Source Levels of In‐Cloud Air in Shallow Cumulus: Consistency Between Paluch Diagram and Lagrangian Particle Tracking
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54 ENVIRONMENTAL SCIENCES↗
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The gravity extension for MCNP 6.2
Standard MCNP particle tracking takes place along straight-line trajectories from interaction point to interaction point. There is a feature within MCNP that is planned for deprecation that provides surface boundary conditions for approximating gravity for planetary cases, but this feature is not applicable to a cold neutron beam. A new extension has been developed to track particles along parabolic trajectories with a constant acceleration. MCNP contains 1st and 2nd-order surfaces as well as a special case of 4th-order surfaces for simple tori, and the intersection of parabolic trajectories with these surfaces becomes 2nd, 4th, and 8th-order equations in time, respectively. Solving these equations utilizes a fast algorithm for finding the roots of polynomials. Finally, the theory, MCNP input card, and examples of using this new feature will be discussed.
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
Leveraging Topological Events in Tracking Graphs for Understanding Particle Diffusion
Abstract Single particle tracking (SPT) of fluorescent molecules provides significant insights into the diffusion and relative motion of tagged proteins and other structures of interest in biology. However, despite the latest advances in high‐resolution microscopy, individual particles are typically not distinguished from clusters of particles. This lack of resolution obscures potential evidence for how merging and splitting of particles affect their diffusion and any implications on the biological environment. The particle tracks are typically decomposed into individual segments at observed merge and split events, and analysis is performed without knowing the true count of particles in the resulting segments. Here, we address the challenges in analyzing particle tracks in the context of cancer biology. In particular, we study the tracks of KRAS protein, which is implicated in nearly 20% of all human cancers, and whose clustering and aggregation have been linked to the signaling pathway leading to uncontrolled cell growth. We present a new analysis approach for particle tracks by representing them as tracking graphs and using topological events – merging and splitting, to disambiguate the tracks. Using this analysis, we infer a lower bound on the count of particles as they cluster and create conditional distributions of diffusion speeds before and after merge and split events. Using thousands of time‐steps of simulated and in‐vitro SPT data, we demonstrate the efficacy of our method, as it offers the biologists a new, detailed look into the relationship between KRAS clustering and diffusion speeds.
McDonald, T.↗
A Method to Represent a Well in a Three‐Dimensional Discrete Fracture Network Model
Abstract In discrete fracture network (DFN) modeling, fractures are randomly generated and placed in the model domain. The rock matrix is considered impermeable. Small fractures and isolated fractures are often ignored to reduce computational expense. As a result, the rock matrix between fractures could be large and intersections may not be found between a well introduced in the model and the hydraulically connected fracture networks (fracture backbones). To overcome this issue, this study developed a method to conceptualize a well in a three‐dimensional (3D) DFN using two orthogonal rectangular fractures oriented along the well's axis. Six parameters were introduced to parameterize the well screen and skin zone, and to control the connectivity between the well and the fracture backbones. The two orthogonal fractures were discretized using a high‐resolution mesh to improve the quality of flow and transport simulations around and along the well. The method was successfully implemented within dfnWorks 2.0 (Hyman et al. 2015) to incorporate a well in a 3D DFN and to track particles leaving an injection well and migrating to a pumping well. Verification of the method against MODFLOW/MODPATH found a perfect match in simulated hydraulic head and particle tracking. Using three examples, the study showed that the method ensured the connectivity between wells and fracture backbones, and honored the physical processes of flow and transport along and around wells in DFNs. Recommendations are given for estimating the values of the six introduced well parameters in a real‐world case study.
Pham, Hai (ORCID:0000000310164394)↗
Laser calibration system at ProtoDUNE-HD
The Deep Underground Neutrino Experiment (DUNE) is a full experiment consisting of multiple detectors separated by a near and far site. DUNE will study long-baseline neutrino oscillations, which will provide insight into CP-violation, neutrino mass ordering, and the matter/antimatter asymmetry. Additionally, DUNE will search for nucleon decay and observe neutrinos from supernovae. DUNE relies on liquid argon time projection chambers (LAr TPCs), an excellent technology for tracking particles and reconstructing their interactions with high precision. To achieve its goals, DUNE is supported by the ProtoDUNE experiments at CERN, which serve as large-scale prototypes to validate detector technologies and calibration systems. The precise calibration of the electric field within the detector is vital for accurate 3D reconstruction of particle tracks, particularly in maintaining the consistency of charge measurements along the drift path. This work presents the development and implementation of a laser calibration system designed for ProtoDUNE-II. This poster involved the physical installation and commissioning of the laser system. The commissioning process included extensive testing to ensure alignment and operational efficiency, such as rotating the laser to observe behavior of tracks. The groundwork established during these steps is crucial for future data analysis, aiming to measure the electron lifetime (in the active volume) and map the electric field inside the detector with high precision.
Campanelli, Wallison [LIP]↗
3D tracking of particles in a dusty plasma by laser sheet tomography
The collective behavior of levitated particles in a weakly ionized plasma (dusty plasma) has raised significant scientific interest. This is due to the complex array of forces acting on the particles and their potential to act as in situ diagnostics of the plasma environment. Ideally, the three-dimensional (3D) motion of many particles should be tracked for long periods of time. Typically, stereoscopic imaging using multiple cameras combined with particle image velocimetry is used to obtain a velocity field of many particles, yet this method is limited by its sample volume and short time scales. Here, we demonstrate a different, high-speed tomographic imaging method capable of tracking individual particles. We use a scanning laser sheet coupled to a single high-speed camera. We are able to identify and track tens of individual particles over centimeter length scales for several minutes, corresponding to more than 10 000 frames.
Physics↗
ML Track Fitting in Nuclear Physics
Charged particle tracking represents the largest consumer of CPU resources in high data volume Nuclear Physics (NP) experiments. An effort is underway to develop machine learning (ML) networks that will reduce the resources required for charged particle tracking. Tracking in NP experiments represent some unique challenges compared to high energy physics (HEP). In particular, track finding typically represents only a small fraction of the overall tracking problem in NP. This presentation will outline the differences and similarities between NP and HEP charged particle tracking and areas where ML learning may provide a benefit. The status of the specific effort taking place at Jefferson Lab will also be shown.
Britton, Thomas↗
Critical analysis of velocimetry methods for particulate flows from synthetic data
Particle tracking methods that extract high-fidelity particle velocity data from high speed video of particle laden flows is a common experimental technique applied to chemical processes. These measurements are used to better understand the motion of particles and fluids in complex systems and create data against which computational models are validated. However, the methods, codes, and experimental setups all have limitations. It is imperative that practitioners verify the methods and their implementation as well as understand the limitations of experimental setups. This work focuses on quantifying the visible depth of field in a high particle concentration fluidized bed. Following a precedent set by the particle imaging velocimetry community, a particle velocity field is manufactured using a computational fluid dynamics and discrete element method simulation. Photo realistic high-speed videos are rendered based on the simulated data using the three-dimensional creation software Blender. Particle velocities are extracted from the synthetic high-speed videos using three variants of Particle Tracking Velocimetry and Optical Flow Velocimetry methodologies. Here, the tracked results are then compared to the known solution, quantifying the error associated with the assumed visible depth. The results indicate that at depth of one particle diameter, all three particle tracking codes give accurate measurements, largely within 5%. However, the error increases when the full bed video measurements are compared to the known solution at one particle diameter, i.e., mimicking a validation study. Finally, for some statistics the constant depth assumption only increases the error slightly, for others significantly.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Hardware-Accelerated Ray Tracing of CAD-Based Geometry for Monte Carlo Radiation Transport
Monte Carlo radiation transport (MCRT) methods have been used to simulate radiation environments for many decades by tracking individual particles through a model to accumulate statistical information. MCRT geometry is historically formed using the constructive solid geometry (CSG). Recently, significant work has been performed to support simulations using computer-aided design (CAD)-based tessellated surfaces to support highly complex geometries. Ray tracing acceleration data structures from the rendering and visualization community are applied to accelerate particle tracking in CAD-based models. Despite these efforts, CSG representations provide the superior performance in surface intersection operations during particle flight. Concurrently, pseudo Monte Carlo methods have become prevalent in rendering applications to support more realistic models for scattering media, motivating innovations that are advantageous for MCRT simulations. Finally, the authors’ work extends these innovations by employing Intel’s Embree ray tracing kernel within a geometry toolkit for Monte Carlo to improve the simulation performance using CAD-based models by factors of 1.5 to 2.
42 ENGINEERING↗
Novel challenges in tracking self-interacting dark matter subhalos
Cosmological N-body simulations are among the primary tools for studying structure formation in the Universe. Analyses of these simulations critically depend on accurately identifying and tracking dark matter subhalos over time. In recent years, several new algorithms have been developed to improve the accuracy and consistency of subhalo tracking in cold dark matter (CDM) simulations. These algorithms should be revisited in the context of new physics beyond gravity, which can modify the evolution and final properties of subhalo populations. In this work, we apply the particle-tracking-based subhalo finder Symfind to velocity-dependent self-interacting dark matter (SIDM) simulations with large cross section amplitudes to assess the performance of particle-tracking methods beyond the CDM paradigm. We find that the core-particle-tracking technique, which is key to the success of these algorithms in CDM, does not always yield accurate results in SIDM. In particular, the interplay between dark matter self-interactions and tidal stripping can cause the diffusion of core particles to larger radii, leading particle-tracking-based algorithms to prematurely lose track of SIDM subhalos. For massive core-expansion subhalos and core-collapse subhalos that experience close or repeated pericentric passages, a significant fraction of core particles can be lost, and particle-tracking-based finders such as Symfind offer no clear advantage over traditional methods that rely on identifying phase-space overdensities. On the other hand, for subhalos with large pericentric distances or fewer, more distant passages, Symfind tends to outperform. These differences depend sensitively on the cross section amplitude and turnover velocity of the underlying SIDM model. We therefore recommend a hybrid approach that leverages the strengths of both techniques to produce complete and robust catalogs of core-expansion and core-collapse SIDM subhalos.
cosmological simulations↗
High throughput automated characterization of enamel microstructure using synchrotron tomography and optical flow imaging
The remarkable damage-tolerance of enamel has been attributed to its hierarchical microstructure and the organized bands of decussated rods. A thorough characterization of the microscale rod evolution within the enamel is needed to elucidate this complex structure. While prior efforts in this area have made use of single particle tracking to track a single rod evolution to various degrees of success, such a process can be both computationally and labor intensive, limited to the evolution path of a single rod, and is therefore prone to error from potentially tracking outliers. Particle image velocimetry (PIV) is a well-established algorithm to derive field information from image sequences for processes that are time-dependent, such as fluid flows and structural deformation. In this work, we demonstrate the use of PIV in extracting the full-field microstructural distribution of rods within the enamel. Further, enamel samples from a wild African lion were analyzed using high-energy synchrotron X-ray micro-tomography. Results from the PIV analysis provide sufficient full-field information to reconstruct the growth of individual rods that can potentially enable rapid analysis of complex microstructures from high resolution synchrotron datasets. Such information can serve as a template for designing damage-tolerant bioinspired structures for advanced manufacturing.
36 MATERIALS SCIENCE↗
Measurement of flow properties coupled to experimental and numerical analyses of dense, granular flows for solar thermal energy storage
Granular flows of sintered bauxite proppants were researched along an inclined plane for solar thermal energy storage applications. Granular flow properties needed to drive numeric granular models were measured for improved numerical model predictions for Carbobead CP 50/140, 40/100, and 30/60 particles. Particle shape and size distributions were determined by coupling optical microscopy to an in-house image processing algorithm. The impulse excitation technique was used to measure elastic and shear moduli, and compute Poisson’s ratio. The coefficient of static sliding friction was measured using the slip-stick method, and the static rolling friction was determined from measured shear on particles positioned between two hot-pressed plates. The coefficient of restitution was measured by dropping particles on a surface and determining the kinetic energy before and after impact with the surface using high resolution particle tracking velocimetry. Particle size did not significantly impact the coefficients of restitution and static rolling friction, however, particle shape distribution resulted in a large variation in measurements. An inclined flow experiment was performed to characterize granular flows of Carbobead CP 30/60 particles using particle image velocimetry. Numerical models of the experiment using discrete element method were generated with the measured mechanical properties as inputs for comparison with experimental results. A constant directional torque rolling friction model best predicted bulk granular flow behavior. Furthermore, good agreement between the model and experiment was achieved at ambient, steady state conditions, with average velocity differences <10%.
14 SOLAR ENERGY↗
Particle Size and Density Measurement
This project has developed a miniature gravity settling classifier (flow cell) and flow system that separates slurry particles by settling rate into six different Cuts. The settling rates for particles in each Cut were determined from COMSOL computational fluid dynamics (CFD) modeling of the flow in the flow cell together with particle tracking for particles of differing settling rates. For particles collected in each Cut, the particle concentration and size distribution were measured. The effective particle densities from each Cut are calculated from their respective CFD modeled settling rates using a relationship between the unhindered settling rate, particle size distribution (PSD), and effective density. The particle size and density distribution (PSDD) of the slurry sample is then calculated by combining the size and density distributions determined for the particles collected in each of the settling rate Cuts.
12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
Track reconstruction as a service for collider physics
Optimizing charged-particle track reconstruction algorithms is crucial for efficient event reconstruction in Large Hadron Collider (LHC) experiments due to their significant computational demands. Existing track reconstruction algorithms have been adapted to run on massively parallel coprocessors, such as graphics processing units (GPUs), to reduce processing time. Nevertheless, challenges remain in fully harnessing the computational capacity of coprocessors in a scalable and non-disruptive manner. This paper proposes an inference-as-a-service approach for particle tracking in high energy physics experiments. To evaluate the efficacy of this approach, two distinct tracking algorithms are tested: Patatrack, a rule-based algorithm, and Exa.TrkX, a machine learning-based algorithm. The as-a-service implementations show enhanced GPU utilization and can process requests from multiple CPU cores concurrently without increasing per-request latency. The impact of data transfer is minimal and insignificant compared to running on local coprocessors. This approach greatly improves the computational efficiency of charged particle tracking, providing a solution to the computing challenges anticipated in the High-Luminosity LHC era.
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
Nanoparticle Tracking to Probe Transport in Porous Media
From the granular and fractured subsurface environment to highly engineered polymer membranes used in pharmaceutical purification, porous materials are ubiquitous in nature and industrial applications. In particular, porous media are used extensively in processes including water treatment, pharmaceutical sterilization, food/beverage processing and heterogeneous catalysis, where hindered mass transport is either essential to the process or a necessary, but undesirable limitation. Unfortunately, there are currently no universal models capable of predicting mass transport based on a description of the porous material because real porous materials are complex, and because many coupled dynamic mechanisms (e.g. adsorption, steric effects, hydrodynamic effects, electrostatic interactions, etc.) give rise to the observed macroscopic transport phenomena. While classical techniques, like nuclear magnetic resonance and dynamic light scattering, provide useful information about mass transport in porous media at the ensemble level, they provide limited insight into the microscopic mechanisms that give rise to complex phenomena such as anomalous diffusion, hindered pore-space accessibility, and unexpected retention under flow, among many others. To address this issue, we have developed refractive index matching imaging systems, combined with single-particle tracking methods, allowing the direct visualization of single particle motion within a variety of porous materials. Here, we summarize our recent efforts to advance the understanding of nanoparticle transport in porous media using single-particle tracking methods in both fundamental and applied scenarios. First, we describe the basic principles for two-dimensional and three-dimensional single-particle tracking in porous materials. Then, we describe concrete examples of nanoparticle transport in porous materials from two perspectives: (1) understanding fundamental elementary particle transport processes in porous media, including pore accessibility and cavity escape, which limit transport in porous media; (2) facilitating applications in industrial processes, e.g. by understanding the mechanisms of particle fouling and remobilization in filtration membranes. Finally, we provide an outlook of opportunities associated with investigating other types of mass transport in confined environments using single-particle tracking methods, including electrophoretic and self-propelled motion.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Novel indium phosphide charged particle detector characterization with a 120 GeV proton beam
Thin film detectors which incorporate semiconductor materials other than silicon have the potential to build upon their unique material properties and offer advantages such as faster response times, operation at room temperature, and radiation hardness. To explore the possibility, promising candidate materials were selected, and particle tracking detectors were fabricated. An indium phosphide detector with a metal-intrinsic-metal structure has been fabricated for particle tracking. The detector was tested using radioactive sources and a high energy proton beam at Fermi National Accelerator Laboratory. In addition to its simplistic design and fabrication process, the indium phosphide particle detector showed a very fast response time of hundreds of picoseconds for the 120 GeV protons, which are comparable to the ultra-fast silicon detectors. This fast-timing response is attributed to the high electron mobility of indium phosphide. Such material properties can be leveraged to build novel detectors with superlative performance.
47 OTHER INSTRUMENTATION↗
Modeling and implementation of vertical excursion FFA in the Zgoubi ray-tracing code
Vertical Fixed Field Accelerators (vFFAs) feature complex and highly non-linear magnetic fields, which require simulation codes allowing step-wise particle tracking. Methods to model the 3D magnetic field of scaling vFFAs have been developed in the ray-tracing code Zgoubi. The field modeling and particle tracking methods include the field non-linearities, the fringe fields, and the field superposition of neighboring magnets. The procedure implements the vFFA analytical field expressions, allowing design studies and parameter optimizations using the Zgoubi built-in fit method. The vFFA procedure has been applied to a ten-fold symmetry ring with a triplet focusing structure designed to accelerate protons from 3 MeV to 12 MeV and studied under the ISIS-II proton driver prototype project. Results from particle tracking in externally generated 3D semi-analytical field maps and the developed vFFA analytical model are shown to be in excellent agreement.
43 PARTICLE ACCELERATORS↗
Plasma electron hole kinematics. Hole tracking Particle-In-Cell simulation
The kinematics of a 1-D electron hole is studied using a novel Particle-In-Cell simulation code. A hole tracking technique enables us to follow the trajectory of a fast-moving solitary hole and study quantitatively hole acceleration and coupling to ions. We observe a transient at the initial stage of hole formation when the hole accelerates to several times the cold-ion sound speed. Artificially imposing slow ion speed changes on a fully formed hole causes its velocity to change even when the ion stream speed in the hole frame greatly exceeds the ion thermal speed, so there are no reflected ions. The behavior that we observe in numerical simulations agrees very well with our analytic theory of hole momentum conservation and the effects of “jetting.”
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗