as well as δ 2 H and δ 18 O of latent heat ( LH ) fluxes across the United States National Ecological Observation Network (NEON) are used to determine conditions under which isotope measurements are informative of environmental exchanges. We find all three isotopic datasets individually contain comparable amounts of information about NEE and LH fluxes as wind speed observations. Such information from isotope measurements, however, is largely unique. Generally, δ 13 C provides more information about LH as aridity increases or mean annual precipitation decreases. δ 2 H provides more information about LH as temperatures or mean annual precipitation decreases, and also provides more information about NEE as temperatures decrease. Overall, we show that the stable isotope datasets collected by NEON contribute non-trivial amounts of new information about bulk environmental fluxes useful for interpreting biogeochemical and ecohydrological processes at landscape scales. However, the utility of this new information varies with environmental conditions at continental scales. This study provides an approach for quantifying the value adding non-traditional sensing approaches to environmental monitoring sites and the patterns identified here are expected to aid in modeling and data interpretation efforts focused on constraining carbon and water cycles’ mechanisms.

54 ENVIRONMENTAL SCIENCES↗

Pahranagat Shear System, Lincoln County, Nevada

The author has identified the following significant results. A structural model which relates strike-slip deformation to Basin Range extensional tectonics was formulated on the basis of analysis and interpreatation of ERTS-1 MSS imagery over southern Lincoln County, Nevada. Study of published geologic data and field reconnaissance of key areas has been conducted to support the ERTS-1 data interpretation. The structural model suggests that a left-lateral strike-slip fault zone, called the Pahranagat Shear System, formed as a transform fault separating two areas of east-west structural extension.

Liggett, M. A.↗

Neural networks for estimation of divertor conditions in DIII-D using C III imaging

Deep learning approaches have been applied to images of C III emission in the lower divertor of DIII-D to develop models for estimating the level of detachment and magnetic configuration (X-point location and strike point radial location). The poloidal distance from the target to the C III emission front is used to represent the level of detachment. The models perform well on a test dataset not used in training, achieving $F_1$ scores as high as 0.99 for detachment state classification and root mean squared error (RMSE) as low as 2cm for front location regression. Predictions for shots with intermittent reattachment are studied, with class activation mapping used to aid in interpretation of the model predictions. Based on the success of these models, a third model was trained to predict the X-point location and strike point radial position from C III images. Though the dataset covers only a small range of possible magnetic configurations, the model shows promising results, achieving RMSE around 1cm for the test data.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Scientific machine learning for closure models in multiscale problems: A review

Here, closure problems are omnipresent when simulating multiscale systems, where some quantities and processes cannot be fully prescribed despite their effects on the simulation's accuracy. Recently, scientific machine learning approaches have been proposed as a way to tackle the closure problem, combining traditional (physics-based) modeling with data-driven (machine-learned) techniques, typically through enriching differential equations with neural networks. This paper reviews the different reduced model forms, distinguished by the degree to which they include known physics, and the different objectives of a priori and a posteriori learning. The importance of adhering to physical laws (such as symmetries and conservation laws) in choosing the reduced model form and choosing the learning method is discussed. The effect of spatial and temporal discretization and recent trends toward discretization-invariant models are reviewed. In addition, we make the connections between closure problems and several other research disciplines: inverse problems, Mori-Zwanzig theory, and multi-fidelity methods. In conclusion, much progress has been made with scientific machine learning approaches for solving closure problems, but many challenges remain. In particular, the generalizability and interpretability of learned models is a major issue that needs to be addressed further.

97 MATHEMATICS AND COMPUTING↗

Single and Double ITCZ in Aqua-Planet Models with Globally Uniform Sea Surface Temperature and Solar Insolation: An Interpretation

It has been known for more than a decade that an aqua-planet model with globally uniform sea surface temperature and solar insolation angle can generate ITCZ (intertropical convergence zone). Previous studies have shown that the ITCZ under such model settings can be changed between a single ITCZ over the equator and a double ITCZ straddling the equator through one of several measures. These measures include switching to a different cumulus parameterization scheme, changes within the cumulus parameterization scheme, and changes in other aspects of the model design such as horizontal resolution. In this paper an interpretation for these findings is offered. The latitudinal location of the ITCZ is the latitude where the balance of two types of attraction on the ITCZ, both due to earth's rotation, exists. The first type is equator-ward and is directly related to the earth's rotation and thus not sensitive to model design changes. The second type is poleward and is related to the convective circulation and thus is sensitive to model design changes. Due to the shape of the attractors, the balance of the two types of attractions is reached either at the equator or more than 10 degrees away from the equator. The former case results in a single ITCZ over the equator and the latter case a double ITCZ straddling the equator.

Chao, Winston C.↗

Mass-radius relationships in icy satellites

Using published laboratory data for H2O ice, a modeling technique was developed by which the bulk density, density and temperature profile, rotational moment of inertia, central pressure, and location of the rock-ice interface can all be obtained as a function of the radius, the heliocentric distance, and the silicate composition. Models of the interiors of Callisto, Ganymede, Europa, Rhea, and Titan are given, consistent with present mass and radius data. The radius and mass of spheres of ice under self-gravitation for two different temperature classes are given (103 and 77 deg K). Measurements of mass, radius and I/MR2 by spacecraft can be interpreted by this model to yield substantial information about the internal structure and the ice/rock ratio of the icy satellites of Jupiter and Saturn.

Lupo, M. J.↗

Determining the Cause of Reduced Concurrent Flame Spread over Thin Solid Fuels in Low Pressure and Low Gravity

The spread of flames over the surface of solid combustible materials is affected by the environmental conditions. Variables such as flow velocity, oxygen concentration, ambient pressure, partial gravity or microgravity, may change the material flammability and influence the fire dynamics. This is an important fire safety issue for space exploration vehicles and space habitats which will very likely have different environments than those currently used on the International Space Station, such as reduced pressure and enriched oxygen concentration (SEA). However, testing experimentally the materials to be used and qualified for space exploration under these conditions is a difficult and expensive task. Here, numerical modeling is used to understand the dominant physico-chemical processes on the concurrent flame spread over thin fabrics under reduced ambient pressure (and in turn, buoyancy) and variable gravitational conditions. The numerical model uses the Fire Dynamics Simulator (FDS6) code with a single-step Arrhenius reaction rate for the solid phase decomposition. Different models are tested for the gas phase combustion kinetics. The model results are validated with experimental results obtained at similar reduced ambient pressure and flow conditions at 1 g. It is shown that as ambient pressure is reduced the flame spread rate over a thin fabric is also reduced, both experimentally and numerically. Numerical results are compared to an analytical approach previously developed to explain the experimental trends. Further interpretation of the model results provides information regarding the physics of the process and how they are affected by the lower pressure environments and gravity conditions. The results of this work provide guidance for potential on-earth testing for fire safety design in spacecraft and space habitats.

Fire Safety↗

Determining the Cause of Reduced Concurrent Flame Spread over Thin Solid Fuels in Low Pressure and Low Gravity

The spread of flames over the surface of solid combustible materials is affected by the environmental conditions. Variables such as flow velocity, oxygen concentration, ambient pressure, partial gravity or microgravity, may change the material flammability and influence the fire dynamics. This is an important fire safety issue for space exploration vehicles and space habitats which will very likely have different environments than those currently used on the International Space Station, such as reduced pressure and enriched oxygen concentration (SEA). However, testing experimentally the materials to be used and qualified for space exploration under these conditions is a difficult and expensive task. Here, numerical modeling is used to understand the dominant physico-chemical processes on the concurrent flame spread over thin fabrics under reduced ambient pressure (and in turn, buoyancy) and variable gravitational conditions. The numerical model uses the Fire Dynamics Simulator (FDS6) code with a single-step Arrhenius reaction rate for the solid phase decomposition. Different models are tested for the gas phase combustion kinetics. The model results are validated with experimental results obtained at similar reduced ambient pressure and flow conditions at 1 g. It is shown that as ambient pressure is reduced the flame spread rate over a thin fabric is also reduced, both experimentally and numerically. Numerical results are compared to an analytical approach previously developed to explain the experimental trends. Further interpretation of the model results provides information regarding the physics of the process and how they are affected by the lower pressure environments and gravity conditions. The results of this work provide guidance for potential on-earth testing for fire safety design in spacecraft and space habitats.

microgravity↗

Machine learning for analysis of atomic spectral data

Physics based forward models are the basis on which many experimental diagnostics are interpreted. For some diagnostics, models can be computationally expensive which precludes their use in real time analysis. Reduced models have the potential to capture sufficient physics thereby enabling the desired real time analysis. Using statistical inference and machine learning techniques the application of reduced models for inversion of atomic spectral data used to diagnose magnetic fields in a plasma will be examined. Two approaches are considered, (a) a reduction of the forward model where traditional inversion can be performed on the proxy model, and (b) a reduction of the direct inverse where parameters are a function of measured signal. The resulting inversion is sufficiently fast to be utilized in an online context for digital twinning, and ultimately real-time prediction, design, and control of plasma systems, such as tokamaks. Furthermore, these methods will be demonstrated on both simulated and experimentally measured data.

74 ATOMIC AND MOLECULAR PHYSICS↗

Modeling Electron Acceleration and Transport in the Early Impulsive Phase of the 2017 September 10th Solar Flare

The X8.2-class limb flare on 2017 September 10 is among the best studied solar flare events owing to its great similarity to the standard flare model and the broad coverage by multiple spacecraft and ground-based observations. These multiwavelength observations indicate that electron acceleration and transport are efficient in the reconnection and flare looptop regions. However, there lacks a comprehensive model for explaining and interpreting the multi-faceted observations. In this work, we model the electron acceleration and transport in the early impulsive phase of this flare. We solve the Parker transport equation that includes the primary acceleration mechanism during magnetic reconnection in the large-scale flare region modeled by MHD simulations. We find that electrons are accelerated up to several MeV and fill a large volume of the reconnection region, similar to the observations shown in microwaves. The electron spatial distribution and spectral shape in the looptop region agree well with those derived from the microwave and hard X-ray emissions before magnetic islands grow large and dominate the acceleration. Future emission modelings using the electron maps will enable direct comparison with microwave and hard X-ray observations. These results shed new light on the electron acceleration and transport in a broad region of solar flares within a data-constrained realistic flare geometry.

79 ASTRONOMY AND ASTROPHYSICS↗

An approximate model for backscattering and emission from land and sea

A two-scale model for near nadir backscattering based upon Semyonov's paper is developed for random surfaces with rms surface height smaller than one-half the incident wavelength. Reasonable estimates are obtained when this model is applied to interpret both land and sea measurements. By generalizing this approximate model (not corrected for scattering by small-scale roughnesses for scattering at large incident angles) to the bistatic case and then using it for emission calculations, reasonable estimates near nadir are also obtained when applied to emissions from the bare ground and the sea surfaces.

Fung, A. K.↗

Multi-Omics Reveals Temporal Scales of Carbon Metabolism in Synechococcus Elongatus PCC 7942 Under Light Disturbance

Central carbon metabolism in model cyanobacteria involves multiple pathways to adapt to energy-light limitations across diel cycles. However, the success in mechanistic modeling for phenotypic prediction of the protein regulators in the metabolic state depends on capturing the vast possibilities emerging from multiple regulatory pathways in complex biological processes. Here, we developed a physics-informed machine learning approach based on energy-landscape concepts to predict regulatory proteins responding to cyclic circadian and unforeseen light perturbations in cyanobacterial metabolic networks. Our approach provides interpretable de novo models for inferring gene expression dynamics from Synechococcus elongatus over diel cycles and using redox proteome analysis to distinguish immediate light-responsive elements from circadian-regulated processes in carbon metabolism pathways. We identified distinct temporal signatures with the analysis of the redox proteome: there was an immediate shift in cysteine redox states accompanied by a limited change in protein abundance under constant illumination and after 2 hours of darkness. This discovery indicates that the generation of reductants coordinates photoinduced electron transport with redox metabolic pathways in two discernable molecular mechanisms: fast redox-based protein modifications occur immediately after the light disturbance, followed by slow transcriptional regulations across networks. This temporal regulation reveals how metabolic networks integrate rapid light responses with programmed circadian rhythms to maintain cellular homeostasis under the light-energy limitations over the diel cycle.

Biomolecular & subcellular processes↗

Potential-specific structure at the hematite-electrolyte interface

The atomic-scale structure of interfaces between metal oxides and aqueous electrolytes controls their catalytic, geochemical, and corrosion behavior. Measurements that probe these interfaces in situ provide important details of ion and solvent arrangements, but atomically precise structural models do not exist for common oxide-electrolyte interfaces far from equilibrium. Using a novel cell, we measured the structure of the hematite (a-Fe 2 O 3 ) (110$\bar{2}$)-electrolyte interface under controlled electrochemical bias using synchrotron crystal truncation rod X ray scattering. At increasingly cathodic potentials, charge-compensating protonation of surface oxygen groups increases the coverage of specifically bound water while adjacent water layers displace outwardly and became disordered. Returning to open circuit potential leaves the surface in a persistent metastable protonation state. The flux of current and ions at applied potential is thus regulated by a unique interfacial electrolyte environment, suggesting that electrical double layer models should be adapted to the dynamically changing interfacial structure far from equilibrium.

electrochemistry↗

Interpretable Net Load Forecasting Using Smooth Multiperiodic Features

We consider the problem of forecasting net load over a horizon such as one day, using a trailing window of past net load values as well as date and time. We focus on three variations on this problem: point forecasts, marginal quantile forecasts, and generating conditional samples of the future value. We propose a method that relies on linear regression using some custom engineered time-based features to capture multiple periodicities, such as daily, weekly, and seasonal, and their interactions. Our proposed models are readily interpretable, and rely on efficient and reliable convex optimization [1] to fit. We illustrate our method on four years worth of hourly net load data, comparing predictions made with various subsets of the features.

Ogut, Mehmet G↗