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At least 847 records · Page 47

MOJAVE. X. PARSEC-SCALE JET ORIENTATION VARIATIONS AND SUPERLUMINAL MOTION IN ACTIVE GALACTIC NUCLEI

We describe the parsec-scale kinematics of 200 active galactic nucleus (AGN) jets based on 15 GHz Very Long Baseline Array (VLBA) data obtained between 1994 August 31 and 2011 May 1. We present new VLBA 15 GHz images of these and 59 additional AGNs from the MOJAVE and 2 cm Survey programs. Nearly all of the 60 most heavily observed jets show significant changes in their innermost position angle over a 12-16 yr interval, ranging from 10° to 150° on the sky, corresponding to intrinsic variations of ∼0.°5 to ∼2°. The BL Lac jets show smaller variations than quasars. Roughly half of the heavily observed jets show systematic position angle trends with time, and 20 show indications of oscillatory behavior. The time spans of the data sets are too short compared to the fitted periods (5-12 yr), however, to reliably establish periodicity. The rapid changes and large jumps in position angle seen in many cases suggest that the superluminal AGN jet features occupy only a portion of the entire jet cross section and may be energized portions of thin instability structures within the jet. We have derived vector proper motions for 887 moving features in 200 jets having at least five VLBA epochs. For 557 well-sampled features, there are sufficient data to additionally study possible accelerations. We find that the moving features are generally non-ballistic, with 70% of the well-sampled features showing either significant accelerations or non-radial motions. Inward motions are rare (2% of all features), are slow (<0.1 mas yr{sup –1}), are more prevalent in BL Lac jets, and are typically found within 1 mas of the unresolved core feature. There is a general trend of increasing apparent speed with distance down the jet for both radio galaxies and BL Lac objects. In most jets, the speeds of the features cluster around a characteristic value, yet there is a considerable dispersion in the distribution. Orientation variations within the jet cannot fully account for the dispersion, implying that the features have a range of Lorentz factor and/or pattern speed. Very slow pattern speed features are rare, comprising only 4% of the sample, and are more prevalent in radio galaxy and BL Lac jets. We confirm a previously reported upper envelope to the distribution of speed versus beamed luminosity for moving jet features. Below 10{sup 26} W Hz{sup –1} there is a fall-off in maximum speed with decreasing 15 GHz radio luminosity. The general shape of the envelope implies that the most intrinsically powerful AGN jets have a wide range of Lorentz factors up to ∼40, while intrinsically weak jets are only mildly relativistic.

79 ASTRONOMY AND ASTROPHYSICS↗

THE PATTERN SPEEDS OF NGC 3031, NGC 2366, AND DDO 154 AS FUNCTIONS OF RADIUS

The pattern speeds of NGC 3031, NGC 2366, and DDO 154 are measured using a solution of the Tremaine-Weinberg equations derived in a previous paper. Four different data sets of NGC 3031 produce consistent results despite differences in angular resolution, spectral resolution, and sensitivities to structures on different scales. The results for NGC 3031 show that the pattern speed is more similar to the material speed than it is to the speed of a rigidly rotating pattern, and that there are no clear indications of unique corotation or Lindblad resonances. Unlike NGC 3031, the results for NGC 2366 and DDO 154 show clear departures from the material speed. The results for NGC 2366 and DDO 154 also show that the solution method can produce meaningful results that are simple to interpret even if there is not a coherent or well-defined pattern in the data. The angular resolution of a data set has the greatest affect on the results, especially for determining the radial behavior of the pattern speed, and whether there is a single, global pattern speed.

79 ASTRONOMY AND ASTROPHYSICS↗

Rupture Jumping and Seismic Complexity in Models of Earthquake Cycles for Fault Stepovers with Off-Fault Plasticity

ABSTRACT Fault stepovers are prime examples of geometric complexity in natural fault zones that may affect seismic hazard by determining whether an earthquake rupture continues propagating or abruptly stops. However, the long-term pattern of seismicity near-fault stepovers and underlying mechanisms of rupture jumping in the context of earthquake cycles are rarely studied. Leveraging a hybrid numerical scheme combining the finite element and the spectral boundary integral methods, FEBE, we carry out fully dynamic simulations of sequences of earthquakes and aseismic slip for both compressive and tensile stepovers with off-fault plasticity. We consider a rate-and-state friction law for the fault friction and pressure-sensitive Drucker–Prager plasticity for the off-fault bulk response. We observe that the accumulation of plastic deformation, an indication of off-fault damage, is significantly different in the two cases, with more plastic deformation projected in the overlapping region for the tensile stepover. The seismic pattern for a tensile stepover is more complex than for a compressive stepover, and incorporating plasticity also increases complexity, relative to the elastic case. A tensile stepover with off-fault plasticity shows rupture segmentation, temporal clustering, and frequent rupture jumping from one fault to another. These results shed light on possible mechanisms of rupture jumping in fault stepovers as well as the long-term evolution of the fault zone.

Geochemistry & Geophysics↗

BLOB: An unsupervised clustering approach to spatial preprocessing of MSS imagery

A basic concept of Multispectral Scanner data processing was developed for use in agricultural inventories; namely, to introduce spatial coordinates of each pixel into the vector description of the pixel and to use this information along with the spectral channel values in a conventional unsupervised clustering of the scene. The result is to isolate spectrally homogeneous field-like patches (called blobs). The spectral mean vector of a blob can be regarded as a defined feature and used in a conventional pattern recognition procedure. The benefits of use are: ease in locating training units in imagery; data compression of from 10 to 30 depending on the application; reduction of scanner noise and consequently potential improvements in classification/proportion estimation performances.

Kauth, R. J.↗

Blob - An unsupervised clustering approach to spatial preprocessing of MSS imagery

A basic concept of MSS data processing has been developed for use in agricultural inventories; namely, to introduce spatial coordinates of each pixel into the vector description of the pixel and to use this information along with the spectral channel values in a conventional unsupervised clustering of the scene. The result is to isolate spectrally homogeneous field-like patches (called 'blobs'). The spectral mean vector of a blob can be regarded as a defined feature and used in a conventional pattern recognition procedure. The benefits of use are: ease in locating training units in imagery; data compression of from 10 to 30 depending on the application; reduction of scanner noise and consequently potential improvements in classification/proportion estimation performances.

Kauth, R. J.↗

Feed System Design Considerations for Large Space Antenna Systems. Part 2: Single Aperture with Overlapping Feeds

Contiguous multiple beams are used to make use of the set of frequency bands at different beams at different geographical locations and achieve the most efficient use of precious frequency allocation. This is feasible only if the interference among cochannel beams is below some acceptable level, by carrier/interference (C/I) ratio. Individual beam patterns of very low sidelobes, which in turn necessitates narrow feed are required. A physically realizable solution to this problem entails either more than one reflector, more complicated optics, or breaking of each feed into a cluster of smaller elements, some of which would then be shared by adjacent beams. The latter, however, requires a complicated beamforming network (BFN) for the proper feeding of the elements. The feedpacking problem is not unique to reflector antennas and exists in lens type antennas as well. The BFN and associated problems are present in the phased array antennas and on a much larger scale. Poor scan capabilities are associated with reflector systems. The scan properties of offset fed reflector systems can be improved by choosing a very large focal length to parent reflector diameter ((F/Dp) ratio, which requires a longer boom to support the feed. In the case of reflectors with cluster feed arrangements, the scan capability for smaller F/Dp ratios is improved by proper adjustment of cluster element excitations. Such a system seems to be appropriate for up to 10 beamwidths scan. For a larger number of beams, systems with wider scan capabilities, such as phased arrays or phased array/reflector combinations, become more appealing.

Jamnejad, V.↗

Atomic-scale probing of short-range order and its impact on electrochemical properties in cation-disordered oxide cathodes

Abstract Chemical short-range-order has been widely noticed to dictate the electrochemical properties of Li-excess cation-disordered rocksalt oxides, a class of cathode based on earth abundant elements for next-generation high-energy-density batteries. Existence of short-range-order is normally evidenced by a diffused intensity pattern in reciprocal space, however, derivation of local atomic arrangements of short-range-order in real space is hardly possible. Here, by a combination of aberration-corrected scanning transmission electron microscopy, electron diffraction, and cluster-expansion Monte Carlo simulations, we reveal the short-range-order is a convolution of three basic types: tetrahedron, octahedron, and cube. We discover that short-range-order directly correlates with Li percolation channels, which correspondingly affects Li transport behavior. We further demonstrate that short-range-order can be effectively manipulated by anion doping or post-synthesis thermal treatment, creating new avenues for tailoring the electrochemical properties. Our results provide fundamental insights for decoding the complex relationship between local chemical ordering and properties of crystalline compounds.

25 ENERGY STORAGE↗

Communication: He-tagged vibrational spectra of the SarGlyH{sup +} and H{sup +}(H{sub 2}O){sub 2,3} ions: Quantifying tag effects in cryogenic ion vibrational predissociation (CIVP) spectroscopy

To assess the degree to which more perturbative, but widely used “tag” species (Ar, H{sub 2}, Ne) affect the intrinsic band patterns of the isolated ions, we describe the extension of mass-selective, cryogenic ion vibrational spectroscopy to the very weakly interacting helium complexes of three archetypal ions: the dipeptide SarGlyH{sup +} and the small protonated water clusters: H{sup +}(H{sub 2}O){sub 2,3}, including the H{sub 5}O{sub 2}{sup +} “Zundel” ion. He adducts were generated in a 4.5 K octopole ion trap interfaced to a double-focusing, tandem time-of-flight photofragmentation mass spectrometer to record mass-selected vibrational predissociation spectra. The H{sub 2} tag-induced shift (relative to that by He) on the tag-bound NH stretch of the SarGlyH{sup +} spectrum is quite small (12 cm{sup −1}), while the effect on the floppy H{sub 5}O{sub 2}{sup +} ion is more dramatic (125 cm{sup −1}) in going from Ar (or H{sub 2}) to Ne. The shifts from Ne to He, on the other hand, while quantitatively significant (maximum of 10 cm{sup −1}), display the same basic H{sub 5}O{sub 2}{sup +} band structure, indicating that the He-tagged H{sub 5}O{sub 2}{sup +} spectrum accurately represents the delocalized nature of the vibrational zero-point level. Interestingly, the He-tagged spectrum of H{sup +}(H{sub 2}O){sub 3} reveals the location of the non-bonded OH group on the central H{sub 3}O{sup +} ion to fall between the collective non-bonded OH stretches on the flanking water molecules in a position typically associated with a neutral OH group.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Identifying structural changes with unsupervised machine learning methods

In this work, unsupervised machine learning methods are used to identify structural changes using the melting point transition in classical molecular dynamics simulations as an example application of the approach. Dimensionality reduction and clustering methods are applied to instantaneous radial distributions of atomic configurations from classical molecular dynamics simulations of metallic systems over a large temperature range. Principal component analysis is used to dramatically reduce the dimensionality of the feature space across the samples using an orthogonal linear transformation that preserves the statistical variance of the data under the condition that the new feature space is linearly independent. From there, k-means clustering is used to partition the samples into solid and liquid phases through a criterion motivated by the geometry of the reduced feature space of the samples, allowing for an estimation of the melting point transition. This pattern criterion is conceptually similar to how humans interpret the data but with far greater throughput, as the shapes of the radial distributions are different for each phase and easily distinguishable by humans. The transition temperature estimates derived from this machine learning approach produce comparable results to other methods on similarly small system sizes. These results show that machine learning approaches can be applied to structural changes in physical systems.

42 ENGINEERING↗

Short-Range Order in α-FeAl Soft Magnetic Alloy

The atomic structure of iron–aluminum alloy samples containing about 7 at % of aluminum (α region of the phase diagram) was investigated by X-ray diffraction. The samples were annealed in the paramagnetic (T > {sup T}{sub C}) and ferromagnetic (T < T{sub C}) states. In the first case, the structural state was fixed by quenching from the annealing temperature in water, and, in the second case, by slow cooling. Diffraction patterns of single-crystal samples were taken on an X-ray four-circle diffractometer. It is shown that local ordering, regardless of the prehistory of a sample, is a combination of B2-phase clusters (the CsCl type structure), which were previously found in iron–silicon alloys with Si content up to 10%, and small regions with D0{sub 3} short-range order. The former consist of two B2-cells having a common face, while the latter consist predominantly of one unit cell of the D0{sub 3}-phase. Within the accuracy of the experiment, no significant difference in the structural states in the paramagnetic and ferromagnetic phases was observed.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Connecting Network Properties of Rapidly Disseminating Epizoonotics

Background: To effectively control the geographical dissemination of infectious diseases, their properties need to be determined. To test that rapid microbial dispersal requires not only susceptible hosts but also a pre-existing, connecting network, we explored constructs meant to reveal the network properties associated with disease spread, which included the road structure. Methods: Using geo-temporal data collected from epizoonotics in which all hosts were susceptible (mammals infected by Foot-and-mouth disease virus, Uruguay, 2001; birds infected by Avian Influenza virus H5N1, Nigeria, 2006), two models were compared: 1) ‘connectivity’, a model that integrated bio-physical concepts (the agent’s transmission cycle, road topology) into indicators designed to measure networks (‘nodes’ or infected sites with short- and long-range links), and 2) ‘contacts’, which focused on infected individuals but did not assess connectivity. Results: The connectivity model showed five network properties: 1) spatial aggregation of cases (disease clusters), 2) links among similar ‘nodes’ (assortativity), 3) simultaneous activation of similar nodes (synchronicity), 4) disease flows moving from highly to poorly connected nodes (directionality), and 5) a few nodes accounting for most cases (a ‘‘20:800 pattern). In both epizoonotics, 1) not all primary cases were connected but at least one primary case was connected, 2) highly connected, small areas (nodes) accounted for most cases, 3) several classes of nodes were distinguished, and 4) the contact model, which assumed all primary cases were identical, captured half the number of cases identified by the connectivity model. When assessed together, the synchronicity and directionality properties explained when and where an infectious disease spreads. Conclusions: Geo-temporal constructs of Network Theory’s nodes and links were retrospectively validated in rapidly disseminating infectious diseases. They distinguished classes of cases, nodes, and networks, generating information usable to revise theory and optimize control measures. Prospective studies that consider pre-outbreak predictors, such as connecting networks, are recommended.

59 BASIC BIOLOGICAL SCIENCES↗

CNO abundances in the quintuplet cluster M supergiant 5-7

We present and analyze infrared spectra of the supergiant VR 5-7, in the Quintuplet cluster 30 pc from the Galactic center. Within the uncertainties, the [C/H],[N/H], and [O/H] abundances in this star are equal of Ori, a star which exhibits mixing of CNO processed elements, but distinct from the abundance patterns in IRS 7.

stars Galactic Center↗

Growth and characterization of cubic and non-cubic Ge nanocrystals

Germanium nanocrystals with tetragonal (ST-12) and diamond like cubic (Ge-I) phases have been selectively grown by controlling the ionization and electrostatic potential of Ge clusters in an ion cluster beam deposition system. Predominantly tetragonal nanocrystals were obtained when grown using neutral clusters. The percentage of cubic phase increased when grown by ionizing the clusters and accelerating them towards substrates by applying electrostatic bias in the range of 1.5 –2.5 kV. Raman spectroscopic measurement showed strong peak at 275 cm{sup −1} and 300 cm{sup −1} for tetragonal and cubic Ge nanocrystals, respectively. TEM measurements showed crystalline lattice fringes of both type of the nanocrystals. The selected area electron diffraction patterns showed (111) and (210) as the dominating lattice planes for tetragonal nanocrystals while the cubic phases had (111), (311) and (331) as the prominent lattice planes. The optical absorption edge redshifted from 1.75 to 1.55 eV as the percentage of the cubic phases increased in the NC composition in the composite film.

36 MATERIALS SCIENCE↗

Formation, gravitational clustering, and interactions of nonrelativistic solitons in an expanding universe

We investigate the formation, gravitational clustering and interactions of solitons in a self-interacting, non-relativistic scalar field in an expanding universe. Rapid formation of large number of solitons is driven by attractive self-interactions of the field, whereas the slower clustering of solitons is driven by gravitational forces. Driven closer together by gravity, we see a rich plethora of dynamics in the soliton "gas" including mergers, scatterings and formation of soliton binaries. Here, the numerical simulations are complemented by analytic calculations and estimates of (i) the relevant instability length and time scales, (ii) individual soliton profiles and their stability, (iii) number density of produced solitons, and (iv) the two point correlation function of soliton positions as evidence for gravitational clustering.

79 ASTRONOMY AND ASTROPHYSICS↗

Current Structure and Nonideal Behavior at Magnetic Null Points in the Turbulent Magnetosheath

The Poincaré index indicates that the Cluster spacecraft tetrahedron entraps a number of 3-D magnetic nulls during an encounter with the turbulent magnetosheath. Previous researchers have found evidence for reconnection at one of the many filamentary current layers observed by Cluster in this region. We find that many of the entrained nulls are also associated with strong currents. We dissect the current structure of a pair of spiral nulls that may be topologically connected. At both nulls, we find a strong current along the spine, accompanied by a somewhat more modest current perpendicular to the spine that tilts the fan toward the axis of the spine. The current along the fan is comparable to the that along the spine. At least one of the nulls manifests a rotational flow pattern in the fan plane that is consistent with torsional spine reconnection as predicted by theory. These results emphasize the importance of examining the magnetic topology in interpreting the nature of currents and reconnection in 3-D turbulence.

cluster↗

Dual Channel Dual Staging: Hierarchical and Portable Staging for GPU-Based In-Situ Workflow

In-situ workflows have emerged as an attractive approach for addressing data movement challenges at very large scales. Since GPU-based architectures dominate the HPC landscapes, porting these in-situ workflows, and, specifically, the inter-application data exchange, to GPU-based systems can be challenging. Technologies such as GPUDirect RDMA (GDR), which is typically used for I/O in GPU applications as an optimization that circumvents the CPU overhead, can be leveraged to support bulk data exchanges between GPU applications. However, current GDR design often lacks performance portability across HPC clusters built with different hardware configurations. Furthermore, the local CPU may also be effectively used as an auxiliary communication mechanism to offload data exchanges. In this paper, we present a dual channel dual staging approach for efficient, scalable, and performance-portable inter-application data exchange for in-situ workflows. This approach exploits the data access pattern within in-situ workflows along with the inherent execution asynchrony to accelerate data exchanges and, at the same time, improve performance portability. Specifically, the dual channel dual staging method leverages both the local CPU and the remote data staging server to build a hierarchical joint staging area and uses this staging area to transform blocking inter-application bulk data exchanges into best-effort local data movements between GPU and CPU. The dual channel dual staging is implemented as a portability extension of the Dataspaces-GPU staging framework. We present an experimental evaluation of its performance, portability, and scalability using this implementation on three leadership GPU clusters. The evaluation results demonstrate that the dual channel dual staging method saves up to 75% in data-exchange time compared to host-based, GDR, and alternate portable designs, while maintaining scalability (up to 512 GPUs) and performance portability across the three platforms.

Zhang, Bo [University of Utah]↗

Single-cell RNA sequencing of batch Chlamydomonas cultures reveals heterogeneity in their diurnal cycle phase

The photosynthetic unicellular alga Chlamydomonas (Chlamydomonas reinhardtii) is a versatile reference for algal biology because of its ease of culture in the laboratory. Genomic and systems biology approaches have previously described transcriptome responses to environmental changes using bulk data, thus representing the average behavior from pools of cells. Here, we apply single-cell RNA sequencing (scRNA-seq) to probe the heterogeneity of Chlamydomonas cell populations under three environments and in two genotypes differing by the presence of a cell wall. First, we determined that RNA can be extracted from single algal cells with or without a cell wall, offering the possibility to sample natural algal communities. Second, scRNA-seq successfully separated single cells into nonoverlapping cell clusters according to their growth conditions. Cells exposed to iron or nitrogen deficiency were easily distinguished despite a shared tendency to arrest photosynthesis and cell division to economize resources. Notably, these groups of cells not only recapitulated known patterns observed with bulk RNA-seq but also revealed their inherent heterogeneity. A substantial source of variation between cells originated from their endogenous diurnal phase, although cultures were grown in constant light. We exploited this result to show that circadian iron responses may be conserved from algae to land plants. We document experimentally that bulk RNA-seq data represent an average of typically hidden heterogeneity in the population.

59 BASIC BIOLOGICAL SCIENCES↗

Ab Initio Study of the Beryllium Isotopes 7 Be to 12 Be

We present a systematic ab initio study of the low-lying states in beryllium isotopes from 7 Be to 12 Be using nuclear lattice effective field theory with the N 3 ⁢LO interaction. Our calculations achieve good agreement with experimental data for energies, radii, and electromagnetic properties. We introduce a novel, model-independent method to quantify nuclear shapes, uncovering a distinct pattern in the interplay between positive and negative parity states across the isotopic chain. By combining Monte Carlo sampling of the many-body density operator with a novel nucleon-grouping algorithm, the prominent two-center cluster structures, the emergence of one-neutron halo, complex nuclear molecular dynamics such as 𝜋 orbital and 𝜎 orbital, emerge naturally.

binding energy & masses↗