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This document proposes a specification for what the content of an image metadata database should be, how it should be managed, how it could be implemented, and how it might be extended. A phased strategy for bringing it to production is also proposed.
MerCat is a parallel, highly scalable and modular property software package for robust analysis of features in next-generation sequencing data. MerCat inputs include assembled contigs and raw sequence reads from any platform resulting in feature abundance counts tables. MerCat allows for direct analysis of data properties without reference sequence database dependency commonly used by search tools such as BLAST and/or DIAMOND for compositional analysis of whole community shotgun sequencing (e.g. metagenomes and metatranscriptomes).
This submission contains cleaned and filtered data from the Environmental Protection Agency Clean Air Markets CAM database of thermal power plant operation and performance.
In response to a user request, a computer generates a graphical user interface on a computer display. A schema information region of the graphical user interface includes multiple operand names, each operand name associated with one or more fields of a multi-dimensional database. A data visualization region of the graphical user interface includes multiple shelves. Upon detecting a user selection of the operand names and a user request to associate each user-selected operand name with a respective shelf in the data visualization region, the computer generates a visual table in the data visualization region in accordance with the associations between the operand names and the corresponding shelves. The visual table includes a plurality of panes, each pane having at least one axis defined based on data for the fields associated with a respective operand name.
This poster introduces the Department of Energy (DOE) Human Subjects Research Database (HSRD), which contains information on all Department of Energy research projects involving human subjects that: are funded by DOE; are conducted in DOE facilities; are performed by DOE personnel; include current or former DOE or contract personnel.
Generalized and quantitative relationships between flow and ecology are pivotal to developing environmental flow standards based on socially acceptable ecological conditions. Informing management at regional scales requires compiling sufficient hydrologic and ecological sources of information, identifying information gaps, and creating a framework for hypothesis development and testing. We compiled studies of empirical and theoretical relationships between flow and ecology in the South Atlantic region (SAR) of the United States to evaluate their utility for the development of environmental flow standards. Using database searches, internet searches, and agency contacts, we gathered 186 sources of information that provided a qualitative or quantitative relationship between flow and ecology within states encompassing the SAR. A total of 109 of the 186 sources had sufficient information to support quantitative analyses. Ecological responses to natural changes in flow magnitude, frequency, and duration were highly variable regardless of the direction and magnitude of changes in flow. In contrast, the majority of ecological responses to anthropogenic-induced flow alterations were negative. Fish consistently showed negative responses to anthropogenic flow alterations whereas other ecological groups showed somewhat variable responses (e.g. macroinvertebrates and riparian vegetation) and even positive responses (e.g. algae). Fish and organic matter had sufficient sample sizes to stratify natural flow-ecology relationships by specific flow categories (e.g. high flow, baseflows) or by region (e.g. coastal plain, uplands). After stratifying relationships, we found that significant correlations existed between changes in natural flow and ecological responses. In addition, a regression tree explained 57% of the variation in fish responses to anthropogenic and natural changes in flow. Because of some ambiguity in interpreting the directionality in ecological responses, we utilized ecological gains or losses, where each represents a benefit or reduction to ecosystem services, respectively. Variables explained 49% of the variation in ecological gains and losses for all ecological groups combined. Altogether, our results suggested that the source of flow change and the ecological group of interest played primary roles in determining the direction and magnitude of ecological responses. Furthermore, our results suggest that developing broadly generalized relationships between ecology and changes in flow at a regional scale is unlikely unless relationships are placed within meaningful contexts, such as environmental flow components or by geomorphic setting.
Tracking software usage is important for HPC centers, computer vendors, code developers and funding agencies to provide more efficient and targeted software support, and to forecast needs and guide HPC software effort towards the Exascale era. However, accurately tracking software usage on HPC systems has been a challenging task. In this paper, we present a tool called Automatic Library Tracking Database (ALTD) that has been developed and put in production on several Cray systems. The ALTD infrastructure prototype automatically and transparently stores information about libraries linked into an application at compilation time and also the executables launched in a batch job. We will illustrate the usage of libraries, compilers and third party software applications on a system managed by the National Institute for Computational Sciences.
In response to a user request, a computer generates a graphical user interface on a computer display. A schema information region of the graphical user interface includes multiple operand names, each operand name associated with one or more fields of a multi-dimensional database. A data visualization region of the graphical user interface includes multiple shelves. Upon detecting a user selection of the operand names and a user request to associate each user-selected operand name with a respective shelf in the data visualization region, the computer generates a visual table in the data visualization region in accordance with the associations between the operand names and the corresponding shelves. The visual table includes a plurality of panes, each pane having at least one axis defined based on data for the fields associated with a respective operand name.
4D is an integrated development platform - a single product comprised of the components you need to create and distribute professional applications. You get a graphical design environment, SQL database, a programming language, integrated PHP execution, HTTP server, application server, executable generator, and much more. 4D offers multi-platform development and deployment, meaning whatever you create on a Mac can be used on Windows, and vice-versa. Beyond productive development, 4D is renowned for its great flexibility in maintenance and modification of existing applications, and its extreme ease of implementation in its numerous deployment options. Your professional application can be put into production more quickly, at a lower cost, and will always be instantly scalable. 4D makes it easy, whether you're looking to create a classic desktop application, a client-server system, a distributed solution for Web or mobile clients - or all of the above!
A method and system in a computer system for dynamically providing a graphical representation of a data store of entries via a matrix interface is disclosed. A dynamic graph system provides a matrix interface that exposes to an application program a graphical representation of data stored in a data store such as a semantic database storing triples. To the application program, the matrix interface represents the graph as a sparse adjacency matrix that is stored in compressed form. Each entry of the data store is considered to represent a link between nodes of the graph. Each entry has a first field and a second field identifying the nodes connected by the link and a third field with a value for the link that connects the identified nodes. The first, second, and third fields represent the rows, column, and elements of the adjacency matrix.
A computer displays a graphical user interface on its display. The graphical user interface includes a schema information region and a data visualization region. The schema information region includes multiple operand names, each operand corresponding to one or more fields of a multi-dimensional database that includes at least one data hierarchy. The data visualization region includes a columns shelf and a rows shelf. The computer detects user actions to associate one or more first operands with the columns shelf and to associate one or more second operands with the rows shelf. The computer generates a visual table in the data visualization region in accordance with the user actions. The visual table includes one or more panes. Each pane has an x-axis defined based on data for the one or more first operands, and each pane has a y-axis defined based on data for the one or more second operands.
Experimental data on the isotopic concentrations in irradiated nuclear fuel represent one of the primary methods for validating computational methods and nuclear data used for reactor and spent fuel depletion simulations that support nuclear fuel cycle safety and safeguards programs. Measurement data have previously not been available to users in a centralized or searchable format, and the majority of accessible information has been, for the most part, limited to light-water-reactor designs. This paper describes a recent initiative to compile spent fuel benchmark data for additional reactor designs used throughout the world that can be used to validate computer model simulations that support nuclear energy and nuclear safeguards missions. Experimental benchmark data have been expanded to include VVER-440, VVER-1000, RBMK, graphite moderated MAGNOX, gas cooled AGR, and several heavy-water moderated CANDU reactor designs. Additional experimental data for pressurized light water and boiling water reactor fuels has also been compiled for modern assembly designs and more extensive isotopic measurements. These data are being compiled and uploaded to a recently revised structured and searchable database, SFCOMPO, to provide the nuclear analysis community with a centrally-accessible resource of spent fuel compositions that can be used to benchmark computer codes, models, and nuclear data. The current version of SFCOMPO contains data for eight reactor designs, 20 fuel assembly designs, more than 550 spent fuel samples, and measured isotopic data for about 80 nuclides.
This presentation provides updates on the work conducted for the Gearbox Reliability Collaborative on the gearbox reliability database, condition monitoring and operations and maintenance research.
This technical highlight describes NREL research to develop a publicly available database of energy retrofit measures containing performance characteristics and cost estimates for nearly 3,000 measures.
A computer displays a graphical user interface on its display. The graphical user interface includes a schema information region and a data visualization region. The schema information region includes a plurality of fields of a multi-dimensional database that includes at least one data hierarchy. The data visualization region includes a columns shelf and a rows shelf. The computer detects user actions to associate one or more first fields with the columns shelf and to associate one or more second fields with the rows shelf. The computer generates a visual table in the data visualization region in accordance with the user actions. The visual table includes one or more panes. Each pane has an x-axis defined based on data for the one or more first fields, and each pane has a y-axis defined based on data for the one or more second fields.
MyRedis is a product of the Lorenz subproject under the ASC Scirntific Data Management effort. MyRedis is a web based utility designed to allow easy administration of instances of Redis databases. It can be usedd to view and manipulate data as well as run commands directly against a variety of different Redis hosts.
A method and system in a computer system for dynamically providing a graphical representation of a data store of entries via a matrix interface is disclosed. A dynamic graph system provides a matrix interface that exposes to an application program a graphical representation of data stored in a data store such as a semantic database storing triples. To the application program, the matrix interface represents the graph as a sparse adjacency matrix that is stored in compressed form. Each entry of the data store is considered to represent a link between nodes of the graph. Each entry has a first field and a second field identifying the nodes connected by the link and a third field with a value for the link that connects the identified nodes. The first, second, and third fields represent the rows, column, and elements of the adjacency matrix.
The Geant4, GeantV and GENIE collaborations regularly perform validation and regression tests for simulation results. DoSSiER (Database of Scientific Simulation and Experimental Results) is being developed as a central repository to store the simulation results as well as the experimental data used for validation. DoSSiER can be easily accessed via a web application. In addition, a web service allows for programmatic access to the repository to extract records in json or xml exchange formats. In this paper, we describe the functionality and the current status of various components of DoSSiER as well as the technology choices we made.