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At least 793 records · Page 44

Active species delivered by dielectric barrier discharge filaments to bacteria biofilms on the surface of apple

The atmospheric pressure non-equilibrium plasma has shown a significant potential as a novel food decontamination technology. In this paper, we report a computational study of the intersection of negative streamer produced by air dielectric barrier discharge with bacteria biofilm on an apple surface. The structure, conductivities, and permittivities of bacteria biofilm have been considered in the Poisson's equations and transportation equations of charge and neutral species to realize self-consistent transportation of plasma between electrode and charging surfaces of apple. We find that the ionization near the biofilm facilitates the propagation of negative streamer when the streamer head is 1 mm from the biofilm. The structure of the biofilm results in the non-uniform distribution of ROS and RNS captured by flux and time fluence of these reactive species. The mean free path of charged species in μm scale permitted the plasma penetrate into the cavity of the biofilm, therefore, although the density of ROS and RNS decrease by 6–7 order of magnitude, the diffusion results in the uniform distribution of ROS and RNS inside the cavity during the pulse off period.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Non-adiabatic dynamics investigation of the radiationless decay mechanism of trans-urocanic acid in the S{sub 2} state

The trans-urocanic acid, a UV chromophore in the epidermis of human skin, was found to exhibit a wavelength dependent isomerization property. The isomerization quantum yield to cis-urocanic is greatest when being excited to the S{sub 1} state, whereas exciting the molecule to the S{sub 2} state causes almost no isomerization. The comparative photochemical behavior of the trans-urocanic on the S{sub 1} and S{sub 2} states continues to be the subject of intense research effort. This study is concerned with the unique photo-behavior of this interesting molecule on the S{sub 2} state. Combining the on-the-fly surface hopping dynamics simulations and static electronic structure calculations, three decay channels were observed following excitation to the S{sub 2} state. An overwhelming majority of the molecules decay to the S{sub 1} state through a planar or pucker characterized minimum energy conical intersection (MECI), and then decay to the ground state along a relaxation coordinate driven by a pucker deformation of the ring. A very small fraction of molecules decay to the S{sub 1} state by a MECI characterized by a twisting motion around the CC double bond, which continues to drive the molecule to deactivate to the ground state. The latter channel is related with the photoisomerization process, whereas the former one will only generate the original trans-form products. The present work provides a novel S{sub 2} state decay mechanism of this molecule, which offers useful information to explain the wavelength dependent isomerization behavior.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

In vivo visualization method by absolute blood flow velocity based on speckle and fringe pattern using two-beam multipoint laser Doppler velocimetry

Two-beam multipoint laser Doppler velocimetry (two-beam MLDV) is a non-invasive imaging technique able to provide an image of two-dimensional blood flow and has potential for observing cancer as previously demonstrated in a mouse model. In two-beam MLDV, the blood flow velocity can be estimated from red blood cells passing through a fringe pattern generated in the skin. The fringe pattern is created at the intersection of two beams in conventional LDV and two-beam MLDV. Being able to choose the depth position is an advantage of two-beam MLDV, and the position of a blood vessel can be identified in a three-dimensional space using this technique. Initially, we observed the fringe pattern in the skin, and the undeveloped or developed speckle pattern generated in a deeper position of the skin. The validity of the absolute velocity value detected by two-beam MLDV was verified while changing the number of layers of skin around a transparent flow channel. The absolute velocity value independent of direction was detected using the developed speckle pattern, which is created by the skin construct and two beams in the flow channel. Finally, we showed the relationship between the signal intensity and the fringe pattern, undeveloped speckle, or developed speckle pattern based on the skin depth. The Doppler signals were not detected at deeper positions in the skin, which qualitatively indicates the depth limit for two-beam MLDV.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

HSX as an example of a resilient non-resonant divertor

This study describes an initial description of the resilient divertor properties of quasi-symmetric (QS) stellarators using the HSX (Helically Symmetric eXperiment) configuration as a test-case. Divertors in high-performance QS stellarators will need to be resilient to changes in plasma configuration that arise due to evolution of plasma pressure profiles and bootstrap currents for divertor design. Resiliency is tested by examining the changes in strike point patterns from the field line following, which arise due to configurational changes. A low strike point variation with high configuration changes corresponds to high resiliency. The HSX edge displays resilient properties with configuration changes arising from the (1) wall position, (2) plasma current, and (3) external coils. The resilient behavior is lost if large edge islands intersect the wall structure. The resilient edge properties are corroborated by heat flux calculations from the fully 3-D plasma simulations using EMC3-EIRENE. Additionally, the strike point patterns are found to correspond to high curvature regions of magnetic flux surfaces.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Cathodoluminescence for the 21st century: Learning more from light

Cathodoluminescence (CL) is the emission of light from a material in response to excitation by incident electrons. The technique has had significant impact in the characterization of semiconductors, minerals, ceramics, and many nanostructured materials. Since 2010, there have been a number of innovative developments that have revolutionized and expanded the information that can be gained from CL and broadened the areas of application. While the primary historical application of CL was for spatial mapping of luminescence variations (e.g., imaging dark line defects in semiconductor lasers or providing high resolution imaging of compositional variations in geological materials), new ways to collect and analyze the emitted light have expanded the science impact of CL, particularly at the intersection of materials science and nanotechnology. Current developments include (1) angular and polarized CL, (2) advances in time resolved CL, (3) far-field and near-field transport imaging that enable drift and diffusion information to be obtained through real space imaging, (4) increasing use of statistical analyses for the study of grain boundaries and interfaces, (5) 3D CL including tomography and combined work utilizing dual beam systems with CL, and (6) combined STEM/CL measurements that are reaching new levels of resolution and advancing single photon spectroscopy. This focused review will first summarize the fundamentals and then briefly describe the state-of-the-art in conventional CL imaging and spectroscopy. We also review these recent novel experimental approaches that enable added insight and information, providing a range of examples from nanophotonics, photovoltaics, plasmonics, and studies of individual defects and grain boundaries.

14 SOLAR ENERGY↗

Analytical derivatives of the individual state energies in ensemble density functional theory method. I. General formalism

The state-averaged (SA) spin restricted ensemble referenced Kohn-Sham (REKS) method and its state interaction (SI) extension, SI-SA-REKS, enable one to describe correctly the shape of the ground and excited potential energy surfaces of molecules undergoing bond breaking/bond formation reactions including features such as conical intersections crucial for theoretical modeling of non-adiabatic reactions. Until recently, application of the SA-REKS and SI-SA-REKS methods to modeling the dynamics of such reactions was obstructed due to the lack of the analytical energy derivatives. Here, the analytical derivatives of the individual SA-REKS and SI-SA-REKS energies are derived. The final analytic gradient expressions are formulated entirely in terms of traces of matrix products and are presented in the form convenient for implementation in the traditional quantum chemical codes employing basis set expansions of the molecular orbitals. Finally, we will describe the implementation and benchmarking of the derived formalism in a subsequent article of this series.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Full-dimensional multi-state simulation of the photodissociation of thioanisole

The photodissociation of thioanisole is very interesting because the experiments of Lim and Kim provide evidence for mode-specific effects on the product distribution. They showed that, with a specific S–CH 3 stretching mode being excited as the reagent is excited to the S 1 electronic state, there is a sharp increase in the proportion of the ground-state product to the excited-state product. In this work, we report 78 011 full-dimensional semiclassical multi-state trajectories of the photodissociation process using the coherent switching with decay of mixing dynamics method. The potential surfaces and couplings are based on electronic structure calculations that include dynamic correlation through second order perturbation theory. We report results for four sets of initial conditions, one corresponding roughly to 0–0 excitation and three corresponding to exciting one vibrational mode, to look for mode-specific effects. The simulations show no significant mode-specific effect on the product energy distributions, but they do show an effect on the distribution of minimum-energy gaps in the trajectories and on the lifetime for dissociation. In particular, excitation of the S–CH 3 stretching mode leads to trajectories passing closer to the S 1 -S 2 conical intersection and to shorter lifetimes. This provides a possible explanation of why experimental results are different for excitation of this vibration

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

“Feathered” fractal surfaces to minimize secondary electron emission for a wide range of incident angles

Complex structures on a material surface can significantly reduce the total secondary electron emission from that surface. The reduction occurs due to the capture of low-energy, true secondary electrons emitted at one point of the structure and intersecting another. We performed Monte Carlo calculations to demonstrate that fractal surfaces can reduce net secondary electron emission produced by the surface as compared to the flat surface. Specifically, we describe one surface, a “feathered” surface, which reduces the secondary electron emission yield more effectively than other previously considered configurations. Specifically, feathers grown onto a surface suppress secondary electron emission from shallow angles of incidence more effectively than velvet. Here, we find that, for the surface simulated, secondary electron emission yield remains below 20% of its un-suppressed value, even for shallow incident angles, where the velvet-only surface gives reduction factor of only 50%.

36 MATERIALS SCIENCE↗

Memristive devices from ZnO nanowire bundles and meshes

Here, we report two types of memristive devices made of ZnO nanowire assemblies and Ag electrodes: nanowire-bundle and nanowire-mesh memristors. Although constructed with the same materials, these devices exhibit different characteristics. Nanowire-bundle memristors have small On/Off ratios and feature stable hysteresis under X-ray irradiation. Nanowire-mesh memristors show large On/Off ratios and multiple distinct states. We attribute the switching in bundle nanowires to the modification of the Schottky barrier by the mobile Ag ions and the stability of hysteresis to the ability of the bundles to retain Ag in the alleys between nanowires, as confirmed by first-principles calculations and energy dispersive x-ray measurements. For nanowire-mesh memristors, the high On/Off ratio leads us to attribute the switching mechanism to the formation and dissolution of Ag bridges in the nano-gaps at the intersections of nanowires.

42 ENGINEERING↗

Non-adiabatic quantum reactive scattering in hyperspherical coordinates

A new electronically non-adiabatic quantum reactive scattering methodology is presented based on a time-independent coupled channel formalism and the adiabatically adjusting principal axis hyperspherical coordinates of Pack and Parker [J. Chem. Phys. 87, 3888 (1987)]. The methodology computes the full state-to-state scattering matrix for A + B 2 (v, j) ↔ AB(v', j') + B and A + AB(v, j) → A + AB(v', j') reactions that involve two coupled electronic states which exhibit a conical intersection. The methodology accurately treats all six degrees of freedom relative to the center-of-mass which includes non-zero total angular momentum J and identical particle exchange symmetry. The new methodology is applied to the ultracold hydrogen exchange reaction for which large geometric phase effects have been recently reported [B. K. Kendrick et al., Phys. Rev. Lett. 115, 153201 (2015)]. Rate coefficients for the H/D + HD(v = 4, j = 0) → H/D + HD(v', j') reactions are reported for collision energies between 1 μK and 100 K (total energy ≈1.9 eV). A new diabatic potential energy matrix is developed based on the Boothroyd, Keogh, Martin, and Peterson (BKMP2) and double many body expansion plus single-polynomial (DSP) adiabatic potential energy surfaces for the ground and first excited electronic states of H 3 , respectively. The rate coefficients computed using the new non-adiabatic methodology and diabatic potential matrix reproduce the recently reported rates that include the geometric phase and are computed using a single adiabatic ground electronic state potential energy surface (BKMP2). The dramatic enhancement and suppression of the ultracold rates due to the geometric phase are confirmed as well as its effects on several shape resonances near 1 K. In conclusion, the results reported here represent the first fully non-adiabatic quantum reactive scattering calculation for an ultracold reaction and validate the importance of the geometric phase on the Wigner threshold behavior.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Excited state non-adiabatic dynamics of the smallest polyene, trans 1,3-butadiene. I. Time-resolved photoelectron-photoion coincidence spectroscopy

The ultrafast excited state dynamics of the smallest polyene, trans-1,3-butadiene, were studied by femtosecond time-resolved photoelectron-photoion coincidence (TRPEPICO) spectroscopy. The evolution of the excited state wavepacket, created by pumping the bright 1 B u (ππ*) electronic state at its origin of 216 nm, is projected via one- and two-photon ionization at 267 nm onto several ionization continua. The results are interpreted in terms of Koopmans’ correlations and Franck-Condon factors for the excited and cationic states involved. The known predissociative character of the cation excited states is utilized to assign photoelectron bands to specific continua using TRPEPICO spectroscopy. This permits us to report the direct observation of the famously elusive S 1 (2 1 A g ) dark electronic state during the internal conversion of trans 1,3-butadiene. Our phenomenological analysis permits the spectroscopic determination of several important time constants. We report the overall decay lifetimes of the 1 1 B u and 2 1 A g states and observe the re-appearance of the hot ground state molecule. We argue that the apparent dephasing time of the S 2 (1 1 B u ) state, which leads to the extreme breadth of the absorption spectrum, is principally due to large amplitude torsional motion on the 1 B u surface in conjunction with strong non-adiabatic couplings via conical intersections, whereupon nuclear wavepacket revivals to the initial Franck-Condon region become effectively impossible. Lastly, in Paper II [W. J. Glover et al., J. Chem. Phys. 148, 164303 (2018)], ab initio multiple spawning is used for on-the-fly computations of the excited state non-adiabatic wavepacket dynamics and their associated TRPEPICO observables, allowing for direct comparisons of experiment with theory.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Transient structured fluctuations in a two-dimensional system with multiple ordered phases

We report the structure of transient fluctuations in the liquid phase of a two-dimensional system that exhibits several ordered phases with different symmetries. The density-temperature phase diagram of the system studied, composed of particles with a repulsive shouldered soft-core pair interaction, has regions with stable liquid and hexatic phases, a square solid phase, two separate hexagonal solid phases, and a quasi-crystalline phase with 12-fold symmetry. We have examined the character of the structured fluctuations by computing the same-time aperture cross correlation function of particle configurations in several fluid regions near to and far from phase transition lines. The two primary goals of our study are (1) determination if the spectrum of structures of the fluctuations in the liquid is broader than or limited to the motifs exhibited by the ordered phases supported by the system and (2) determination of the density domains in the liquid that support particular transient structured fluctuations. In the system studied, along a low-temperature isotherm in the temperature-density plane that intersects all the ordered phases we find that the liquid phase exhibits structured fluctuations with hexagonal symmetry near both liquid-hexatic transition lines. Along the same isotherm and in the stable liquid between the lower density hexatic-to-liquid and the higher density liquid-to-square solid transitions, we find that transient hexagonal ordered fluctuations dominate the liquid region near the hexatic-to-liquid transition and square ordered fluctuations dominate the liquid region near the liquid-to square solid transition, but both of these structured fluctuations occur at all densities between these transition lines. At a higher temperature, at phase points in the liquid above, but close to the density maximum of an underlying transition, there are ordered fluctuations that can be correlated with the structure of the lower temperature phase. Although it is expected that very close to a liquid-ordered phase boundary a structured fluctuation in the liquid will have the same symmetry as the ordered phase, it is not obvious that structured fluctuations in thermodynamic states deep in the liquid phase will be similarly restricted. The most striking result of our calculations is that no evidence is found in the liquid phase for structured fluctuations with other symmetries than those of the ordered phases of the system.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Understanding the unique sorption of alkane- α , ω -diols in silicalite-1

Adsorption equilibria of alkane-α, ω-diols (propane-1,3-diol, butane-1,4-diol, pentane-1,5-diol, and hexane-1,6-diol) from aqueous solution onto an all-silica zeolite of the type mordenite framework inverted (MFI, also known as silicalite-1) are obtained by simulations and experiments at T = 323 K and also for pentane-1,5-diol (C5) at 348 and 383 K. After an initial slow rise, isotherms at T = 323 K exhibit steep changes in loading, reaching saturation at 10, 9, 8, and 7 molec/uc as the number of carbon atoms of the diols increases from 3 to 6. The abrupt change in loading corresponds to a minimum in the free energy of adsorption (from vapor to zeolite) that is associated with a rapid rise in the number of hydrogen bonds per sorbate molecule due to the formation of large clusters. For C5 at low loading, the centers-of-mass primarily occupy the channel intersections with oxygens oriented along the straight channels where intermolecular hydrogen bonds are formed. At saturation loading, the C5 centers-of-mass instead occupy the straight and zig-zag channels, and nearly all C5 molecules are involved in a percolating hydrogen-bonding network (this also occurs for C6). With increasing temperature, the C5 isotherm decreases in steepness as the minimum in free energy of adsorption decreases in depth and a less-ordered structure of the adsorbed molecules results in a lower number of diol–diol hydrogen bonds. However, the C5 isotherm does not shift significantly in concentration of the adsorption onset, as the free energies of solvation and adsorption increase by similar and compensating amounts. At T = 323 and 348 K, the steep change for the C5 adsorption isotherm is found to be a phase transition (as indicated by a bimodal distribution of unit cell occupancies at intermediate loading) from a less-dense phase with only small hydrogen-bonded clusters to an ordered solid phase with loadings of 8 molec/uc. At T = 383 K, the sorbates are less ordered, the distribution of occupancies becomes unimodal at intermediate loading, and the loading rises more gradually with concentration. Lastly, several different enhanced sampling methods are utilized for these simulations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Permutation invariant polynomial neural network approach to fitting potential energy surfaces. IV. Coupled diabatic potential energy matrices

A machine learning method is proposed for representing the elements of diabatic potential energy matrices (PEMs) with high fidelity. This is an extension of the so-called permutation invariant polynomial-neural network (PIP-NN) method for representing adiabatic potential energy surfaces. While for one-dimensional irreducible representations the diagonal elements of a diabatic PEM are invariant under exchange of identical nuclei in a molecular system, the off-diagonal elements require special symmetry consideration, particularly in the presence of a conical intersection. A multiplicative factor is introduced to take into consideration the particular symmetry properties while maintaining the PIP-NN framework. Here, we demonstrate here that the extended PIP-NN approach is accurate in representing diabatic PEMs, as evidenced by small fitting errors and by the reproduction of absorption spectra and product branching ratios in both H 2 O$(\tilde{X} / \tilde{B})$ and NH 3 $(\tilde{X} $/Ã) non-adiabatic photodissociation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Ultrafast photodissociation dynamics and nonadiabatic coupling between excited electronic states of methanol probed by time-resolved photoelectron spectroscopy

The electronic and nuclear dynamics in methanol, following 156 nm photoexcitation, are investigated by combining a detailed analysis of time-resolved photoelectron spectroscopy experiments with electronic structure calculations. The photoexcitation pump pulse is followed by a delayed 260 nm photoionization probe pulse to produce photoelectrons that are analyzed by velocity map imaging. The yields of mass-resolved ions, measured with similar experimental conditions, are found to exhibit the same time-dependence as specific photoelectron spectral features. Energy-resolved signal onset and decay times are extracted from the measured photoelectron spectra to achieve high temporal resolution, beyond the 20 fs pump and probe pulse durations. When combined with ab initio calculations of selected cuts through the excited state potential energy surfaces, this information allows the dynamics of the transient excited molecule, which exhibits multiple nuclear and electronic degrees of freedom, to be tracked on its intrinsic few-femtosecond time scale. Within 15 fs of photoexcitation, we observe nuclear motion on the initially bound photoexcited 2 1 A" (S 2 ) electronic state, through a conical intersection with the 1 1 A' (S3) state, which reveals paths to photodissociation following C–O stretch and C–O–H angle opening.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Design of a new turbulent dynamo experiment on the OMEGA-EP

Turbulent dynamos that exponentially amplify initially small, seed magnetic fields are crucial in magnetizing the Galaxy and beyond. Until now, the ideal environment for turbulent dynamos to grow has been difficult to recreate. In a new approach, we leverage the long pulse capability of the OMEGA-EP laser to recreate the highly conductive and inviscid (Rem∼5500, Prm≳1) growth environment of the turbulent dynamo within the magnetized plasma jet ablated from a simple cone target of CH plastic. In 3-D FLASH simulations of our scheme, we find that the ideal dynamo environment is a typically ∼1 mm3, ≳1.5 keV hot spot where the laser beams intersect to produce maximum direct heating of the jet plasma. The dynamo environment is maintained from the onset of steady flows through the ∼10 ns length of the laser pulse. For a plasma vorticity of 0.3–3.0 ns–1 and a dynamo active over ∼5 ns, the magnetic energy increases on an exponential trajectory by more than a decade. Fourier analysis reveals that the dynamo progressively saturates up to EB/EK∼20% from small scales k≳30 cm−1 to large in the time it is sustained. We find robust agreement between the evolution of magnetic energy spectra extracted from the FLASH physics simulation and that derived from synthetic sheath-accelerated proton deflectometry images, thereby demonstrating that the dynamo activity can be quantified in a real experiment.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Theory of Alfvén-slow frequency gaps and discovery of Alfvén-slow eigenmodes in tokamaks

An analytical theory based on the MHD model is presented for understanding the coupling between the shear Alfvén wave and the slow magnetosonic wave (or the so called slow mode) in the frequency range below the Toroidal Alfvén Eigenmode (TAE) continuum spectrum gap. In tokamak plasmas, coupling of the Alfvén m poloidal harmonic and the slow mode m ± 1 harmonics causes the Alfvén m harmonic continuous spectrum to be uplifted from the uncoupled Alfvén spectrum by an amount related to the plasma pressure and the geodesic magnetic field curvature. However, the frequency of one of the slow mode m ± 1 harmonics is reduced by the same pressure-curvature coupling effect. But the frequency of the other slow mode harmonic is relatively unaffected. As a result, the Alfvén-slow (AS) mode continuous spectrum is broken up into two Alfvén-Slow (AS) gaps below the TAE continuum gap. Coupling of the Alfvén m harmonic with the slow mode m ± 2 harmonics also creates additional AS gaps if their frequencies cross each other. The AS gap widths increase with the plasma pressure. The creation of AS gaps allows the existence of several new types of Alfvén-Slow Eigenmodes (ASEs). The radial structure of these new ASEs does not intersect with the continuous spectrum and thus does not suffer from continuum damping. The Beta-induced Alfvén-Acoustic Eigenmode (BAAE) is one type of ASEs with frequency in the lowest AS frequency gap. However, the BAAE usually interacts with the Alfvén-Slow continuum and suffers from continuum damping. The existence of ASEs is ubiquitous for normal and reserve safety factor profiles, broad range of plasma β values, different plasma shapes, and many different toroidal mode numbers. The newly discovered ASEs provide explanation for the experimentally observed Beta-induced Alfvén Eigenmodes destabilized by fast ions with frequencies below the TAE frequency gap.

Cheng, C. Z. (ORCID:0000000166187806)↗

Extreme nonlinear dynamics in vacuum laser acceleration with a crossed beam configuration

A relatively simple model problem where a single electron moves in two relativistically strong obliquely intersecting plane wave-packets is studied using a number of different numerical solvers. It is shown that, in general, even the most advanced solvers are unable to obtain converged solutions for more than about 100 fs in contrast to the single plane wave problem, and that some basic metrics of the orbit show enormous sensitivity to the initial conditions. Finally, at a bare minimum, this indicates an unusual degree of nonlinearity, and may well indicate that the dynamics of this system are chaotic.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗