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At least 91 records · Page 5

Employing methylotrophs for a green economy: one-carbon to fuel them all and through metabolism redesign them

Microbial platforms are currently being optimized to revolutionize industrial energy production while mitigating shortages of global resources and food supplies. Here, in this work, we address recent advances to develop bacterial methylotrophic platforms as promising platforms enabling the reuse of products and materials (at their highest value) while reducing waste and pollution.

59 BASIC BIOLOGICAL SCIENCES↗

Hybrid biological-chemical strategy for converting polyethylene into a recyclable plastic monomer using engineered Corynebacterium glutamicum

Converting polyethylene (PE) into valuable materials, particularly ones that are better for the environment than the incumbent plastics, not only helps mitigate environmental issues caused by plastic waste but also alleviates the long-standing problem of microbial fermentation competing with food supplies. However, the inherent robustness of PE due to its strong carbon-carbon bonds and high molecular weight necessitates harsh decomposition conditions, resulting in diverse decomposition outcomes that present significant challenges for downstream applications, especially for bioconversion. In this study, we demonstrate a hybrid biological-chemical conversion process for PE, converting its decomposition products, namely short-chain diacids, into a monomer, β-keto-δ-lactone (BKDL), for highly recyclable polydiketoenimine plastics using engineered Corynebacterium glutamicum. Since BKDL synthesis requires a substantial supply of malonyl-CoA, we employed an alternative biosynthesis pathway that leverages C. glutamicum's natural proficiency in amino acid production. We optimized this pathway in vivo by minimizing carbon loss to CO2 and byproducts, improving the transporter system, and maximizing co-factor regeneration. Furthermore, we co-optimized the PE deconstruction process to produce predominantly C4 to C6 diacids and integrated three catabolic pathways into the engineered strain to enhance diacid utilization, maximizing the carbon conversion from PE. Finally, an engineered polyketide synthase was introduced into C. glutamicum to enable BKDL synthesis. This work demonstrates the potential of a chemo-biological hybrid strategy for recycling plastic waste, highlighting its promise in addressing environmental challenges and promoting sustainable materials.

Zhan, Chunjun↗

Corn grown on dredged sediments alters rat behavior in the elevated plus maze via the gut mycobiome

The use of marginal lands for growing food has increased worldwide. Many of these lands are supplemented with soil amendments to enhance their productivity, but they may also introduce contaminants depending on their origin. The use of sediments dredged from commercial waterways as a soil amendment has increased in recent years. However, there is significant concern regarding their potential to negatively affect public health by transferring contaminants, like metals, to the food supply. This study examined the behavior, microbiome and physiology of rats fed corn grown on dredged sediments with rats fed commercial feed corn and related those metrics to kernel metal content. Metal content did not differ between kernels grown on dredged sediments and feed corn for most metals except iron which was greater in commercial feed corn. Although there is some variability by animal response, animals fed corn grown on dredged sediments had a gut microbial community that generally promoted anxiety-like behavior while animals fed feed corn had a gut microbial community that promoted a more typical response. These findings suggest the effect of corn grown on dredged sediments on public health is complex and highlights the need for further investigation.

Rua, Megan [Wright State University, Dayton, OH]↗

Predicting weather impacts on corn production in a data-limited region using a transfer learning approach

The stability of food supply and prices may depend more on annual changes in yields from year-to-year variability in weather than on longer-term average changes from changing climatic conditions. However, the absence of high-quality data on crop yields at fine spatial resolutions in many regions of the world makes it challenging to statistically model their response to interannual variability in weather patterns. Therefore, there is a need for empirical methods that can project annual crop yield changes even in limited data regions. Here, we propose a transfer learning algorithm that uses high spatial resolution data from one region to project yields in another region with more limited data. The goal of our work is to understand what data types can be beneficial for transferring learning from a source region to a very different target region with more limited data. We utilize Long Short-Term Memory to develop a transfer learning model that is trained on historical county-level corn yield in the United States and predicts district-level corn yield variations in India. Even using smaller amounts of data in India, simulating a data-scarce region, we achieve an average root mean square error of 0.48 bu acre−1 in predicting interannual yield variations. Using Shapley values to interpret results, we explore the contribution of the different weather parameters to interannual yield variability and find a larger influence of precipitation-related variables. Our study demonstrates the usefulness of this method for transferring models of weather impacts on crop yields trained on a data-rich country to one with more limited data. It suggests the potential of applying the transfer learning model to mitigate the need for extensive raw data globally.

Vishwakarma, Srishti [ORNL] (ORCID:000000031674419↗

Using supervised machine-learning approaches to understand abiotic stress tolerance and design resilient crops

Abiotic stresses such as drought, heat, cold, salinity and flooding significantly impact plant growth, development and productivity. As the planet has warmed, these abiotic stresses have increased in frequency and intensity, affecting the global food supply and making it imperative to develop stress-resilient crops. In the past 20 years, the development of omics technologies has contributed to the growth of datasets for plants grown under a wide range of abiotic environments. Integration of these rapidly growing data using machine-learning (ML) approaches can complement existing breeding efforts by providing insights into the mechanisms underlying plant responses to stressful conditions, which can be used to guide the design of resilient crops. In this review, we introduce ML approaches and provide examples of how researchers use these approaches to predict molecular activities, gene functions and genotype responses under stressful conditions. Finally, we consider the potential and challenges of using such approaches to enable the design of crops that are better suited to a changing environment. This article is part of the theme issue ‘Crops under stress: can we mitigate the impacts of climate change on agriculture and launch the ‘Resilience Revolution’?’.

abiotic stress↗

Interactions Between Climate Mean and Variability Drive Future Agroecosystem Vulnerability

ABSTRACT Agriculture is crucial for global food supply and dominates the Earth's land surface. It is unknown, however, how slow but relentless changes in climate mean state, versus random extreme conditions arising from changing variability , will affect agroecosystems' carbon fluxes, energy fluxes, and crop production. We used an advanced weather generator to partition changes in mean climate state versus variability for both temperature and precipitation, producing forcing data to drive factorial‐design simulations of US Midwest agricultural regions in the Energy Exascale Earth System Model. We found that an increase in temperature mean lowers stored carbon, plant productivity, and crop yield, and tends to convert agroecosystems from a carbon sink to a source, as expected; it also can cause local to regional cooling in the earth system model through its effects on the Bowen Ratio. The combined effect of mean and variability changes on carbon fluxes and pools was nonlinear, that is, greater than each individual case. For instance, gross primary production reduces by 9%, 1%, and 13% due to change in mean temperature, change in temperature variability, and change in both temperature mean and variability, respectively. Overall, the scenario with change in both temperature and precipitation means leads to the largest reduction in carbon fluxes (−16% gross primary production), carbon pools (−35% vegetation carbon), and crop yields (−33% and −22% median reduction in yield for corn and soybean, respectively). By unambiguously parsing the effects of changing climate mean versus variability and quantifying their nonadditive impacts, this study lays a foundation for more robust understanding and prediction of agroecosystems' vulnerability to 21st‐century climate change.

54 ENVIRONMENTAL SCIENCES↗

Systemic stomatal responses in plants: Coordinating development, stress, and pathogen defense under a changing climate

To successfully survive, develop, grow and reproduce, multicellular organisms must coordinate their molecular, physiological, developmental and metabolic responses among their different cells and tissues. This process is mediated by cell-to-cell, vascular and/or volatile communication, and involves electric, chemical and/or hydraulic signals. Within this context, stomata serve a dual role by coordinating their responses to the environment with their neighbouring cells at the epidermis, but also with other stomata present on other parts of the plant. As stomata represent one of the most important conduits between the plant and its above-ground environment, as well as directly affect photosynthesis, respiration and the hydraulic status of the plant by controlling its gas and vapour exchange with the atmosphere, coordinating the overall response of stomata within and between different leaves and tissues plays a cardinal role in plant growth, development and reproduction. Here, we discuss different examples of local and systemic stomatal coordination, the different signalling pathways that mediate them, and the importance of systemic stomatal coordination to our food supply, ecosystems and weather patterns, under our changing climate. Importantly, we further discuss the potential biotechnological implications of regulating systemic stomatal responses for enhancing agricultural productivity in a warmer and CO 2 -rich environment.

59 BASIC BIOLOGICAL SCIENCES↗

Approaches to investigate crop responses to ozone pollution: from O 3 -FACE to satellite-enabled modeling

Ozone (O 3 ) is a damaging air pollutant to crops. As one of the most reactive oxidants known, O 3 rapidly forms other reactive oxygen species (ROS) once it enters leaves through stomata. Those ROS in turn can cause oxidative stress, reduce photosynthesis, accelerate senescence, and decrease crop yield. To improve and adapt our feed, fuel, and food supply to rising O 3 pollution, a number of Free Air Concentration Enrichment (O 3 -FACE) facilities have been developed around the world and have studied key staple crops. In this review, we provide an overview of the FACE facilities and highlight some of the lessons learned from the last two decades of research. We discuss the differences between C 3 and C 4 crop responses to elevated O 3 , the possible trade-off between productivity and protection, genetic variation in O 3 response within and across species, and how we might leverage this observed variation for crop improvement. We also highlight the need to improve understanding of the interaction between rising O 3 pollution and other aspects of climate change, notably drought. Finally, we propose the use of globally modeled O 3 data that are available at increasing spatial and temporal resolutions to expand upon the research conducted at the limited number of global O 3 -FACE facilities.

54 ENVIRONMENTAL SCIENCES↗

Human perturbations to mercury in global rivers

Mercury compounds are potent neurotoxins that pose threats to human health, primarily through fish consumption. Rivers, critical for drinking water and food supply, have seen rapid increases in mercury concentrations and export to coastal margins since the Industrial Revolution (~1850). However, patterns of these changes remain understudied, limiting assessments of environmental policies. Here, we develop a global model to simulate preindustrial riverine total mercury and assess human perturbations by comparing it to present-day conditions. We find that global rivers transported ~390 megagrams annually of mercury to the oceans in the preindustrial era, with spatial variability. Human activities have elevated riverine mercury budgets by two to three times in the present day. Establishing a baseline riverine mercury level, our findings reveal rapid responses of riverine mercury to human perturbations and could be used to inform targets for global riverine mercury restoration. Total riverine mercury concentrations could also be used as indicators to comprehensively understand the effectiveness of mercury pollution governance.

Science & Technology - Other Topics↗

Turbo FRMAC 2021 v.11.0.0

The Turbo FRMAC analysis tool performs complex calculations to quickly evaluate radiological hazards during an emergency response by assessing impacts to the public, workers, and the food supply. Turbo FRMAC can be used to evaluate the hazard from a wide variety of radiological incidents. Turbo FRMAC calculations are based on methods established by the Federal Radiological Monitoring and Assessment (FRMAC). Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525. SAND2021-10713 O

Whitener, Dustin↗

Magnetic Detection of Chemical Threats

Los Alamos researchers have developed a technology to quickly detect chemical threats using a fieldable detector that provides real-time detection to ensure safety for warfighters, agricultural workers, and the general public. Traditional laboratory-based detection does not allow for agile response to threats on the battlefield or to our food supply chain. Our portable detector brings the laboratory to the field for real-time detection of chemical agents in samples without needing to send the samples to a remote location for analysis. This technology fits a market need in public safety, military sensor design, and pesticide detection. We have proven that this technology works on the benchtop, and are working to miniaturize the system to enable deployment. We are seeking qualified licensing or CRADA partners to finalize development of this system.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Financial Analysis of the 2019 Glen Canyon Dam Bug Flow Experiment

This report was prepared by Argonne National Laboratory (Argonne) in support of a financial analysis of the Glen Canyon Dam (GCD) flow experiment that was intended to support downstream macroinvertebrate production that are a primary food supply for fishes in the Colorado River. Also known as “bug flow” experiments, these experimental water releases were conducted on the weekends and holidays from the beginnings of May 2019 through the end of August 2019. This analysis was funded by the Colorado River Storage Project (CRSP) Office of the U.S. Department of Energy’s Western Area Power Administration (WAPA). CRSP markets electricity produced by hydroelectric facilities collectively known as the Salt Lake City Area Integrated Projects including dams equipped for power generation on the Colorado, Green, Gunnison, and Rio Grande Rivers and on Plateau Creek in the states of Arizona, Colorado, New Mexico, Utah, and Wyoming. Staff members in Argonne’s Energy Systems Division prepared this technical memorandum with assistance from WAPA’s CRSP and Energy Marketing and Management Offices (EMMO).

13 HYDRO ENERGY↗

Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) (Field Campaign Report)

The Arctic is rapidly changing, and these changes have substantial societal relevance. First, arctic change is a leading sign of global change, as the warming observed in the Arctic is 2-3 times faster than observed across the rest of the globe. This so-called arctic amplification is due to numerous feedbacks, including those linked to the declining sea ice. Broad arctic changes are also hypothesized to be related to shifts in large-scale circulation patterns that may have implications for mid-latitude weather and ocean circulation. Arctic change is further affecting the oceans through acidification that threatens food supplies. Declining sea ice also opens the Arctic for new resource development, shipping routes, tourism, and other commercial activities. Lastly, the changing Arctic is a hotbed for geopolitical challenges as nations vie for influence and control of this resource-rich and newly accessible region. Clearly the Arctic and its changes are playing a huge role in our Earth both from a geophysical and socio-political standpoint. To navigate, manage, and respond to the challenges associated with arctic change requires a vastly improved understanding of the coupled arctic system, and the drivers and implications of these changes. It is essential to better understand the physical basis for why the arctic sea ice is declining, the associated feedbacks that work to amplify or modulate this decline, and the myriad ways that the Earth system is responding. As a result of these changes and uncertainties, there are increasing societal needs for improved model predictive skill in the Arctic, to address pressing gaps in global climate prediction, to advance forecast skills for regional and hemispheric weather and sea ice, and to ensure robust ecosystem models that realistically link physical and biological systems. To fulfill these core needs requires new, sophisticated, and cross-cutting observations within the rapidly changing arctic ice pack.

54 ENVIRONMENTAL SCIENCES↗

Operation Upshot-Knothole

A thundering boom and sheet of fire announced a dramatic, once in a lifetime event – the firing of a nuclear projectile from a 280 mm cannon. Travelling seven miles downrange, the projectile detonated 500 feet over the Nevada Test Site’s Frenchman Flat with a force of fifteen kilotons. Although the test was successful, the massive cannon, designed for tactical battlefield use, had a critical flaw. It was too large and cumbersome for mobile combat. The cannon test, codenamed Grable, was part of Operation Upshot-Knothole, the fourth test series conducted in Nevada. Beginning with the Annie test on March 17, 1953, and concluding with the Climax test on June 4th, the Operation consisted of three airdrops, seven tower detonations, and the one artillery shot. As with previous Nevada tests, the demarcation between the weapon development series, Upshot, and the DOD effects tests, Knothole, was blurred. All eleven tests generated data in support of weapon development as well as tactical battlefield applications. During Upshot-Knothole, the University of California Radiation Laboratory (UCRL), conducted its first ever tests, Ruth and Ray. Although neither test was successful, these failures, along with another a year later at Operation Castle, provided the new laboratory with design data leading to future successful tests. The Federal Civil Defense Administration (FCDA) participated in a test series with the general goal of preparing for societal recovery from a nuclear attack. Known as Operation Doorstep, the FCDA’s experiments evaluated the effects of a nuclear attack on food supplies, housing and urban structures, and even a copse of trees transplanted from nearby Mt. Charleston. A contingent of the press witnessed test Annie from an outcropping of rocks, subsequently named News Nob. The presence of the news media, along with the FCDA’s participation, marked a fundamental change in the Nevada test program - a change that that now included the general populace, whose survival was, of course, the rationale for testing. The Department of Defense continued and expanded its Desert Rock exercises of troop exercises, helicopter operations, and evaluation of blast damage to military aircraft, tanks, and guns. Annie, Nancy, Badger, Simon, Encore, and Grable involved larger numbers of personnel than the other five shots. Below is an edited and condensed account of Desert Rock activities compiled by the Defense Threat Reduction Agency.

45 MILITARY TECHNOLOGY, WEAPONRY, AND NATIONAL DEF↗

Operation Teapot

As part of Operation Teapot, reporter Joan Collin came to the Nevada Test Site in early May 1955 to narrate a Federal Civil Defense Administration motion picture film on the explosive and radioactive effects of a nuclear detonation on food supplies, houses, communication systems, and energy sources. After watching efforts to feed the many people involved in test site activities, Collin asked the question of how to mass feed people after a nuclear attack. She was one of the few persons perceptive enough to recognize the significance of this issue.

99 GENERAL AND MISCELLANEOUS↗

Financial Analysis of the 2020 Macroinvertebrate Production Flow Experiment at Glen Canyon Dam

This report was prepared by Argonne National Laboratory (Argonne) in support of a financial analysis of the Glen Canyon Dam (GCD) flow experiment that was intended to support downstream macroinvertebrate production that are a primary food supply for fishes in the Colorado River. Also known as “bug flow” experiments, these experimental water releases were conducted on the weekends and holidays from the beginnings of May 2020 through the end of August 2020. This analysis was funded by the Colorado River Storage Project (CRSP) Office of the U.S. Department of Energy’s Western Area Power Administration (WAPA). CRSP markets electricity produced by hydroelectric facilities collectively known as the Salt Lake City Area Integrated Projects including dams equipped for power generation on the Colorado, Green, Gunnison, and Rio Grande Rivers and on Plateau Creek in the states of Arizona, Colorado, New Mexico, Utah, and Wyoming. Staff members in Argonne’s Energy Systems Division prepared this technical memorandum with assistance from WAPA’s CRSP and Energy Marketing and Management Offices (EMMO).

13 HYDRO ENERGY↗

Financial Analysis of the 2022 Macroinvertebrate Production Flow Experiment at Glen Canyon Dam

This report was prepared by Argonne National Laboratory (Argonne) in support of a financial analysis of the Glen Canyon Dam (GCD) flow experiment that was intended to support downstream macroinvertebrate production that are a primary food supply for fishes in the Colorado River. Also known as “bug flow” experiments, these experimental water releases were conducted on the weekends and holidays from the beginnings of May 2022 through the end of August 2022. This analysis was funded by and prepared for the Colorado River Storage Project (CRSP) Office of the U.S. Department of Energy’s Western Area Power Administration (WAPA). CRSP markets electricity produced by hydroelectric facilities collectively known as the Salt Lake City Area Integrated Projects including dams equipped for power generation on the Colorado, Green, Gunnison, and Rio Grande Rivers and on Plateau Creek in the states of Arizona, Colorado, New Mexico, Utah, and Wyoming. Staff members in Argonne’s Energy Systems and Infrastructure Analysis Division prepared this technical memorandum with assistance from WAPA’s CRSP and Energy Marketing and Management Offices (EMMO).

13 HYDRO ENERGY↗

Thermodynamic Constraints on Electromicrobial Protein Production

Global consumption of protein is projected to double by the middle of the 21st century. However, protein production is one of the most energy intensive and environmentally damaging parts of the food supply system today. Electromicrobial production technologies that combine renewable electricity and CO 2 -fixing microbial metabolism could dramatically increase the energy efficiency of commodity chemical production. Here we present a molecular-scale model that sets an upper limit on the performance of any organism performing electromicrobial protein production. We show that engineered microbes that fix CO 2 and N 2 using reducing equivalents produced by H 2 -oxidation or extracellular electron uptake could produce amino acids with energy inputs as low as 64 MJ kg −1 , approximately one order of magnitude higher than any previous estimate of the efficiency of electromicrobial protein production. This work provides a roadmap for development of engineered microbes that could significantly expand access to proteins produced with a low environmental footprint.

60 APPLIED LIFE SCIENCES↗