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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 811 records · Page 45

The GTPase-activating protein p120RasGAP has an evolutionarily conserved “FLVR-unique” SH2 domain

The Src homology 2 (SH2) domain has a highly conserved architecture that recognizes linear phosphotyrosine motifs and is present in a wide range of signaling pathways across different evolutionary taxa. A hallmark of SH2 domains is the arginine residue in the conserved FLVR motif that forms a direct salt bridge with bound phosphotyrosine. In this work, we solve the X-ray crystal structures of the C-terminal SH2 domain of p120RasGAP (RASA1) in its apo and peptide-bound form. We find that the arginine residue in the FLVR motif does not directly contact pTyr1087 of a bound phosphopeptide derived from p190RhoGAP; rather, it makes an intramolecular salt bridge to an aspartic acid. Unexpectedly, coordination of phosphotyrosine is achieved by a modified binding pocket that appears early in evolution. Using isothermal titration calorimetry, we find that substitution of the FLVR arginine R377A does not cause a significant loss of phosphopeptide binding, but rather a tandem substitution of R398A (SH2 position βD4) and K400A (SH2 position βD6) is required to disrupt the binding. These results indicate a hitherto unrecognized diversity in SH2 domain interactions with phosphotyrosine and classify the C-terminal SH2 domain of p120RasGAP as “FLVR-unique.”

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

First High-Throughput Evaluation of Dark Matter Detector Materials

In this work we perform the first high-throughput search and evaluation of materials that can serve as excellent low-mass dark matter detectors. Using properties of close to 1000 materials from the Materials Project database, we project the sensitivity in dark matter parameter space for experiments constructed from each material, including both absorption and scattering processes between dark matter and electrons. Using the anisotropic materials in the dataset, we further compute the level of daily modulation in interaction rates and the resulting directional sensitivities, highlighting materials with prospects to detect the dark matter wind. Our methods provide the basic tools for the data-driven design of dark matter detectors, and our findings lay the groundwork for the next generation of highly optimized direct searches for dark matter as light as the keV scale. This represents a major step in the application of results from condensed matter physics to dark matter search design.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Reversible to irreversible transitions for ac driven skyrmions on periodic substrates

Abstract Using atomistic simulations, we investigate the dynamical behavior of magnetic skyrmions in dimer and trimer molecular crystal arrangements, as well as bipartite lattices at 3/2 and 5/2 fillings, under ac driving over a square array of anisotropy defects. For low ac amplitudes, at all fillings reversible motion appears in which the skyrmions return to their original positions at the end of each ac drive cycle and the diffusion is zero. We also identify two distinct irreversible regimes. The first is a translating regime in which the skyrmions form channels of flow in opposing directions and translate by one substrate lattice constant per ac drive cycle. The translating state appears in the dimer and trimer arrangements, and produces pronounced peaks in the diffusivity in the direction perpendicular to the external drive. For larger ac amplitudes, we find chaotic irreversible motion in which the skyrmions can randomly exchange places with each other over time, producing long-time diffusive behavior both parallel and perpendicular to the ac driving direction.

36 MATERIALS SCIENCE↗

The NtrYX Two-Component System Regulates the Bacterial Cell Envelope

ABSTRACT Activity of the NtrYX two-component system has been associated with important processes in diverse bacteria, ranging from symbiosis to nitrogen and energy metabolism. In the facultative alphaproteobacterium Rhodobacter sphaeroides , loss of the two-component system NtrYX results in increased lipid production and sensitivity to some known cell envelope-active compounds. In this study, we show that NtrYX directly controls multiple properties of the cell envelope. We find that the response regulator NtrX binds upstream of cell envelope genes, including those involved in peptidoglycan biosynthesis and modification and in cell division. We show that loss of NtrYX impacts the cellular levels of peptidoglycan precursors and lipopolysaccharide and alters cell envelope structure, increasing cell length and the thickness of the periplasm. Cell envelope function is also disrupted in the absence of NtrYX, resulting in increased outer membrane permeability. Based on the properties of R. sphaeroides cells lacking NtrYX and the target genes under direct control of this two-component system, we propose that NtrYX plays a previously undescribed, and potentially conserved, role in the assembly, structure, and function of the cell envelope in a variety of bacteria. IMPORTANCE The bacterial cell envelope provides many important functions. It protects cells from harsh environments, serves as a selective permeability barrier, houses bioenergetic functions, defines sensitivity to antibacterial agents, and plays a crucial role in biofilm formation, symbiosis, and virulence. Despite the important roles of this cellular compartment, we lack a detailed understanding of the biosynthesis and remodeling of the cell envelope. Here, we report that the R. sphaeroides two-component signaling system NtrYX is a previously undescribed regulator of cell envelope processes, providing evidence that it is directly involved in controlling transcription of genes involved in cell envelope assembly, structure, and function in this and possibly other bacteria. Thus, our data report on a newly discovered process used by bacteria to assemble and remodel the cell envelope.

59 BASIC BIOLOGICAL SCIENCES↗

Simulating Reflected Light Exoplanet Spectra of the Promising Direct Imaging Target, υ Andromedae d, with a New, Fast Sampling Method Using the Planetary Spectrum Generator

Simulations of exoplanet albedo profiles are key to planning and interpreting future direct imaging observations. In this paper we demonstrate the use of the Planetary Spectrum Generator (PSG) to produce simulations of reflected light exoplanet spectra. We use PSG to examine multiple issues relevant to all models of directly imaged exoplanet spectra and to produce sample spectra of the bright, nearby exoplanet υ Andromedae d (υ And d), a potential direct imaging target for next-generation facilities. We introduce a new, fast, and accurate subsampling technique that enables calculations of disk-integrated spectra one order of magnitude faster than Chebyshev–Gauss sampling for moderate- to high-resolution sampling. Using this method and a first-principles-derived atmosphere for υ And d, we simulate phase-dependent spectra for a variety of different potential atmospheric configurations. The simulated spectra for υ And d include versions with different haze and cloud properties. Based on our combined analysis of this planet’s orbital parameters, phase- and illumination-appropriate model spectra, and realistic instrument noise parameters, we find that υ And d is a potentially favorable direct imaging and spectroscopy target for the Coronagraph Instrument (CGI) on the Nancy Grace Roman Space Telescope. When a noise model corresponding to the Roman CGI SPC spectroscopy mode is included, PSG predicts the time required to reach a signal-to-noise ratio of 10 of the simulated spectra in both the central wavelength bin of the Roman CGI SPC spectroscopy mode (R = 50 spectrum) and of the Band 1 HLC imaging mode is approximately 400 and less than 40 hr, respectively. We also discuss potential pathways to extricating information about the planet and its atmosphere with future observations and find that Roman observations may be able to bound the interior temperature of the planet.

74 ATOMIC AND MOLECULAR PHYSICS↗

A molecular conveyor belt-associated protein controls the rotational direction of the bacterial type 9 secretion system

ABSTRACT Many bacteria utilize the type 9 secretion system (T9SS) for gliding motility, surface colonization, and pathogenesis. This dual-function motor supports both gliding motility and protein secretion, where rotation of the T9SS plays a central role. Fueled by the energy of the stored proton motive force and transmitted through the torque of membrane-anchored stator units, the rotary T9SS propels an adhesin-coated conveyor belt along the bacterial outer membrane like a molecular snowmobile, thereby enabling gliding motion. However, the mechanisms controlling the rotational direction and gliding motility of T9SS remain elusive. Shedding light on this mechanism, we find that in the gliding bacteriumFlavobacterium johnsoniae, deletion of the C-terminus of the conveyor belt-associated protein GldJ controls and, in fact, reverses the rotational direction of T9SS from counterclockwise (CCW) to clockwise (CW). This suggests that the interface between the conveyor belt-associated protein GldJ and the T9SS ring protein GldK plays an important role in controlling the directionality of T9SS, potentially by modulating its interaction with the stator complex GldLM, which drives motor rotation. Combined with MD simulation of the T9SS stator units GldLM, we suggest a “tri-component gearset” model where GldJ controls the rotational direction of its driver, the T9SS, thus providing adaptive sensory feedback to influence the motility of the gliding bacterium. IMPORTANCE The type 9 secretion system (T9SS) is fundamental to bacterial gliding motility, pathogenesis, and surface colonization. Our findings reveal that the C-terminal region of the conveyor belt-associated protein GldJ functions as a molecular switch which is capable of reversing the rotational direction of T9SS. Through the coordinated actions of the T9SS stator units (akin to a driving motor), the GldK ring (the gear that converts rotational energy into linear movement), and GldJ, this machinery forms a smart conveyor belt system reminiscent of flexible or cognitive mechanical conveyors. Such advanced conveyors can alter their direction to adapt to shifting demands. Here, we show that the bacterial T9SS similarly adjusts its rotational bias based on feedback from the conveyor belt-associated protein GldJ. This dual-role feedback mechanism underscores an evolved, controllable biological snowmobile, offering new avenues for studying how bacteria fine-tune motility in dynamic environments.

Microbiology↗

Dynamic programming and direct interaction for the optimum design of skeletal towers

A computer technique is proposed for automatically designing tower structures. Dynamic programming was used to find the optimum geometric configuration of the structural members, while the member sizes were proportioned by direct iteration. Tower structures are particularly suited to this method of automatic design since the rapidity of the analysis and design depends primarily upon substructuring. Substructuring of towers was comparatively simple because interaction between adjacent substructures is simulated with reasonable accuracy. Typical examples are presented to illustrate the method.

Howell, G. C.↗

Predictions of a population of cataclysmic variables in globular clusters

We have studied the number of cataclysmic variables (CVs) that should be active in globular clusters during the present epoch as a result of binary formation via two-body tidal capture. We predict the orbital period and luminosity distributions of CVs in globular clusters. The results arebased on Monte Carlo simulations combined with evolution calculations appropriate to each system formed during the lifetime of two specific globular clusters, omega Cen and 47 Tuc. From our study of these two clusters, which represent the range of core densities and states of mass segregation that are likely to be interesting, we extrapolate our results to the Galactic globlular cluster system. Although there is at present little direct observational evidence of CVs in globular clusters, we find that there should be a large number of active systems. We predict that there should be more than approximately 100 CVs in both 47 Tuc and omega Cen and several thousand in the Galactic globular cluster system. These numbers are based on two-body processes alone and represent a lower bound on the number of systems that may have been formed as a result of stellar interaction within globular clusters. The relation between these calculations and the paucity of optically detected CVs in globular clusters is discussed. Should future observations fail to find convincing evidence of a substantial population of cluster CVs, then the two-body tidal capture scenario is likely to be seriously constrained. Of the CVs we espect in 47 Tuc and omega Cen, approximately 45 and 20, respectively, should have accretion luminosities above 10(exp 33) ergs/s. If one utilizes a relation for converting accretion luminosity to hard X-ray luminosity that is based on observations of Galactic plane CVs, even these sources will not exhibit X-ray luminosities above 10(exp 33) ergs/s. While we cannot account directly for the most luminous subset of the low-luminosity globular cluster X-ray sources without assuming an evolutionary pattern that is different from that of the majority of CVs in the disk, we are able to account for all of the observed lower luminosity subset of these sources, many of which have been recently discovered through ROSAT observations. In order for our predicted integrated cluster X-ray luminosities to be consistent with observational upper limits, the relation between accretion and X-ray luminosities should be something like that inferred from the Galactic plane population of CVs. Our calculations predict a large number of systems with L(sub acc) is less than 10(exp 32) ergs/s. Although our calculations imply that globular clusters should have an enhancement of CVs relative to the number thought to be present in the Galactic disk, this enhancement is at most roughly an order of magnitude, not comparable to the factor of approximately 100 for low-mass X-ray binaries (LMXBs).

Di Stefano, R.↗

Extracting Material Property Measurements from Scientific Literature with Limited Annotations

Extracting material property data from scientific text is pivotal for advancing data-driven research in chemistry and materials science; however, the extensive annotation effort required to produce training data for named entity recognition (NER) models for this task often makes it a barrier to extracting specialized data sets. Here, in this work, we present a comparative study of the conventional, supervised NER methodology to alternative few-shot learning architectures and large language model (LLM)-based approaches that mitigate the need to label large training data sets. We find that the best-performing LLM (GPT-4o) not only excels in directly extracting relevant material properties based on limited examples but also enhances supervised learning through data augmentation. We supplement our findings with error and data quality assessments to provide a nuanced understanding of factors that impact property measurement extraction.

36 MATERIALS SCIENCE↗

Water reuse for sustainable microalgae cultivation: current knowledge and future directions

Microalgae hold great promise as environmentally sustainable sources of food, animal feed, and fuel. However, large amounts of water are used during microalgae cultivation and this negatively impacts economic viability and environmental sustainability. Reusing cultivation water can reduce the direct impacts of water usage and also reduce nutrient requirements and algal wastewater treatment. However, studies have shown that algae growth in reused water can be compromised, unaffected, or sometimes enhanced compared to controls. This review examines recent studies on water reuse to qualitatively understand these varied effects. Growth inhibitors and stimulators in reused water and their underlying mechanisms are discussed, as well as recent pre-treatment technologies and factors affecting the quality of reused water, such as microalgae taxa, culture conditions, and harvesting methods, are considered. A scheme is proposed for water reuse and harvesting methods based on the desired algal end products. Finally, taking these findings together, here we provide recommendations for further research directions as well as new insights into designing and integrating a cultivation strategy with a harvesting platform to reuse water for more efficient microalgae cultivation.

42 ENGINEERING↗

Stress analysis using direct-S wavelets produced by a vertical vibrator

We have determined how to extract the azimuth of maximum horizontal stress (SHmax) in deep rocks by doing a simple 360° mathematical rotation of a downgoing direct-S wavelet generated at the baseplate of a surface-based vertical vibrator. We worked with direct-S wavelets that travel through stressed rocks to a deep horizontal vertical seismic profile (VSP) geophone. We find that the azimuth where a polarity reversal occurs in mathematical rotations of this downgoing direct-S wavelet defines the azimuth of the SHmax in the overlying rocks. We tested this direct-S wavelet rotation method for determining the SHmax azimuth at a site in the Illinois Basin using legacy VSP data acquired in 2013. SHmax azimuths indicated by this simple wavelet-rotation method were determined when vertical vibrators were stationed at zero offset, at far offset, and at different azimuths around a VSP receiver well. These VSP-based SHmax azimuths agreed with the azimuth of the SHmax found by traditional minifrac tests in the VSP receiver well. This simple VSP data analysis procedure for detecting the azimuth of maximum horizontal stress has never, to our knowledge, been reported or discussed in the geophysical literature. This technical finding should be of interest to the worldwide geophysical community, especially to people who need to monitor how stress fields shift when fluids are injected into, or extracted from, deep porous reservoirs.

Geochemistry & Geophysics↗

Ancient and modern slopes in the Tharsis region of Mars

Ancient slope directions in the Martian Tharsis region are compared with new earth-based radar observations in an effort to detect tectonic deformations. Data were taken from 20-150 pixel/m Viking Orbiter images and from 200 m orthophotomosaics prepared by the U.S. Geological Survey. The positions of 475 lava flows were determined, covering widths between 5-10 km on higher slopes and 15-35 km on lower slopes. Most of the flows originated from four volcanos, although none issued from Olympus Mons, which makes up the central portion of the Plateau. Further radar-derived topography was made of, Arsia Mons and Syria Planum in latitudes 14-21 deg S to find differences in regional gradients and the lava flow directions, to determine if deformations occurred after the lava flows. A lithospheric stability is concluded, indicating no tectonic upheavals since the days of Tharsis Plateau volcanic activity.

Mouginis-Mark, P. J.↗

Magnetohydrodynamic wave propagation in one-dimensional nonhomogeneous, self-gravitating clouds

We study the propagation of magnetohydrodynamic (MHD) waves through nonhomogeneous, selfgravitating, magnetic media representative of molecular cloud environments and focus on the issues of cloud support and line profiles. Since the general treatment of this topic is burdened by a complex mathematical formalism, we consider simplifying geometries which yield analytical solutions in the linear wave limit. In particular, we study both magnetoacoustic and Alfven wave propagation along the density gradient in a one-imensional slab. Of specific relevance to molecular clouds, we find that the back reaction of the Alfven waves can provide a pressure along the direction of the magnetic field lines; this pressure can help support a density enhancement against gravitational collapse. Furthermore, we find that the velocity amplitudes of these waves increase as the density decreases, in rough agreement with observational estimates of line width versus density relations.

Fatuzzo, Marco↗

Engineering Redox Flow Battery Electrodes with Spatially Varying Porosity Using Non‐Solvent‐Induced Phase Separation

Redox flow batteries (RFBs) are a promising electrochemical platform for efficiently and reliably delivering electricity to the grid. Within the RFB, porous carbonaceous electrodes facilitate electrochemical reactions and distribute the flowing electrolyte. Tailoring electrode microstructure and surface area can improve RFB performance, lowering costs. Electrodes with spatially varying porosity may increase electrode utilization and provide surface area in reaction‐limited zones; however, the efficacy of such designs remains an open area of research. Herein, a non‐solvent‐induced phase‐separation (NIPS) technique that enables the reproducible synthesis of macrovoid‐free electrodes with well‐defined across‐thickness porosity gradients is described. The monotonically varying porosity profile is quantified and the physical properties and surface chemistries of porosity‐gradient electrodes are compared with macrovoid‐containing electrode, also synthesized by NIPS. Then, the electrochemical and fluid dynamic performance of the porosity‐gradient electrodes is evaluated, exploring the effect of changing the direction of the porosity gradient and benchmarking against the macrovoid‐containing electrode. Lastly, the performance is examined in a vanadium RFB, finding that the porosity‐gradient electrode outperforms the macrovoid electrode, is independent of gradient direction, and performs favorably compared to advanced electrodes in the contemporary literature. It is anticipated that the approach motivates further exploration of microstructurally tailored electrodes in electrochemical systems.

25 ENERGY STORAGE↗

Integrative Analysis of Desert Dust Size and Abundance Suggests Less Dust Climate Cooling

Desert dust aerosols affect Earths global energy balance through interactions with radiation, clouds, and ecosystems. But the magnitudes of these effects are so uncertain that it remains unclear whether atmospheric dust has a net warming or cooling effect on global climate. Consequently, it is still uncertain whether large changes in atmospheric dust loading over the past century have slowed or accelerated anthropogenic climate change, and the climate impact of possible future alterations in dust loading is similarly disputed. Here we use an integrative analysis of dust aerosol sizes and abundance to constrain the climatic impact of dust through direct interactions with radiation. Using a combination of observational, experimental, and model data, we find that atmospheric dust is substantially coarser than represented in current climate models. Since coarse dust warms global climate, the dust direct radiative effect (DRE) is likely less cooling than the 0.4 W m superscript 2 estimated by models in a current ensemble. We constrain the dust DRE to -0.20 (-0.48 to +0.20) W m superscript 2, which suggests that the dust DRE produces only about half the cooling that current models estimate, and raises the possibility that dust DRE is actually net warming the planet.

Atmospheric chemistry↗

The North Galactic Pole Rift and the Local Hot Bubble

The North Galactic Pole Rift (NGPR) is one of the few distinct neutral hydrogen clouds at high Galactic latitudes that have well-defined distances. It is located at the edge of the Local Cavity (LC) and provides an important test case for understanding the Local Hot Bubble (LHB), the presumed location for the hot diffuse plasma responsible for much of the observed 1/4 keV emission originating in the solar neighborhood. Using data from the ROSAT All- Sky Survey and the Planck reddening map, we find the path length within the LC (LHB plus Complex of Local Interstellar Clouds) to be 98 plus or minus 27 pc, in excellent agreement with the distance to the NGPR of 98 +/- 6 pc. In addition, we examine another 14 directions that are distributed over the sky where the LC wall is apparently optically thick at 1/4 keV. We find that the data in these directions are also consistent with the LHB model and a uniform emissivity plasma filling most of the LC.

ISM: bubbles aEuro" ISM: clouds aEuro" ISM: magnet↗

Rational design, synthesis, and evaluation of uncharged, “smart” bis-oxime antidotes of organophosphate-inhibited human acetylcholinesterase

Organophosphate (OP) intoxications from nerve agent and OP pesticide exposures are managed with pyridinium aldoxime–based therapies whose success rates are currently limited. The pyridinium cation hampers uptake of OPs into the central nervous system (CNS). Furthermore, it frequently binds to aromatic residues of OP-inhibited acetylcholinesterase (AChE) in orientations that are nonproductive for AChE reactivation, and the structural diversity of OPs impedes efficient reactivation. Improvements of OP antidotes need to include much better access of AChE reactivators to the CNS and optimized orientation of the antidotes' nucleophile within the AChE active-center gorge. On the basis of X-ray structures of a CNS-penetrating reactivator, monoxime RS194B, reversibly bound to native and venomous agent X (VX)–inhibited human AChE, here we created seven uncharged acetamido bis-oximes as candidate antidotes. Both oxime groups in these bis-oximes were attached to the same central, saturated heterocyclic core. Diverse protonation of the heterocyclic amines and oxime groups of the bis-oximes resulted in equilibration among up to 16 distinct ionization forms, including uncharged forms capable of diffusing into the CNS and multiple zwitterionic forms optimal for reactivation reactions. Conformationally diverse zwitterions that could act as structural antidote variants significantly improved in vitro reactivation of diverse OP-human AChE conjugates. Oxime group reorientation of one of the bis-oximes, forcing it to point into the active center for reactivation, was confirmed by X-ray structural analysis. Finally, our findings provide detailed structure-activity properties of several CNS-directed, uncharged aliphatic bis-oximes holding promise for use as protonation-dependent, conformationally adaptive, “smart” accelerated antidotes against OP toxicity.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Two-step electroweak symmetry-breaking: theory meets experiment

We study the phenomenology of a hypercharge-zero SU(2) triplet scalar whose existence is motivated by two-step electroweak symmetry-breaking. We consider both the possibility that the triplets are stable and contribute to the dark matter density, or that they decay via mixing with the standard model Higgs boson. The former is constrained by disappearing charged track searches at the LHC and by dark matter direct detection experiments, while the latter is constrained by existing multilepton collider searches. We find that a two-step electroweak phase transition involving a stable triplet with a negative quadratic term is ruled out by direct detection searches, while an unstable triplet with a mass less than 230 GeV is excluded at 95% confidence level.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗