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NASA NTRS2017

Identification of Novel Desiccation-Tolerant S. cerevisiae Strains for Deep Space Biosensors

NASA's BioSentinel mission, a secondary payload that will fly on the Space Launch Systems first Exploration Mission (EM-1), utilizes the budding yeast S. cerevisiae to study the biological response to the deep space radiation environment. Yeast samples are desiccated prior to launch to suspend growth and metabolism while the spacecraft travels to its target heliocentric orbit beyond Low Earth Orbit. Each sample is then rehydrated at the desired time points to reactivate the cells. A major risk in this mission is the loss of cell viability that occurs in the recovery period following the desiccation and rehydration process. Cell survival is essential for the detection of the biological response to features in the deep space environment, including ionizing radiation.The aim of this study is to mitigate viable cell loss in future biosensors by identifying mutations and genes that confer tolerance to desiccation stress in rad51, a radiation-sensitive yeast strain. We initiated a screen for desiccation-tolerance after rehydrating cells that were desiccated for three years, and selected various clones exhibiting robust growth. To verify retention of radiation sensitivity in the isolated clonesa crucial feature for a successful biosensorwe exposed them to ionizing radiation. Finally, to elucidate the genetic and molecular bases for observed desiccation-tolerance, we will perform whole-genome sequencing of those rad51 clones that exhibit both robust growth and radiation sensitivity following desiccation. The identification and characterization of desiccation-tolerant strains will allow us to engineer a biological model that will be resilient in face of the challenges of the deep space environment, and will thus ensure the experimental success of future biosensor missions.

S. cerevisiae↗

DOE OSTI2021

Air Dehumidification using Ionic Liquid-Based Fiber Bundle Membrane Contactor

Air dehumidification is essential since excess moisture in the buildings causes discomfort to the occupants, encourages the production of air pathogens such as mold or mildew, and causes corrosion and rotting that degrade building materials. Existing moisture removal processes are mainly focused on condensation and desiccant (liquid or solid) techniques with direct contact between air and desiccant. However, these methods are energy-intensive, or desiccant might be lost or cause corrosion in the process. The main objective of this study is to investigate an ionic liquid-based liquid desiccant absorber based on a membrane fiber bundle. The novel system consists of membrane contactors containing bundles of 10,000 polypropylene fibers. The fiber bundles have 0.3 micron diameter, with ionic liquid flowing inside, and air flowing outside. The fibers provide a high contact area among phases: 1.4 m2 contact surface area in a 0.00015 m3 volume. The ionic liquid as a sorbent stipulates the selectivity for air, prevents the loss of solvent in the operation due to negligible volatility, provides fast diffusion due to low viscosity compared to common ionic liquids, and has high affinity and solubility in water. The dehumidification capacity of the membrane technology was experimentally investigated. The experimental results show that the ionic-liquid based membrane system can effectively remove excess moisture from the air. The novel fiber bundle dehumidification system has a system volume of 0.00798 m3 (7.98 L) and active heat and mass transfer surface area of 8.4 m2. It achieved an average dehumidification of 320 ± 25 W with a volumetric air flowrate of 3.1 m3/min (108 ft3/min).

Turnaoglu, Tugba↗

NASA NTRS2017

Identification of Novel Desiccation-Tolerant S. cerevisiae Strains for Deep Space Biosensors

NASA's BioSentinel mission, a secondary payload that will fly on the Space Launch System's first Exploration Mission (EM-1), utilizes the budding yeast S. cerevisiae to study the biological response to the deep space radiation environment. Yeast samples are desiccated prior to launch to suspend growth and metabolism while the spacecraft travels to its target heliocentric orbit beyond Low Earth Orbit. Each sample is then rehydrated at the desired time points to reactivate the cells. A major risk in this mission is the loss of cell viability that occurs in the recovery period following the desiccation and rehydration process. Cell survival is essential for the detection of the biological response to features in the deep space environment, including ionizing radiation. The aim of this study is to mitigate viable cell loss in future biosensors by identifying mutations and genes that confer tolerance to desiccation stress in rad51, a radiation-sensitive yeast strain. We initiated a screen for desiccation-tolerance after rehydrating cells that were desiccated for three years, and selected various clones exhibiting robust growth. To verify retention of radiation sensitivity in the isolated clones - a crucial feature for a successful biosensor - we exposed them to ionizing radiation. Finally, to elucidate the genetic and molecular bases for observed desiccation-tolerance, we will perform whole-genome sequencing of those rad51 clones that exhibit both robust growth and radiation sensitivity following desiccation. The identification and characterization of desiccation-tolerant strains will allow us to engineer a biological model that will be resilient in face of the challenges of the deep space environment, and will thus ensure the experimental success of future biosensor missions.

S. cerevisiae↗

DOE OSTI2025

Evaluation of desiccation cracking characteristics of inorganic micro-fiber-reinforced engineered barrier material (IMEBM) for geological repository

Abstract Buffer material is crucial for the engineering barrier system to dispose of high-level radioactive waste in a geological repository. A reliable buffer material should be able to maintain good sealing characteristics and minimize desiccation cracking. In this study, the effectiveness of inorganic fiber-reinforced engineering barrier material in reducing desiccation cracks in bentonite was evaluated via desiccation tests, image analysis, and air permeability tests. The effects of fiber type (E-glass fiber and basalt fiber) and fiber content (0.0%, 0.5%, 1.0%, 1.5%, 3.0%, and 5.0% of dry weight of the bentonite) on the development of desiccation cracks in the fiber–bentonite mixtures with the same given initial moisture content were evaluated. The results indicated that the addition of fibers could significantly reduce the crack size and area in bentonite during the drying. Basalt fibers showed a slightly better reinforcement effect than E-glass fibers when the fiber content was lower than 3.0%. The addition of fibers prevented the development of penetrating cracks and significantly reduced the permeability of the bentonite after drying. The permeabilities of basalt fiber- and E-glass fiber-reinforced bentonite composites with 3% reinforcement were 5.81 × 10 –11 m 2 and 7.24 × 10 –11 m 2 , respectively, which were 64 and 51 times smaller than that of pure bentonite. X-ray–CT observation of the internal structure of the samples after drying showed that the addition of fibers significantly changed the crack morphology and potentially increased the tortuosity.

Feng, Yuan↗

DOE OSTI2021

Internal curing of cement pastes by means of superabsorbent polymers visualized by neutron tomography

Highlights: • The kinetics of water release from SAPs were studied by neutron tomography. • The time window for internal curing was linked to the water release from SAPs. • The water release links to the SAP effectiveness to mitigate autogenous shrinkage. • One SAP type was effective while another prematurely released its stored water. Superabsorbent polymers (SAPs) are used to counteract self-desiccation in order to mitigate autogenous shrinkage, a problem in cementitious systems with a low water-to-cement ratio. The release kinetics during internal curing are of importance as not all SAP types are able to efficiently mitigate autogenous shrinkage. In this study, neutron tomography is used to study and visualize the water release kinetics over time. Per-voxel analysis of the time-attenuation curve was performed using piecewise-constant functions. Two different SAP types were studied, one being able to mitigate autogenous shrinkage and one quickly releasing its stored water after final setting. The tomography results correspond to autogenous shrinkage measurements and nuclear magnetic resonance tests. The visualization provides information on the time of water release by the SAPs after setting and the time window of internal curing. This opens additional insights towards the application of SAPs in the construction sector and provides information on the mechanism of internal curing.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Disturbance triggers non-linear microbe–environment feedbacks

Abstract. Conceptual frameworks linking microbial community membership, properties, and processes with the environment and emergent function have been proposed but remain untested. Here we refine and test a recent conceptual framework using hyporheic zone sediments exposed to wetting–drying transitions. Our refined framework includes relationships between cumulative properties of a microbial community (e.g., microbial membership, community assembly properties, and biogeochemical rates), environmental features (e.g., organic matter thermodynamics), and emergent ecosystem function. Our primary aim was to evaluate the hypothesized relationships that comprise the conceptual framework and contrast outcomes from the whole and putatively active bacterial and archaeal communities. Throughout the system we found threshold-like responses to the duration of desiccation. Membership of the putatively active community – but not the whole bacterial and archaeal community – responded due to enhanced deterministic selection (an emergent community property). Concurrently, the thermodynamic properties of organic matter (OM) became less favorable for oxidation (an environmental component), and respiration decreased (a microbial process). While these responses were step functions of desiccation, we found that in deterministically assembled active communities, respiration was lower and thermodynamic properties of OM were less favorable. Placing the results in context of our conceptual framework points to previously unrecognized internal feedbacks that are initiated by disturbance and mediated by thermodynamics and that cause the impacts of disturbance to be dependent on the history of disturbance.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS2015

Computer Simulation and Modeling of CO2 Removal Systems for Exploration 2013-2014

The Atmosphere Revitalization Recovery and Environmental Monitoring (ARREM) project was initiated in September of 2011 as part of the Advanced Exploration Systems (AES) program. Under the ARREM project and the follow-on Life Support Systems (LSS) project, testing of sub-scale and full-scale systems has been combined with multiphysics computer simulations for evaluation and optimization of subsystem approaches. In particular, this paper will describes the testing and 1-D modeling of the combined water desiccant and carbon dioxide sorbent subsystems of the carbon dioxide removal assembly (CDRA). The goal is a full system predictive model of CDRA to guide system optimization and development.

Coker, R.↗

NASA NTRS2020

Sensitive Probing of Exoplanetary Oxygen via Mid-Infrared Collisional Absorption

The collision-induced fundamental vibration–rotation band at 6.4 μm is the strongest absorption feature from O2 in the infrared, yet it has not been previously incorporated into exoplanet spectral analyses for several reasons. Either collision-induced absorptions (CIAs) were not included or incomplete/obsolete CIA databases were used. Also, the current version of HITRAN does not include CIAs at 6.4 μm with other collision partners (O2–X). We include O2–X CIA features in our transmission spectroscopy simulations by parameterizing the 6.4-μm O2–N2 CIA based on ref. 3 and the O2–CO2 CIA based on ref. 4. Here we report that the O2–X CIA may be the most detectable O2 feature for transit observations. For a potential TRAPPIST-1 e analogue system within 5 pc of the Sun, it could be the only O2 signature detectable with the James Webb Space Telescope (JWST) (using MIRI LRS (Mid-Infrared Instrument low-resolution spectrometer)) for a modern Earth-like cloudy atmosphere with biological quantities of O2. Also, we show that the 6.4-μm O2–X CIA would be prominent for O2-rich desiccated atmospheres and could be detectable with JWST in just a few transits. For systems beyond 5 pc, this feature could therefore be a powerful discriminator of uninhabited planets with non-biological ‘false-positive’ O2 in their atmospheres, as they would only be detectable at these higher O2 pressures.

Thomas J Fauchez↗

NASA NTRS2020

Sensitive Probing of Exoplanetary Oxygen via Mid-Infrared Collisional Absorption

The collision-induced fundamental vibration–rotation band at 6.4 μm is the strongest absorption feature from O2 in the infrared1,2,3, yet it has not been previously incorporated into exoplanet spectral analyses for several reasons. Either collision-induced absorptions (CIAs) were not included or incomplete/obsolete CIA databases were used. Also, the current version of HITRAN does not include CIAs at 6.4 μm with other collision partners (O2–X). We include O2–X CIA features in our transmission spectroscopy simulations by parameterizing the 6.4-μm O2–N2 CIA based on ref. 3 and the O2–CO2 CIA based on ref. 4. Here we report that the O2–X CIA may be the most detectable O2 feature for transit observations. For a potential TRAPPIST-1 e analogue system within 5 pc of the Sun, it could be the only O2 signature detectable with the James Webb Space Telescope (JWST) (using MIRI LRS (Mid-Infrared Instrument low-resolution spectrometer)) for a modern Earth-like cloudy atmosphere with biological quantities of O2. Also, we show that the 6.4-μm O2–X CIA would be prominent for O2-rich desiccated atmospheres5 and could be detectable with JWST in just a few transits. For systems beyond 5 pc, this feature could therefore be a powerful discriminator of uninhabited planets with non-biological ‘false-positive’ O2 in their atmospheres, as they would only be detectable at these higher O2 pressures.

Thomas Fauchez↗

NASA NTRS2016

Genomic and Phenotypic Characterization of Yeast Biosensor for Deep-space Radiation

The BioSentinel mission was selected to launch as a secondary payload onboard NASA Exploration Mission 1 (EM-1) in 2018. In BioSentinel, the budding yeast Saccharomyces cerevisiae will be used as a biosensor to measure the long-term impact of deep-space radiation to living organisms. In the 4U-payload, desiccated yeast cells from different strains will be stored inside microfluidic cards equipped with 3-color LED optical detection system to monitor cell growth and metabolic activity. At different times throughout the 12-month mission, these cards will be filled with liquid yeast growth media to rehydrate and grow the desiccated cells. The growth and metabolic rates of wild-type and radiation-sensitive strains in deep-space radiation environment will be compared to the rates measured in the ground- and microgravity-control units. These rates will also be correlated with measurements obtained from onboard physical dosimeters. In our preliminary long-term desiccation study, we found that air-drying yeast cells in 10% trehalose is the best method of cell preservation in order to survive the entire 18-month mission duration (6-month pre-launch plus 12-month full-mission periods). However, our study also revealed that desiccated yeast cells have decreasing viability over time when stored in payload-like environment. This suggests that the yeast biosensor will have different population of cells at different time points during the long-term mission. In this study, we are characterizing genomic and phenotypic changes in our yeast biosensor due to long-term storage and desiccation. For each yeast strain that will be part of the biosensor, several clones were reisolated after long-term storage by desiccation. These clones were compared to their respective original isolate in terms of genomic composition, desiccation tolerance and radiation sensitivity. Interestingly, clones from a radiation-sensitive mutant have better desiccation tolerance compared to their original isolate without losing radiation sensitivity. We employed Next-Generation Sequencing technology to better understand this phenotypic variation. Current effort is focusing on the analysis of high-throughput sequencing data to look for genomic changes in these reisolated clones compared to their original isolate.

yeast↗

NASA NTRS2001

Advanced CO2 Removal Technology Development

The Advanced CO2 Removal Technical Task Agreement covers three active areas of research and development. These include a study of the economic viability of a hybrid membrane/adsorption CO2 removal system, sorbent materials development, and construction of a database of adsorption properties of important fixed gases on several adsorbent material that may be used in CO2 removal systems. The membrane/adsorption CO2 removal system was proposed as a possible way to reduce the energy consumption of the four-bed molecular sieve system now in use. Much of the energy used by the 4BMS is used to desorb water removed in the device s desiccant beds. These beds might be replaced by a desiccating membrane that moves the water from [he incoming stream directly into the outlet stream. The approach may allow the CO2 removal beds to operate at a lower temperature. A comparison between models of the 4BMS and hybrid systems is underway at Vanderbilt University. NASA Ames Research Center has been investigating a Ag-exchanged zeolites as a possible improvement over currently used Ca and Na zeolites for CO2 removal. Silver ions will complex with n:-bonds in hydrocarbons such as ethylene, giving remarkably improved selectivity for adsorption of those materials. Bonds with n: character are also present in carbon oxides. NASA Ames is also continuing to build a database for adsorption isotherms of CO2, N2, O2, CH4, and Ar on a variety of sorbents. This information is useful for analysis of existing hardware and design of new processes.

Finn, John E.↗

DOE OSTI2021

Removal of water vapor from streams containing carbon dioxide and/or carbon monoxide

Methods and systems for removing water vapor from a feed gas prior to further processing the feed gas according to a downstream PSA process are described. The feed gas can include CO2 and/or CO and/or H2 and the PSA process can be used to separate components of the feed gas from one another, for instance, for CO2 capture. Light product off of the PSA process is utilized to regenerate desiccant of a dryer used in the water vapor removal process that is carried out prior to the feed gas entering the PSA process. The water vapor removal process can be heated by providing thermal energy directly to the dryer and/or to a regenerating stream that regenerates the desiccant of the dryer. The thermal energy can be low cost energy—for instance, waste heat off of a system that provides the feed gas.

Ritter, James A.↗

DOE OSTI2021

Development of Gyrosole™ and Solar Thermal HVAC Technology for 20-60kW Applications, Final Report, CRADA No. TC02164.0

This was a collaborative effort between Lawrence Livermore National Security, LLC as manager and operator of Lawrence Livermore National Laboratory (LLNL) and Sol Xorce LLC to develop LLNL’s Gyrosole™ solar thermal energy system. The original scope of the CRADA project was to develop LLNL’s Gyrosole™thermal-powered motor technology for solar thermal energy system use, and was originally entitled, "Development of Gyrosole™ Solar Thermal Technology for 20-60 kW Applications". The scope and title of the project were later modified under Amendment One to the CRADA. The technical objective of this CRADA project was to develop Gyrosole™ motor technology so that it is marketplace-ready, and to produce a motor prototype that: Produces 50kW power at >22% efficiency; Operates oil-free; Has sufficient reliability and lifetime to be suitable for both commercial and residential applications; Costs less than $100 per kW installed to produce at scale; and, Can be combined cost-effectively to produce 200kW. The motor prototype would be integrated into model systems that provide electricity generation in combination with air/water heating, heat-pump driven cooling, desiccant dehumidification, and light industrial heat supply.

14 SOLAR ENERGY↗

DOE OSTI2023

Evaluation of Desiccation Behavior in Basalt Microfiber–Reinforced Bentonite Clay for Geological Repositories of Nuclear Spent Fuel Using Digital Image Correlation

ABSTRACT Secure storage of nuclear spent fuel (NSF) is of great concern for protecting public health and safety. The preferred long-term solution is underground containment in geological repositories, where one or more engineered barrier materials (EBM) encapsulate the NSF and separate it from the natural rock. Bentonite clay is commonly used as an EBM due to its many advantageous properties including low hydraulic conductivity, which ensures limitation of water infiltration to the system and the subsequent risk of corrosion in NSF canisters. However, bentonite clay subjected to heating from nuclear decay may form desiccation cracking. This study conducted disk-shaped free shrinkage tests and ring-shaped restrained shrinkage tests of bentonite clay samples reinforced with basalt microfibers. Digital image correlation was used as a noncontact full-field displacement measurement to track the time-evolving shrinkage and desiccation cracking phenomena and make quantified comparisons between plain bentonite and bentonite with varying contents of basalt microfibers (i.e., 0.0, 0.5, 1.0, and 1.5 % wt.). Results indicate that plain bentonite and basalt microfiber-reinforced samples showed similar free shrinkage behavior, while desiccation cracking behavior was significantly altered by adding basalt microfibers. Microfiber reinforcement effectively reduced major cracks through a “crack-bridging” effect while causing minor cracks to initiate earlier and at higher moisture contents than plain bentonite. Results infer that reinforcing plain bentonite with inorganic microfibers can potentially control desiccation cracking, leading to safer and improved nuclear waste management.

Materials Science↗

DOE OSTI2021

A Combined Water and CO2 Direct Air Capture System (CRADA 521)

The primary objective of this project is to demonstrate the outstanding technical and economic performance of a transformational Hybrid DAC (HDAC) technology that simultaneously captures CO2 and water from the air. Air is passed over a CO2 selective sorbent to remove ≥85% of the CO2 from the air stream. The atmospheric water extraction (AWE) section of the unit utilizes a novel isothermal pressure swing regeneration cycle with desiccant beds thermally coupled by heat pipes that provide a passive heat transfer mechanism to “cancel” the heat of water vapor adsorption. By proving system performance through this demonstration project, our initial technoeconomic analysis (TEA) will be validated, showing that HDAC technology: 1) is deployable in many more locations with limited water resources, 2) improves the financial returns, and 3) reduces risks from volatility in the price of CO2.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

NASA NTRS2022

Sub-Scale Adsorption and Compression CO2 Removal System Re-Design

This system is a re-design of NASA’s previously developed Thermally Coupled Temperature Swing Adsorption and Compression (TC-TSAC) systems, providing an air revitalization alternative to assist in the agency’s Moon to Mars exploration objectives. The system consists of two half-cycles whereby packed beds of regenerable bulk sorbents and heat cycles simultaneously adsorb and compress carbon dioxide. The team designed the adsorption and compression beds in a cylindrical shape to maximize airflow. A desiccant bed helps lower humidity and the sorbent Zeolite 13X is used to capture carbon dioxide. Both are monitored by sensors. There is a custom heater within the system that lies in the adsorption bed to regenerate the sorbent, and there is a cooler around the compression bed. The system produced for NASA modeling, experimental test results, and operational results to be able to be scaled up to 4kg CO2 removal per day. The system was found to be 1/16 scale for 1kg of CO2 removal per day. The adsorption and desorption processes were successful, however issues with making the compression bed airtight resulted in an inability to demonstrate full compression. The team provided design suggestions and alternative solutions given these results. This paper describes the final design, fabrication, assembly, and testing of the TC-TSAC re-design.

Joaquin Pesqueira↗

NASA NTRSDate not supplied

Benchmarking Computational Tools for Calling SNPs and Indels in Complex Microbial Populations

The NASA BioNutrients missions seek to understand the suitability of microorganisms for bioproduction during space flight. One topic of interest is the stability of microbial genomes during long-term ambient storage and subsequent rehydration and growth. To address these questions, samples from 8 species were flown to ISS for 5 years of desiccated storage at ambient temperature (Stasis Packs) and 2 species were packaged along with powdered media inside a bioreactor system to allow hydration and growth in microgravity (Production Packs). For both systems, Whole Genome Sequencing (WGS) of the DNA extracted from the returned samples and paired ground controls will be conducted to identify changes in genome stability due to time, storage conditions and growth in space. Across the technical replicates, ground controls, 10 timepoints, and multiple experimental conditions, ~300 samples have been selected for initial analysis with WGS sequencing to 100x coverage. A flexible and resource efficient mutation calling pipeline is needed to process this large dataset and allow for comparisons between species. Many bioinformatics tools for calling Indels and Single Nucleotide Variants (SNVs) are designed for use with pure isolates, where true variations from the reference genome are expected to dominate the reads aligning to the location of mutation. In contrast, DNA from the Stasis Pack (SP) samples was collected directly after recovery from desiccated storage and the Production Pack (PP) samples were collected after fermentation. In this context, reads with mutations are expected to be less frequent than reads that align with the reference genome, as each sample will include multiple lines of cells. Thus, BioNutrients samples are expected to be similar to samples from cancer cell or “pooled” sequencing approaches. In preparation for the analysis of the BioNutrients samples, we have tested three mutation calling tools (GATK for Microbes, BreSeq and DiscoSNP) designed for complex samples. A challenge of validating mutation identification pipelines is a lack of “Ground Truth” datasets, especially for complex samples. To compare these three tools, we sought to identify mutations in pre-existing WGS data collected from populations of Chlamydomonas reinhardtii that were exposed to UV mutagenesis and growth in LEO as part of the Space Algae-1 mission. Here we present a summary of these tools against the analysis originally conducted using the CRISP tool. Critical metrics are compared such as runtime, the number of SNPs, the number and size of Indels, and patterns of transversion and transitions identified by each tool are reported. By sharing these benchmarking results collected in support of the BioNutrients mission, we aim to guide others seeking to identify SNVs in similarly complex microbial samples.

Biology↗

DOE OSTI2022

Inclusion of a cold hardening scheme to represent frost tolerance is essential to model realistic plant hydraulics in the Arctic–boreal zone in CLM5.0-FATES-Hydro

As temperatures decrease in autumn, vegetation of temperate and boreal ecosystems increases its tolerance to freezing. This process, known as hardening, results in a set of physiological changes at the molecular level that initiate modifications of cell membrane composition and the synthesis of anti-freeze proteins. Together with the freezing of extracellular water, anti-freeze proteins reduce plant water potentials and xylem conductivity. To represent the responses of vegetation to climate change, land surface schemes increasingly employ “hydrodynamic” models that represent the explicit fluxes of water from soil and through plants. The functioning of such schemes under frozen soil conditions, however, is poorly understood. Nonetheless, hydraulic processes are of major importance in the dynamics of these systems, which can suffer from, e.g., winter “frost drought” events. In this study, we implement a scheme that represents hardening into CLM5.0-FATES-Hydro. FATES-Hydro is a plant hydrodynamics module in FATES, a cohort model of vegetation physiology, growth, and dynamics hosted in CLM5.0. We find that, in frozen systems, it is necessary to introduce reductions in plant water loss associated with hardening to prevent winter desiccation. This work makes it possible to use CLM5.0-FATES-Hydro to model realistic impacts from frost droughts on vegetation growth and photosynthesis, leading to more reliable projections of how northern ecosystems respond to climate change.

58 GEOSCIENCES↗