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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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DOE OSTI2024

Constrained Turret Defense with Fixed Final Time

In this paper, we extend existing turret defense differential game formulations involving a turn-constrained turret and mobile agent to include specified final time and a constraint. For the purposes of this analysis, the specified final time may represent some exogenous input, perhaps representing the time at which some other event will take place. As for the constraint, it represents a no-fly zone for the mobile agent. The scenario is formulated as a two-player, zero-sum differential game and solved via the method of characteristics (i.e., back-propagation of equilibrium trajectories). Three different trajectory types make up the solution: trajectories that end with the turret aligned with the mobile agent, trajectories that end with the mobile agent on the constraint boundary, and regular trajectories.

differential game, game theory↗
DOE OSTI2014

Modern Radiation Therapy for Nodal Non-Hodgkin Lymphoma—Target Definition and Dose Guidelines From the International Lymphoma Radiation Oncology Group

Radiation therapy (RT) is the most effective single modality for local control of non-Hodgkin lymphoma (NHL) and is an important component of therapy for many patients. Many of the historic concepts of dose and volume have recently been challenged by the advent of modern imaging and RT planning tools. The International Lymphoma Radiation Oncology Group (ILROG) has developed these guidelines after multinational meetings and analysis of available evidence. The guidelines represent an agreed consensus view of the ILROG steering committee on the use of RT in NHL in the modern era. The roles of reduced volume and reduced doses are addressed, integrating modern imaging with 3-dimensional planning and advanced techniques of RT delivery. In the modern era, in which combined-modality treatment with systemic therapy is appropriate, the previously applied extended-field and involved-field RT techniques that targeted nodal regions have now been replaced by limiting the RT to smaller volumes based solely on detectable nodal involvement at presentation. A new concept, involved-site RT, defines the clinical target volume. For indolent NHL, often treated with RT alone, larger fields should be considered. Newer treatment techniques, including intensity modulated RT, breath holding, image guided RT, and 4-dimensional imaging, should be implemented, and their use is expected to decrease significantly the risk for normal tissue damage while still achieving the primary goal of local tumor control.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2015

Modern Radiation Therapy for Primary Cutaneous Lymphomas: Field and Dose Guidelines From the International Lymphoma Radiation Oncology Group

Primary cutaneous lymphomas are a heterogeneous group of diseases. They often remain localized, and they generally have a more indolent course and a better prognosis than lymphomas in other locations. They are highly radiosensitive, and radiation therapy is an important part of the treatment, either as the sole treatment or as part of a multimodality approach. Radiation therapy of primary cutaneous lymphomas requires the use of special techniques that form the focus of these guidelines. The International Lymphoma Radiation Oncology Group has developed these guidelines after multinational meetings and analysis of available evidence. The guidelines represent an agreed consensus view of the International Lymphoma Radiation Oncology Group steering committee on the use of radiation therapy in primary cutaneous lymphomas in the modern era.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2024

Structural and biochemical basis for regiospecificity of the flavonoid glycosyltransferase UGT95A1

Glycosylation is a predominant strategy plants use to fine-tune the properties of small molecule metabolites to affect their bioactivity, transport, and storage. It is also important in biotechnology and medicine as many glycosides are utilized in human health. Small molecule glycosylation is largely carried out by family 1 glycosyltransferases. Here, we report a structural and biochemical investigation of UGT95A1, a family 1 GT enzyme from Pilosella officinarum that exhibits a strong, unusual regiospecificity for the 3'-O position of flavonoid acceptor substrate luteolin. We obtained an apo crystal structure to help drive the analyses of a series of binding site mutants, revealing that while most residues are tolerant to mutations, key residues M145 and D464 are important for overall glycosylation activity. Interestingly, E347 is crucial for maintaining the strong preference for 3'-O glycosylation, while R462 can be mutated to increase regioselectivity. The structural determinants of regioselectivity were further confirmed in homologous enzymes. Our study also suggests that the enzyme contains large, highly dynamic, disordered regions. We showed that while most disordered regions of the protein have little to no implication in catalysis, the disordered regions conserved among investigated homologs are important to both the overall efficiency and regiospecificity of the enzyme. This report represents a comprehensive in-depth analysis of a family 1 GT enzyme with a unique substrate regiospecificity and may provide a basis for enzyme functional prediction and engineering.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2015

Exponential time-differencing with embedded Runge–Kutta adaptive step control

We have presented the first embedded Runge–Kutta exponential time-differencing (RKETD) methods of fourth order with third order embedding and fifth order with third order embedding for non-Rosenbrock type nonlinear systems. A procedure for constructing RKETD methods that accounts for both order conditions and stability is outlined. In our stability analysis, the fast time scale is represented by a full linear operator in contrast to particular scalar cases considered before. An effective time-stepping strategy based on reducing both ETD function evaluations and rejected steps is described. Comparisons of performance with adaptive-stepping integrating factor (IF) are carried out on a set of canonical partial differential equations: the shock-fronts of Burgers equation, interacting KdV solitons, KS controlled chaos, and critical collapse of two-dimensional NLS.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2022

Countdown to perovskite space launch: Guidelines to performing relevant radiation-hardness experiments

Perovskite photovoltaics (PVs) are under intensive development for promise in terrestrial energy production. Soon, the community will find out how much of that promise may become reality. Perovskites also open new opportunities for lower cost space power. However, radiation tolerance of space environments requires appropriate analysis of relevant devices irradiated under representative radiation conditions. We present guidelines designed to rigorously test the radiation tolerance of perovskite PVs. We review radiation conditions in common orbits, calculate nonionizing and ionizing energy losses (NIEL and IEL) for perovskites, and prioritize proton radiation for effective nuclear interactions. Low-energy protons (0.05-0.15 MeV) create a representative uniform damage profile, whereas higher energy protons (commonly used in ground-based evaluation) require significantly higher fluence to accumulate the equivalent displacement damage dose due to lower scattering probability. Furthermore, high-energy protons may "heal" devices through increased electronic ionization. These procedural guidelines differ from those used to test conventional semiconductors.

14 SOLAR ENERGY↗
DOE OSTI2021

Optimized simple and affordable procedure for differentiation of monocyte-derived dendritic cells from LRF: An accessible and valid alternative biological source

Dendritic cells are one of the most popular immune cells, which plays a remarkable role in both immunotherapy and tolerance induction. Due to unwanted side effects of leukocyte presence in donated blood, the policy of blood service is the pre-storage reduction of leukocytes, which today, filtration is the most common method for this purpose. The filtration method has led to diminished access to Buffy coat as a generally used conventional source of biological cells. We developed a simple, affordable, and reproducible method for dendritic cell differentiation from filter-derived monocytes and, the results of the filter study were compared with differentiated DCs from the conventional buffy coat-derived monocytes. The Monocytes were recovered from leukoreduction filter using an optimized protocol with supplemented PBS buffer. Following the adhesion method, CD14{sup +} Monocyte-enriched population with the purity of 94 % was obtained. After cytokine stimulation over a 6-day period and maturation induction by LPS, differentiated DCs were evaluated for morphology, surface markers (CD86, CD40, CD83 and, HLA-DR), antigen uptake potency and IL-12 secretion. Analysis and comparison of the results represented no significant difference between the two groups. Accordingly, we conclude that leukoreduction filters could be introduced as a reliable and research-grade source of monocyte for DC generation in biological research.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2017

Effects of Catalytic Action and Ligand Binding on Conformational Ensembles of Adenylate Kinase

Crystal structures of adenylate kinase (AdK) from Escherichia coli capture two states: an “open” conformation (apo) obtained in the absence of ligands and a “closed” conformation in which ligands are bound. Other AdK crystal structures suggest intermediate conformations that may lie on the transition pathway between these two states. To characterize the transition from open to closed states in solution, X-ray solution scattering data were collected from AdK in the apo form and with progressively increasing concentrations of five different ligands. Scattering data from apo AdK are consistent with scattering predicted from the crystal structure of AdK in the open conformation. In contrast, data from AdK samples saturated with Ap5A do not agree with that calculated from AdK in the closed conformation. Using cluster analysis of available structures, we selected representative structures in five conformational states: open, partially open, intermediate, partially closed, and closed. We used these structures to estimate the relative abundances of these states for each experimental condition. X-ray solution scattering data obtained from AdK with AMP are dominated by scattering from AdK in the open conformation. For AdK in the presence of high concentrations of ATP and ADP, the conformational ensemble shifts to a mixture of partially open and closed states. Even when AdK is saturated with Ap5A, a significant proportion of AdK remains in a partially open conformation. Here, these results are consistent with an induced-fit model in which the transition of AdK from an open state to a closed state is initiated by ATP binding.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2025

Quantitative Determination of Electronic Effects in Free Radicals through Open-Shell Hammett Substituent Constants

Hammett substituent constants (σ), which quantify the electronic effects of functional groups, are widely used for predicting the properties of organic compounds and investigating reaction mechanisms. While these values have been obtained for a wide range of closed-shell substituents, measurements of analogous values for open-shell substituents are rare due to challenges associated with their short lifetimes. Here, in this report, we developed a combined experimental and computational approach for quantifying the electronic properties of open-shell substituents based on changes in nitrile vibrational frequencies (ν(C≡N)). By coupling pulse radiolysis and time-resolved infrared spectroscopy (PR-TRIR), we measured ν(C≡N) IR bands of 30 para - and meta -substituted benzonitriles bearing C-, N-, and S-centered radicals. A linear scaling relationship was obtained between these experimental values and values obtained from DFT calculations. Using these computed values, two different Hammett constants, σ m , and σ p + , were determined for a series of C-, N-, O-, S-, Si-, and B-centered radicals. The differences between σm and σp+ values enable the separate evaluation of inductive and resonance effects in these open-shell substituents. The results suggest that there are three classes of radicals: one is electron withdrawing (σ m , σ p + > 0), one is electron donating (σm, σp+ < 0), and one is inductively withdrawing but resonance donating (σ m > 0, σ p + < 0). Our study represents a general approach to the analysis of the electronic properties of open-shell species and has potential applications in a wide range of molecular processes involving free radical intermediates.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2012

Monitoring groundwater-surface water interaction using time-series and time-frequency analysis of transient three-dimensional electrical resistivity changes

Time-lapse resistivity imaging is increasingly used to monitor hydrologic processes. Compared to conventional hydrologic measurements, surface time-lapse resistivity provides (1) superior spatial coverage in two or three dimensions, (2) potentially high-resolution information in time, and (3) information in the absence of wells. However, interpretation of time-lapse electrical tomograms is complicated by the ever increasing size and complexity of long-term, three-dimensional time-series conductivity datasets. Here, we use three-dimensional (3D) surface time-lapse electrical imaging to monitor subsurface electrical conductivity variations associated with stage-driven groundwater/surface-water interaction along a stretch of the Columbia River adjacent to the Hanford 300 Area, Hanford WA, USA. We reduce the resulting 3D conductivity time series using both correlation and time-frequency analysis to isolate a paleochannel causing enhanced groundwater/river-water interaction. Correlation analysis on the time-lapse imaging results concisely represents enhanced ground water/surface-water interaction within the paleochannel, and provides information concerning groundwater flow velocities. Time-frequency analysis using the Stockwell (S) Transform provides additional information by 1) identifying the stage periodicities driving ground water/river-water interaction due to upstream dam operations, 2) identifying segments in time-frequency space when these interactions are most active. These results provide new insight into the distribution and timing of river water intrusion into the Hanford 300 area, which has a governing influence on the behavior of a uranium plume left over from historical nuclear fuel processing operations.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2021

Carbon‐Neutral Pathways for the United States

Abstract The Intergovernmental Panel on Climate Change (IPCC) Special Report on Global Warming of 1.5°C points to the need for carbon neutrality by mid‐century. Achieving this in the United States in only 30 years will be challenging, and practical pathways detailing the technologies, infrastructure, costs, and tradeoffs involved are needed. Modeling the entire U.S. energy and industrial system with new analysis tools that capture synergies not represented in sector‐specific or integrated assessment models, we created multiple pathways to net zero and net negative CO 2 emissions by 2050. They met all forecast U.S. energy needs at a net cost of 0.2–1.2% of GDP in 2050, using only commercial or near‐commercial technologies, and requiring no early retirement of existing infrastructure. Pathways with constraints on consumer behavior, land use, biomass use, and technology choices (e.g., no nuclear) met the target but at higher cost. All pathways employed four basic strategies: energy efficiency, decarbonized electricity, electrification, and carbon capture. Least‐cost pathways were based on >80% wind and solar electricity plus thermal generation for reliability. A 100% renewable primary energy system was feasible but had higher cost and land use. We found multiple feasible options for supplying low‐carbon fuels for non‐electrifiable end uses in industry, freight, and aviation, which were not required in bulk until after 2035. In the next decade, the actions required in all pathways were similar: expand renewable capacity 3.5 fold, retire coal, maintain existing gas generating capacity, and increase electric vehicle and heat pump sales to >50% of market share. This study provides a playbook for carbon neutrality policy with concrete near‐term priorities.

Williams, James H.↗
DOE OSTI2020

Benchmark calculations of radiative forcing by greenhouse gases

Changes in concentrations of greenhouse gases lead to changes in radiative fluxes throughout the atmosphere. The value of this change, the instantaneous radiative forcing, varies across climate models, due partly to differences in the distribution of clouds, humidity, and temperature across models, and partly due to errors introduced by approximate treatments of radiative transfer. This paper describes an experiment within the Radiative Forcing Model Intercomparision Project that uses benchmark calculations made with line–by–line models to identify parameterization error in the representation of absorption and emission by greenhouse gases. Clear–sky instantaneous forcing by greenhouse gases is computed using a set of 100 profiles, selected from a re–analysis of present–day conditions, that represent the global annual mean forcing from pre–industrial times to the present–day with sampling errors of less than 0.01 W m –2 . Six contributing line–by–line models agree in their estimate of this forcing to within 0.025 W m –2 while even recently–developed parameterizations have typical errors four or more times larger, suggesting both that the samples reveal true differences among line–by–line models and that parameterization error will be readily identifiable. Agreement among line–by–line models is better in the longwave than in the shortwave where differing treatments of the water vapor vapor continuum affect estimates of forcing by carbon dioxide and methane. The impacts of clouds on instantaneous radiative forcing are estimated from climate model simulations. Here, the adjustment due to stratospheric temperature change by assuming fixed dynamical heating. Adjustments are large only for ozone and for carbon dioxide, for which stratospheric cooling introduces modest non–linearity.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2015

Encyclopædia curvatonis

We investigate whether the predictions of single-field models of inflation are robust under the introduction of additional scalar degrees of freedom, and whether these extra fields change the potentials for which the data show the strongest preference. We study the situation where an extra light scalar field contributes both to the total curvature perturbations and to the reheating kinematic properties. Ten reheating scenarios are identified, and all necessary formulas allowing a systematic computation of the predictions for this class of models are derived. They are implemented in the public library ASPIC, which contains more than 75 single-field potentials. This paves the way for a forthcoming full Bayesian analysis of the problem. A few representative examples are displayed and discussed.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Reekeekee- and roodoodooviruses, two different Microviridae clades constituted by the smallest DNA phages

Small circular single-stranded DNA viruses of the Microviridae family are both prevalent and diverse in all ecosystems. They usually harbor a genome between 4.3 and 6.3 kb, with a microvirus recently isolated from a marine Alphaproteobacteria being the smallest known genome of a DNA phage (4.248 kb). A subfamily, Amoyvirinae, has been proposed to classify this virus and other related small Alphaproteobacteria-infecting phages. Here, we report the discovery, in meta-omics data sets from various aquatic ecosystems, of sixteen complete microvirus genomes significantly smaller (2.991–3.692 kb) than known ones. Phylogenetic analysis reveals that these sixteen genomes represent two related, yet distinct and diverse, novel groups of microviruses—amoyviruses being their closest known relatives. We propose that these small microviruses are members of two tentatively named subfamilies Reekeekeevirinae and Roodoodoovirinae. As known microvirus genomes encode many overlapping and overprinted genes that are not identified by gene prediction software, we developed a new methodology to identify all genes based on protein conservation, amino acid composition, and selection pressure estimations. Surprisingly, only four to five genes could be identified per genome, with the number of overprinted genes lower than that in phiX174. These small genomes thus tend to have both a lower number of genes and a shorter length for each gene, leaving no place for variable gene regions that could harbor overprinted genes. Even more surprisingly, these two Microviridae groups had specific and different gene content, and major differences in their conserved protein sequences, highlighting that these two related groups of small genome microviruses use very different strategies to fulfill their lifecycle with such a small number of genes. The discovery of these genomes and the detailed prediction and annotation of their genome content expand our understanding of ssDNA phages in nature and are further evidence that these viruses have explored a wide range of possibilities during their long evolution.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Limits on Stellar-Mass Compact Objects as Dark Matter from Gravitational Lensing of Type Ia Supernovae

We present that the nature of dark matter (DM) remains unknown despite very precise knowledge of its abundance in the Universe. An alternative to new elementary particles postulates DM as made of macroscopic compact halo objects (MACHO) such as black holes formed in the very early Universe. Stellar-mass primordial black holes (PBHs) are subject to less robust constraints than other mass ranges and might be connected to gravitational-wave signals detected by the Laser Interferometer Gravitational-Wave Observatory (LIGO). New methods are therefore necessary to constrain the viability of compact objects as a DM candidate. Here we report bounds on the abundance of compact objects from gravitational lensing of type Ia supernovae (SNe). Current SNe data sets constrain compact objects to represent less than 35.2% (Joint Lightcurve Analysis) and 37.2% (Union 2.1) of the total matter content in the Universe, at 95% confidence level. The results are valid for masses larger than ~ 0.01 M ⊙ (solar masses), limited by the size SNe relative to the lens Einstein radius. We demonstrate the mass range of the constraints by computing magnification probabilities for realistic SNe sizes and different values of the PBH mass. Our bounds are sensitive to the total abundance of compact objects with M ≳ 0.01 M ⊙ and complementary to other observational tests. These results are robust against cosmological parameters, outlier rejection, correlated noise, and selection bias. PBHs and other MACHOs are therefore ruled out as the dominant form of DM for objects associated to LIGO gravitational wave detections. Lastly, these bounds constrain early-Universe models that predict stellar-mass PBH production and strengthen the case for lighter forms of DM, including new elementary particles.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2018

Statistical inference of empirical constituents in partitioned analysis from integral-effect experiments: An application in thermo-mechanical coupling

Rapid advancements in parallel computing over the last two decades have enabled simulations of complex, coupled systems through partitioning. In partitioned analysis, independently developed constituent models communicate, representing dependencies between multiple physical phenomena that occur in the full system. Figure 1 schematically demonstrates a coupled system with two constituent models, each resolving different physical behavior. In this figure, the constituent model, denoted as the “consumer,” relies upon some input parameter that is being provided by the constituent model acting as a “feeder”. The role of the feeder model is to map operating conditions (i.e. those that are stimulating the process) to consumer inputs, thus providing functional inputs to the consumer model*. Problems arise if the feeder model cannot be built–a challenge that is prevalent for highly complex systems in extreme operational conditions that push the limits of our understanding of underlying physical behavior. Often, these are also the situations where separate-effect experiments isolating the physical phenomena are not available; meaning that experimentally determining the unknown constituent behavior is not possible (Bauer and Holland, 1995; Unal et al., 2013), and that integral-effect experiments that reflect the behavior of the complete system tend to be the only available observations. In this paper, the authors advocate for the usefulness of integral-effect experiments in furthering a model developer’s knowledge of the physics principles governing the system behavior of interest.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

Multi-View Convolutional Neural Network for Data Spoofing Cyber-Attack Detection in Distribution Synchrophasors

Security of Distribution Synchrophasors Data (DSD) is of paramount importance as the data is used for critical smart grid applications including situational awareness, advanced protection, and dynamic control. Unfortunately, the DSD are attractive targets for malicious attackers aiming to damage grid. Data spoofing is a new class of deceiving attack, where the DSD of one Phasor Measurement Units (PMUs) is tampered by other PMUs thereby spoiling measurement based applications. In order to address this issue, a source authentication based data spoofing attack detection method is proposed using Multi-view Convolutional Neural Network (MCNN). First, common components embedded in raw frequency measurements from DSD are removed by Savitzky-Golay (SG) filter. Second, fast S transform (FST) is utilized to extract representative spatial fingerprints via time frequency analysis. Third, the spatial fingerprint is fed to MCNN, which combines dilated and standard convolutions for automatic feather extraction and source identification. Finally, according to the output of MCNN, spoofing attack detection is performed via threshold criterion. Extensive experiments with actual DSD from multiple locations in FNET/Grideye are conducted to verify the effectiveness of the proposed method.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes

Freshwater Verrucomicrobia spp. are cosmopolitan in lakes and rivers, and yet their roles and ecophysiology are not well understood, as cultured freshwater Verrucomicrobia spp. are restricted to one subdivision of this phylum. Here, we greatly expanded the known genomic diversity of this freshwater lineage by recovering 19 Verrucomicrobia draft genomes from 184 metagenomes collected from a eutrophic lake and a humic bog across multiple years. Most of these genomes represent the first freshwater representatives of several Verrucomicrobia subdivisions. Genomic analysis revealed Verrucomicrobia to be potential (poly)saccharide degraders and suggested their adaptation to carbon sources of different origins in the two contrasting ecosystems. We identified putative extracellular electron transfer genes and so-called “ Planctomycete -specific” cytochrome c -encoding genes and identified their distinct distribution patterns between the lakes/layers. Overall, our analysis greatly advances the understanding of the function, ecophysiology, and distribution of freshwater Verrucomicrobia , while highlighting their potential role in freshwater carbon cycling.

59 BASIC BIOLOGICAL SCIENCES↗