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At least 793 records · Page 44

Generalized minimum shift-keying modulation techniques

The simultaneous data demodulation and phase tracking of an MSK signal using the Viterbi algorithm is described and two variations of MSK modulation are studied. The MSK with overlay is a dual rate modulation technique where low-and high-rate data are superimposed on an MSK signal. Here the demodulator uses the Viterbi algorithm to estimate both the low-and high-rate data simultaneously. The MSK with pseudorandom sequence spreading combats intentional or unintentional jamming. A simplified receiver for these spread spectrum MSK signals is found, which takes into consideration the effect of random phase perturbations. The performance of these demodulators is evaluated using transfer function bounds for the bit error probability. It is shown that with a reasonable short overlay period, at a relatively high signal-to-noise ratio (13 dB), there is a small (0.7 dB) loss of performance. For demodulation of the spread spectrum MSK signal, a simplified receiver is derived, and its performance in the presence of continuous jamming is evaluated.

Sadr, Ramin↗

A spectrophotometric study of IR Gem at outburst and quiescence

Optical spectra with 2.5-A resolution obtained throughout the orbit of IR Gem during a five-day sequence beginning at an outburst state and ending at quiescence are compared with B magnitude and IUE spectra obtained throughout other quiescent-state orbits. No obvious second component is found in the emission lines. In contrast to previous results, little high-excitation He II 4686-A emission is noted, and no variation of the equivalent widths of the Balmer emission is found over the orbital cycle. The results suggest that large changes in the excitation level and in the modulation from a heated zone can take place during different quiescent states, possibly due to the interoutburst phase.

Feinswog, Laurie↗

Exhaust Nozzle for a Multitube Detonative Combustion Engine

An improved type of exhaust nozzle has been invented to help optimize the performances of multitube detonative combustion engines. The invention is applicable to both air-breathing and rocket engines used to propel some aircraft and spacecraft, respectively. In a detonative combustion engine, thrust is generated through the expulsion of combustion products from a detonation process in which combustion takes place in a reaction zone coupled to a shock wave. The combustion releases energy to sustain the shock wave, while the shock wave enhances the combustion in the reaction zone. The coupled shockwave/reaction zone, commonly referred to as a detonation, propagates through the reactants at very high speed . typically of the order of several thousands of feet per second (of the order of 1 km/s). The very high speed of the detonation forces combustion to occur very rapidly, thereby contributing to high thermodynamic efficiency. A detonative combustion engine of the type to which the present invention applies includes multiple parallel cylindrical combustion tubes, each closed at the front end and open at the rear end. Each tube is filled with a fuel/oxidizer mixture, and then a detonation wave is initiated at the closed end. The wave propagates rapidly through the fuel/oxidizer mixture, producing very high pressure due to the rapid combustion. The high pressure acting on the closed end of the tube contributes to forward thrust. When the detonation wave reaches the open end of the tube, it produces a blast wave, behind which the high-pressure combustion products are expelled from the tube. The process of filling each combustion tube with a detonable fuel/oxidizer mixture and then producing a detonation repeated rapidly to obtain repeated pulses of thrust. Moreover, the multiple combustion tubes are filled and fired in a repeating sequence. Hence, the pressure at the outlet of each combustion tube varies cyclically. A nozzle of the present invention channels the expansion of the pulsed combustion gases from the multiple combustion tubes into a common exhaust stream, in such a manner as to enhance performance in two ways: (1) It reduces the cyclic variations of pressure at the outlets of the combustion tubes so as to keep the pressure approximately constant near the optimum level needed for filling the tubes, regardless of atmospheric pressure at the altitude of operation; and (2) It maximizes the transfer of momentum from the exhaust gas to the engine, thereby maximizing thrust. The figure depicts a typical engine equipped with a nozzle according to the invention. The nozzle includes an interface section comprising multiple intake ports that couple the outlets of the combustion tubes to a common plenum. Proceeding from its upstream to its downstream end, the interface section tapers to a larger cross-sectional area for flow. This taper fosters expansion of the exhaust gases flowing from the outlets of the combustion tubes and contributes to the desired equalization of exhaust combustion pressure. The cross-sectional area for flow in the common plenum is greater than, or at least equal to, the combined cross-sectional flow areas of the combustor tubes. In the common plenum, the exhaust streams from the individual combustion tubes mix to form a single compound subsonic exhaust stream. Downstream of the common plenum is the throat that tapers to a smaller flow cross section. In this throat, the exhaust gases become compressed to form a compound sonic gas stream. Downstream of the throat is an expansion section, which typically has a bell or a conical shape. (The expansion section can be truncated or even eliminated in the case of an air-breathing engine.) After entering the expansion section, the exhaust gases expand rapidly from compound sonic to compound supersonic speeds and are then vented to the environment. The basic invention admits of numerous variations. For example, the combustion tubes can be arranged around the central axin a symmetrical or asymmetrical pattern other than the one shown in the figure. For another example, the flow cross-sectional area(s) of one or more of the intake ports in the interface section, of the common plenum, the throat, and/or the expansion section can be varied, either symmetrically or asymmetrically, to adjust dynamics of the exhaust stream or to direct the thrust vector away from the central axis.

Bratkovich, Thomas E.↗

Concept of Operations for Interval Management Arrivals and Approach

This paper presents the concept of operations for interval management operations to be deployed in the US National Airspace System (NAS) by the Federal Aviation Administration (FAA) Interval Management Program. The arrivals and approach operations are explored in detail including the primary operation and variations. The use of interval management operations is described that begin in en route airspace and continue to a termination point inside the arrival terminal area in the highly automated terminal environment that includes other arrival management tools such as arrival metering, Ground-based Interval Management - Spacing (GIM-S), and Terminal Sequencing and Spacing (TSAS). The roles of Air Traffic and Pilots and the ground automation tools that are used by Air Traffic Controllers to enable the operations are explored.

Hicok, Daniel S.↗

Microbiome Variation Across Two Hemlock Species With Hemlock Woolly Adelgid Infestation

The hemlock woolly adelgid ( Adelges tsugae , HWA), an invasive insect, is devastating native hemlock populations in eastern North America, and management outcomes have so far had limited success. While many plant microbiomes influence and even support plant immune responses to insect herbivory, relatively little is known about the hemlock microbiome and its interactions with pathogens or herbivores such as HWA. Using 16S rRNA and ITS gene amplicon sequencing, we characterized the needle, branch, root, and rhizosphere microbiome of two hemlock species, Tsuga canadensis and T. sieboldii , that displayed low and high levels of HWA populations. We found that both archaeal/bacterial and fungal needle communities, as well as the archaeal/bacterial branch and root communities, varied in composition in both hemlock species relative to HWA population levels. While host species and plant-associated habitats explained a greater proportion of the variance in the microbiome than did HWA population level, high HWA populations were associated with enrichment of 100 likely fungal pathogen sequence variants across the four plant-associated habitats (e.g., needle, branch, root, rhizosphere) compared to trees with lower HWA populations. This work contributes to a growing body of literature linking plant pathogens and pests with the changes in the associated plant microbiome and host health. Furthermore, this work demonstrates the need to further investigate plant microbiome effects across multiple plant tissues to understand their influences on host health.

16S rRNA↗

Characterization of Proteoforms with Unknown Post-translational Modifications Using the MIScore

Various proteoforms may be generated from a single gene due to primary structure alterations (PSAs) such as genetic variations, alternative splicing, and post-translational modifications (PTMs). Top-down mass spectrometry is capable of analyzing intact proteins and identifying patterns of multiple PSAs, making it the method of choice for studying complex proteoforms. In top-down proteomics, proteoform identification is often performed by searching tandem mass spectra against a protein sequence database that contains only one reference protein sequence for each gene or transcript variant in a proteome. Because of the incompleteness of the protein database, an identified proteoform may contain unknown PSAs compared with the reference sequence. Proteoform characterization is to identify and localize PSAs in a proteoform. Although many software tools have been proposed for proteoform identification by top-down mass spectrometry, the characterization of proteoforms in identified proteoform-spectrum matches still relies mainly on manual annotation. We propose to use the Modification Identification Score (MIScore), which is based on Bayesian models, to automatically identify and localize PTMs in proteoforms. Experiments showed that the MIScore is accurate in identifying and localizing one or two modifications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution

Protein-coding genes evolved codon usage bias due to the combined but uneven effects of adaptive and nonadaptive influences. Studies in model fungi agree on codon usage bias as an adaptation for fine-tuning gene expression levels; however, such knowledge is lacking for most other fungi. Our comparative genomics analysis of over 450 species supports codon usage and transfer RNAs (tRNAs) as coadapted for translation speed and this is most likely a realization of convergent evolution. Rather than drift, phylogenetic reconstruction inferred adaptive radiation as the best explanation for the variation of interspecific codon usage bias. Although the phylogenetic signals for individual codon and tRNAs frequencies are lower than expected by genetic drift, we found remarkable conservation of highly expressed genes being codon optimized for translation by the most abundant tRNAs, especially by inosine-modified tRNAs. As an application, we present a sequence-to-expression neural network that uses codons to reliably predict highly expressed transcripts. The kingdom Fungi, with over a million species, includes many key players in various ecosystems and good targets for biotechnology. Collectively, our results have implications for better understanding the evolutionary success of fungi, as well as informing the biosynthetic manipulation of fungal genes.

59 BASIC BIOLOGICAL SCIENCES↗

TU-H-BRA-09: Relationship Between B0 and the Contrast-To-Noise Ratio (CNR) of Tumour to Background for MRI/Radiotherapy Hybrids

Purpose: To investigate the relationship in MRI between B{sub 0} and the contrast-to-noise ratio (CNR) of various tumour/normal tissue pairs. This study is motivated by the current interest in MRI/radiotherapy hybrids, for which multiple magnetic field strengths have been proposed. CNR is the single most important parameter governing the ability of a system to identify a tumour in real time for treatment guidance. The MRI community has long since recognized that the SNR of a well-designed MR system is roughly proportional to B{sub 0}, the polarizing magnetic field. However, the CNR between two tissues is much more complicated - dependent not only on this signal behavior, but also on the different relaxation properties of the tissues. Methods: Experimentally-based models of B{sub 0}-dependant relaxation for various tumour and normal tissues from the literature were used in conjunction with signal equations for MR sequences suitable for rapid realtime imaging to develop field-dependent predictions for CNR. These CNR models were developed for liver, lung, breast, glioma, and kidney tumours for spoiled-gradient echo (SGE) and balanced steady-state free precession (bSSFP) sequences. Results: In all cases there was an improved CNR at lower fields compared to linear dependency. Further, in some tumour sites, the CNR at lower fields was found to be comparable to, or sometimes higher than those at higher fields (i.e. bSSFP CNR for glioma, kidney and liver tumours). Conclusion: Due to the variation of tissue relaxation parameters with field, lower B{sub 0} fields have been shown to perform as well or better (in terms of CNR) than higher fields for some tumour sites. In other sites this effect was less pronounced. It is the complex relationship between CNR and B{sub 0} that leads to greater CNR at 0.5 T for certain tumour types studied here for fast imaging. B. Gino Fallone is a co-founder and CEO of MagnetTx Oncology Solutions (under discussions to license Alberta bi-planar linac MR for commercialization)

60 APPLIED LIFE SCIENCES↗

Expression profiles of cell-wall related genes vary broadly between two common maize inbreds during stem development

The cellular machinery for cell wall synthesis and metabolism is encoded by members of large multi-gene families. Maize is both a genetic model for grass species and a potential source of lignocellulosic biomass from crop residues. Genetic improvement of maize for its utility as a bioenergy feedstock depends on identification of the specific gene family members expressed during secondary wall development in stems. High-throughput sequencing of transcripts expressed in developing rind tissues of stem internodes provided a comprehensive inventory of cell wall-related genes in maize ( Zea mays , cultivar B73). Of 1239 of these genes, 854 were expressed among the internodes at =95 reads per 20 M, and 693 of them at =500 reads per 20 M. Grasses have cell wall compositions distinct from non-commelinid species; only one-quarter of maize cell wall-related genes expressed in stems were putatively orthologous with those of the eudicot Arabidopsis. Using a slope-metric algorithm, five distinct patterns for sub-sets of co-expressed genes were defined across a time course of stem development. For the subset of genes associated with secondary wall formation, fifteen sequence motifs were found in promoter regions. The same members of gene families were often expressed in two maize inbreds, B73 and Mo17, but levels of gene expression between them varied, with 30% of all genes exhibiting at least a 5-fold difference at any stage. Although presence-absence and copy-number variation might account for much of these differences, fold-changes of expression of a CADa and a FLA11 gene were attributed to polymorphisms in promoter response elements. Large genetic variation in maize as a species precludes the extrapolation of cell wall-related gene expression networks even from one common inbred line to another. Elucidation of genotype-specific expression patterns and their regulatory controls will be needed for association panels of inbreds and landraces to fully exploit genetic variation in maize and other bioenergy grass species.

09 BIOMASS FUELS↗

An algorithm for minimum-cost set-point ordering in a cryogenic wind tunnel

An algorithm for minimum cost ordering of set points in a cryogenic wind tunnel is developed. The procedure generates a matrix of dynamic state transition costs, which is evaluated by means of a single-volume lumped model of the cryogenic wind tunnel and the use of some idealized minimum-costs, which is evaluated by means of a single-volume lumped model of the cryogenic wind tunnel and the use of some idealized minimum-cost state-transition control strategies. A branch and bound algorithm is employed to determine the least costly sequence of state transitions from the transition-cost matrix. Some numerical results based on data for the National Transonic Facility are presented which show a strong preference for state transitions that consume to coolant. Results also show that the choice of the terminal set point in an open odering can produce a wide variation in total cost.

Tripp, J. S.↗

Spectroscopy of dwarf elliptical galaxies in the Fornax cluster

We present the results of spectroscopic observations of 10 nucleated dwarf elliptical galaxies (dE's) in the Fornax cluster. The blue spectra of Fornax dE galaxies indicate a wide range of metallicities at a given luminosity, similar to those of intermediate to metal-rich globular clusters. Metal abundances derived in this paper are well correlated with optical colors and agree with previous spectroscopic results. A discrepancy with metallicities inferred from infrared colors is evident; possible causes include an intermediate age population and dilution of spectral features by a blue light excess. Dwarf ellipticals exhibit a wide variation of hydrogen line strength which points to a complex star formation history. Prominent Balmer absorption lines are the signature of a young stellar population in the nuclei of some (but not all) dE's, while moderately strong Balmer lines in relatively metal-rich dE's are more consistent with an extended main sequence. In a few metal-poor dE galaxies, the hydrogen lines are consisent with, or perhaps weaker than, those found in Galactic globulars of similar metallicity. In the limited magnitude range of this sample, there is no apparent correlation of metallicity either with effective and central surface brightness, or with total and nuclear magnitudes. The velocity distribution of the Fornax dwarfs is flatter than that of brighter galaxies at the 75% confidence level, possibly indicating a difference in the kinematics of the two samples.

Held, Enrico V.↗

Thermophysical Properties of Mars' North Polar Layered Deposits and Related Materials from Mars Odyssey THEMIS

The presence of a thick sequence of horizontal layers of ice-rich material at Mars north pole, dissected by troughs and eroding at its margins, is undoubtedly telling us something about the evolution of Mars climate [1,2] we just don t know what yet. The North Polar Layered Deposits (NPLD) most likely formed as astronomically driven climate variations led to the deposition of conformable, areally extensive layers of ice and dust over the polar region. More recently, the balance seems to have fundamentally shifted to net erosion, as evidenced by the many troughs within the NPLD and the steep, arcuate scarps present near its margins, both of which expose layering. We defined a number of Regions of Interest ROI) for THEMIS to target as part of the Mars Odyssey Participating Scientist program. We use these THEMIS data in order to understand the morphology and color/thermal properties of the NPLD and related materials over relevant (i.e., m to km) spatial scales. We have assembled color mosaics of our ROIs in order to map the distribution of ices, the different layered units, dark material, and underlying basement. The color information from THEMIS is crucial for distinguishing these different units which are less distinct on Mars Orbiter Camera images. We wish to understand the nature of the marginal scarps and their relationship to the dark material. Our next, more ambitious goal is to derive the thermophysical properties of the different geologic materials using THEMIS and Mars Global Surveyor Thermal Emission Spectrometer TES) data.

Vasavada, A. R.↗

Trajectories for Europa Flyby Sample Return

Ballistic trajectories are computed which would enable a sample return mission to Europa without capturing, descending, or landing. The low-cost mission concept utilizes a free return trajectory that also involves a close flyby of Europa. Near Europa, a small impactor would kinetically impact the icy moon and generate a plume, subsequently sampled by the spacecraft. A broad search algorithm is developed to construct feasible itineraries, which considers Venus and Earth gravity assist sequences. High-quality solutions are then differentially corrected to be continuous using high-fidelity dynamics. The complete methodology is applicable to other outer-planet moons, notably Enceladus. The outbound VEEGA option is found to signifcantly reduce launch C3 compared to alternate options. The characteristics and quality of the solutions exhibit substantial variation over the 12-year period of Jupiter. Nevertheless, a variety of optimized results are computed with C3 as low as 16.0 sq.km/sq.sec, re-entry speed well below that of the Stardust capsule, and flight times of 9 to 15 years.

Jones, Drew Ryan↗

Subphotospheric fluctuations in magnetized radiative envelopes: contribution from unstable magnetosonic waves

We examine the excitation of unstable magnetosonic waves in the radiative envelopes of intermediate- and high-mass stars with a magnetic field of ~kG strength. Wind clumping close to the star and microturbulence can often be accounted for when including small-scale, subphotospheric density or velocity perturbations. Compressional waves – with wavelengths comparable to or shorter than the gas pressure scale height – can be destabilized by the radiative flux in optically thick media when a magnetic field is present, in a process called the radiation-driven magneto-acoustic instability (RMI). The instability does not require radiation or magnetic pressure to dominate over gas pressure, and acts independently of subsurface convection zones. Here we evaluate the conditions for the RMI to operate on a grid of stellar models covering a mass range 3–40 M ⊙ at solar metallicity. For a uniform 1 kG magnetic field, fast magnetosonic modes are unstable down to an optical depth of a few tens, while unstable slow modes extend beyond the depth of the iron convection zone. The qualitative behaviour is robust to magnetic field strength variations by a factor of a few. When combining our findings with previous results for the saturation amplitude of the RMI, we predict velocity fluctuations in the range ~0.1–10 kms -1 . These amplitudes are a monotonically increasing function of the ratio of radiation to gas pressure, or alternatively, of the zero-age main sequence mass.

79 ASTRONOMY AND ASTROPHYSICS↗

Heating events in the nascent solar system recorded by rare earth element isotopic fractionation in refractory inclusions

Equilibrium condensation of solar gas is often invoked to explain the abundance of refractory elements in planets and meteorites. This is partly motivated, by the observation that the depletions in both the least and most refractory rare earth elements (REEs) in meteoritic group II calcium-aluminum–rich inclusions (CAIs) can be reproduced by thermodynamic models of solar nebula condensation. We measured the isotopic compositions of Ce, Nd, Sm, Eu, Gd, Dy, Er, and Yb in eight CAIs to test this scenario. Contrary to expectation for equilibrium condensation, we find light isotope enrichment for the most refractory REEs and more subdued isotopic variations for the least refractory REEs. This suggests that group II CAIs formed by a two-stage process involving fast evaporation of preexisting materials, followed by near-equilibrium recondensation. The calculated time scales are consistent with heating in events akin to FU Orionis– or EX Lupi–type outbursts of eruptive pre–main-sequence stars.

58 GEOSCIENCES↗

Prompt Phrase Ordering Using Large Language Models in HPC: Evaluating Prompt Sensitivity

Large language models (LLMs) have demonstrated effective performance in domain-specific tasks, often requiring a well-designed prompt to guide their responses. However, optimizing the right prompt is challenging due to prompt sensitivity—the phenomenon where small changes in the prompt can lead to significant variations in performance. In this study, we evaluate prompt performance by examining all permutations of independent phrases to investigate prompt sensitivity and robustness. We used two datasets: the GSM8k dataset, which assesses mathematical reasoning, and a custom template prompt for summarizing database metadata. Our goal was to evaluate the performance across all permutations of a sequence of prompt phrases. The study was conducted using the llama3-instruct- 7B model hosted on Ollama, with computations parallelized in a high-performance computing environment. By comparing the average index of phrases in the best and worst-performing prompts, we found that the order of independent phrases within a prompt significantly impacts LLM performance. Additionally, we used Hamming distance to assess changes between phrase orderings, concluding that prompt modifications can dramatically affect scores, often by almost random chance. These findings support existing research on prompt sensitivity. We discuss the challenges of prompt optimization, noting that altering phrases in a successful prompt does not always result in another successful prompt.

97 MATHEMATICS AND COMPUTING↗

Young stellar objects detected by IRAS

Fluxes of 453 IRAS point sources selected for proximity to dense gas have been accurately determined by co-adding IRAS data. From this set, 258 sources are detected in all four bands: 12, 25, 60, and 100 microns. As distance from dense molecular material increases, these sources exhibit systematic trends in color and a markedly decreasing luminosity. These trends are broadly consistent with expected evolutionary changes in these stars, with younger objects found closer to dense gas. These data suggest a subtle variation on the criterion for identifying the youngest objects detectable by IRAS, in addition to that of steeply rising spectra: a color temperature which is uniform across all four IRAS bands in the range 40-50 K. These characteristics are used as a criterion to select point sources as candidate very young pre-main-sequence stars.

Clark, Frank O.↗

Temporal variation of intermediate-depth earthquakes around the time of the M 9.0 Tohoku-oki earthquake

Here, the temporal evolution of intermediate-depth seismicity before and after the 2011 M9.0 Tohoku-oki earthquake reveals interactions between plate interface slip and deformation in the subducting slab. We investigate seismicity rate changes in the upper and lower planes of the double seismic zone beneath northeast Japan using both a β statistic approach and a temporal epidemic type aftershock sequence model. We do not observe an anomalous precursory increase in intermediate-depth earthquake activity preceding the mainshock; however, following the mainshock, we observe a rate increase for the intermediate-depth earthquakes in the upper plane. The average ratio of upper plane to lower plane activity and the mean deep aseismic slip rate both increased by factor of 2. An increase of downdip compression in the slab resulting from coseismic and postseismic deformation enhanced seismicity in the upper plane, which is dominated by events accommodating downdip shortening from plate unbending.

58 GEOSCIENCES↗