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At least 91 records · Page 5

Compound-specific isotopic analyses: a novel tool for reconstruction of ancient biogeochemical processes

Patterns of isotopic fractionation in biogeochemical processes are reviewed and it is suggested that isotopic fractionations will be small when substrates are large. If so, isotopic compositions of biomarkers will reflect those of their biosynthetic precursors. This prediction is tested by consideration of results of analyses of geoporphyrins and geolipids from the Greenhorn Formation (Cretaceous, Western Interior Seaway of North America) and the Messel Shale (Eocene, lacustrine, southern Germany). It is shown (i) that isotopic compositions of porphyrins that are related to a common source, but which have been altered structurally, cluster tightly and (ii) that isotopic differences between geolipids and porphyrins related to a common source are equal to those observed in modern biosynthetic products. Both of these observations are consistent with preservation of biologically controlled isotopic compositions during diagenesis. Isotopic compositions of individual compounds can thus be interpreted in terms of biogeochemical processes in ancient depositional environments. In the Cretaceous samples, isotopic compositions of n-alkanes are covariant with those of total organic carbon, while delta values for pristane and phytane are covariant with those of porphyrins. In this unit representing an open marine environment, the preserved acyclic polyisoprenoids apparently derive mainly from primary material, while the extractable, n-alkanes derive mainly from lower levels of the food chain. In the Messel Shale, isotopic compositions of individual biomarkers range from -20.9 to -73.4% vs PDB. Isotopic compositions of specific compounds can be interpreted in terms of origin from methylotrophic, chemautotrophic, and chemolithotrophic microorganisms as well as from primary producers that lived in the water column and sediments of this ancient lake.

Non-NASA Center↗

Investigations of Methane Production in Hypersaline Environments

The recent reports of methane in the atmosphere of Mars, as well as the findings of hypersaline paleo-environments on that planet, have underscored the need to evaluate the importance of biological (as opposed to geological) trace gas production and consumption. Methane in the atmosphere of Mars may be an indication of life but might also be a consequence of geologic activity and/or the thermal alteration of ancient organic matter. Hypersaline environments have now been reported to be extremely likely in several locations in our solar system, including: Mars, Europa, and Enceladus. Modern hypersaline microbial mat communities, (thought to be analogous to those present on the early Earth at a period of time when Mars was experiencing very similar environmental conditions), have been shown to produce methane. However, very little is known about the physical and/or biological controls imposed upon the rates at which methane, and other important trace gases, are produced and consumed in these environments. We describe here the results of our investigations of methane production in hypersaline environments, including field sites in Chile, Baja California Mexico, California, USA and the United Arab Emirates. We have measured high concentrations of methane in bubbles of gas produced both in the sediments underlying microbial mats, as well as in areas not colonized by microbial mats in the Guerrero Negro hypersaline ecosystem, Baja California Mexico, in Chile, and in salt ponds on the San Francisco Bay. The carbon isotopic (δ13C) composition of the methane in the bubbles exhibited an extremely wide range of values, (ca. -75 per mille ca. -25 per mille). The hydrogen isotopic composition of the methane (δ2H) ranged from -60 to -30per mille and -450 to -350per mille. These isotopic values are outside of the range of values normally considered to be biogenic, however incubations of the sediments in contact with these gas bubbles reveals that the methane is indeed being produced by these sediments. Substrate limitation of methanogenesis in these environments, and not methane oxidation, would explain the isotopic values of the methane in these environments. Incubations with both isotopically labeled and unlabeled putative substrates for methanogenesis have shown that the substrates most important for methanogenesis in these environments are the so-called non-competitive substrates, e.g., methylamines, dimethylsulfide, and methanol. Acetate and bicarbonate appear not to be important substrates for methanogens in these environments. Extraction of DNA and analysis of a gene used for methane production (mcrA) has revealed that the community composition of methanogens is consistent with organisms known to use non-competitive substrates. Our work has shown that hypersaline environments have the potential to both produce and preserve methane for analysis, e.g., by capable rovers. Our work expends the range of methane isotopic values now known to be produced by active methanogenesis

hypersaline paleo-environments↗

One Giant Leap to Protect All Mankind: An Overview of the Lunar Receiving Laboratory

Motivation. In 1961, President John F. Kennedy charged the nation "to land a man on the moon and return him safely to Earth." Eight years later, the Apollo 11 astronauts splashed down in the Pacific Ocean after this first 8-day journey to the moon. As humans had never ventured to another extraterrestrial body, the U.S. government noted the great uncertainty associated with the unknown exposures related to this historic mission. Overview. With this uncertainty in mind, a newly formed Interagency Committee on Back Contamination (ICBC) was established to review the potential for lunar contaminants and establish the prevention of their escape into the biosphere during crew and sample recovery operations from the floating command module to the mobile quarantine facility on the recovery ship and return to the Johnson Space Center. Significance. As a result of the ICBC recommendations, in 1966 NASA planned and built the Lunar Receiving Laboratory (LRL) at the Johnson Space Center in Houston, Texas. The LRL served a great role in service of human space exploration to quarantine Apollo crewmembers, their space vehicles, and the lunar samples collected. Almost an afterthought in the space race to the Moon, the 83,000-square-foot LRL was designed and completed in 1967 for $7.8 million. The core purpose of the LRL was "to protect the public's health, agriculture, and other living resources; to provide lunar sample distribution to approved scientific investigators; and to preserve the scientific integrity of the lunar samples at all times." Its layout was comprised of three major zones: a quarantined Crew Area, a separate but also quarantined Sample Operations Area, and a Support and Administration Area outside the controlled biological barrier. This facility required trained personnel to live and perform within it for several weeks post-flight, to include astronaut crewmembers, flight surgeons, scientists, and vehicle recovery engineers. The LRL holds memories of these historic events but has since been repurposed for NASA's medical and environmental sciences activities, in what is now known as Building 37. As we approach its 50th anniversary, the LRL story will end in demolition as NASA advances its facilities for the next steps in human exploration of space. Learning Objectives: 1. To capture the historical relevance of the NASA Lunar Receiving Laboratory 2. To understand the requirements of receiving crew and samples from the moon for the first time 3. To describe the facility capabilities in protection of public health.

Hayes, Judith↗

NASA’s Revised Planetary Protection Policy and Implementation

NASA has updated its planetary protection policy and implementation approach in response to advances in scientific understanding of solar system targets, upcoming mission opportuni-ties for exploration and sample return, and the private sector’s emerging capability to plan missions to Earth’s Moon and Mars. In September 2021, the NASA Procedural Requirements NPR 8715.24, entitled “Planetary Protection Provisions for Robotic Extraterrestrial Missions” was released which repositions planetary protection in existing NASA mission and program management structures, introduces risk-informed decision making, expands on key roles and responsibilities for both programmatic and the Oÿce of Safety and Mission Assurance, updates the categorization process and streamlines the planetary protection documentation approval and schedule. NASA is working on a more detailed technical standard to accompany NPR 8715.24 which will include the detailed technical requirements to address organic contamina-tion, inadvertent impact avoidance, biological control and management, end of mission disposal and restricted Earth-Return sample safety and assurance. This report to the COSPAR com-munity will describe the current NASA planetary protection policy and its alignment with the revised COSPAR planetary protection policy. NASA’s plans for updating the supporting “Handbook for Implementing Planetary Protection Technical Requirements” and future policies for addressing planetary protection of crewed missions will also be presented.

Elaine Seasly↗

NASA’s Revised Planetary Protection Policy and Implementation

NASA has updated its planetary protection policy and implementation approach in response to advances in scientific understanding of solar system targets, upcoming mission opportunities for exploration and sample return, and the private sector’s emerging capability to plan missions to Earth’s Moon and Mars. In September 2021, the NASA Procedural Requirements NPR 8715.24, entitled “Planetary Protection Provisions for Robotic Extraterrestrial Missions” was released which repositions planetary protection in existing NASA mission and program management structures, introduces risk-informed decision making, expands on key roles and responsibilities for both programmatic and the Office of Safety and Mission Assurance, updates the categorization process and streamlines the planetary protection documentation approval and schedule. NASA is working on a more detailed technical standard to accompany NPR 8715.24 which will include the detailed technical requirements to address organic contamination, inadvertent impact avoidance, biological control and management, end of mission disposal and restricted Earth-Return sample safety and assurance. This report to the COSPAR community will describe the current NASA planetary protection policy and its alignment with the revised COSPAR planetary protection policy. NASA’s plans for updating the supporting “Handbook for Implementing Planetary Protection Technical Requirements” and future policies for addressing planetary protection of crewed missions will also be presented.

Planetary Protection↗

NASA’s Revised Planetary Protection Policy and Implementation

NASA has updated its planetary protection policy and implementation approach in response to advances in scientific understanding of solar system targets, upcoming mission opportunities for exploration and sample return, and the private sector’s emerging capability to plan missions to Earth’s Moon and Mars. In September 2021, the NASA Procedural Requirements NPR 8715.24, entitled “Planetary Protection Provisions for Robotic Extraterrestrial Missions” was released which repositions planetary protection in existing NASA mission and program management structures, introduces risk-informed decision making, expands on key roles and responsibilities for both programmatic and the Office of Safety and Mission Assurance, updates the categorization process and streamlines the planetary protection documentation approval and schedule. NASA is working on a more detailed technical standard to accompany NPR 8715.24 which will include the detailed technical requirements to address organic contamination, inadvertent impact avoidance, biological control and management, end of mission disposal and restricted Earth-Return sample safety and assurance. This report to the COSPAR community will describe the current NASA planetary protection policy and its alignment with the revised COSPAR planetary protection policy. NASA’s plans for updating the supporting “Handbook for Implementing Planetary Protection Technical Requirements” and future policies for addressing planetary protection of crewed missions will also be presented.

Elaine Seasly↗

Methods for the conversion of fermentable sugars to ethanol

Methods and systems for the enhancement of bioproduct process yields. The present invention provides systems and methods for improvement of the carbon conversion efficiency by yeast of an organic substrate such as a fermentable sugar to a fermentation product such as ethanol. Exemplary yield-increasing/growth-inhibitory compounds include tyrosol (TyrOH), 2-phenylethanol (PheOH), and tryptophol (TrpOH). Immobilization of the yeast, such as in a porous bead or pellet, can further increase yield. Exemplary immobilization included immobilization in calcium alginate beads. The system and methods taught herein demonstrate that product yield such as ethanol yield can be improved by adding yeast yield-increasing/growth-inhibitory molecules to reduce cell growth of yeast species, such as S. cerevisiae , suggesting a strategy to improve the yield of ethanol and other yeast fermentation products by manipulating native biological control systems.

Reardon, Kenneth F.↗

Programmable temperature control system for biological materials

A system was constructed which allows programmable temperature-time control for a 5 cu cm sample volume of arbitrary biological material. The system also measures the parameters necessary for the determination of the sample volume specific heat and thermal conductivity as a function of temperature, and provides a detailed measurement of the temperature during phase change and a means of calculating the heat of the phase change. Steady-state and dynamic temperature control is obtained by supplying heat to the sample volume through resistive elements constructed as an integral part of the sample container. For cooling purposes, this container is totally immersed into a cold heat sink. Using a mixture of dry ice and alcohol at 79 C, the sample volume can be controlled from +40 to -60 C at rates from steady state to + or - 65 C/min. Steady-state temperature precision is better than 0.2 C, while the dynamic capability depends on the temperature rate of change as well as the mass of both the sample and the container.

Anselmo, V. J.↗

A chamber design for closed ecological systems research

A single-plant growth chamber is described which is closed with respect to nutrient and gas flows, in order to serve as a tool in the investigation of control over biological systems. Such control procedures are essential for the use of biological components in the development of a closed ecological life support system (CELSS). The chamber's design consists of two concentric clear plastic cylinders equipped with aeroponic feed tubing, a supporting platform for the plant and a set of sensors that includes an anemometer, thermistors, pressure and strain gauges, and humidity sensors.

Schwartzkopf, H.↗

Controlled freezing of biological samples

Apparatus consists of thermocouple connected to semiconductor reference junction. Junction is connected to amplifier that boosts signal by 1,000. High-level signal is displayed on recorder and fed into second amplifier where it is compared with signal from potentiometer of programmed dc reference in bag-temperature programer. Difference in signals indicates output voltage. Remaining circuitry provides zero-phase, time-proportion control of heaters such that heater power is directly proportional to error signal.

Cygnarowicz, T. A.↗

Mechanization and Control Concepts for Biologically Inspired Micro Aerial Vehicles

It is possible that MAV designs of the future will exploit flapping flight in order to perform missions that require extreme agility, such as rapid flight beneath a forest canopy or within the confines of a building. Many of nature's most agile flyers generate flapping motions through resonant excitation of an aeroelastically tailored structure: muscle tissue is used to excite a vibratory mode of their flexible wing structure that creates propulsion and lift. A number of MAV concepts have been proposed that would operate in a similar fashion. This paper describes an ongoing research activity in which mechanization and control concepts with application to resonant flapping MAVs are being explored. Structural approaches, mechanical design, sensing and wingbeat control concepts inspired by hummingbirds, bats and insects are examined. Experimental results from a testbed capable of generating vibratory wingbeat patterns that approximately match those exhibited by hummingbirds in hover, cruise, and reverse flight are presented.

Raney, David L.↗

Carbon dioxide evolution rate as a method to monitor and control an aerobic biological waste treatment system

An experimental system was developed to study the microbial growth kinetic of an undefined mixed culture in an erobic biological waste treatment process. The experimental results were used to develop a mathematical model that can predict the performance of a bioreactor. The bioreactor will be used to regeneratively treat waste material which is expected to be generated during a long term manned space mission. Since the presence of insoluble particles in the chemically undefined complex media made estimating biomass very difficult in the real system, a clean system was devised to study the microbial growth from the soluble substrate.

Lee, S. S.↗

Modelling global methane emissions from livestock: Biological and nutritional controls

The available observations of methane production from the literature have been compiled into a ruminant methane data base. This data base includes 400 treatment mean observations of methane losses from cattle and sheep, and minor numbers of measurements from other species. Methane loss varied from 2.0 to 11.6 percent of dietary gross energy. Measurements included describe the many different weights and physiological states of the animals fed and diets ranging from all forage to all concentrate diets or mixtures. An auxiliary spreadsheet lists approximately 1000 individual animal observations. Many important concepts have emerged from our query and analysis of this data set. The majority of the world's cattle, sheep, and goats under normal husbandry circumstances likely produce methane very close to 6 percent of their daily diets gross energy (2 percent of the diet by weight). Although individual animals or losses from specific dietary research circumstances can vary considerably, the average for the vast majority of groups of ruminant livestock are likely to fall between 5.5 to 6.5 percent. We must caution, however, that little experimental data is available for two-thirds of the world's ruminants in developing countries. Available evidence suggests similar percentage of emissions, but this supposition needs confirmation. More importantly, data is skimpy or unavailable to describe diet consumption, animal weight, and class distribution.

Johnson, Donald E.↗

Redox-enabled electronic interrogation and feedback control of hierarchical and networked biological systems

Abstract Microelectronic devices can directly communicate with biology, as electronic information can be transmitted via redox reactions within biological systems. By engineering biology’s native redox networks, we enable electronic interrogation and control of biological systems at several hierarchical levels: proteins, cells, and cell consortia. First, electro-biofabrication facilitates on-device biological component assembly. Then, electrode-actuated redox data transmission and redox-linked synthetic biology allows programming of enzyme activity and closed-loop electrogenetic control of cellular function. Specifically, horseradish peroxidase is assembled onto interdigitated electrodes where electrode-generated hydrogen peroxide controls its activity. E. coli ’s stress response regulon, oxyRS , is rewired to enable algorithm-based feedback control of gene expression, including an eCRISPR module that switches cell-cell quorum sensing communication from one autoinducer to another—creating an electronically controlled ‘bilingual’ cell. Then, these disparate redox-guided devices are wirelessly connected, enabling real-time communication and user-based control. We suggest these methodologies will help us to better understand and develop sophisticated control for biology.

59 BASIC BIOLOGICAL SCIENCES↗

Importance of temperature control for HEFLEX, a biological experiment for Spacelab 1

The importance of temperature control to HEFLEX, a Spacelab experiment designed to measure kinetic properties of Helianthis nutation in a low-g environment, is discussed. It is argued that the development of the HEFLEX experiment has been severely hampered by the inadequate control of ambient air temperature provided by the spacecraft module design. A worst case calculation shows that delivery of only 69% of the maximum yield of useful data from the HEFLEX system is guaranteed; significant data losses from inadequate temperature control are expected. The magnitude of the expected data losses indicates that the cost reductions associated with imprecise temperature controls may prove to be a false economy in the long term.

Chapman, D. K.↗

Controlled ecological life support system - biological problems

The general processes and controls associated with two distinct experimental paradigms are examined. Specific areas for research related to biotic production (food production) and biotic decomposition (waste management) are explored. The workshop discussions were directed toward Elemental cycles and the biological factors that affect the transformations of nutrients into food, of food material into waste, and of waste into nutrients were discussed. To focus on biological issues, the discussion assumed that (1) food production would be by biological means (thus excluding chemical synthesis), (2) energy would not be a limiting factor, and (3) engineering capacity for composition and leak rate would be adequate.

Moore, B., III↗

Design and control strategies for CELSS - Integrating mechanistic paradigms and biological complexities

Systems analysis and control theory consideration are given to simulations of both individual components and total systems, in order to develop a reliable control strategy for a Controlled Ecological Life Support System (CELSS) which includes complex biological components. Because of the numerous nonlinearities and tight coupling within the biological component, classical control theory may be inadequate and the statistical analysis of factorial experiments more useful. The range in control characteristics of particular species may simplify the overall task by providing an appropriate balance of stability and controllability to match species function in the overall design. The ultimate goal of this research is the coordination of biological and mechanical subsystems in order to achieve a self-supporting environment.

Moore, B., III↗