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At least 829 records · Page 46

Systematic analysis of coding and noncoding DNA sequences using methods of statistical linguistics

We compare the statistical properties of coding and noncoding regions in eukaryotic and viral DNA sequences by adapting two tests developed for the analysis of natural languages and symbolic sequences. The data set comprises all 30 sequences of length above 50 000 base pairs in GenBank Release No. 81.0, as well as the recently published sequences of C. elegans chromosome III (2.2 Mbp) and yeast chromosome XI (661 Kbp). We find that for the three chromosomes we studied the statistical properties of noncoding regions appear to be closer to those observed in natural languages than those of coding regions. In particular, (i) a n-tuple Zipf analysis of noncoding regions reveals a regime close to power-law behavior while the coding regions show logarithmic behavior over a wide interval, while (ii) an n-gram entropy measurement shows that the noncoding regions have a lower n-gram entropy (and hence a larger "n-gram redundancy") than the coding regions. In contrast to the three chromosomes, we find that for vertebrates such as primates and rodents and for viral DNA, the difference between the statistical properties of coding and noncoding regions is not pronounced and therefore the results of the analyses of the investigated sequences are less conclusive. After noting the intrinsic limitations of the n-gram redundancy analysis, we also briefly discuss the failure of the zeroth- and first-order Markovian models or simple nucleotide repeats to account fully for these "linguistic" features of DNA. Finally, we emphasize that our results by no means prove the existence of a "language" in noncoding DNA.

NASA Discipline Number 14-10↗

Investigation of the notch sensitivity of tailorable long fiber discontinuous prepreg composite laminates

Tailorable discontinuous fiber composite laminates provide relative formability beyond that of continuous fiber laminates, while achieving improved mechanical performance over comparable stochastic systems. Here, in this work, the notch sensitivity of engineered prepreg platelet molded composite (PPMC) laminates is investigated using the open-hole tension (OHT) test and compared to available data for stochastic PPMCs and continuous fiber laminates made with the same material. The press-formed thermoplastic composites (AS4/PEKK) were molded with a quasi-isotropic stacking sequence. The discontinuous PPMC laminate was found to be notch insensitive with OHT strengths ranging from 145.4 MPa (CV $=$ 7%) for d/w $=$ 0.5 to 229.3 MPa (CV $=$ 9%) for d/w $=$ 0.25. The highly ordered meso-structure of the engineered PPMC laminate yields comparatively excellent mechanical properties for relatively thin laminates in contrast to stochastic systems. Both net- and gross-section failures were observed for d/w $=$ 0.25, which suggests that the engineered PPMC laminates studied here maintain a degree of inherent, internal stress concentrations that compete with those caused by geometric features such as a circular hole. Computational simulations of the OHT tests with explicitly represented platelets were found to be in good agreement with experimental measurements. The progressive failure analysis was used to conduct a numerical investigation of the stacking sequence and platelet meso-morphology.

36 MATERIALS SCIENCE↗

Seasonally Active Slipface Avalanches in the North Polar Sand Sea of Mars: Evidence for a Wind-Related Origin

Meter-scale MRO/HiRISE camera images of dune slipfaces in the north polar sand sea of Mars reveal the presence of deep alcoves above depositional fans. These features are apparently active under current climatic conditions, because they form between observations taken in subsequent Mars years. Recently, other workers have hypothesized that the alcoves form due to destabilization and mass-wasting during sublimation of CO2 frost in the spring. While there is evidence for springtime modification of these features, our analysis of early springtime images reveals that over 80% of the new alcoves are visible underneath the CO2 frost. Thus, we present an alternative hypothesis that formation of new alcoves and fans occurs prior to CO2 deposition. We propose that fans and alcoves form primarily by aeolian processes in the mid- to late summer, through a sequence of aeolian deposition on the slipface, over-steepening, failure, and dry granular flow. An aeolian origin is supported by the orientations of the alcoves, which are consistent with recent wind directions. Furthermore, morphologically similar but much smaller alcoves form on terrestrial dune slipfaces, and the size differences between the terrestrial and Martian features may reflect cohesion in the near-subsurface of the Martian features. The size and preservation of the largest alcoves on the Martian slipfaces also support the presence of an indurated surface layer; thus, new alcoves might be sites of early spring CO2 sublimation and secondary mass-wasting because they act as a window to looser, less indurated materials that warm up more quickly in the spring.

Horgan, Briony H. N.↗

Automated Programmable Logic Controller Memory Forensics Using RGB Image Analysis and Deep Learning

The introduction of Industry 4.0 and Internet-based technologies has enhanced industrial control system operations but have inadvertently increased their vulnerabilities to cyber attacks. When an industrial control system is compromised, security analysts need to identify the root cause quickly to start the recovery process and develop mitigation strategies. Memory forensics is critical in the incident analysis process to ascertain what occurred. Approaches for analyzing the persistent memory in industrial control devices are limited and almost nonexistent for volatile memory. This chapter proposes an automated methodology for programmable logic controller memory dump analysis using computer vision and deep learning techniques. The methodology converts the sequences of bytes in a programmable logic controller memory dump to red-green-blue pixels and employs a deep learning model that learns the underlying patterns and features of pre-labeled forensic artifacts in images and segments them into distinct regions. The trained model is employed to automatically segment new memory images and identify forensic artifacts. Evaluation of the methodology on a Schneider Electric Modicon M221 programmable logic controller under code injection and code modification attacks demonstrates its ability to detect attack artifacts in memory dumps.

Asmar Awad, Rima [ORNL] (ORCID:0000000233407742)↗

A Pd III Sulfate Dimer Initiates Rapid Methane Monofunctionalization by H Atom Abstraction

An electrogenerated Pd III 2 species in fuming sulfuric acid is competent for rapid and concurrent methane monohydroxylation to methyl bisulfate (CH 3 OSO 3 H) and methane sulfonation to methanesulfonic acid (CH 3 SO 3 H). In situ NMR at 50 °C is used to track methane transformation exclusively to CH 3 OSO 3 H and CH 3 SO 3 H at high conversions. Integrating a set of kinetic and computational studies, the mechanism of methane monofunctionalization by Pd III 2 is examined. Here, experimental rate laws and common kinetic isotope effects for CH 3 OSO 3 H and CH 3 SO 3 H formation suggest that both transformations proceed via a common rate-limiting C-H activation step. Introduction of O 2 or Pd II,III 2 suppresses CH 3 SO 3 H generation, indicating a radical chain sequence. Although the metal-metal bonded Pd III 2 complex is a net two-electron oxidant, our aggregate kinetic data point to a mechanistic model that features rate-limiting H atom abstraction by the Pd III 2 complex to generate a methyl radical intermediate. The CH 3 • intermediate then recombines with Pd II,III 2 to furnish a CH 3 Pd III 2 intermediate that reductively eliminates CH 3 OSO 3 H. Alternatively, the CH 3 intermediate can enter a chain reaction with SO 3 to generate CH 3 SO 3 H. DFT computations support the radical-based C-H activation by Pd III 2 and delineate H atom abstraction pathways with computed reaction barriers and kinetic isotope effects (KIEs) that are consistent with experimental data. These mechanistic investigations challenge the paradigm of electrophilic C-H activation and highlight H atom abstraction as a potent pathway for selective methane C-H oxidative functionalization at high reaction rates.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Asymmetric and endogenous magnetic reconnection processes in quasi-collisionless plasmas

We define an endogenous magnetic reconnection process as the one having a driving factor that lies within the region where a drastic change in magnetic field topology occurs. A process of this kind is shown to take place when an electron temperature gradient is present in a plasma column and when, referring to quasi-collisionless regimes, the evolving electron temperature fluctuations are anisotropic. A two-fluid theory, for weakly collisional plasma regimes and confinement configurations which have sheared magnetic fields, is formulated, and two classes of reconnecting modes are identified. The localized class of modes is characterized by a transverse reconnecting magnetic field $\tilde{B}_x$ of odd parity, as a function of the radial variable (across the reconnection layer). The width of this remains significant even when large macroscopic distances, such as those of interest to space and astrophysics, are considered. The relevant reconnection can be referred to as antisymmetric. In fact, the (additional and realistic) presence of a finite current density gradient leads to finding modes with mixed $\tilde{B}_x$ parity which are no longer localized within the reconnection layer. Then, the resulting magnetic islands are not symmetric. In view of the fact that there are plasmas in the Universe with considerable electron thermal energy contents, the features of the novel reconnecting modes can be relied upon in order to produce generation of magnetic fields or conversion of magnetic energy into particle energy (through a sequence of mode-particle resonances).

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Nuclear Safety [Vol. 37, No. 1, January-March 1996]

Nuclear Safety is a journal that covers significant issues in the field of nuclear safety. Its primary scope is safety in the design, construction, operation, and decommissioning of nuclear power reactors worldwide and the research and analysis activities that promote this goal, but it also encompasses the safety aspects of the entire nuclear fuel cycle, including fuel fabrication, spent-fuel processing and handling, and nuclear waste disposal, the handling of fissionable materials and radioisotopes, and the environmental effects of all these activities. Table of Contents for this issue follows. GENERAL SAFETY CONSIDERATIONS: 1 A Decision Support System for Maintenance Management of a Boiling-Water Reactor Power Plant, J. H. Shen, A. Ray, and S. Levine; ACCIDENT ANALYSIS: 12 On Prediction of the Ignition Potential of Uranium Metal and Hydride, M. Epstein, W. Luangdilok, M. G. Plys, and H. K. Fauske; 26 An Overview of the Primary Parameters and Methods for Determining Condensation Heat Transfer to Containment Structures, J. Green and K. Almenas; DESIGN FEATURES: 49 Modem Tornado Design of Nuclear and Other Potentially Hazardous Facilities, J. D. Stevenson and Y. Zaho; U.S. NUCLEAR REGULATORY COMMISSION INFORMATION AND ANALYSES: 73 1994 Accident Sequence Precursor Program Results, R. J. Belles, J. W. Cletcher, D. A. Coplnger, B. W. Dolan, J. W. Minarick, and P. D. O'Reilly; ANNOUNCEMENTS: 93 American Institute of Chemical Engineers (AlChE) Spring 1997 National Meeting; 94 European Safety and Reliability Association International Conference on Safety and Reliability ESREL ’97; 95 Criticality Safety Challenges in the Next Decade; 96 21st International Symposium on the Scientific Basis for Nuclear Waste Management; 84 The Authors; 88 Letter to the Editor; 90 Indexes to Nuclear Safety, Volume 36.

05 NUCLEAR FUELS↗

New constraints on the molecular gas in the prototypical HyLIRGs BRI 1202-0725 and BRI 1335-0417

We present Karl G Jansky Very Large Array observations of CO(J=2→1) line emission and rest-frame 250 GHz continuum emission of the Hyper-Luminous IR Galaxies (HyLIRGs) BRI 1202–0725 (z = 4.69) and BRI 1335–0417 (z = 4.41), with an angular resolution as high as 0.″15. Our low-order CO observations delineate the cool molecular gas, the fuel for star formation in the systems, in unprecedented detail. For BRI 1202–0725, line emission is seen from both extreme starburst galaxies: the quasar host and the optically obscured submm galaxy (SMG), in addition to one of the Lyα emitting galaxies in the group. Line emission from the SMG shows an east–west extension of about 0.″6. For Lyα-2, the CO emission is detected at the same velocity as [C ii] and [N ii], indicating a total gas mass ∼4.0 × 10{sup 10} M {sub ⊙}. The CO emission from BRI 1335–0417 peaks at the nominal quasar position, with a prominent northern extension (∼1″, a possible tidal feature). The gas depletion timescales are ∼10{sup 7} years for the three HyLIRGs, consistent with extreme starbursts, while that of Lyα-2 may be consistent with main sequence galaxies. We interpret these sources as major star formation episodes in the formation of massive galaxies and supermassive black holes via gas-rich mergers in the early universe.

79 ASTRONOMY AND ASTROPHYSICS↗

Standard power regulator for the multi-mission modular spacecraft

The Standard Power Regulator Unit (SPRU) which forms the central building block of the Modular Power Subsystem (MPS) for the Multi-mission Modular Spacecraft (MMS) is described. A functional description of the SPRU is presented, detailing key design features, operational characteristics, and internal redundancy as well as giving block and schematic diagrams for all major subassemblies. The description of a qualification test program consisting of ten sequences ranging from a physical examination of the unit to calculating vibration and sine sweep of power on shock tests is presented. The results showed that some significant anomalies were encountered but no catastrophic failures were indicated, although several power module failures were found due to overvoltage malfunctions of the solar array stimulator.

Kichak, R. A.↗

Computer vision for robots; Proceedings of the Meeting, Cannes, France, December 2-6, 1985

The conference presents papers on segmentation techniques, three-dimensional recognition and representation, processing image sequences, and navigation and mobility. Particular attention is given to determining the pose of an object, adaptive least squares correlation with geometrical constraints, and the reliable formation of feature vectors for two-dimensional shape representation. Other topics include the real-time tracking of a target moving on a natural textured background, computer vision for the guidance of roving robots, and integrating sensory data for object recognition tasks.

Faugeras, O. D.↗

Crystallization behavior of a melt-spun Fe-Ni based steel

Whether Fe-Ni-based alloys solidify with a bcc or fcc structure has been observed by many investigators to be a stronger function of kinetics and undercooling than strictly free-energy minimization. Such behavior has been observed in an Fe(52.8)Ni(28.7)Al(3.4)Ti(6.1)B(9.0) alloy. The alloy was cast as ribbons about 45 microns thick using a dual free-jet variation of chillbock melt spinning against a Cu wheel. Optical, X-ray, and electron analyses of the as-cast and annealed ribbons were performed. A microstructure of at least four layers containing combinations of ecc, bcc, and amorphous phases in differing proportions was observed in the as-cast ribbon. The midthickness layer had the most unusual features, containing fcc grains about 75 nm in size encompassing spherulitic regions as large as 15 microns comprised of fcc grains about 25 nm in size. The crystallization sequence responsible for the as-cast microstructure is discussed in terms of the competition between the formation of bcc and fcc phases as influenced by undercooling, recalescence, and variations in cooling rate experienced by the as-cast ribbon.

Michal, G. M.↗

Tethys geology and tectonics revisited

Tethys, a medium sized icy satellite of Saturn, was imaged by both Voyager 1 and 2 spacecraft at sufficiently high resolution to allow some geologic analysis. One fairly complete and several brief descriptions of Tethys' geology have been given. Partial results are given herein of a new analysis of Tethys' geology done as part of a comparative tectonic and cryovolcanic study of the saturnian satellites. A new geologic sketch map of Tethys' north polar area is given. This map is based on a sequence of images transformed to a polar stereographic projection at the same scale. The images present the same area under different illuminations, each of which brings out different features. A new global map is in progress.

Croft, Steven K.↗

Quantitative spectral types for 19 Algol secondaries

Time-resolved spectra of 19 short-period Algol-type binary star systems obtained during total eclipse are used to derive the temperature spectral class of the mass-losing secondary component. The spectral classifications employed a quantitative comparison of the strengths of absorption features in stars of known spectral class with those of the program stars. The luminosity spectral class can not be determined from these data, so both main-sequence and giant stars were used for the comparison. Our spectral types are compared with published types and found to be generally in good agreement, unless the published types are derived from the light curves. The photometrically determined types are systematically later than our directly determined types. This effect is shown also to exist in catalogs of Algol parameters.

Yoon, Tae S.↗

The Sun as a probe of varying G

In order to explore the ability of helioseismology and features of solar models to test the constancy of the gravitational constant G during the last 4.5 Gyr of solar evolution, we have constructed a grid of evolutionary sequences for solar models under the assumptions that G varies with time, and have explored the sensitivity of their nonradial acoustic mode oscillation spectra to G variability. All final models satisfy the standard constraints for the present Sun and, except for the variation in G, were constructed under the assumptions of a standard solar model. When compared with the observed solar p-mode spectrum, our models definitely rule out beta greater than 0.4 and beta less than -0.4, where G(t) proportional to t(exp -beta) over the last 4.5 Gyr. These limits can be tightened to rule out absolute value of beta greater than 0 (0.1) by the use of other solar observables. For nonmonotonic variation in G this suggests that long-timescale variations greater than 0 (5%) in G are ruled out over the last 4.5 Gyr. Future prospects for improving the sensitivity of helioseismic tests of a varying G are also discussed. Finally, we explore the sensitivity of the predicted solar neutrino flux to varying G.

Demarque, P.↗

Case Study: Analysis of Autonomous Center line Tracking Neural Networks

Deep neural networks have gained widespread usage in a number of applications. However, limitations such as lack of explainability and robustness inhibit building trust in their behavior, which is crucial in safety critical applications such as autonomous driving. Therefore, techniques which aid in understanding and providing guarantees for neural network behavior are the need of the hour. In this paper, we present a case study applying a recently proposed technique, Prophecy, to analyze the behavior of a neural network model, provided by our industry partner and used for autonomous guiding of airplanes on taxi runways. This regression model takes as input an image of the runway and produces two outputs, cross-track error and heading error, which represent the position of the plane relative to the center line. We use the Prophecy tool to extract neuron activation patterns for the correctness and safety properties of the model. We show the use of these patterns to identify features of the input that explain correct and incorrect behavior. We also use the patterns to provide guarantees of consistent behavior. We explore a novel idea of using sequences of images (instead of single images) to obtain good explanations and identify regions of consistent behavior.

Deep Neural Networks↗

Mapping the Interstellar Reddening and Extinction toward Baade's Window Using Minimum Light Colors of ab-type RR Lyrae Stars: Revelations from the De-reddened Color–Magnitude Diagrams

We have obtained repeated images of six fields toward the Galactic bulge in five passbands (u, g, r, i, z) with the DECam imager on the Blanco 4 m telescope at CTIO. From more than 1.6 billion individual photometric measurements in the field centered on Baade’s window, we have detected 4877 putative variable stars. A total of 474 of these have been confirmed as fundamental mode RR Lyrae stars, whose colors at minimum light yield line-of- sight reddening determinations, as well as a reddenning law toward the Galactic Bulge, which differs significantly from the standard R(V) = 3.1 formulation. Assuming that the stellar mix is invariant over the 3 square-degree field, we are able to derive a line-of-sight reddening map with sub-arcminute resolution, enabling us to obtain de-reddened and extinction corrected color–magnitude diagrams (CMDs) of this bulge field using up to 2.5 million well-measured stars. The corrected CMDs show unprecedented detail and expose sparsely populated sequences: for example, delineation of the very wide red giant branch, structure within the red giant clump, the full extent of the horizontal branch, and a surprising bright feature that is likely due to stars with ages younger than 1 Gyr. We use the RR Lyrae stars to trace the spatial structure of the ancient stars and find an exponential decline in density with Galactocentric distance. We discuss ways in which our data products can be used to explore the age and metallicity properties of the bulge, and how our larger list of all variables is useful for learning to interpret future LSST alerts.

Abhijit Saha↗

Nuclear Safety [Vol. 37, No. 1, January-March 1996]

Nuclear Safety is a journal that covers significant issues in the field of nuclear safety. Its primary scope is safety in the design, construction, operation, and decommissioning of nuclear power reactors worldwide and the research and analysis activities that promote this goal, but it also encompasses the safety aspects of the entire nuclear fuel cycle, including fuel fabrication, spent-fuel processing and handling, and nuclear waste disposal, the handling of fissionable materials and radioisotopes, and the environmental effects of all these activities. Table of Contents for this issue follows. GENERAL SAFETY CONSIDERATIONS: 1 A Decision Support System for Maintenance Management of a Boiling-Water Reactor Power Plant, J. H. Shen, A. Ray, and S. Levine; ACCIDENT ANALYSIS: 12 On Prediction of the Ignition Potential of Uranium Metal and Hydride, M. Epstein, W. Luangdilok, M. G. Plys, and H. K. Fauske; 26 An Overview of the Primary Parameters and Methods for Determining Condensation Heat Transfer to Containment Structures, J. Green and K. Almenas; DESIGN FEATURES: 49 Modem Tornado Design of Nuclear and Other Potentially Hazardous Facilities, J. D. Stevenson and Y. Zaho; U.S. NUCLEAR REGULATORY COMMISSION INFORMATION AND ANALYSES: 73 1994 Accident Sequence Precursor Program Results, R. J. Belles, J. W. Cletcher, D. A. Copinger, B. W. Dolan, J. W. Minarick, and P. D. O'Reilly; ANNOUNCEMENTS: 93 American Institute of Chemical Engineers (AlChE) Spring 1997 National Meeting; 94 European Safety and Reliability Association International Conference on Safety and Reliability ESREL ’97; 95 Criticality Safety Challenges in the Next Decade; 96 21st International Symposium on the Scientific Basis for Nuclear Waste Management; 84 The Authors; 88 Letter to the Editor; 90 Indexes to Nuclear Safety, Volume 36.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗