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At least 775 records · Page 43

Vesta in the Light of Dawn, But Without HEDS?

The derivation of HEDs from Vesta is strongly supported by Dawn data [1], and these meterorites have made interpretations of Dawn spectra much more rigorous. Compared to the Moon, where samples became available after geologic mapping, the exploration of Vesta has been backwards. But what if HEDs had not been available or identified as vestan samples? What petrologic and geochemical predictions would have been possible using Dawn data, without the benefit of HEDs?

McSween, H. Y.↗

The distribution, orientation, and characteristics of natural fractures for Experiment 1 of the EGS Collab Project, Sanford Underground Research Facility

The EGS Collab project is focused on understanding and predicting permeability enhancement and evolution in crystalline rocks. To accomplish this, the project is creating a suite of intermediate-scale (~10-20 m) field test beds coupled with stimulation and interwell flow tests that will provide a basis to better understand the fracture geometries and processes that control heat transfer between rock and stimulated fractures. As part of the site characterization effort for the first experimental test bed, our team has worked on mapping the distribution, orientation, and nature of open and healed fractures exposed along the drift wall and within the eight bore holes drilled for this test bed. The fractures have been characterized through detailed description of continuous cores obtained from these boreholes, evaluation of televiewer logs, and mapping of fractures and seeps exposed along the drift wall. The fracture data are being compiled and interpreted for slip and dilation tendencies, and will be incorporated into coupled-process geomechanical flow and transport models to better constrain the planned flow and tracer tests.

15 GEOTHERMAL ENERGY↗

Correlations among the Optical Properties of Cirrus-Cloud Particles: Microphysical Interpretation

Cirrus measurements obtained with a ground-based polarization Raman lidar at 67.9 deg N in January 1997 reveal a strong positive correlation between the particle optical properties, specifically depolarization ratio delta(sub par) and extinction- to-backscatter (lidar) ratio S, for delta(sub par) less than approximately 40%, and an anti-correlation for delta(sub par) greater than approximately 40%. Over the length of the measurements the particle properties vary systematically. Initially, delta (sub par) approximately equals 60% and S approximately equals 10sr are observed. Then, with decreasing delta(sub par), S first increases to approximately 27sr (delta(sub par) approximately equals 40%) before decreasing to values around 10sr again (delta(sub par) approximately equals 20%). The analysis of lidar humidity and radiosonde temperature data shows that the measured optical properties stem from scattering by dry solid ice particles, while scattering by supercooled droplets, or by wetted or subliming ice particles can be excluded. For the microphysical interpretation of the lidar measurements, ray-tracing computations of particle scattering properties have been used. The comparison with the theoretical data suggests that the observed cirrus data can be interpreted in terms of size, shape, and, under the assumption that the lidar measurements of consecutive cloud segments can be mapped on the temporal development of a single cloud parcel moving along its trajectory, growth of the cirrus particles: Near the cloud top in the early stage of cirrus development, light scattering by nearly isometric particles that have the optical characteristics of hexagonal columns (short, column-like particles) is dominant. Over time the ice particles grow, and as the cloud base height extends to lower altitudes characterized by warmer temperatures they become morphologically diverse. For large S and depolarization values of approximately 40%, the scattering contributions of column- and plate-like particles are roughly the same. In the lower ranges of the cirrus clouds, light scattering is predominantly by plate-like ice particles. This interpretation assumes random orientation of the cirrus particles. Simulations with a simple model suggest, however, that the positive correlation between S and delta(sub par) which is observed for depolarization ratios less than 40% mainly at low cloud altitudes, can be alternatively explained by horizontal alignment of a fraction of the cirrus particle population.

Reichardt, J.↗

Machine learning for endoleak detection after endovascular aortic repair

Diagnosis of endoleak following endovascular aortic repair (EVAR) relies on manual review of multi-slice CT angiography (CTA) by physicians which is a tedious and time-consuming process that is susceptible to error. We evaluate the use of a deep neural network for the detection of endoleak on CTA for post-EVAR patients using a novel data efficient training approach. 50 CTAs and 20 CTAs with and without endoleak respectively were identified based on gold standard interpretation by a cardiovascular subspecialty radiologist. The Endoleak Augmentor, a custom designed augmentation method, provided robust training for the machine learning (ML) model. Predicted segmentation maps underwent post-processing to determine the presence of endoleak. The model was tested against 3 blinded general radiologists and 1 blinded subspecialist using a held-out subset (10 positive endoleak CTAs, 10 control CTAs). Model accuracy, precision and recall for endoleak diagnosis were 95%, 90% and 100% relative to reference subspecialist interpretation (AUC = 0.99). Accuracy, precision and recall was 70/70/70% for generalist1, 50/50/90% for generalist2, and 90/83/100% for generalist3. The blinded subspecialist had concordant interpretations for all test cases compared with the reference. In conclusion, our ML-based approach has similar performance for endoleak diagnosis relative to subspecialists and superior performance compared with generalists.

60 APPLIED LIFE SCIENCES↗

Statistical Considerations of Data Processing in Giovanni Online Tool

The GES DISC Interactive Online Visualization and Analysis Infrastructure (Giovanni) is a web-based interface for the rapid visualization and analysis of gridded data from a number of remote sensing instruments. The GES DISC currently employs several Giovanni instances to analyze various products, such as Ocean-Giovanni for ocean products from SeaWiFS and MODIS-Aqua; TOMS & OM1 Giovanni for atmospheric chemical trace gases from TOMS and OMI, and MOVAS for aerosols from MODIS, etc. (http://giovanni.gsfc.nasa.gov) Foremost among the Giovanni statistical functions is data averaging. Two aspects of this function are addressed here. The first deals with the accuracy of averaging gridded mapped products vs. averaging from the ungridded Level 2 data. Some mapped products contain mean values only; others contain additional statistics, such as number of pixels (NP) for each grid, standard deviation, etc. Since NP varies spatially and temporally, averaging with or without weighting by NP will be different. In this paper, we address differences of various weighting algorithms for some datasets utilized in Giovanni. The second aspect is related to different averaging methods affecting data quality and interpretation for data with non-normal distribution. The present study demonstrates results of different spatial averaging methods using gridded SeaWiFS Level 3 mapped monthly chlorophyll a data. Spatial averages were calculated using three different methods: arithmetic mean (AVG), geometric mean (GEO), and maximum likelihood estimator (MLE). Biogeochemical data, such as chlorophyll a, are usually considered to have a log-normal distribution. The study determined that differences between methods tend to increase with increasing size of a selected coastal area, with no significant differences in most open oceans. The GEO method consistently produces values lower than AVG and MLE. The AVG method produces values larger than MLE in some cases, but smaller in other cases. Further studies indicated that significant differences between AVG and MLE methods occurred in coastal areas where data have large spatial variations and a log-bimodal distribution instead of log-normal distribution.

Suhung, Shen↗

Adaptive Ensemble Refinement of Protein Structures in High Resolution Electron Microscopy Density Maps with Radical Augmented Molecular Dynamics Flexible Fitting

Recent advances in cryo-electron microscopy (cryo-EM) have enabled modeling macromolecular complexes that are essential components of the cellular machinery. The density maps derived from cryo-EM experiments are often integrated with manual, knowledge or artificial intelligence driven, and physics-guided computational methods to build, fit, and refine molecular structures. Going beyond a single stationary- structure determination scheme, it is becoming more common to interpret the experimental data with an ensemble of models, which contributes to an average observation. Hence, there is a need to decide on the quality of an ensemble of protein structures on-the-fly, while refining them against the density maps. Here, we introduce such an adaptive decision making scheme during the molecular dynamics flexible fitting (MDFF) of biomolecules. Using RADICAL-Cybertools, and the new RADICAL augmented MDFF implementation (R-MDFF) is examined in high-performance computing environments for refinement of two protein systems, Adenylate Kinase and Carbon Monoxide Dehydrogenase. For the test cases, use of multiple replicas in flexible fitting with adaptive decision making in R-MDFF improves the overall correlation to the density by 40% relative to the refinements of the brute-force MDFF. The improvements are particularly significant at high, 2 - 3 Å, map resolutions. More importantly, the ensemble model captures key features of biologically relevant molecular dynamics that is inaccessible to a single-model interpretation. Finally, the pipeline is applicable to systems of growing sizes, which is demonstrated using ensemble refinement of capsid proteins from Chimpanzee adenovirus. The overhead for decision making remaining low and robust to computing environments. The software is publicly available on GitHub and includes a short user guide to install the R-MDFF on different computing environments, from local Linux based workstations to High Performance Computing (HPC) environments.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Wellbore and groundwater temperature distribution eastern Snake River Plain, Idaho: Implications for groundwater flow and geothermal potential

A map of groundwater temperatures from the Eastern Snake River Plain (ESRP) regional aquifer can be used to identify and interpret important features of the aquifer, including aquifer flow direction, aquifer thickness, and potential geothermal anomalies. The ESRP is an area of high heat flow, yet most of this thermal energy fails to reach the surface, due to the heat being swept downgradient by the aquifer to the major spring complexes near Thousand Springs, ID, a distance of 300 km. Nine deep boreholes that fully penetrate the regional aquifer display three common features: (1) high thermal gradients beneath the aquifer, corresponding to high conductive heat flow in low-permeability hydrothermally-altered rocks; (2) isothermal temperature profiles within the aquifer, characteristic of an actively flowing groundwater; and (3) moderate thermal gradients in the vadose zone with values that indicate that over half of the geothermal heat flow is removed by advective transport in the regional aquifer system. This study utilized temperature data from 250 ESRP aquifer wells to evaluate regional aquifer flow direction, aquifer thickness, and potential geothermal anomalies. Because the thermal gradients are typically low in the aquifer, any measurement of groundwater temperature is a reasonable estimate of temperature throughout the aquifer thickness, allowing the construction of a regional aquifer temperature map for the ESRP. Mapped temperatures are used to identify cold thermal plumes associated with recharge from tributary valleys and adjacent uplands, and warm zones associated with geothermal input to the aquifer. Warm zones in the aquifer can have various causes, including local circulation of groundwater through the deep conductively dominated region, slow groundwater movement in low-permeability regions, or localized heat flow from deeper thermal features.

15 GEOTHERMAL ENERGY↗

Local Strain and Polarization Mapping in Ferrielectric Materials

CuInP 2 S 6 (CIPS) is a van der Waals material that has attracted attention because of its unusual properties. Recently, a combination of density functional theory (DFT) calculations and piezoresponse force microscopy (PFM) showed that CIPS is a uniaxial quadruple-well ferrielectric featuring two polar phases and a total of four polarization states that can be controlled by external strain. In this study, we combine DFT and PFM to investigate the stress-dependent piezoelectric properties of CIPS, which have so far remained unexplored. The two different polarization phases are predicted to differ in their mechanical properties and the stress sensitivity of their piezoelectric constants. This knowledge is applied to the interpretation of ferroelectric domain images, which enables investigation of local strain and stress distributions. The interplay of theory and experiment produces polarization maps and layer spacings which we compare to macroscopic X-ray measurements. We found that the sample contains only the low-polarization phase and that domains of one polarization orientation are strained, whereas domains of the opposite polarization direction are fully relaxed. The described nanoscale imaging methodology is applicable to any material for which the relationship between electromechanical and mechanical characteristics is known, providing insight on structural, mechanical, and electromechanical properties down to ~10 nm length scales.

36 MATERIALS SCIENCE↗

Sparse Reconstruction of the Merging A520 Cluster System

Merging galaxy clusters present a unique opportunity to study the properties of dark matter in an astrophysical context. These are rare and extreme cosmic events in which the bulk of the baryonic matter becomes displaced from the dark matter halos of the colliding subclusters. Since all mass bends light, weak gravitational lensing is a primary tool to study the total mass distribution in such systems. Combined with X-ray and optical analyses, mass maps of cluster mergers reconstructed from weak-lensing observations have been used to constrain the self-interaction cross-section of dark matter. The dynamically complex Abell 520 (A520) cluster is an exceptional case, even among merging systems: multi-wavelength observations have revealed a surprising high mass-to-light concentration of dark mass, the interpretation of which is difficult under the standard assumption of effectively collisionless dark matter. We revisit A520 using a new sparsity-based mass-mapping algorithm to independently assess the presence of the puzzling dark core. We obtain high-resolution mass reconstructions from two separate galaxy shape catalogs derived from Hubble Space Telescope observations of the system. Our mass maps agree well overall with the results of previous studies, but we find important differences. In particular, although we are able to identify the dark core at a certain level in both data sets, it is at much lower significance than has been reported before using the same data. As we cannot confirm the detection in our analysis, we do not consider A520 as posing a significant challenge to the collisionless dark matter scenario.

79 ASTRONOMY AND ASTROPHYSICS↗

Interdisciplinary applications and interpretations of ERTS data within the Susquehanna River Basin; resources inventory, land use and pollution

The author has identified the following significant results. Identification and mapping of three major kinds of coal refuse targets based on spectral signatures in channels four through seven of the ERTS-1 MSS were conducted. Correlation of the placement of the coal refuse targets with an existing map of their location was accomplished. Digital processing of ERTS-1 data permitted identification of stripped areas including ones that are not discernible by visual analysis of ERTS imagery. Combined visual and digital techniques of analyzing ERTS-1 data for geologic formations have been tried on selected areas of Pennsylvania. Mapping of two major agriculture counties to show land forms, drainage patterns, water, and urban areas were made using positive transparencies of MSS data. Two frames of the same central Pennsylvania area were brought into registration by translation and then merged even though the frames were obtained 71 days apart.

Mcmurtry, G. J.↗

Interpretation of land use and stream order, Pawnee River Basin, Kansas

The author has identified the following significant results. Land use and stream orders were mapped from ERTS-1 imagery covering the Pawnee River Basin. Total area of the basin, irrigated dry land crop area, and rangeland area were determined. The stream order of the basin was calculated by the Strahler method and provided more detail than is available on the comparable 1:250,000 sheets. This study has demonstrated the feasibility of using ERTS-1 imagery to map stream networks in greater detail than is required for 1:250,000 scale. The utility of ERTS-1 has also been demonstrated for mapping and mensuration of data relating to performance of ground cover types and the extent of irrigation.

Morain, S. A.↗

The reduction of remote sensing data by visual means

Issues likely to be of concern to educators called upon to teach courses involving the reduction (interpretation) of remotely sensed data by visual means are considered. Topics covered include: (1) information requirements of those using remotely-sensed data; (2) educational concepts involved in teaching students how to generate the desired information from a visual analysis of the data; (3) principles and techniques specific to the photointerpretation process; (4) concepts involved in the making of photographic measurements, as dictated by the geometry of remote sensing imagery; (5) the nature of the various kinds of mapping, plotting, and photointerpretation equipment; and (6) some special considerations with respect to the convergence of evidence and other principles involved in the interpretation of photographs. A recommended procedure for determining the usefulness of any given type of aerial or space photography in relation to the inventory of natural resources is included.

Colwell, R. N.↗

Multistage, multiseasonal and multiband imagery to identify and qualify non-forest vegetation resources

A description of space and supporting aircraft photography for the interpretation and analyses of non-forest (shrubby and herbaceous) native vegetation is presented. The research includes the development of a multiple sampling technique to assign quantitative area values of specific plant community types included within an assigned space photograph map unit. Also, investigations of aerial film type, scale, and season of photography for identification and quantity measures of shrubby and herbaceous vegetation were conducted. Some work was done to develop automated interpretation techniques with film image density measurement devices.

Driscoll, R. S.↗

Five-Year Wilkinson Microwave Anisotropy Probe (WMAP) Observations: Likelihoods and Parameters from the WMAP Data

The Wilkinson Microwave Anisotropy Probe (WMAP), launched in 2001, has mapped out the Cosmic Microwave Background with unprecedented accuracy over the whole sky. Its observations have led to the establishment of a simple concordance cosmological model for the contents and evolution of the universe, consistent with virtually all other astronomical measurements. The WMAP first-year and three-year data have allowed us to place strong constraints on the parameters describing the ACDM model. a flat universe filled with baryons, cold dark matter, neutrinos. and a cosmological constant. with initial fluctuations described by nearly scale-invariant power law fluctuations, as well as placing limits on extensions to this simple model (Spergel et al. 2003. 2007). With all-sky measurements of the polarization anisotropy (Kogut et al. 2003; Page et al. 2007), two orders of magnitude smaller than the intensity fluctuations. WMAP has not only given us an additional picture of the universe as it transitioned from ionized to neutral at redshift z approx.1100. but also an observation of the later reionization of the universe by the first stars. In this paper we present cosmological constraints from WMAP alone. for both the ACDM model and a set of possible extensions. We also consider tlle consistency of WMAP constraints with other recent astronomical observations. This is one of seven five-year WMAP papers. Hinshaw et al. (2008) describe the data processing and basic results. Hill et al. (2008) present new beam models arid window functions, Gold et al. (2008) describe the emission from Galactic foregrounds, and Wright et al. (2008) the emission from extra-Galactic point sources. The angular power spectra are described in Nolta et al. (2008), and Komatsu et al. (2008) present and interpret cosmological constraints based on combining WMAP with other data. WMAP observations are used to produce full-sky maps of the CMB in five frequency bands centered at 23, 33, 41, 61, and 94 GHz (Hinshaw et al. 2008). With five years of data, we are now able to place better limits on the ACDM model. as well as to move beyond it to test the composition of the universe. details of reionization. sub-dominant components, characteristics of inflation, and primordial fluctuations. We have more than doubled the amount of polarized data used for cosmological analysis. allowing a better measure of the large-scale E-mode signal (Nolta et al. 2008). To this end we describe an alternative way to remove Galactic foregrounds from low resolution polarization maps in which Galactic emission is marginalized over, providing a cross-check of our results. With longer integration we also better probe the second and third acoustic peaks in the temperature angular power spectrum, and have many more year-to-year difference maps available for cross-checking systematic effects (Hinshaw et al. 2008).

Dunkey, J.↗

Serenitatis multi-ringed basin - Regional geology and basin ring interpretation

New topographic data allow a reassessment of the ring structure and distribution of facies of the Serenitatis basin (SB) and correlation with the younger and essentially same-size Orientale basin. Three major rings of the main (southern) SB are mapped: the Linne ring, outlined by mare ridges, average diameter 420 km; the Haemus ring, outlined by basin-facing scarps and massifs with crenulated borders, 610 km; and the Vitruvius ring, outlined by basin-facing linear scarps and massifs, 880 km. The second ring is interpreted as the rim of the transient cavity, while Serenitatis ejecta should be present in significant amounts at the junction of the Serenitatis and Imbrium third rings. The new reconstruction indicates that portions of the SB are better preserved than previously thought, consistent with recent stratigraphic and sample studies that suggest an age (as young as 3.87 plus or minus 0.04 b.y.) for SB which is older than, but close to, the time of formation of the Imbrium basin.

Head, J. W., III↗

Radiation image reconstruction and uncertainty quantification using a Gaussian process prior

We propose a complete framework for Bayesian image reconstruction and uncertainty quantification based on a Gaussian process prior (GPP) to overcome limitations of maximum likelihood expectation maximization (ML-EM) image reconstruction algorithm. The prior distribution is constructed with a zero-mean Gaussian process (GP) with a choice of a covariance function, and a link function is used to map the Gaussian process to an image. Unlike many other maximum a posteriori approaches, our method offers highly interpretable hyperparamters that are selected automatically with the empirical Bayes method. Furthermore, the GP covariance function can be modified to incorporate a priori structural priors, enabling multi-modality imaging or contextual data fusion. Lastly, we illustrate that our approach lends itself to Bayesian uncertainty quantification techniques, such as the preconditioned Crank–Nicolson method and the Laplace approximation. The proposed framework is general and can be employed in most radiation image reconstruction problems, and we demonstrate it with simulated free-moving single detector radiation source imaging scenarios. We compare the reconstruction results from GPP and ML-EM, and show that the proposed method can significantly improve the image quality over ML-EM, all the while providing greater understanding of the source distribution via the uncertainty quantification capability. Furthermore, significant improvement of the image quality by incorporating a structural prior is illustrated.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

In-Field Whole-Plant Maize Architecture Characterized by Subcanopy Rovers and Latent Space Phenotyping

Core Ideas * Subcanopy rovers enabled 3D characterization of thousands of hybrid maize plots. * Machine learning produces heritable latent traits that describe plant architecture. * Rover-based phenotyping is far more efficient than manual phenotyping. * Latent phenotypes from rovers are ready for application to plant biology and breeding. Collecting useful, interpretable, and biologically relevant phenotypes in a resource-efficient manner is a bottleneck to plant breeding, genetic mapping, and genomic prediction. Autonomous and affordable subcanopy rovers are an efficient and scalable way to generate sensor-based datasets of in-field crop plants. Rovers equipped with lidar can produce three-dimensional reconstructions of entire hybrid maize (Zea mays L.) fields. In this study, we collected 2103 lidar scans of hybrid maize field plots and extracted phenotypic data from them by latent space phenotyping. We performed latent space phenotyping by two methods, principal component analysis and a convolutional autoencoder, to extract meaningful, quantitative latent space phenotypes (LSPs) describing whole-plant architecture and biomass distribution. The LSPs had heritabilities of up to 0.44, similar to some manually measured traits, indicating that they can be selected on or genetically mapped. Manually measured traits can be successfully predicted by using LSPs as explanatory variables in partial least squares regression, indicating that the LSPs contain biologically relevant information about plant architecture. These techniques can be used to assess crop architecture at a reduced cost and in an automated fashion for breeding, research, or extension purposes, as well as to create or inform crop growth models.

59 BASIC BIOLOGICAL SCIENCES↗

CHANGE OF MAGNETIC FIELD-GAS ALIGNMENT AT THE GRAVITY-DRIVEN ALFVÉNIC TRANSITION IN MOLECULAR CLOUDS: IMPLICATIONS FOR DUST POLARIZATION OBSERVATIONS

Diffuse striations in molecular clouds are preferentially aligned with local magnetic fields, whereas dense filaments tend to be perpendicular to them. When and why this transition occurs remain uncertain. To explore the physics behind this transition, we compute the histogram of relative orientation (HRO) between the density gradient and the magnetic field in three-dimensional magnetohydrodynamic (MHD) simulations of prestellar core formation in shock-compressed regions within giant molecular clouds. We find that, in the magnetically dominated (sub-Alfvénic) post-shock region, the gas structure is preferentially aligned with the local magnetic field. For overdense sub-regions with super-Alfvénic gas, their elongation becomes preferentially perpendicular to the local magnetic field. The transition occurs when self-gravitating gas gains enough kinetic energy from the gravitational acceleration to overcome the magnetic support against the cross-field contraction, which results in a power-law increase of the field strength with density. Similar results can be drawn from HROs in projected two-dimensional maps with integrated column densities and synthetic polarized dust emission. We quantitatively analyze our simulated polarization properties, and interpret the reduced polarization fraction at high column densities as the result of increased distortion of magnetic field directions in trans- or super-Alfvénic gas. Furthermore, we introduce measures of the inclination and tangledness of the magnetic field along the line of sight as the controlling factors of the polarization fraction. Observations of the polarization fraction and angle dispersion can therefore be utilized in studying local magnetic field morphology in star-forming regions.

79 ASTRONOMY AND ASTROPHYSICS↗