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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 91 records · Page 5

Climate-extreme modeling framework for sustainable flood management in the Arabian Peninsula

Evaluating extreme precipitation events (EPEs) is essential for building climate-resilient water management strategies, but it remains a major challenge in ungauged basins. Using the 26,070 km 2 Wadi al-Rummah basin in central Saudi Arabia as a case study, we developed an alternative, reliable, cost-effective satellite-based framework that combines empirically derived EPE thresholds, imagery-calibrated 2D hydrodynamic modeling, GRACE water-storage diagnostics, and bias-corrected CMIP6 projections to assess flood hazards and recharge potential under current and future climate scenarios in ungauged basins. The integrated approach and the resulting findings followed four key steps: (1) Identified a 22.5 mm EPE threshold, the 80th percentile of 3-day GPM/IMERG rainfall (2000–2024), aligned with flood-triggering events (Nov 2018: 23–28 mm; Apr, 2023: 42 mm); (2) Developed and calibrated a RiverFlow2D model using Sentinel-2 and PlanetScope imagery for the November 2018 flood, accurately reproducing flood depth and extent (RMSE ≤0.31 m; fuzzy-Dice ≥0.91), and estimating runoff (41 %), infiltration (25 %), and evaporation (34 %); (3) Independently validated the model with the April 2023 event (RMSE ≤0.35 m; fuzzy-Dice ≥0.86); (4) Conducted climate projections (2025–2100) from five bias-corrected NEX-GDDP CMIP6 models that revealed a 34 % increase in EPE intensity under SSP2-4.5 and 48 % under SSP5-8.5 scenarios, relative to 20th-century baselines. Our findings indicate that while intensifying extremes in the 21st century increase flood risk, the results highlight the potential for episodic recharge if effective retention strategies are employed, and offer a transferable model for climate-informed planning in data-scarce arid regions.

CMIP6↗

HIV drug resistance during antiretroviral therapy scale-up in Uganda, 2012–19: a population-based, longitudinal study

Background With scale-up of antiretroviral therapy (ART) in sub-Saharan Africa, increasing pretreatment HIV drug resistance has been reported; however, the broader effect of ART expansion on population-level resistance patterns remains insufficiently quantified. We aimed to estimate the longitudinal prevalence of drug resistance and resistance-conferring mutations. Methods This study used data collected as part of the Rakai Community Cohort Study (RCCS), an open population-based census and cohort study conducted in southern Uganda. At each survey round, residents aged 15–49 years are invited to participate and receive a structured questionnaire that obtains sociodemographic, behavioural, and health information, including self-reported past and current ART use. Voluntary HIV testing is conducted using a rapid test algorithm and a venous blood sample. People with HIV provide samples for viral load quantification and deep sequencing. We analysed RCCS survey, HIV viral load, and deep sequencing (which was used to predict resistance) data from five survey rounds. The key outcomes were the population prevalence of viraemic people with HIV with non-nucleoside reverse transcriptase inhibitor (NNRTI), nucleoside reverse transcriptase inhibitor (NRTI), protease inhibitor, or multiclass resistance among all participants (regardless of HIV serostatus) in the 2015 and 2017 surveys. Prevalence of class-specific resistance and resistance-conferring substitutions were estimated using robust log-Poisson regression. Findings Between Aug 10, 2011, and Nov 4, 2020, there were 43 361 participants in the RCCS and 7923 (18·27%) people with HIV. Over five survey rounds, 93 622 participant visits occurred, among which 17 460 (18·65%) were from people with HIV. Over the analysis period, the median age of study participants remained similar (28 years [22–35] in 2012 and 29 years [21–38] in 2019). Sufficient data were available to reliably genotype 4072 (90·03%) of 4523 participant visits from 3407 people with HIV for at least one drug. Overall population prevalence of resistance contributed by viraemic pretreatment people with HIV decreased between 2012 and 2017 from 0·56% (95% CI 0·42–0·75) to 0·25% (0·18–0·33) for NNRTI and from 0·24% (0·15–0·37) to 0·05% (0·02–0·10) for NRTI (prevalence ratio 0·44 [0·29–0·68] for NNRTI and 0·21 [0·09–0·47] for NRTI). Between 2012 and 2017, NNRTI resistance among viraemic pretreatment people with HIV increased from 4·86% (3·69–6·42) to 9·61% (7·27–12·7; prevalence ratio 1·98 [1·34–2·91]). The prevalence of NNRTI and NRTI resistance was substantially higher among viraemic treatment-experienced people with HIV (51·49% [46·24–57·34] for NNRTI and 36·46% [30·06–44·22] for NRTI in 2017) than among pretreatment people with HIV. NNRTI and NRTI resistance was predominantly attributable to rtK103N and rtM184V. inT97A was observed at a similar prevalence among viraemic treatment-experienced (9·96% [6·41–15·48]) and viraemic pretreatment (10·56% [8·01–13·93]) people with HIV; no major dolutegravir resistance mutations were observed. Interpretation Despite rising NNRTI resistance among pretreatment people with HIV, overall population prevalence of pretreatment HIV drug-resistant viraemia decreased due to increasing ART uptake and viral suppression. This finding underscores the crucial role of achieving and maintaining high ART coverage in reducing transmission of drug-resistant HIV. The high prevalence of mutations conferring resistance to components of first-line ART regimens among viraemic people with HIV is potentially concerning. Funding National Institutes of Health, Johns Hopkins University Center for AIDS Research, Bill & Melinda Gates Foundation, and the US Centers for Disease Control and Prevention.

59 BASIC BIOLOGICAL SCIENCES↗

Viruses infecting a warm water picoeukaryote shed light on spatial co-occurrence dynamics of marine viruses and their hosts

The marine picoeukaryote Bathycoccus prasinos has been considered a cosmopolitan alga, although recent studies indicate two ecotypes exist, Clade BI (B. prasinos) and Clade BII. Viruses that infect Bathycoccus Clade BI are known (BpVs), but not that infect BII. We isolated three dsDNA prasinoviruses from the Sargasso Sea against Clade BII isolate RCC716. The BII-Vs do not infect BI, and two (BII-V2 and BII-V3) have larger genomes (~210 kb) than BI-Viruses and BII-V1. BII-Vs share ~90% of their proteins, and between 65% to 83% of their proteins with sequenced BpVs. Phylogenomic reconstructions and PolB analyses establish close-relatedness of BII-V2 and BII-V3, yet BII-V2 has 10-fold higher infectivity and induces greater mortality on host isolate RCC716. BII-V1 is more distant, has a shorter latent period, and infects both available BII isolates, RCC716 and RCC715, while BII-V2 and BII-V3 do not exhibit productive infection of the latter in our experiments. Global metagenome analyses show Clade BI and BII algal relative abundances correlate positively with their respective viruses. The distributions delineate BI/BpVs as occupying lower temperature mesotrophic and coastal systems, whereas BII/BII-Vs occupy warmer temperature, higher salinity ecosystems. Accordingly, with molecular diagnostic support, we name Clade BII Bathycoccus calidus sp. nov. and propose that molecular diversity within this new species likely connects to the differentiated host-virus dynamics observed in our time course experiments. Overall, the tightly linked biogeography of Bathycoccus host and virus clades observed herein supports species-level host specificity, with strain-level variations in infection parameters.

59 BASIC BIOLOGICAL SCIENCES↗

Diversification of mandarin citrus by hybrid speciation and apomixis

The origin and dispersal of cultivated and wild mandarin and related citrus are poorly understood. Here, comparative genome analysis of 69 new east Asian genomes and other mainland Asian citrus reveals a previously unrecognized wild sexual species native to the Ryukyu Islands: C. ryukyuensis sp. nov. The taxonomic complexity of east Asian mandarins then collapses to a satisfying simplicity, accounting for tachibana, shiikuwasha, and other traditional Ryukyuan mandarin types as homoploid hybrid species formed by combining C. ryukyuensis with various mainland mandarins. These hybrid species reproduce clonally by apomictic seed, a trait shared with oranges, grapefruits, lemons and many cultivated mandarins. We trace the origin of apomixis alleles in citrus to mangshanyeju wild mandarins, which played a central role in citrus domestication via adaptive wild introgression. Our results provide a coherent biogeographic framework for understanding the diversity and domestication of mandarin-type citrus through speciation, admixture, and rapid diffusion of apomictic reproduction.

59 BASIC BIOLOGICAL SCIENCES↗

The microbiome of a bacterivorous marine choanoflagellate contains a resource-demanding obligate bacterial associate

Abstract Microbial predators such as choanoflagellates are key players in ocean food webs. Choanoflagellates, which are the closest unicellular relatives of animals, consume bacteria and also exhibit marked biological transitions triggered by bacterial compounds, yet their native microbiomes remain uncharacterized. Here we report the discovery of a ubiquitous, uncultured bacterial lineage we name Candidatus Comchoanobacterales ord. nov., related to the human pathogen Coxiella and physically associated with the uncultured marine choanoflagellate Bicosta minor . We analyse complete ‘Comchoano’ genomes acquired after sorting single Bicosta cells, finding signatures of obligate host-dependence, including reduction of pathways encoding glycolysis, membrane components, amino acids and B-vitamins. Comchoano encode the necessary apparatus to import energy and other compounds from the host, proteins for host-cell associations and a type IV secretion system closest to Coxiella’s that is expressed in Pacific Ocean metatranscriptomes. Interactions between choanoflagellates and their microbiota could reshape the direction of energy and resource flow attributed to microbial predators, adding complexity and nuance to marine food webs.

59 BASIC BIOLOGICAL SCIENCES↗

Respiration-driven methanotrophic growth of diverse marine methanogens

Anaerobic marine environments are the third largest producer of the greenhouse gas methane. The release to the atmosphere is prevented by anaerobic ‘methanotrophic archaea (ANME) dependent on a symbiotic association with sulfate-reducing bacteria or direct reduction of metal oxides. Metagenomic analyses of ANME are consistent with a reverse methanogenesis pathway, although no wild-type isolates have been available for validation and biochemical investigation. Herein is reported the characterization of methanotrophic growth for the diverse marine methanogens Methanosarcina acetivorans C2A and Methanococcoides orientis sp. nov. Growth was dependent on reduction of either ferrihydrite or humic acids revealing a respiratory mode of energy conservation. Acetate and/or formate were end products. In conclusion, reversal of the well-characterized methanogenic pathways is remarkably like the consensus pathways for uncultured ANME based on extensive metagenomic analyses.

59 BASIC BIOLOGICAL SCIENCES↗

Evaluating Recursive Blind Forecast Against API and Baseline: A Puerto Rican Case Study on Solar Irradiance for Normal and Extreme Weather

This paper leverages ongoing work in a community microgrid in Adjuntas, Puerto Rico to forecast global horizontal irradiance (GHI) and compare performance in normal and extreme weather. Given a positive correlation of 0.98 between GHI and PV power, forecasting GHI can be an effective, indirect forecast of photovoltaic (PV) power, especially in microgrids where the end-users, owners, operators, or other stakeholders are reluctant to share data for training or validation due to privacy and security concerns. A recursive one-shot (termed as "blind") forecast is, hence, formulated, wherein a gradient-boosted regression tree (GBR) is built to forecast GHI for a 7-day horizon in normal weather, and a 2-day horizon in extreme weather. To demonstrate its resilience, the architecture is trained on normal and hurricane weather GHI from 2002-2022. It is generalized on February 9-16, 2023, and on the landfall of Hurricane Nicole (Nov 4-5, 2022), respectively. Forecasts from GBR are compared against that from a satellite-based API resource and three baselines: persistence, averaging, and exponential smoothing. Results show GBR and persistence outperform sophisticated API in both types of weather for this case study.

Sundararajan, Aditya↗

DEPRECATED Hasty [SWR-20-80]

DEPRECATED This repository was archived by the owner on Nov 18, 2022. It is now read-only. The software is a web app to create semantic metadata models, namely, Haystack and Brick. The purpose of Hasty is to assist in the auditing of building mechanical systems and controls. The software is designed to capture mechanical system topology and important information regarding real world controls implementations. The tool is intended to output Brick / Haystack / ASHRAE 223 compliant models.

Mosiman, Cory↗

sup3ruhi (Super Resolution for Renewable Resource Data and Urban Heat Islands) [SWR-25-05]

Urban heat is a growing concern, particularly in dense metropolitan areas where high temperatures increase the risk of heat-related illness and drive energy expenses for cooling. Estimating the effects of urban heat remains a challenge due to limitations in describing the built environment, computational constraints, and the need for high-resolution data. This software presents open-source, computationally efficient machine learning methods that enhance the accuracy of urban temperature estimates compared to historical reanalysis data. Models trained using this software have been applied to urban microclimates in Los Angeles and Seattle showing greater accuracy and less bias when compared to low-resolution reanalysis datasets like ERA5 and even when compared to high-resolution mesoscale numerical weather models like WRF with an urban canopy model. Initial findings highlight how machine learning can support urban heat resilience planning by enabling improved assessments of local heat islands, mitigation strategies, and their energy implications. This software is an extension of (sup3r). This software supports the following publication: Buster, Grant, et al. Tackling Extreme Urban Heat: A Machine Learning Approach to Assess the Impacts of Climate Change and the Efficacy of Climate Adaptation Strategies in Urban Microclimates. arXiv:2411.05952, arXiv, 8 Nov. 2024. arXiv.org, https://doi.org/10.48550/arXiv.2411.05952. And has related public data records available at: Buster, Grant, Cox, Jordan, Benton, Brandon, and King, Ryan. Super-Resolution for Renewable Resource Data and Urban Heat Islands (Sup3rUHI). United States: N.p., 16 Oct, 2024. Web. https://data.openei.org/submissions/6220.

Buster, Grant [National Renewable Energy Laborator↗

EGS-Collab Experiment 1: Time-lapse ERT Data and E4D Inversion Files for 10-24-2018 through 11-07-2018 Flow Test

This data submission includes the raw time-lapse ERT (electrical resistivity tomography) monitoring data, flow system data, operator logs, E4D (https://e4d.pnnl.gov) inversion files, and meta-data necessary to reproduce the 4D ERT inversion for the Oct. 24 through Nov. 7 2018 post-stimulation flow test in test bed 1. The tests were done at the Sanford Underground Research Facility at Homestake Mine in South Dakota.

15 GEOTHERMAL ENERGY↗

Laboratory Drilling Test Data of PDC bits with Sierra White Granite Rock

This file contains unprocessed drilling data tests on Sierra White Granite (SWG) using two new PDC bits. The tests were conducted at Sandia National Laboratories (SNL) in the Hard Rock Drilling Facility (HRDF). The collected data includes ROP data at rotational speeds of 80, 120, and 160 RPMs, with incremental weight on bit (WOB) up to 5100 lbs. The diameter of the 4-bladed and 5-bladed PDC bits was 3 3/4" and supplied by National Oilwell Varco (NOV). Five tests modes were conducted for both bits, which are as follow: (1) Rigid configuration, with no vibration compliance (2) Flywheel configuration (3) Torsional compliance configuration (4) Axial Compliance configuration (5) Combined Axial and Torsional compliance configuration Note: the WOB and torque in the drilling data should be calibrated by zeroing the WOB and torque when the drill bit tags the rock sample.

15 GEOTHERMAL ENERGY↗

Wave Measurements taken NW of Culebra Is., PR, 2023

Wave and sea surface temperature measurements collected by a Sofar Spotter buoy in 2023. The buoy was deployed on July 27, 2023 at 11:30 UTC northwest of Culebra Island, Puerto Rico, (18.3878 N, 65.3899 W) and recovered on Nov 5, 2023 at 12:45 UTC. Data are saved here in netCDF format, organized by month, and include directional wave statistics, GPS, and SST measurements at 30-minute intervals. Figures produced from these data are provided here as well. They include timeseries of wave height/period/direction and SST, GPS location, wave roses, and directional spectra. Additionally, raw CSV files from the Spotter's memory card can also be found below. NetCDF files can be read in python using the netCDF4 or Xarray packages, or through MATLAB using the "ncread()" command.

16 TIDAL AND WAVE POWER↗

Lead isotopic compositions of airborne particulates collected from snow and from dry deposition in the East River Watershed, Colorado and at the Southern Sierra Critical Zone Observatory, California

The data set consists of lead (Pb) isotopic ratios (206Pb/207Pb and 208Pb/207Pb, as well as 206Pb/204Pb, 207Pb/204Pb, 208Pb/204Pb) for particulate samples collected from snow and dry deposition. This was part of a study (O’Day et al. 2020) that was looking at the speciation of phosphorous in splits of these samples to evaluate the flux and bio-availability of phosphorous to the mountain sites in the study. The Pb isotopic data allow sourcing of long-range transported Pb, specifically the fraction of Pb sourced in Asia, and so a comparison of the relative distances of PM sources between the high and low elevation sites. Samples were collected at the East River Watershed, CO (dry deposition collected over Sept.-Oct. 2016, show sampling winter 2017) and at the Southern Sierra Critical Zone Observatory (dry deposition collected over Sept-Nov 2016, July-Sept 2017, June-July 2017). The data includes Pb concentration data, as well as calculated fraction of the Pb sourced in Asia. This data set was published in part in O’Day et al. (2020) Phosphorus Speciation in Atmospherically Deposited Particulate Matter and Implications for Terrestrial Ecosystem Productivity. ES&T, https://dx.doi.org/10.1021/acs.est.9b06150

54 ENVIRONMENTAL SCIENCES↗

Data for "Depth of nutrient uptake by deep-rooted plants is regulated by water availability"

The data set consists of strontium (Sr) isotope ratios (87Sr/86Sr), water isotopes, soil cation concentrations, soil water potential sensor data, and results of 87Sr/86Sr mixing model. The plant canopy size files include the dataset of canopy dimension of sagebrush, lupine, and sunflower. The soil and plant ICPMS (Inductively Coupled Plasma Mass Spectrometry) data file includes both of 87Sr/86Sr, and cation concentration dataset from soil exchangeable pool, apatite pool, silicate extract, atmospheric rain deposition, and plant leaf and stem tissues. The plant dendrochronology file includes the dendrochronogical ring width of several sagebrush, and dendrochemical sample data includes the 87Sr/86Sr for each separated growth ring. The modeling result gives the proportion of nutrient sources of each plants (based on their 87Sr/86Sr in leaf tissues and growth rings) from atmospheric deposition and mineral weathering. Soil water potential data includes continuous collection of soil water potential dataset at 2 depths (30 cm and 60 cm, from Nov 24 - Jun 25) of the sampling site. All the samples were collected from 2 sampling campaign June and July 2023, and rain water is a separate sampling from Aug - Sept 2023, at north-facing hillslope near pumphouse site. The data showed that the depth of cation nutrient acquisition is thus tightly coupled with, and likely determined by, water availability in soil, saprolite and bedrock. The enhanced uptake of cations and water from regions of mineral weathering could confer plant and ecosystem resilience during low water years and may impact the rate of bedrock weathering and watershed chemistry during drought. This dataset includes a file-level metadata (flmd.csv) file that lists each file contained in the dataset with associated metadata; a data dictionary (dd.csv) file that contains column/row headers used throughout the files along with a definition, units, and data type; a location metadata file (locations.csv); and a samples metadata file (samples.csv). All files are provided as comma-separated values (CSV) files (.csv). This work was supported by the Watershed Function Science Focus Area at Lawrence Berkeley National Laboratory funded by the US Department of Energy, Office of Science, Biological and Environmental Research under Contract No. DE-AC02-05CH11231.

54 ENVIRONMENTAL SCIENCES↗

Real-Time Drilling Optimization System for Improved Overall Rate of Penetration and Reduced Cost Per Foot in Geothermal Drilling

The key to success in geothermal drilling is economic feasibility, and a major cost in the development of geothermal resources is the actual drilling of the wells. In this project, a real-time drilling optimization system for geothermal drilling was developed. The system couples three individual components while drilling. The first component is a drill stem vibration analysis model, the second is Mechanical Specific Energy (MSE) analyses, and the third is a detailed PDC Rate of Penetration (ROP) drill bit model for optimum RPM and WOB combinations. The benefit of the coupled system is that the range of WOB and RPM could be selected to avoid drill stem vibrations. Secondly, MSE is used as an efficiency measure and the detailed PDC drill bit model ensures the drill bit does not endure temperatures that exceed the temperature at which the PDC cutters experience accelerated wear. The new detailed PDC bit model is based on rock/bit interaction that physically tracks the PDC cutter wear flats as the bit drills ahead giving the capability to calculate the temperature being generated underneath the worn cutters to better advise on operational parameters to avoid accelerated cutter wear and failure and to ensure that operational parameters are applied so that overall ROP is maximized. By combining the drill stem vibrations and the detailed PDC bit cutter wear and “safe” non-accelerated cutter wear temperature and optimum ranges of operating parameters, it results in higher ROP and lower cost drilling. Single cutter PDC testing performed in different lithologies at Sandia was utilized to verify the PDC cutter forces and depth of cut for new and worn cutters. Based on single cutter PDC temperature modeling, verification using single cutter data from the testing done by National Oilwell Varco (NOV) was performed. Sandia’s Hard-Rock Drilling Facility (HRDF) was utilized to test different drill bit configurations with different cutter designs and wear status with different induced modes of vibration to obtain the critical bit RPM/WOB ranges resulting in ineffective drilling and low ROP. The collected test data were further used to verify and calibrate the full hole PDC ROP model that was developed based on single cutter interaction data. A full coupled drill stem vibration model was formulated and verified with geothermal field data from the Chocolate Mountain Aerial Gunnery Range (CMAGR). A graphical user interface (GUI) was developed using Tkinter library in the computer programming language Python, which integrates all the developed models in one system. The developed system consists mainly of the PDC ROP model, PDC bit wear model, PDC cutter temperature model, Mechanical Specific Energy (MSE) model, and drillstring vibration model integrated into one system. The developed system can be used for both, post well analysis and real-time optimization using different criteria such as ROP maximization or MSE minimization. The software uses Differential Evolution Algorithm (DEA) to find optimum values for operational parameters based on last foot drilled while avoiding the drillstring vibration and cutter temperature critical operating parameters.

15 GEOTHERMAL ENERGY↗

Experimental demonstration of OSC at IOTA: IOTA Run #3 (Report)

Optical Stochastic Cooling (OSC) is an optical-bandwidth extension of Stochastic Cooling that could advance the state-of-the-art cooling rate in beam cooling by three to four orders of magnitude. The concept of OSC was first suggested in the early 1990s by Zolotorev, Zholents and Mikhailichenko, and replaced the microwave hardware of SC with optical analogs, such as wigglers and optical amplifiers. A number of variations on the original OSC concept have been proposed, and while a variety of proof-of-principle demonstrations and operational uses have been considered, the concept was not experimentally demonstrated up to now. An OSC R&D program has been underway at IOTA for the past several years. Run #3 of the IOTA ring, which began in Nov. 2020 and concluded in Aug. 2021, was focused on the world’s first experimental demonstration of OSC. The experimental program was successful in demonstrating and characterizing the OSC physics with the major outcomes including strong cooling in one, two and three dimensions, validation of the theoretical models of OSC and the demonstration of OSC with a single electron. This report briefly describes the activities and major milestones of the OSC program during Run #3.

42 ENGINEERING↗

Fundamental Studies of Complex Oxides and Their Interfaces

This is a final close-out report for DOE contract DE-FG02-00ER45818 entitled “Fundamental Studies of Complex Oxides and their Interfaces” at the University of Missouri, Columbia, Missouri. It funded research in Condensed Matter Physics Basic Energy Science from July 1, 2000 through Nov 30, 2022. Presented below are: (i) An overview of the research accomplishments during the entire grant period with highlights of research results from the last funding period, (ii) A list of postdocs and graduate students that received support from this grant, and (iii) A list of original papers published through the duration of the grant with impact factor metrics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗