pnnl/biota
Fortran 90 source code and an example problem for the Toolkit for Integrated Impact Assessments (TIIA).
Napier, Bruce↗
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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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tether
Tether is a python module for benchmarking and assessing large language model (LLMs) performance at generic scientific tasks. The code generates benchmarks, uses the benchmark to prompt LLMs through automatic programming interfaces (APIs), and then logs the number of prompts an LLM correctly answers and presents the results as a completed benchmark.
Kaiser, Bryan [Los Alamos National Laboratory]↗
Replacing non-biomedical concepts improves embedding of biomedical concepts
Embeddings are semantically meaningful representations of words in a vector space, commonly used to enhance downstream machine learning applications. Traditional biomedical embedding techniques often replace all synonymous words representing biological or medical concepts with a unique token, ensuring consistent representation and improving embedding quality. However, the potential impact of replacing non-biomedical concept synonyms has received less attention. Embedding approaches often employ concept replacement to replace concepts that span multiple words, such as non-small-cell lung carcinoma, with a single concept identifier (e.g., D002289). Also, all synonyms of each concept are merged into the same identifier. Here, we additionally leveraged WordNet to identify and replace sets of non-biomedical synonyms with their most common representatives. This combined approach aimed to reduce embedding noise from non-biomedical terms while preserving the integrity of biomedical concept representations. We applied this method to 1,055 biomedical concept sets representing molecular signatures or medical categories and assessed the mean pairwise distance of embeddings with and without non-biomedical synonym replacement. A smaller mean pairwise distance was interpreted as greater intra-cluster coherence and higher embedding quality. Embeddings were generated using the Word2Vec algorithm applied to a corpus of 10 million PubMed abstracts. Our results demonstrate that the addition of non-biomedical synonym replacement reduced the mean intra-cluster distance by an average of 8%, suggesting that this complementary approach enhances embedding quality. Future work will assess its applicability to other embedding techniques and downstream tasks. Python code implementing this method is provided under an open-source license.
algorithms↗
Corkscrew Motion of an Electron Beam due to Coherent Variations in Accelerating Potentials
Corkscrew motion results from the interaction of fluctuations of beam electron energy with accidental magnetic dipoles caused by misalignment of the beam transport solenoids. Corkscrew is a serious concern for high-current linear induction accelerators (LIA). A simple scaling law for corkscrew amplitude derived from a theory based on a constant-energy beam coasting through a uniform magnetic field has often been used to assess LIA vulnerability to this effect. We use a beam dynamics code to verify that this scaling also holds for an accelerated beam in a non-uniform magnetic field, as in a real accelerator. Results of simulations with this code are strikingly similar to measurements on one of the LIAs at Los Alamos National Laboratory.
43 PARTICLE ACCELERATORS↗
Initial study of notch sensitivity of Grade 91 using mechanisms motivated crystal plasticity finite element method
This report describes the development of a crystal plasticity finite element method (CPFEM) model for the multiaxial creep rupture of Grade 91 steel. The report demonstrates that core blocks in heat pipe reactor designs will see significantly different stress states than those typically found in conventional advanced reactor components where structures can often be represented as thin-walled pressure vessels. Current design practice uses effective stress measures calibrated to biaxial creep test data to account for the effect of stress multiaxiality on rupture life. Because these models rely on biaxial data they may not be accurate for the truly 3D, triaxial states found in heat pipe microreactor core blocks. A physically-based model, like the CPFEM model developed here, may be able to more accurately represent creep rupture under triaxial stresses when compared to conventional, empirical methods. This report describes the development, implementation, and validation of such a model and then applies the model to predict the effect of stress triaxiality on rupture in Grade 91 steel. The model results are used to assess the effective stress measures currently used in high temperature design codes and makes specific recommendations on improving these effective stresses to better account for the effect of 3D stress states on rupture in Grade 91. The validation and then implementation of these recommendations in design codes and standards could lead to safer, more effective heat pipe microreactor core block designs.
36 MATERIALS SCIENCE↗
Benchmark Specification of Advanced Burner Test Reactor
As an effort to assess the Argonne Reactor Computation (ARC) suite of fast reactor analysis codes, a numerical benchmark problem was developed using the reference 250 MWt Advanced Burner Test Reactor (ABTR) metallic core fueled with beginning of equilibrium cycle compositions (Chang et al., 2006). Material thermal expansion at operating condition was modeled by adjusting the hexagonal pitch, axial meshes, and the fuel and structure material densities appropriately. Irradiation swelling of metal fuel was considered, and the bond sodium was displaced into the lower part of fission gas plenum.
22 GENERAL STUDIES OF NUCLEAR REACTORS↗
OC6 Project Phase IV: Validation of Numerical Models for Novel Floating Offshore Wind Support Structures
The fourth phase of the Offshore Code Comparison, Collaboration, Continued, with Correlation and unCertainty (OC6) aims to assess the ability of the tools to model a novel floating wind design. The design that was selected for this project is the TetraSpar designed by Stiesdal Offshore Technologies. The platform is a unique design that features a spar like stability with a very low center of gravity, but does not require deep-water ports. This combination is achieved with a system made of two separate steel structures, a hull at the water’s surface that supports the wind turbine tower, and a keel that is suspended below the main body. This lower keel has a very high density and drives the total platform’s low center of gravity. Scaled model tests of the TetraSpar design were performed in 2018-2019 by the University of Maine. The tests were performed with 1:43 Froude scaling. The data collected in the model tests provide a detailed description of the response of the platform in various controlled and relatively well understood conditions. Comparison with these data provides a good opportunity for validation of numerical models. The OC6 Phase IV work will focus on the specific parameters used in these scaled model tests. The load cases (LC) considered in this project are as follows: LC 1.X - Equilibrium and Static Offset Tests LC 2.X - Platform Free Decays LC 3.X - Turbine Thrust (Wind Only) LC 4.X - Regular and Irregular Waves (Wave only) LC 5.X - Combined Wind and Wave Loading
17 WIND ENERGY↗
Deoptimization of FMDV P1 Region Results in Robust Serotype-Independent Viral Attenuation
Foot-and-mouth disease (FMD), caused by the FMD virus (FMDV), is a highly contagious disease of cloven-hoofed livestock that can have severe economic impacts. Control and prevention strategies, including the development of improved vaccines, are urgently needed to effectively control FMD outbreaks in endemic settings. Previously, we employed two distinct strategies (codon pair bias deoptimization (CPD) and codon bias deoptimization (CD)) to deoptimize various regions of the FMDV serotype A subtype A12 genome, which resulted in the development of an attenuated virus in vitro and in vivo, inducing varying levels of humoral responses. In the current study, we examined the versatility of the system by using CPD applied to the P1 capsid coding region of FMDV serotype A subtype, A24, and another serotype, Asia1. Viruses carrying recoded P1 (A24-P1Deopt or Asia1-P1Deopt) exhibited different degrees of attenuation (i.e., delayed viral growth kinetics and replication) in cultured cells. Studies in vivo using a mouse model of FMD demonstrated that inoculation with the A24-P1Deopt and Asia1-P1Deopt strains elicited a strong humoral immune response capable of offering protection against challenge with homologous wildtype (WT) viruses. However, different results were obtained in pigs. While clear attenuation was detected for both the A24-P1Deopt and Asia1-P1Deopt strains, only a limited induction of adaptive immunity and protection against challenge was detected, depending on the inoculated dose and serotype deoptimized. Our work demonstrates that while CPD of the P1 coding region attenuates viral strains of multiple FMDV serotypes/subtypes, a thorough assessment of virulence and induction of adaptive immunity in the natural host is required in each case in order to finely adjust the degree of deoptimization required for attenuation without affecting the induction of protective adaptive immune responses.
60 APPLIED LIFE SCIENCES↗
On the false lock behavior of polarity-type Costas loops with Manchester coded input
A modification of a Costas loop is described, and the false lock behavior of this system is studied. The modified Costas loop hard limits the output of the in-phase channel, replaces the analog multiplier with a chopper-type device, and is equipped with single-pole arm filters in the loop. The false lock behavior associated with the use of Manchester coded data is investigated; the results can be applied to the assessment of the false lock margin on the Ku-band uplink to the Space Shuttle Orbiter through the TURSS.
Simon, M. K.↗
The cleanroom case study in the Software Engineering Laboratory: Project description and early analysis
This case study analyzes the application of the cleanroom software development methodology to the development of production software at the NASA/Goddard Space Flight Center. The cleanroom methodology emphasizes human discipline in program verification to produce reliable software products that are right the first time. Preliminary analysis of the cleanroom case study shows that the method can be applied successfully in the FDD environment and may increase staff productivity and product quality. Compared to typical Software Engineering Laboratory (SEL) activities, there is evidence of lower failure rates, a more complete and consistent set of inline code documentation, a different distribution of phase effort activity, and a different growth profile in terms of lines of code developed. The major goals of the study were to: (1) assess the process used in the SEL cleanroom model with respect to team structure, team activities, and effort distribution; (2) analyze the products of the SEL cleanroom model and determine the impact on measures of interest, including reliability, productivity, overall life-cycle cost, and software quality; and (3) analyze the residual products in the application of the SEL cleanroom model, such as fault distribution, error characteristics, system growth, and computer usage.
Green, Scott↗
Coupled multi-disciplinary simulation of composite engine structures in propulsion environment
A computational simulation procedure is described for the coupled response of multi-layered multi-material composite engine structural components which are subjected to simultaneous multi-disciplinary thermal, structural, vibration, and acoustic loadings including the effect of hostile environments. The simulation is based on a three dimensional finite element analysis technique in conjunction with structural mechanics codes and with acoustic analysis methods. The composite material behavior is assessed at the various composite scales, i.e., the laminate/ply/constituents (fiber/matrix), via a nonlinear material characterization model. Sample cases exhibiting nonlinear geometrical, material, loading, and environmental behavior of aircraft engine fan blades, are presented. Results for deformed shape, vibration frequency, mode shapes, and acoustic noise emitted from the fan blade, are discussed for their coupled effect in hot and humid environments. Results such as acoustic noise for coupled composite-mechanics/heat transfer/structural/vibration/acoustic analyses demonstrate the effectiveness of coupled multi-disciplinary computational simulation and the various advantages of composite materials compared to metals.
Chamis, Christos C.↗
Coupled multi-disciplinary simulation of composite engine structures in propulsion environment
A computational simulation procedure is described for the coupled response of multi-layered multi-material composite engine structural components which are subjected to simultaneous multi-disciplinary thermal, structural, vibration, and acoustic loadings including the effect of hostile environments. The simulation is based on a three dimensional finite element analysis technique in conjunction with structural mechanics codes and with acoustic analysis methods. The composite material behavior is assessed at the various composite scales, i.e., the laminate/ply/constituents (fiber/matrix), via nonlinear material characterization model. Sample cases exhibiting nonlinear geometrical, material, loading, and environmental behavior of aircraft engine fan blades, are presented. Results for deformed shape, vibration frequency mode shapes, and acoustic noise emitted from the fan blade, are discussed for their coupled effect in hot and humid environments. Results such as acoustic noise for coupled composite-mechanics/heat transfer/structural/vibration/acoustic analyses demonstrate the effectiveness of coupled multi-disciplinary computational simulation the various advantages of composite materials compared to metals.
Chamis, Christos C.↗
Thermal analysis of combinatorial solid geometry models using SINDA
Algorithms have been developed using Monte Carlo techniques to determine the thermal network parameters necessary to perform a finite difference analysis on Combinatorial Solid Geometry (CSG) models. Orbital and laser fluxes as well as internal heat generation are modeled to facilitate satellite modeling. The results of the thermal calculations are used to model the infrared (IR) images of targets and assess target vulnerability. Sample analyses and validation are presented which demonstrate code products.
Gerencser, Diane↗
Developing a workstation-based, real-time simulation for rapid handling qualities evaluations during design
This paper describes the Rapid Aircraft DynamIcs AssessmeNt (RADIAN) project - an integration of the Aircraft SYNThesis (ACSTNT) design code with the USAD DATCOM code that estimates stability derivatives. Both of these codes are available to universities. These programs are then linked to flight simulation and flight controller synthesis tools and resulting design is evaluated on a graphics workstation. The entire process reduces the preliminary design time by an order of magnitude and provides an initial handling qualities evaluation of the design coupled to a control law. The integrated design process is applicable to both conventional aircraft taken from current textbooks and to unconventional designs emphasizing agility and propulsive control of attitude. The interactive and concurrent nature of the design process has been well received by industry and by design engineers at NASA. The process is being implemented into the design curriculum and is being used by students who view it as a significant advance over prior methods.
Anderson, Frederick↗
Hardware independence checkout software
ACSI has developed a program utilizing CLIPS to assess compliance with various programming standards. Essentially the program parses C code to extract the names of all function calls. These are asserted as CLIPS facts which also include information about line numbers, source file names, and called functions. Rules have been devised to establish functions called that have not been defined in any of the source parsed. These are compared against lists of standards (represented as facts) using rules that check intersections and/or unions of these. By piping the output into other processes the source is appropriately commented by generating and executing parsed scripts.
Cameron, Barry W.↗
A Computer Code for Gas Turbine Engine Weight And Disk Life Estimation
Reliable engine-weight estimation at the conceptual design stage is critical to the development of new aircraft engines. It helps to identify the best engine concept amongst several candidates. In this paper, the major enhancements to NASA's engine-weight estimate computer code (WATE) are described. These enhancements include the incorporation of improved weight-calculation routines for the compressor and turbine disks using the finite-difference technique. Furthermore, the stress distribution for various disk geometries was also incorporated, for a life-prediction module to calculate disk life. A material database, consisting of the material data of most of the commonly-used aerospace materials, has also been incorporated into WATE. Collectively, these enhancements provide a more realistic and systematic way to calculate the engine weight. They also provide additional insight into the design trade-off between engine life and engine weight. To demonstrate the new capabilities, the enhanced WATE code is used to perform an engine weight/life trade-off assessment on a production aircraft engine.
Tong, Michael T.↗
An Engine Research Program Focused on Low Pressure Turbine Aerodynamic Performance
A comprehensive test program was performed in the Propulsion Systems Laboratory at the NASA Glenn Research Center, Cleveland Ohio using a highly instrumented Pratt and Whitney Canada PW 545 turbofan engine. A key objective of this program was the development of a high-altitude database on small, high-bypass ratio engine performance and operability. In particular, the program documents the impact of altitude (Reynolds Number) on the aero-performance of the low-pressure turbine (fan turbine). A second objective was to assess the ability of a state-of-the-art CFD code to predict the effect of Reynolds number on the efficiency of the low-pressure turbine. CFD simulation performed prior and after the engine tests will be presented and discussed. Key findings are the ability of a state-of-the art CFD code to accurately predict the impact of Reynolds Number on the efficiency and flow capacity of the low-pressure turbine. In addition the CFD simulations showed the turbulent intensity exiting the low-pressure turbine to be high (9%). The level is consistent with measurements taken within an engine.
Castner, Raymond↗
Application of the ASP3D Computer Program to Unsteady Aerodynamic and Aeroelastic Analyses
A new computer program has been developed called ASP3D (Advanced Small Perturbation - 3D), which solves the small perturbation potential flow equation in an advanced form including mass-consistent surface and trailing wake boundary conditions, and entropy, vorticity, and viscous effects. The purpose of the program is for unsteady aerodynamic and aeroelastic analyses, especially in the nonlinear transonic flight regime. The program exploits the simplicity of stationary Cartesian meshes with the movement or deformation of the configuration under consideration incorporated into the solution algorithm through a planar surface boundary condition. The paper presents unsteady aerodynamic and aeroelastic applications of ASP3D to assess the time dependent capability and demonstrate various features of the code.
Batina, John T.↗