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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 811 records · Page 45

Phase stability and thermodynamic database validation in a set of non-equiatomic Al-Co-Cr-Fe-Nb-Ni high-entropy alloys

A series of six high-entropy alloys in non-equiatomic proportions were produced to study the phase stability across a range of compositions within the Al-Co-Cr-Fe-Nb-Ni system. Phase identification was performed using SEM, TEM, and XRD and computational tools were employed for comparison to the experimental findings. Complex microstructures were obtained following exposure at 900 °C with precipitation of Laves, NiAl, γ' and δ phases. Primary and secondary Laves populations were identified and found to become more stable with increasing Fe and Nb content. Additions of Nb promoted the formation of thin, plate-like, δ phase at the expense of the secondary Laves. The NiAl phase was observed to precipitate in the alloys with high Fe content, above the γ' solvus temperature. Overall, the thermodynamic predictions using Thermo-Calc with the TCNi8 database were accurate with respect to identifying the phase composition, while TTNi8 provided good phase stability results. Furthermore, significant differences were observed with respect to the solvus temperatures of the precipitate phases.

36 MATERIALS SCIENCE↗

Scintillator Library: A database of inorganic and organic scintillator properties

The Scintillator Library (scintillator.lbl.gov) is a database of scintillator properties hosted by Lawrence Berkeley National Laboratory in a web-accessible format. It contains a variety of measured inorganic and organic scintillator properties extracted from peer-reviewed literature and manufacturer specifications. Data housed within the Scintillator Library supply an important resource for developers of scintillator-based detection systems and an aid for scientists seeking to establish connections between fundamental material and chemical properties and the associated scintillation performance.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Improved correlations of the fuel/cladding liquid penetration rate with the out-of-pile transient database

Here, utilizing data from the Out-of-Pile Transient Database (OPTD), we developed advanced correlations for the cladding liquid penetration rate in metallic fuels used in sodium-cooled fast reactors (SFRs). Based on the available OPTD data, our research highlights the key role of Pu concentration in influencing the liquid penetration behavior, showing different threshold fuel-cladding interaction temperatures, with burnup playing a substantial role, particularly in fuels with a 19% Pu concentration. The penetration rate exhibits a parabolic, diffusion-limited behavior, thereby facilitating predictions of maximum liquid penetration depth over time. These correlations are significantly more accurate, under a variety of conditions, compared to existing single-parameter models, and enhance our understanding of SFR metallic fuel behavior, promoting safer and more efficient reactor operations.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Performance and wake flow characterization of a 1:8.7-scale reference USDOE MHKF1 hydrokinetic turbine to establish a verification and validation test database

As hydrokinetic turbine technologies continue to advance towards commercialization, public datasets on the performance characteristics for these devices and their flow field effects are invaluable to advance our understanding of these technologies and to validate analytical and numerical models. The Applied Research Laboratory at The Pennsylvania State University (ARL Penn State) collaborated with Sandia National Laboratories and the University of California at Davis to design, fabricate (at a 1:8.7 scale), and experimentally test a novel hydrokinetic turbine rotor design to provide an open platform and dataset for further study and development. The water tunnel test of this three-bladed, horizontal-axis rotor recorded power production, blade loading, the near-wake flow, cavitation effects, and noise generation. These state-of-the-art measurements demonstrate much of the complex physics associated with the flow through an unducted, horizontal-axis turbine, and they elucidate the performance characteristics and flow field effects at an unprecedented fidelity, accuracy and resolution. Measurements of powering coefficients (power, torque and thrust) as a function of tip-speed-ratio were performed. The dataset also includes unsteady measurements of driveshaft loading, blade strain, tower pressures, and radiated noise. Detailed flow mapping using laser Doppler velocimetry, and planar and stereo particle image velocimetry includes measurements of mean velocity and Reynolds stresses. Although the wake measurements are limited to less than half a diameter, they reveal the complex flow patterns in the near-wake structure of the rotor. The full database, available at the United States Department of Energy’s marine and hydrokinetic data repository, includes tunnel and model Computer Aided Design geometry files and inflow data sufficient for a “Model-the-Test” computational Verification and Validation study.

13 HYDRO ENERGY↗

Physics-guided machine learning for improved accuracy of the National Solar Radiation Database

The National Solar Radiation Database (NSRDB) provides high-resolution spatiotemporal solar irradiance data for the entire globe. The NSRDB uses a two-step Physical Solar Model (PSM) to compute the effects of clouds and other atmospheric variables on the solar radiation reaching the surface of the Earth. Physical and optical cloud properties are fundamental inputs to the PSM and are derived from the National Oceanic and Atmospheric Administration's Geostationary Operational Environmental Satellites. This paper describes recent improvements to the NSRDB driven by physics-guided machine learning methods for cloud property retrieval. The impacts of these new methods on the NSRDB irradiance data are validated using an extensive set of ground measurement sites, showing significant improvement for all sites. We report on average, the mean absolute percentage error for global horizontal irradiance and direct normal irradiance show reductions of 2.16 and 3.95 percentage points respectively for all daylight conditions, 5.92 and 17.39 percentage points respectively for cloudy conditions, and 9.00 and 22.59 percentage points respectively for gap-filled cloudy conditions. These new methods will help improve the quality and accuracy of the irradiance and cloud data in the NSRDB.

14 SOLAR ENERGY↗

Integration of a physics-based direct normal irradiance ($\mathrm{DNI}$) model to enhance the National Solar Radiation Database ($\mathrm{NSRDB}$)

The National Solar Radiation Database (NSRDB) is an extensively used dataset that furnishes satellite-retrieved solar resource data across the United States and an expanding list of other countries. Although the NSRDB uses a physical model to compute global horizontal irradiance (GHI), it currently employs an empirical approach based on surface observations to estimate cloudy-sky direct normal irradiance (DNI). Recently, a new physics-based approach, known as the Fast All-sky Radiation Model for Solar applications with DNI (FARMS-DNI), was developed to improve DNI forecasting. FARMS-DNI integrates direct and scattered solar radiances within the circumsolar region, resulting in improved day-ahead forecasting of DNI by incorporating it into the Weather Research and Forecasting model with Solar extensions (WRF-Solar). This study incorporates FARMS-DNI into the NSRDB algorithm to produce high-spatiotemporal-resolution DNI data from satellite data. The accuracy of the NSRDB based on FARMS-DNI is analyzed using surface observations from 19 sites situated within the National Oceanic and Atmospheric Administration (NOAA) Surface Radiation Budget (SURFRAD) and Solar Radiation (SOLRAD) networks, the University of Oregon (UO) network, the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) network, and at the National Renewable Energy Laboratory (NREL). The results demonstrate that FARMS-DNI reduces the significant overestimation of DNI in the conventional NSRDB at all surface sites, particularly in cloud overcast conditions classified using both satellite retrievals and surface observations. Consequently, this new model can effectively improve the overall accuracy of the NSRDB. The results also suggest that further improvement of DNI estimates at individual time steps, however, requires advanced satellite techniques and precise identification of clouds and retrieval of cloud properties.

14 SOLAR ENERGY↗

Aurorasaurus database of real-time, crowd-sourced aurora data for space weather research

This work documents the details of Aurorasaurus citizen science data for the period spanning 2015 and 2016 as well as its routine data filtering protocols. Aurorasaurus citizen science data is a collection of auroral sightings submitted to the project via its website or apps and mined from social media. It is a robust data set and particularly abundant during strong geomagnetic storms when auroral precipitation models have the highest uncertainty. This data is offered to the scientific community for use through an open-access database in its raw and scientific formats, each of which is described in detail in this technical report. Furthermore, by demonstrating its scientific utility, we aim to encourage its integration into auroral research.

54 ENVIRONMENTAL SCIENCES↗

HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search

Abstract Recent analyses of public microbial genomes have found over a million biosynthetic gene clusters, the natural products of the majority of which remain unknown. Additionally, GNPS harbors billions of mass spectra of natural products without known structures and biosynthetic genes. We bridge the gap between large-scale genome mining and mass spectral datasets for natural product discovery by developing HypoRiPPAtlas, an Atlas of hypothetical natural product structures, which is ready-to-use for in silico database search of tandem mass spectra. HypoRiPPAtlas is constructed by mining genomes using seq2ripp, a machine-learning tool for the prediction of ribosomally synthesized and post-translationally modified peptides (RiPPs). In HypoRiPPAtlas, we identify RiPPs in microbes and plants. HypoRiPPAtlas could be extended to other natural product classes in the future by implementing corresponding biosynthetic logic. This study paves the way for large-scale explorations of biosynthetic pathways and chemical structures of microbial and plant RiPP classes.

60 APPLIED LIFE SCIENCES↗

A rule-free workflow for the automated generation of databases from scientific literature

Abstract In recent times, transformer networks have achieved state-of-the-art performance in a wide range of natural language processing tasks. Here we present a workflow based on the fine-tuning of BERT models for different downstream tasks, which results in the automated extraction of structured information from unstructured natural language in scientific literature. Contrary to existing methods for the automated extraction of structured compound-property relations from similar sources, our workflow does not rely on the definition of intricate grammar rules. Hence, it can be adapted to a new task without requiring extensive implementation efforts and knowledge. We test our data-extraction workflow by automatically generating a database for Curie temperatures and one for band gaps. These are then compared with manually curated datasets and with those obtained with a state-of-the-art rule-based method. Furthermore, in order to showcase the practical utility of the automatically extracted data in a material-design workflow, we employ them to construct machine-learning models to predict Curie temperatures and band gaps. In general, we find that, although more noisy, automatically extracted datasets can grow fast in volume and that such volume partially compensates for the inaccuracy in downstream tasks.

36 MATERIALS SCIENCE↗

2DMatPedia, an open computational database of two-dimensional materials from top-down and bottom-up approaches

Two-dimensional (2D) materials have been a hot research topic in the last decade, due to novel fundamental physics in the reduced dimension and appealing applications. Systematic discovery of functional 2D materials has been the focus of many studies. Here, we present a large dataset of 2D materials, with more than 6,000 monolayer structures, obtained from both top-down and bottom-up discovery procedures. First, we screened all bulk materials in the database of Materials Project for layered structures by a topology-based algorithm and theoretically exfoliated them into monolayers. Then, we generated new 2D materials by chemical substitution of elements in known 2D materials by others from the same group in the periodic table. The structural, electronic and energetic properties of these 2D materials are consistently calculated, to provide a starting point for further material screening, data mining, data analysis and artificial intelligence applications. We present the details of computational methodology, data record and technical validation of our publicly available data (http://www.2dmatpedia.org/).

36 MATERIALS SCIENCE↗

Unravelling the diversity of magnetotactic bacteria through analysis of open genomic databases

Magnetotactic bacteria (MTB) are prokaryotes that possess genes for the synthesis of membrane-bounded crystals of magnetite or greigite, called magnetosomes. Despite over half a century of studying MTB, only about 60 genomes have been sequenced. Most belong to Proteobacteria, with a minority affiliated with the Nitrospirae, Omnitrophica, Planctomycetes, and Latescibacteria. Due to the scanty information available regarding MTB phylogenetic diversity, little is known about their ecology, evolution and about the magnetosome biomineralization process. This study presents a large-scale search of magnetosome biomineralization genes and reveals 38 new MTB genomes. Several of these genomes were detected in the phyla Elusimicrobia, Candidatus Hydrogenedentes, and Nitrospinae, where magnetotactic representatives have not previously been reported. Analysis of the obtained putative magnetosome biomineralization genes revealed a monophyletic origin capable of putative greigite magnetosome synthesis. The ecological distributions of the reconstructed MTB genomes were also analyzed and several patterns were identified. These data suggest that open databases are an excellent source for obtaining new information of interest.

59 BASIC BIOLOGICAL SCIENCES↗

Database of pharmacokinetic time-series data and parameters for 144 environmental chemicals

Time courses of compound concentrations in plasma are used in chemical safety analysis to evaluate the relationship between external administered doses and internal tissue exposures. This type of experimental data is rarely available for the thousands of non-pharmaceutical chemicals to which people may potentially be unknowingly exposed but is necessary to properly assess the risk of such exposures. In vitro assays and in silico models are often used to craft an understanding of a chemical’s pharmacokinetics; however, the certainty of the quantitative application of these estimates for chemical safety evaluations cannot be determined without in vivo data for external validation. To address this need, we present a public database of chemical time-series concentration data from 567 studies in humans or test animals for 144 environmentally-relevant chemicals and their metabolites (187 analytes total). All major administration routes are incorporated, with concentrations measured in blood/plasma, tissues, and excreta. We also include calculated pharmacokinetic parameters for some studies, and a bibliography of additional source documents to support future extraction of time-series. In addition to pharmacokinetic model calibration and validation, these data may be used for analyses of diferential chemical distribution across chemicals, species, doses, or routes, and for meta-analyses on pharmacokinetic studies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

MusMorph, a database of standardized mouse morphology data for morphometric meta-analyses

Complex morphological traits are the product of many genes with transient or lasting developmental effects that interact in anatomical context. Mouse models are a key resource for disentangling such effects, because they offer myriad tools for manipulating the genome in a controlled environment. Unfortunately, phenotypic data are often obtained using laboratory-specific protocols, resulting in self-contained datasets that are difficult to relate to one another for larger scale analyses. To enable meta-analyses of morphological variation, particularly in the craniofacial complex and brain, we created MusMorph, a database of standardized mouse morphology data spanning numerous genotypes and developmental stages, including E10.5, E11.5, E14.5, E15.5, E18.5, and adulthood. To standardize data collection, we implemented an atlas-based phenotyping pipeline that combines techniques from image registration, deep learning, and morphometrics. Alongside stage-specific atlases, we provide aligned micro-computed tomography images, dense anatomical landmarks, and segmentations (if available) for each specimen (N = 10,056). Our workflow is open-source to encourage transparency and reproducible data collection.

59 BASIC BIOLOGICAL SCIENCES↗

A representation-independent electronic charge density database for crystalline materials

Abstract In addition to being the core quantity in density-functional theory, the charge density can be used in many tertiary analyses in materials sciences from bonding to assigning charge to specific atoms. The charge density is data-rich since it contains information about all the electrons in the system. With the increasing prevalence of machine-learning tools in materials sciences, a data-rich object like the charge density can be utilized in a wide range of applications. The database presented here provides a modern and user-friendly interface for a large and continuously updated collection of charge densities as part of the Materials Project. In addition to the charge density data, we provide the theory and code for changing the representation of the charge density which should enable more advanced machine-learning studies for the broader community.

36 MATERIALS SCIENCE↗

An open database of computed bulk ternary transition metal dichalcogenides

Abstract We present a dataset of structural relaxations of bulk ternary transition metal dichalcogenides (TMDs) computed via plane-wave density functional theory (DFT). We examined combinations of up to two chalcogenides with seven transition metals from groups 4–6 in octahedral (1T) or trigonal prismatic (2H) coordination. The full dataset consists of 672 unique stoichiometries, with a total of 50,337 individual configurations generated during structural relaxation. Our motivations for building this dataset are (1) to develop a training set for the generation of machine and deep learning models and (2) to obtain structural minima over a range of stoichiometries to support future electronic analyses. We provide the dataset as individual VASP xml files as well as all configurations encountered during relaxations collated into an ASE database with the corresponding total energy and atomic forces. In this report, we discuss the dataset in more detail and highlight interesting structural and electronic features of the relaxed structures.

36 MATERIALS SCIENCE↗

DIPS-Plus: The enhanced database of interacting protein structures for interface prediction

Abstract In this work, we expand on a dataset recently introduced for protein interface prediction (PIP), the Database of Interacting Protein Structures (DIPS), to present DIPS-Plus, an enhanced, feature-rich dataset of 42,112 complexes for machine learning of protein interfaces. While the original DIPS dataset contains only the Cartesian coordinates for atoms contained in the protein complex along with their types, DIPS-Plus contains multiple residue-level features including surface proximities, half-sphere amino acid compositions, and new profile hidden Markov model (HMM)-based sequence features for each amino acid, providing researchers a curated feature bank for training protein interface prediction methods. We demonstrate through rigorous benchmarks that training an existing state-of-the-art (SOTA) model for PIP on DIPS-Plus yields new SOTA results, surpassing the performance of some of the latest models trained on residue-level and atom-level encodings of protein complexes to date.

59 BASIC BIOLOGICAL SCIENCES↗

Refractiveindex.info database of optical constants

Abstract We introduce the refractiveindex.info database, a comprehensive open-source repository containing optical constants for a wide array of materials, and describe in detail the underlying dataset. This collection, derived from a meticulous compilation of data sourced from peer-reviewed publications, manufacturers’ datasheets, and authoritative texts, aims to advance research in optics and photonics. The data is stored using a YAML-based format, ensuring integrity, consistency, and ease of access. Each record is accompanied by detailed metadata, facilitating a comprehensive understanding and efficient utilization of the data. In this descriptor, we outline the data curation protocols and the file format used for data records, and briefly demonstrate how the data can be organized in a user-friendly fashion akin to the books in a traditional library.

43 PARTICLE ACCELERATORS↗

CHUWD-H v1.0: a comprehensive historical hourly weather database for U.S. urban energy system modeling

Reliable and continuous meteorological data are crucial for modeling the responses of energy systems and their components to weather and climate conditions, particularly in densely populated urban areas. However, existing long-term datasets often suffer from spatial and temporal gaps and inconsistencies, posing great challenges for detailed urban energy system modeling and cross-city comparison under realistic weather conditions. Here we introduce the Historical Comprehensive Hourly Urban Weather Database (CHUWD-H) v1.0, a 23-year (1998-2020) gap-free and quality-controlled hourly weather dataset covering 550 weather station locations across all urban areas in the contiguous United States. CHUWD-H v1.0 synthesizes hourly weather observations from stations with outputs from a physics-based solar radiation model and a reanalysis dataset through a multi-step gap filling approach. A 10-fold Monte Carlo cross-validation suggests that the accuracy of this gap filling approach surpasses that of conventional gap filling methods. Designed primarily for urban energy system modeling, CHUWD-H v1.0 should also support historical urban meteorological and climate studies, including the validation and evaluation of urban climate modeling.

54 ENVIRONMENTAL SCIENCES↗